Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0008354

Physical Location & Seq

Genomic Coordinates Forward (+)

387035 .. 391270

Gene Structure 4236 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG005000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1425 bp

ATGGAGAACATCGCGGCGCAGCTTAAGCGAGGCATTTCCCGGCAGTTCTCGACCGGCTCGCTCCGGAGGAACCTCAGCCGGCAGTTCAGCCGGCAATCCTCGCTCGACCCCAGGCGGAACAACCTCCGCTTCAGCTTCGGCCGCCAGTCCTCGCTCGACCCGATTCGGCGCAGCCCCAGCGAAGACGACTCCGAGCTGTCCGTGCCGGAGAATCTCGACTCCACCATGCACTTGCTCTTCCTGGCCTGCCGAGGCGACGTCCATGGCGTCGAAGACCTTCTCAATCAAGGCATTGACGTCAACAGCATCGACTTGGATGGCCGCACCGCGCTGCACATCGCCGCCTGCGAGGGTCACATCGACGTTTGCAGGCTCTTGCTCAGCCGCAAGGCCAACATCGATGCTCGCGATCGCTGGGGCAGTACGGCAGCTGCTGATGCCAAGTATTATGGGAATACGGATGTGTACAACATTTTGAAGGCACGGGGAGCCAAAGTTCCGAAAACCAGGAAGACCCCGATGACTGTTGCAAATCCTCGAGAAGTTCCAGAGTATGAGCTCAATCCATTGGAGCTTCAAGTTCGAAAGAGTGATGGCATCACAAAGGGAACGTATCAAGTGGCTAAATGGAACGGTACAAAGGTATCTGTAAAGATAGTAGACAAGGAAAGCTATTCAGACCCTGAATGCATAAATGCTTTCAACAATGAATTGACCTTGCTAGAGAAGGTTCGGCATCCAAACGTCGTTCAGTTTGTTGGTGCTGTTACCCAGAATATACCCATGATGATTGTTGTAGAATATCATGCGAAAGGTGACTTAGGAAGCTATCTTCAAAAGAAAGGACGATTATCTCCATCAAAAGCACTGAGATTTGCTCTTGACATTGCAAGGGGCATGAATTATCTTCACGAATGTAAACCAGACCCAATAATCCACTGCGACTTAAAGCCAAAAAATATTTTGCTCGATAATGGAGGTCACTTGAAGATATCTGGATTCGGGTTGATAAGGTTGTCATATATTTCTCCTGACAAAGCAAAACTGGCACAGCCTTGGGCACACAATCATTCAAGTCTCTATGTGGCACCTGAGACTTACAGAGAAGAAATTTTTGACAGAAGTGTGGATGCATATTCTTTCGGACTCATATTATATGAGATGATTGAGGGTGTACAGCCATTCCATCCCAAGCCTATTGAAGAGGCTGTCAAAATGATGTGTTTAGAAGGGAAAAGACCACCGATGAGAACGAAGTCAAAAAGTTATCCTGCTGTAGTAAAAGAGTTGATTGAGGAATGTTGGGATCCAGAACCTTGTTGTAGGCCAACATTCTCTGAGATTATTATACGGTTGGATAAGATAGTTGCAAACTGCACAAAGCAGGGATGGTGGAAAGATACTTTTAAGCTTCCTTGGAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006970 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009628 GO:0009898 GO:0009987 GO:0012505 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0045087 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0098552 GO:0098562 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank Ank_2 Pkinase_Tyr

Protein Analysis

474

Amino Acids

53.68

Weight (kDa)

8.93

Isoelectric Point (pI)

