AT2G43850

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
18159182 .. 18162250
3069 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G43850.3

Sequence Viewer

Length: 1440 bp
ATGGAGAACATAACCGCGCAGCTCAAACGAGGTATCTCAAGACAATTCTCAACTGGTTCGATTCGTCGAACATTGAGCCGACAGTTCACGCGTCAGTCATCTCTTGACCCTCGTAGGACCAACATGAGGTTTAGTTTCGGTCGTCAGTCTTCTCTCGATCCGATCAGGAGGAGTCCTGATTCTTCCAAGAGTGATGACGAGCCACATATGTCGGTACCGGAGAATCTCGATTCGACGATGCAGCTTCTCTTTATGGCTAGCAAAGGTGATGTCAGAGGAATCGAGGAGCTTCTTGACGAAGGAATTGATGTTAATAGCATCGATCTTGATGGCCGGACGGCGCTTCACATCGCCGCTTGTGAGGGACATCTTGGTGTCGTTAAGGCTCTTCTTAGCCGGAGAGCTAACATTGATGCTCGTGATCGATGGGGAAGTACGGCGGCTGCTGATGCAAAGTACTATGGGAATTTAGATGTTTACAATCTCTTGAAGGCTCGAGGAGCTAAAGTTCCGAAAACTAGGAAGACTCCGATGACTGTGTCGAATCCACGAGAAGTTCCTGAGTATGAGCTTAATCCACTTGAGGTTCAAGTCAGGAAATCTGATGGCATCTCAAAGGGAGCATATCAAGTAGCTAAATGGAATGGCACGCGGGTTTCAGTCAAAATACTTGATAAAGATAGTTACTCAGACCCGGAACGCATAAACGCATTTAGACATGAATTGACGTTGCTAGAAAAAGTCCGGCATCCAAATGTTATCCAGTTTGTTGGAGCTGTCACTCAGAATATACCGATGATGATTGTAGTCGAGTATAATCCGAAAGGAGATTTAAGTGTATATCTCCAAAAGAAAGGACGTCTTTCTCCATCCAAGGCACTTAGATTTGCTCTTGATATTGCCAGAGGCATGAACTACCTCCATGAATGTAAACCAGATCCAATCATTCACTGTGATCTAAAGCCAAAAAATATTTTGCTGGATAGAGGAGGGCAATTAAAGATCTCAGGATTTGGTATGATAAGATTGTCGAAAATTTCACAAGACAAGGCGAAAGTAGCAAACCACAAAGCACATATAGATCTCTCTAATTACTACATTGCACCAGAGGTTTATAAAGACGAAATATTCGACCTAAGGGTTGATGCACACTCCTTTGGTGTCATTTTATACGAGATAACAGAGGGAGTACCAGTTTTCCATCCGAGACCTCCTGAAGAAGTTGCGAGAATGATGTGCTTAGAAGGAAAGAGACCTGTATTCAAAACTAAGTCAAGAAGTTACCCTCCAGATATAAAAGAGTTGATCGAGAAATGTTGGCATCCAGAAGCGGGTATTAGACCGACATTCTCTGAAATTATTATTCGACTTGACAAAATAGTAGCAAATTGCTCTAAACAAGGATGGTGGAAAGACACATTCAAGTTCCCTTGGAAATAA

Protein Analysis

479

Amino Acids

54.41

Weight (kDa)

9.45

Isoelectric Point (pI)