52.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_2	PF12796	80 - 167	3.3e-13	Ankyrin repeats (3 copies)
Ank_4	PF13637	84 - 126	1.9e-06	Ankyrin repeats (many copies)
Ank_5	PF13857	93 - 143	3.1e-06	Ankyrin repeats (many copies)
Ank	PF00023	106 - 138	2.5e-10	Ankyrin repeat
PK_Tyr_Ser-Thr	PF07714	200 - 451	7.1e-50	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	207 - 449	2.1e-44	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008354)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31800 AT2G43850 AT2G43850 AT2G43850 AT3G59830
fragaria_vesca	FvH4_1g00360 FvH4_1g00360
malus_domestica	MD02G1002900.v1.1 MD05G1054300.v1.1 MD15G1146100.v1.1
prunus_persica	Prupe.7G268300_v2.0.a1
pyrus_communis	pycom02g00150 pycom15g13120
rosa_chinensis	RchiOBHm_Chr2g0084791
rosa_laevigata	RLG00000015639
rosa_multiflora	Rmu_sc0002352.1_g000001 Rmu_ssc0000436.1_g000001
rosa_roxburghii	Rroxscaffold_2G00155810
rosa_rugosa	Rorug01G0456300
rosa_samantha	Rh2BG005000 Rh2CG005400 Rh2DG004800
rosa_wichuraiana	Rw2G000390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	261, 300
AccB1I	GGYRCC	1 cut(s)	1087
AccI	GTMKAC	1 cut(s)	660
AccII	CGCG	3 cut(s)	14, 329, 408
AccIII	TCCGGA	1 cut(s)	63
AciI	CCGC	8 cut(s)	14, 115, 127, 142, 322, 327, 342, 385
AclWI	GGATC	2 cut(s)	1301, 1314
AcoI	YGGCCR	2 cut(s)	139, 319
AcsI	RAATTY	1 cut(s)	1110
AcuI	CTGAAG	1 cut(s)	115
AcyI	GRCGYC	3 cut(s)	258, 267, 297
AfaI	GTAC	4 cut(s)	424, 467, 637, 1176
AflII	CTTAAG	1 cut(s)	23
AgsI	TTSAA	7 cut(s)	478, 578, 703, 836, 988, 1074, 1202
AjnI	CCWGG	3 cut(s)	110, 240, 506
AloI	GAACNNNNNNTCC	2 cut(s)	480, 512
AluBI	AGCT	9 cut(s)	22, 135, 196, 431, 559, 574, 672, 828, 1411
AluI	AGCT	9 cut(s)	22, 135, 196, 431, 559, 574, 672, 828, 1411
Alw21I	GWGCWC	1 cut(s)	561
Alw26I	GTCTC	2 cut(s)	1082, 1088
AlwI	GGATC	2 cut(s)	1301, 1314
AlwNI	CAGNNNCTG	2 cut(s)	434, 683
Ama87I	CYCGRG	1 cut(s)	537
Aor13HI	TCCGGA	1 cut(s)	63
AoxI	GGCC	5 cut(s)	139, 243, 319, 390, 1325
ApeKI	GCWGC	5 cut(s)	19, 171, 331, 428, 431
ApoI	RAATTY	1 cut(s)	1110
AsiSI	GCGATCGC	1 cut(s)	412
Asp700I	GAANNNNTTC	1 cut(s)	276
AspLEI	GCGC	3 cut(s)	19, 171, 331
AsuC2I	CCSGG	1 cut(s)	40
AsuHPI	GGTGA	1 cut(s)	827
AsuII	TTCGAA	1 cut(s)	583
AvaI	CYCGRG	1 cut(s)	537
BaeGI	GKGCMC	1 cut(s)	1063
BaeI	ACNNNNGTAYC	4 cut(s)	627, 627, 660, 660
BamHI	GGATCC	1 cut(s)	1306
BanI	GGYRCC	1 cut(s)	1087
BanII	GRGCYC	1 cut(s)	561
BbsI	GAAGAC	3 cut(s)	189, 279, 518
Bbv12I	GWGCWC	1 cut(s)	561
BbvCI	CCTCAGC	1 cut(s)	74
BbvI	GCAGC	5 cut(s)	31, 183, 318, 418, 440
BccI	CCATC	5 cut(s)	311, 587, 865, 1194, 1383
BceAI	ACGGC	1 cut(s)	441
BciT130I	CCWGG	3 cut(s)	112, 242, 508
BcnI	CCSGG	1 cut(s)	40
BcoDI	GTCTC	2 cut(s)	1082, 1088
BfaI	CTAG	1 cut(s)	722
BfmI	CTRYAG	1 cut(s)	1275
BfrI	CTTAAG	1 cut(s)	23
BlpI	GCTNAGC	1 cut(s)	380
Bme1390I	CCNGG	4 cut(s)	40, 112, 242, 508
BmeT110I	CYCGRG	1 cut(s)	537
BmiI	GGNNCC	4 cut(s)	71, 490, 1089, 1308
BmrFI	CCNGG	4 cut(s)	40, 112, 242, 508
BmsI	GCATC	6 cut(s)	315, 391, 427, 606, 745, 1120
BpiI	GAAGAC	3 cut(s)	189, 279, 518
BplI	GAGNNNNNCTC	2 cut(s)	862, 894
Bpu10I	CCTNAGC	1 cut(s)	74
Bpu1102I	GCTNAGC	1 cut(s)	380
Bpu14I	TTCGAA	1 cut(s)	583
BpuMI	CCSGG	1 cut(s)	40
Bsa29I	ATCGAT	1 cut(s)	399
BsaHI	GRCGYC	3 cut(s)	258, 267, 297
BsaJI	CCNNGG	5 cut(s)	110, 250, 262, 1055, 1415
BsaWI	WCCGGW	1 cut(s)	63
BsaXI	ACNNNNNCTCC	2 cut(s)	480, 510
Bse118I	RCCGGY	3 cut(s)	53, 78, 90
Bse1I	ACTGG	2 cut(s)	145, 1050
Bse3DI	GCAATG	1 cut(s)	885
BseAI	TCCGGA	1 cut(s)	63
BseBI	CCWGG	3 cut(s)	112, 242, 508
BseCI	ATCGAT	1 cut(s)	399
BseDI	CCNNGG	5 cut(s)	110, 250, 262, 1055, 1415
BseGI	GGATG	6 cut(s)	322, 466, 736, 1135, 1186, 1394
BseMI	GCAATG	1 cut(s)	885
BseMII	CTCAG	5 cut(s)	88, 394, 860, 1083, 1329
BseNI	ACTGG	2 cut(s)	145, 1050
BseSI	GKGCMC	1 cut(s)	1063
BseX3I	CGGCCG	1 cut(s)	139
BseXI	GCAGC	5 cut(s)	31, 183, 318, 418, 440
BseYI	CCCAGC	2 cut(s)	176, 414
BsgI	GTGCAG	2 cut(s)	317, 1360
Bsh1236I	CGCG	3 cut(s)	14, 329, 408
Bsh1285I	CGRYCG	3 cut(s)	54, 142, 412
BshFI	GGCC	5 cut(s)	141, 245, 321, 392, 1327
BshNI	GGYRCC	1 cut(s)	1087
BshVI	ATCGAT	1 cut(s)	399
BsiEI	CGRYCG	3 cut(s)	54, 142, 412
BsiHKAI	GWGCWC	1 cut(s)	561
BsiHKCI	CYCGRG	1 cut(s)	537
BsiSI	CCGG	6 cut(s)	40, 54, 64, 79, 91, 206
BsmAI	GTCTC	2 cut(s)	1082, 1088
BsmI	GAATGC	1 cut(s)	692
BsnI	GGCC	5 cut(s)	141, 245, 321, 392, 1327