45.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 83 - 171 5.4e-13 Ankyrin repeats (3 copies)
Ank_4 PF13637 86 - 131 7.5e-07 Ankyrin repeats (many copies)
Ank_5 PF13857 97 - 147 4.3e-08 Ankyrin repeats (many copies)
Ank PF00023 110 - 142 9.2e-10 Ankyrin repeat
PK_Tyr_Ser-Thr PF07714 205 - 456 1.3e-48 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 211 - 454 5.5e-43 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1116
AatII GACGTC 1 cut(s) 862
Acc65I GGTACC 1 cut(s) 214
AccB1I GGYRCC 1 cut(s) 214
AccII CGCG 3 cut(s) 17, 91, 652
AciI CCGC 5 cut(s) 15, 354, 440, 652, 1331
AclWI GGATC 2 cut(s) 152, 932
AcoI YGGCCR 1 cut(s) 331
AcsI RAATTY 2 cut(s) 466, 1035
AcuI CTGAAG 1 cut(s) 1236
AcyI GRCGYC 1 cut(s) 859
AfaI GTAC 4 cut(s) 216, 436, 458, 1191
AfiI CCNNNNNNNGG 2 cut(s) 126, 1331
AflIII ACRYGT 1 cut(s) 89
AgsI TTSAA 4 cut(s) 490, 590, 1264, 1423
AloI GAACNNNNNNTCC 2 cut(s) 492, 524
AluBI AGCT 8 cut(s) 22, 244, 289, 404, 503, 571, 635, 776
AluI AGCT 8 cut(s) 22, 244, 289, 404, 503, 571, 635, 776
Alw26I GTCTC 2 cut(s) 1201, 1246
AlwI GGATC 2 cut(s) 152, 932
Ama87I CYCGRG 1 cut(s) 495
AoxI GGCC 1 cut(s) 331
ApeKI GCWGC 3 cut(s) 19, 241, 443
ApoI RAATTY 2 cut(s) 466, 1035
ArsI GACNNNNNNTTYG 4 cut(s) 255, 287, 1112, 1144
Asp718I GGTACC 1 cut(s) 214
AspLEI GCGC 2 cut(s) 19, 343
AspS9I GGNCC 1 cut(s) 117
AsuC2I CCSGG 1 cut(s) 695
AsuHPI GGTGA 1 cut(s) 278
AsuNHI GCTAGC 1 cut(s) 257
AvaI CYCGRG 1 cut(s) 495
AvaII GGWCC 1 cut(s) 117
AxyI CCTNAGG 1 cut(s) 1136
BanI GGYRCC 1 cut(s) 214
BauI CACGAG 2 cut(s) 417, 549
BbsI GAAGAC 2 cut(s) 141, 530
BbvI GCAGC 3 cut(s) 31, 253, 430
BccI CCATC 6 cut(s) 323, 420, 599, 877, 1209, 1398
BceAI ACGGC 2 cut(s) 354, 453
BcnI CCSGG 1 cut(s) 695
BcoDI GTCTC 2 cut(s) 1201, 1246
BfaI CTAG 3 cut(s) 258, 519, 734
BfoI RGCGCY 1 cut(s) 344
BglII AGATCT 2 cut(s) 1002, 1081
BisI GCNGC 5 cut(s) 20, 242, 354, 441, 444
BlsI GCNGC 5 cut(s) 21, 243, 355, 442, 445
BmcAI AGTACT 1 cut(s) 458
Bme1390I CCNGG 1 cut(s) 695
Bme18I GGWCC 1 cut(s) 117
BmeT110I CYCGRG 1 cut(s) 495
BmgT120I GGNCC 1 cut(s) 117
BmiI GGNNCC 1 cut(s) 216
BmrFI CCNGG 1 cut(s) 695