BsoBI	CYCGRG	1 cut(s)	537
Bsp119I	TTCGAA	1 cut(s)	583
Bsp1286I	GDGCHC	2 cut(s)	561, 1063
Bsp13I	TCCGGA	1 cut(s)	63
Bsp1407I	TGTACA	2 cut(s)	465, 1174
Bsp143I	GATC	2 cut(s)	409, 1306
Bsp1720I	GCTNAGC	1 cut(s)	380
Bsp19I	CCATGG	1 cut(s)	262
Bsp68I	TCGCGA	1 cut(s)	408
BspACI	CCGC	8 cut(s)	14, 115, 127, 142, 322, 327, 342, 385
BspANI	GGCC	5 cut(s)	141, 245, 321, 392, 1327
BspCNI	CTCAG	5 cut(s)	87, 393, 861, 1084, 1330
BspDI	ATCGAT	1 cut(s)	399
BspEI	TCCGGA	1 cut(s)	63
BspFNI	CGCG	3 cut(s)	14, 329, 408
BspLI	GGNNCC	4 cut(s)	71, 490, 1089, 1308
BspPI	GGATC	2 cut(s)	1301, 1314
BspQI	GCTCTTC	1 cut(s)	242
BspT104I	TTCGAA	1 cut(s)	583
BspT107I	GGYRCC	1 cut(s)	1087
BspTI	CTTAAG	1 cut(s)	23
BsrDI	GCAATG	1 cut(s)	885
BsrFI	RCCGGY	3 cut(s)	53, 78, 90
BsrGI	TGTACA	2 cut(s)	465, 1174
BsrI	ACTGG	2 cut(s)	145, 1050
BssAI	RCCGGY	3 cut(s)	53, 78, 90
BssECI	CCNNGG	5 cut(s)	110, 250, 262, 1055, 1415
BssMI	GATC	2 cut(s)	409, 1306
BssNI	GRCGYC	3 cut(s)	258, 267, 297
BssT1I	CCWWGG	3 cut(s)	262, 1055, 1415
Bst2UI	CCWGG	3 cut(s)	112, 242, 508
Bst4CI	ACNGT	3 cut(s)	526, 635, 1353
Bst6I	CTCTTC	2 cut(s)	242, 1197
BstACI	GRCGYC	3 cut(s)	258, 267, 297
BstAFI	CTTAAG	1 cut(s)	23
BstAUI	TGTACA	2 cut(s)	465, 1174
BstBI	TTCGAA	1 cut(s)	583
BstC8I	GCNNGC	7 cut(s)	59, 80, 92, 247, 346, 371, 406
BstDEI	CTNAG	6 cut(s)	74, 380, 820, 869, 1092, 1338
BstDSI	CCRYGG	1 cut(s)	262
BstF5I	GGATG	6 cut(s)	322, 466, 736, 1135, 1186, 1394
BstFNI	CGCG	3 cut(s)	14, 329, 408
BstHHI	GCGC	3 cut(s)	19, 171, 331
BstKTI	GATC	2 cut(s)	412, 1309
BstMAI	GTCTC	2 cut(s)	1082, 1088
BstMBI	GATC	2 cut(s)	409, 1306
BstMCI	CGRYCG	3 cut(s)	54, 142, 412
BstMWI	GCNNNNNNNGC	8 cut(s)	25, 100, 141, 177, 202, 437, 488, 1046
BstNI	CCWGG	3 cut(s)	112, 242, 508
BstSCI	CCNGG	4 cut(s)	38, 110, 240, 506
BstSFI	CTRYAG	1 cut(s)	1275
BstSLI	GKGCMC	1 cut(s)	1063
BstUI	CGCG	3 cut(s)	14, 329, 408
BstV1I	GCAGC	5 cut(s)	31, 183, 318, 418, 440
BstV2I	GAAGAC	3 cut(s)	189, 279, 518
BstX2I	RGATCY	1 cut(s)	1306
BstYI	RGATCY	1 cut(s)	1306
BstZI	CGGCCG	1 cut(s)	139
Bsu15I	ATCGAT	1 cut(s)	399
BsuRI	GGCC	5 cut(s)	141, 245, 321, 392, 1327
BsuTUI	ATCGAT	1 cut(s)	399
BtgI	CCRYGG	1 cut(s)	262