BmsI GCATC 8 cut(s) 228, 327, 403, 439, 618, 757, 1135, 1330
BmtI GCTAGC 1 cut(s) 261
BpiI GAAGAC 2 cut(s) 141, 530
BpmI CTGGAG 1 cut(s) 1272
BpuEI CTTGAG 2 cut(s) 22, 602
BpuMI CCSGG 1 cut(s) 695
Bsa29I ATCGAT 2 cut(s) 321, 424
BsaHI GRCGYC 1 cut(s) 859
BsaI GGTCTC 2 cut(s) 1201, 1246
BsaJI CCNNGG 2 cut(s) 873, 1430
BsaWI WCCGGW 1 cut(s) 217
BsaXI ACNNNNNCTCC 4 cut(s) 492, 522, 1179, 1209
Bsc4I CCNNNNNNNGG 2 cut(s) 126, 1331
Bse1I ACTGG 3 cut(s) 58, 763, 1193
Bse21I CCTNAGG 1 cut(s) 1136
Bse3DI GCAATG 1 cut(s) 1098
BseCI ATCGAT 2 cut(s) 321, 424
BseDI CCNNGG 2 cut(s) 873, 1430
BseGI GGATG 5 cut(s) 748, 869, 1201, 1321, 1409
BseLI CCNNNNNNNGG 2 cut(s) 126, 1331
BseMI GCAATG 1 cut(s) 1098
BseMII CTCAG 4 cut(s) 552, 702, 797, 1020
BseNI ACTGG 3 cut(s) 58, 763, 1193
BseRI GAGGAG 4 cut(s) 184, 299, 513, 1002
BseXI GCAGC 3 cut(s) 31, 253, 430
Bsh1236I CGCG 3 cut(s) 17, 91, 652
Bsh1285I CGRYCG 1 cut(s) 142
BshFI GGCC 1 cut(s) 333
BshNI GGYRCC 1 cut(s) 214
BshVI ATCGAT 2 cut(s) 321, 424
BsiEI CGRYCG 1 cut(s) 142
BsiHKCI CYCGRG 1 cut(s) 495
BsiSI CCGG 5 cut(s) 218, 334, 397, 695, 745
BslFI GGGAC 1 cut(s) 378
BslI CCNNNNNNNGG 2 cut(s) 126, 1331
BsmAI GTCTC 2 cut(s) 1201, 1246
BsmFI GGGAC 1 cut(s) 378
BsnI GGCC 1 cut(s) 333
Bso31I GGTCTC 2 cut(s) 1201, 1246
BsoBI CYCGRG 1 cut(s) 495
Bsp143I GATC 9 cut(s) 157, 162, 322, 421, 937, 955, 1002, 1081, 1305
BspACI CCGC 5 cut(s) 15, 354, 440, 652, 1331
BspANI GGCC 1 cut(s) 333
BspCNI CTCAG 4 cut(s) 553, 701, 796, 1019
BspDI ATCGAT 2 cut(s) 321, 424
BspFNI CGCG 3 cut(s) 17, 91, 652
BspLI GGNNCC 1 cut(s) 216
BspOI GCTAGC 1 cut(s) 261
BspPI GGATC 2 cut(s) 152, 932
BspQI GCTCTTC 1 cut(s) 393
BspT107I GGYRCC 1 cut(s) 214
BspTNI GGTCTC 2 cut(s) 1201, 1246
BsrDI GCAATG 1 cut(s) 1098
BsrI ACTGG 3 cut(s) 58, 763, 1193
BssECI CCNNGG 2 cut(s) 873, 1430
BssMI GATC 9 cut(s) 157, 162, 322, 421, 937, 955, 1002, 1081, 1305
BssNI GRCGYC 1 cut(s) 859
BssSI CACGAG 2 cut(s) 417, 549
BssT1I CCWWGG 2 cut(s) 873, 1430
Bst2BI CACGAG 2 cut(s) 417, 549
Bst4CI ACNGT 3 cut(s) 84, 538, 953
Bst6I CTCTTC 1 cut(s) 393
BstACI GRCGYC 1 cut(s) 859
BstC8I GCNNGC 2 cut(s) 259, 650
BstDEI CTNAG 9 cut(s) 392, 561, 688, 783, 881, 1006, 1136, 1240, 1269
BstF5I GGATG 5 cut(s) 748, 869, 1201, 1321, 1409
BstFNI CGCG 3 cut(s) 17, 91, 652
BstH2I RGCGCY 1 cut(s) 344
BstHHI GCGC 2 cut(s) 19, 343
BstKTI GATC 9 cut(s) 160, 165, 325, 424, 940, 958, 1005, 1084, 1308
BstMAI GTCTC 2 cut(s) 1201, 1246
BstMBI GATC 9 cut(s) 157, 162, 322, 421, 937, 955, 1002, 1081, 1305
BstMCI CGRYCG 1 cut(s) 142
BstMWI GCNNNNNNNGC 3 cut(s) 449, 500, 1058
BstSCI CCNGG 1 cut(s) 693
BstUI CGCG 3 cut(s) 17, 91, 652
BstV1I GCAGC 3 cut(s) 31, 253, 430
BstV2I GAAGAC 2 cut(s) 141, 530
BstX2I RGATCY 3 cut(s) 937, 1002, 1081
BstXI CCANNNNNNTGG 1 cut(s) 770
BstYI RGATCY 3 cut(s) 937, 1002, 1081
Bsu15I ATCGAT 2 cut(s) 321, 424
Bsu36I CCTNAGG 1 cut(s) 1136
BsuRI GGCC 1 cut(s) 333
BsuTUI ATCGAT 2 cut(s) 321, 424
BtgZI GCGATG 1 cut(s) 334
BtsCI GGATG 5 cut(s) 748, 869, 1201, 1321, 1409
BtsIMutI CAGTG 1 cut(s) 949
Cac8I GCNNGC 2 cut(s) 259, 650
CfoI GCGC 2 cut(s) 19, 343
Cfr13I GGNCC 1 cut(s) 117
ClaI ATCGAT 2 cut(s) 321, 424
CseI GACGC 1 cut(s) 80
Csp6I GTAC 4 cut(s) 215, 435, 457, 1190
CspCI CAANNNNNGTGG 2 cut(s) 1388, 1423
CviAII CATG 4 cut(s) 124, 719, 910, 923
CviQI GTAC 4 cut(s) 215, 435, 457, 1190
DdeI CTNAG 9 cut(s) 392, 561, 688, 783, 881, 1006, 1136, 1240, 1269
DpnI GATC 9 cut(s) 159, 164, 324, 423, 939, 957, 1004, 1083, 1307
DpnII GATC 9 cut(s) 157, 162, 322, 421, 937, 955, 1002, 1081, 1305
EaeI YGGCCR 1 cut(s) 331
Eam1104I CTCTTC 1 cut(s) 393
EarI CTCTTC 1 cut(s) 393
Eco130I CCWWGG 2 cut(s) 873, 1430
Eco31I GGTCTC 2 cut(s) 1201, 1246
Eco47I GGWCC 1 cut(s) 117
Eco57I CTGAAG 1 cut(s) 1236
Eco81I CCTNAGG 1 cut(s) 1136
Eco88I CYCGRG 1 cut(s) 495
EcoT14I CCWWGG 2 cut(s) 873, 1430
ErhI CCWWGG 2 cut(s) 873, 1430
FaeI CATG 4 cut(s) 127, 722, 913, 926
FalI AAGNNNNNCTT 2 cut(s) 846, 878
FaqI GGGAC 1 cut(s) 378
FatI CATG 4 cut(s) 123, 718, 909, 922
FauI CCCGC 2 cut(s) 645, 1324
FauNDI CATATG 1 cut(s) 207
Fnu4HI GCNGC 5 cut(s) 20, 242, 354, 441, 444
FokI GGATG 5 cut(s) 735, 856, 1188, 1308, 1416
Fsp4HI GCNGC 5 cut(s) 20, 242, 354, 441, 444
FspBI CTAG 3 cut(s) 258, 519, 734
GlaI GCGC 2 cut(s) 18, 342