BtgZI	GCGATG	1 cut(s)	322
BtsCI	GGATG	6 cut(s)	322, 466, 736, 1135, 1186, 1394
BtsI	GCAGTG	1 cut(s)	937
BtsIMutI	CAGTG	2 cut(s)	866, 937
BtuMI	TCGCGA	1 cut(s)	408
Cac8I	GCNNGC	7 cut(s)	59, 80, 92, 247, 346, 371, 406
CaiI	CAGNNNCTG	2 cut(s)	434, 683
CfoI	GCGC	3 cut(s)	19, 171, 331
Cfr10I	RCCGGY	3 cut(s)	53, 78, 90
ClaI	ATCGAT	1 cut(s)	399
CseI	GACGC	1 cut(s)	256
Csp6I	GTAC	4 cut(s)	423, 466, 636, 1175
CviAII	CATG	5 cut(s)	226, 263, 784, 806, 898
CviQI	GTAC	4 cut(s)	423, 466, 636, 1175
DdeI	CTNAG	6 cut(s)	74, 380, 820, 869, 1092, 1338
DpnI	GATC	2 cut(s)	411, 1308
DpnII	GATC	2 cut(s)	409, 1306
EaeI	YGGCCR	2 cut(s)	139, 319
EagI	CGGCCG	1 cut(s)	139
Eam1104I	CTCTTC	2 cut(s)	242, 1197
EarI	CTCTTC	2 cut(s)	242, 1197
EciI	GGCGGA	1 cut(s)	130
Ecl136II	GAGCTC	1 cut(s)	559
EclXI	CGGCCG	1 cut(s)	139
Eco130I	CCWWGG	3 cut(s)	262, 1055, 1415
Eco24I	GRGCYC	1 cut(s)	561
Eco32I	GATATC	1 cut(s)	993
Eco52I	CGGCCG	1 cut(s)	139
Eco53kI	GAGCTC	1 cut(s)	559
Eco57I	CTGAAG	1 cut(s)	115
Eco88I	CYCGRG	1 cut(s)	537
EcoICRI	GAGCTC	1 cut(s)	559
EcoRII	CCWGG	3 cut(s)	110, 240, 506
EcoRV	GATATC	1 cut(s)	993
EcoT14I	CCWWGG	3 cut(s)	262, 1055, 1415
EcoT22I	ATGCAT	2 cut(s)	692, 1135
EcoT38I	GRGCYC	1 cut(s)	561
ErhI	CCWWGG	3 cut(s)	262, 1055, 1415
FaeI	CATG	5 cut(s)	229, 266, 787, 809, 901
FatI	CATG	5 cut(s)	225, 262, 783, 805, 897
FblI	GTMKAC	1 cut(s)	660
FokI	GGATG	6 cut(s)	329, 473, 723, 1142, 1173, 1401
FriOI	GRGCYC	1 cut(s)	561
FspBI	CTAG	1 cut(s)	722
GlaI	GCGC	3 cut(s)	18, 170, 330
GsaI	CCCAGC	2 cut(s)	180, 418
HaeIII	GGCC	5 cut(s)	141, 245, 321, 392, 1327
HapII	CCGG	6 cut(s)	40, 54, 64, 79, 91, 206
HgaI	GACGC	1 cut(s)	256
HhaI	GCGC	3 cut(s)	19, 171, 331
Hin1I	GRCGYC	3 cut(s)	258, 267, 297
Hin1II	CATG	5 cut(s)	229, 266, 787, 809, 901
Hin6I	GCGC	3 cut(s)	17, 169, 329
HinP1I	GCGC	3 cut(s)	17, 169, 329
HincII	GTYRAC	1 cut(s)	301
HindII	GTYRAC	1 cut(s)	301
HindIII	AAGCTT	1 cut(s)	1409
HinfI	GANTC	6 cut(s)	163, 188, 211, 218, 999, 1146
HpaII	CCGG	6 cut(s)	40, 54, 64, 79, 91, 206
HphI	GGTGA	1 cut(s)	827
Hpy166II	GTNNAC	5 cut(s)	301, 466, 661, 920, 1175
Hpy188I	TCNGA	5 cut(s)	193, 501, 679, 1145, 1339
Hpy8I	GTNNAC	5 cut(s)	301, 466, 661, 920, 1175