GluI GCNGC 5 cut(s) 20, 242, 354, 441, 444
GsuI CTGGAG 1 cut(s) 1272
HaeII RGCGCY 1 cut(s) 344
HaeIII GGCC 1 cut(s) 333
HapII CCGG 5 cut(s) 218, 334, 397, 695, 745
HgaI GACGC 1 cut(s) 80
HhaI GCGC 2 cut(s) 19, 343
Hin1I GRCGYC 1 cut(s) 859
Hin1II CATG 4 cut(s) 127, 722, 913, 926
Hin6I GCGC 2 cut(s) 17, 341
HinP1I GCGC 2 cut(s) 17, 341
HinfI GANTC 8 cut(s) 61, 172, 179, 223, 230, 279, 526, 544
HpaII CCGG 5 cut(s) 218, 334, 397, 695, 745
HphI GGTGA 1 cut(s) 278
Hpy166II GTNNAC 3 cut(s) 87, 478, 932
Hpy8I GTNNAC 3 cut(s) 87, 478, 932
Hpy99I CGWCG 2 cut(s) 69, 238
HpyAV CCTTC 3 cut(s) 293, 484, 1238
HpyCH4III ACNGT 3 cut(s) 84, 538, 953
HpyCH4IV ACGT 2 cut(s) 728, 859
HpyCH4V TGCA 4 cut(s) 241, 452, 1103, 1148
HpyF10VI GCNNNNNNNGC 3 cut(s) 449, 500, 1058
HpyF3I CTNAG 9 cut(s) 392, 561, 688, 783, 881, 1006, 1136, 1240, 1269
HpySE526I ACGT 2 cut(s) 728, 859
Hsp92I GRCGYC 1 cut(s) 859
Hsp92II CATG 4 cut(s) 127, 722, 913, 926
HspAI GCGC 2 cut(s) 17, 341
KpnI GGTACC 1 cut(s) 218
Kzo9I GATC 9 cut(s) 157, 162, 322, 421, 937, 955, 1002, 1081, 1305
LguI GCTCTTC 1 cut(s) 393
LmnI GCTCC 4 cut(s) 286, 500, 620, 773
Lsp1109I GCAGC 3 cut(s) 31, 253, 430
LweI GCATC 8 cut(s) 228, 327, 403, 439, 618, 757, 1135, 1330
MaeI CTAG 3 cut(s) 258, 519, 734
MaeII ACGT 2 cut(s) 728, 859
MaeIII GTNAC 3 cut(s) 683, 778, 1280
MalI GATC 9 cut(s) 159, 164, 324, 423, 939, 957, 1004, 1083, 1307
MboI GATC 9 cut(s) 157, 162, 322, 421, 937, 955, 1002, 1081, 1305
MboII GAAGA 5 cut(s) 141, 174, 380, 535, 1229
MflI RGATCY 3 cut(s) 937, 1002, 1081
MluCI AATT 9 cut(s) 44, 303, 466, 722, 995, 1035, 1090, 1356, 1387
MluI ACGCGT 1 cut(s) 89
MlyI GAGTC 2 cut(s) 181, 520
MmeI TCCRAC 1 cut(s) 751
MseI TTAA 5 cut(s) 312, 381, 573, 833, 998
MslI CAYNNNNRTG 2 cut(s) 372, 753
MspI CCGG 5 cut(s) 218, 334, 397, 695, 745
MspR9I CCNGG 1 cut(s) 695
MvnI CGCG 3 cut(s) 17, 91, 652
MwoI GCNNNNNNNGC 3 cut(s) 449, 500, 1058
NciI CCSGG 1 cut(s) 695
NdeI CATATG 1 cut(s) 207
NdeII GATC 9 cut(s) 157, 162, 322, 421, 937, 955, 1002, 1081, 1305
NheI GCTAGC 1 cut(s) 257
NlaIII CATG 4 cut(s) 127, 722, 913, 926
NlaIV GGNNCC 1 cut(s) 216
NmuCI GTSAC 1 cut(s) 778
PaeR7I CTCGAG 1 cut(s) 495
PciSI GCTCTTC 1 cut(s) 393
PcsI WCGNNNNNNNCGW 1 cut(s) 1128
PfeI GAWTC 6 cut(s) 61, 179, 223, 230, 279, 544
PflFI GACNNNGTC 1 cut(s) 538
PkrI GCNGC 5 cut(s) 21, 243, 355, 442, 445
PleI GAGTC 2 cut(s) 180, 520
PpsI GAGTC 2 cut(s) 180, 520
PsiI TTATAA 1 cut(s) 1116
PspN4I GGNNCC 1 cut(s) 216
PspPI GGNCC 1 cut(s) 117
PspXI VCTCGAGB 1 cut(s) 495
PsuI RGATCY 3 cut(s) 937, 1002, 1081
PsyI GACNNNGTC 1 cut(s) 538
RsaI GTAC 4 cut(s) 216, 436, 458, 1191
RsaNI GTAC 4 cut(s) 215, 435, 457, 1190
RseI CAYNNNNRTG 2 cut(s) 372, 753
SapI GCTCTTC 1 cut(s) 393
SaqAI TTAA 5 cut(s) 312, 381, 573, 833, 998
SatI GCNGC 5 cut(s) 20, 242, 354, 441, 444
Sau3AI GATC 9 cut(s) 157, 162, 322, 421, 937, 955, 1002, 1081, 1305
Sau96I GGNCC 1 cut(s) 117
ScaI AGTACT 1 cut(s) 458
SchI GAGTC 2 cut(s) 181, 520
ScrFI CCNGG 1 cut(s) 695
SfaNI GCATC 8 cut(s) 228, 327, 403, 439, 618, 757, 1135, 1330
Sfr274I CTCGAG 1 cut(s) 495
SinI GGWCC 1 cut(s) 117
SlaI CTCGAG 1 cut(s) 495
SmiMI CAYNNNNRTG 2 cut(s) 372, 753
SmlI CTYRAG 3 cut(s) 37, 495, 581
SmoI CTYRAG 3 cut(s) 37, 495, 581
Sse9I AATT 9 cut(s) 44, 303, 466, 722, 995, 1035, 1090, 1356, 1387
SsiI CCGC 5 cut(s) 15, 354, 440, 652, 1331
SspI AATATT 2 cut(s) 973, 1128
SspMI CTAG 3 cut(s) 258, 519, 734
StyD4I CCNGG 1 cut(s) 693
StyI CCWWGG 2 cut(s) 873, 1430
TaaI ACNGT 3 cut(s) 84, 538, 953
TaiI ACGT 2 cut(s) 731, 862
TaqII GACCGA 2 cut(s) 128, 1357
TasI AATT 9 cut(s) 44, 303, 466, 722, 995, 1035, 1090, 1356, 1387
TatI WGTACW 1 cut(s) 456
TauI GCSGC 2 cut(s) 356, 443
TfiI GAWTC 6 cut(s) 61, 179, 223, 230, 279, 544
Tru1I TTAA 5 cut(s) 312, 381, 573, 833, 998
Tru9I TTAA 5 cut(s) 312, 381, 573, 833, 998
TscAI CASTG 1 cut(s) 956
TseFI GTSAC 1 cut(s) 778
TseI GCWGC 3 cut(s) 19, 241, 443
Tsp45I GTSAC 1 cut(s) 778
TspDTI ATGAA 3 cut(s) 735, 926, 939
TspRI CASTG 1 cut(s) 956
Tth111I GACNNNGTC 1 cut(s) 538
VpaK11BI GGWCC 1 cut(s) 117
XapI RAATTY 2 cut(s) 466, 1035
XhoI CTCGAG 1 cut(s) 495
XspI CTAG 3 cut(s) 258, 519, 734
ZraI GACGTC 1 cut(s) 860
ZrmI AGTACT 1 cut(s) 458
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.