Hpy99I	CGWCG	4 cut(s)	260, 272, 365, 749
HpyAV	CCTTC	4 cut(s)	287, 472, 721, 1223
HpyCH4III	ACNGT	3 cut(s)	526, 635, 1353
HpyCH4IV	ACGT	5 cut(s)	258, 297, 363, 611, 744
HpyCH4V	TGCA	9 cut(s)	229, 334, 369, 530, 690, 890, 1133, 1370, 1377
HpyF10VI	GCNNNNNNNGC	8 cut(s)	25, 100, 141, 177, 202, 437, 488, 1046
HpyF3I	CTNAG	6 cut(s)	74, 380, 820, 869, 1092, 1338
HpySE526I	ACGT	5 cut(s)	258, 297, 363, 611, 744
Hsp92I	GRCGYC	3 cut(s)	258, 267, 297
Hsp92II	CATG	5 cut(s)	229, 266, 787, 809, 901
HspAI	GCGC	3 cut(s)	17, 169, 329
Kpn2I	TCCGGA	1 cut(s)	63
KroI	GCCGGC	2 cut(s)	78, 90
KroNI	GCCGGC	2 cut(s)	80, 92
Kzo9I	GATC	2 cut(s)	409, 1306
LguI	GCTCTTC	1 cut(s)	242
LmnI	GCTCC	3 cut(s)	66, 488, 571
Lsp1109I	GCAGC	5 cut(s)	31, 183, 318, 418, 440
LweI	GCATC	6 cut(s)	315, 391, 427, 606, 745, 1120
MaeI	CTAG	1 cut(s)	722
MaeII	ACGT	5 cut(s)	258, 297, 363, 611, 744
MaeIII	GTNAC	4 cut(s)	353, 766, 815, 980
MalI	GATC	2 cut(s)	411, 1308
MboI	GATC	2 cut(s)	409, 1306
MboII	GAAGA	9 cut(s)	194, 229, 284, 523, 824, 899, 1000, 1118, 1214
MflI	RGATCY	1 cut(s)	1306
MhlI	GDGCHC	2 cut(s)	561, 1063
MluCI	AATT	3 cut(s)	710, 901, 1110
MlyI	GAGTC	3 cut(s)	182, 212, 1140
MmeI	TCCRAC	1 cut(s)	1335
Mph1103I	ATGCAT	2 cut(s)	692, 1135
MroI	TCCGGA	1 cut(s)	63
MroNI	GCCGGC	2 cut(s)	78, 90
MroXI	GAANNNNTTC	1 cut(s)	276
MseI	TTAA	3 cut(s)	24, 947, 1407
MspA1I	CMGCKG	1 cut(s)	431
MspCI	CTTAAG	1 cut(s)	23
MspI	CCGG	6 cut(s)	40, 54, 64, 79, 91, 206
MspR9I	CCNGG	4 cut(s)	40, 112, 242, 508
Mva1269I	GAATGC	1 cut(s)	692
MvaI	CCWGG	3 cut(s)	112, 242, 508
MvnI	CGCG	3 cut(s)	14, 329, 408
MwoI	GCNNNNNNNGC	8 cut(s)	25, 100, 141, 177, 202, 437, 488, 1046
NaeI	GCCGGC	2 cut(s)	80, 92
NciI	CCSGG	1 cut(s)	40
NcoI	CCATGG	1 cut(s)	262
NdeII	GATC	2 cut(s)	409, 1306
NgoMIV	GCCGGC	2 cut(s)	78, 90
NlaIII	CATG	5 cut(s)	229, 266, 787, 809, 901
NlaIV	GGNNCC	4 cut(s)	71, 490, 1089, 1308
NmeAIII	GCCGAG	1 cut(s)	275
NmuCI	GTSAC	3 cut(s)	353, 815, 980
NruI	TCGCGA	1 cut(s)	408
NsiI	ATGCAT	2 cut(s)	692, 1135
NspV	TTCGAA	1 cut(s)	583
PaeR7I	CTCGAG	1 cut(s)	537
PciSI	GCTCTTC	1 cut(s)	242
PcsI	WCGNNNNNNNCGW	4 cut(s)	158, 264, 345, 405
PctI	GAATGC	1 cut(s)	692
PdiI	GCCGGC	2 cut(s)	80, 92
PdmI	GAANNNNTTC	1 cut(s)	276
PfeI	GAWTC	3 cut(s)	163, 211, 999
Ple19I	CGATCG	1 cut(s)	412
PleI	GAGTC	3 cut(s)	182, 212, 1140
PpsI	GAGTC	3 cut(s)	182, 212, 1140
Psp124BI	GAGCTC	1 cut(s)	561
Psp6I	CCWGG	3 cut(s)	110, 240, 506
PspFI	CCCAGC	2 cut(s)	176, 414
PspGI	CCWGG	3 cut(s)	110, 240, 506
PspN4I	GGNNCC	4 cut(s)	71, 490, 1089, 1308
PstNI	CAGNNNCTG	2 cut(s)	434, 683
PsuI	RGATCY	1 cut(s)	1306
PvuI	CGATCG	1 cut(s)	412
PvuII	CAGCTG	1 cut(s)	431
RgaI	GCGATCGC	1 cut(s)	412
RruI	TCGCGA	1 cut(s)	408
RsaI	GTAC	4 cut(s)	424, 467, 637, 1176
RsaNI	GTAC	4 cut(s)	423, 466, 636, 1175
SacI	GAGCTC	1 cut(s)	561
SapI	GCTCTTC	1 cut(s)	242
SaqAI	TTAA	3 cut(s)	24, 947, 1407
Sau3AI	GATC	2 cut(s)	409, 1306
SchI	GAGTC	3 cut(s)	182, 212, 1140
ScrFI	CCNGG	4 cut(s)	40, 112, 242, 508
SduI	GDGCHC	2 cut(s)	561, 1063
SfaAI	GCGATCGC	1 cut(s)	412
SfaNI	GCATC	6 cut(s)	315, 391, 427, 606, 745, 1120
SfcI	CTRYAG	1 cut(s)	1275
Sfr274I	CTCGAG	1 cut(s)	537
SfuI	TTCGAA	1 cut(s)	583
SgfI	GCGATCGC	1 cut(s)	412
SlaI	CTCGAG	1 cut(s)	537
SmlI	CTYRAG	2 cut(s)	23, 537
SmoI	CTYRAG	2 cut(s)	23, 537
Sse9I	AATT	3 cut(s)	710, 901, 1110
SsiI	CCGC	8 cut(s)	14, 115, 127, 142, 322, 327, 342, 385
SspI	AATATT	1 cut(s)	961
SspMI	CTAG	1 cut(s)	722
SstI	GAGCTC	1 cut(s)	561
StyD4I	CCNGG	4 cut(s)	38, 110, 240, 506
StyI	CCWWGG	3 cut(s)	262, 1055, 1415
TaaI	ACNGT	3 cut(s)	526, 635, 1353
TaiI	ACGT	5 cut(s)	261, 300, 366, 614, 747
TasI	AATT	3 cut(s)	710, 901, 1110
TatI	WGTACW	2 cut(s)	465, 1174
TauI	GCSGC	5 cut(s)	17, 144, 324, 344, 387
TfiI	GAWTC	3 cut(s)	163, 211, 999
Tru1I	TTAA	3 cut(s)	24, 947, 1407
Tru9I	TTAA	3 cut(s)	24, 947, 1407
TscAI	CASTG	2 cut(s)	873, 944
TseFI	GTSAC	3 cut(s)	353, 815, 980
TseI	GCWGC	5 cut(s)	19, 171, 331, 428, 431
Tsp45I	GTSAC	3 cut(s)	353, 815, 980
TspDTI	ATGAA	2 cut(s)	723, 914
TspGWI	ACGGA	2 cut(s)	190, 473
TspRI	CASTG	2 cut(s)	873, 944
Vha464I	CTTAAG	1 cut(s)	23
XapI	RAATTY	1 cut(s)	1110
XhoI	CTCGAG	1 cut(s)	537
XmiI	GTMKAC	1 cut(s)	660
XmnI	GAANNNNTTC	1 cut(s)	276
XspI	CTAG	1 cut(s)	722
ZraI	GACGTC	2 cut(s)	259, 298
Zsp2I	ATGCAT	2 cut(s)	692, 1135

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.