Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007307

Physical Location & Seq

Genomic Coordinates Forward (+)

18432686 .. 18437221

Gene Structure 4536 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G44710.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2430 bp

ATGCCACCGAAGGTTGTGAAGAGGGGAGGCGCCGCGAGAAGAGGTGGGAGGCTTACGAGATCGGCGCTCAAGGCGCAGAATCCTCACGTGGAATCTTCCCATGACGAATCTGTTAATATCGGTGAGCTCTCAGGCTCCGATGCACTGGAAGCCAAGGAGGTGACTCCGGAGGTTGATAAAACTGTTGAGGAAGAGAATCCATTAGATGTGCCGAAGTCATCGGATTCAATTGATGATTCTGAAGCTGCAGCGAATCCGCATGTTGATGTTCCGTCGAAAAAGGAGACTGAGGTAGAGGAATCTGTGGATGATTTTGGAAAAGATGAAAGATTGGATTTAGATGACAATGAACCTGAGTATGAGGCTGAGGAATATGGCGGGGAGGAGTTTGAAGAGAGGGAATTGGGACAGGAGGACCATGAGTTGGTAAATGAGGAGGGGGAAGAACTGGAGGAAGAGATTGAGGTCGAGGAGGAAGCTGGTGAGTTTGCAGACGAGATTGGAGATGGTGCGGAGGACCTTGATAGTGAGGATGATGATGATGATCATGCTATTGAAGAGGTCAAGCATGGAGAAACTGTTGATGTGGAAGAAGAAGAGCATCATGATGTTCTCCATGAGAGGCGTAAGCGTAAGGAGTTCGAAATATTTGTTGGGAGTTTGGACAAAGGTGCTTCGGAGGAGGACTTAAAGAAAGTGTTTGGTCATGTGGGCGAGGTGACTGAAGTTAGGATTTTGAAGAATCCTCAGACAAAGAAGAGCAAGGGTTCTGCTTTCTTGCGTTTTGCAACTGTGGAACAGGCAAAACGAGCTGTTAAAGAGCTTAAAAGCCCAATGATAAATGGTAAAAAGTGTGGTGTAACTGCAAGCCAAGATAATGATACCCTCTTCGTTGGTAACATATGCAAGATATGGACCCCAGAAGCTTTGAGGGAGAAGCTTAAACACTATGGAGTTGAGAATATGGATGATATAACGTTGGTAGAGGACAGCAACAATGTCAACATGAATCGAGGGTATGCCTTTTTGGAATTCTCATCTCGCTCAGATGCCATGGATGCTCACAAGCGTCTCGTCAAGAAAGATGTGATGTTTGGAGTTGAGAAGCCTGCAAAGGTCTCTTTTACTGATTCTTTCTTAGACCTGGAAGATGAGATAATGGCGCAGGTTAAGACAATCTTCATTGACGGTCTGTTACCTTCATGGAATGAAGAACGTGTTAGAGACCTTCTGAAACCATATGGTAAACTTGAAAAAGTTGAGCTTGCTCGCAATATGCCATCAGCAAGGAGGAAAGATTTTGGCTTTGTAACTTTTGATACTCATGAAGCTGCTGTGAGTTGTGCCAAATTCATCAACAACTCAGAGCTAGGCGAAGGGGAGGACAAGGCAAAAGTGAGAGCACGCCTGTCTAGACCACTTCAGAAAGCAGGTAAAGGCCGACAATCTAGTCGCTCAGACCAGCGGTCTAGGCATGGGGCTGGACGGTCTGGAAGGAGTTCATTTGCTCGTCTTCCACCTCGTAGCCTTGCTTCCTCTCGGAGTGCTAGAGGCGCTGGATCTCGGGCCCCATCTTCTAGTGCAAAGAGAGCTTCTGGATCAAGAGGAAGACGTCCTCGCCCACCTCTACCTCCGCCTGCAAGAGCTAGGCCCTTGCCTCCACCTGCAAGAGCCAGGCCCATGCCACCACCTGCAAGAGCCAGGCCCTTGCCACCACCTGCTAGGTCATATGATAGAAGACCTCCAGTTCCTCTGTATCCAAAGGCTAGCTTGAAGAGAGACTATGATCGGCGTGATGAACTTCCTCCTCCAAGAAGCAGACCAGCTGTAAGCTATAGTTCCAGGCTTTCTCCTGAGAGGCATCTGTCTTACAGAGATGATTATCCACCCCGGGGTTCGGGTTATTCAGATCTTCCTAGAAGTTCTTCTCGCTCTGAAATTAGGAGGCCATTCGTAGATGACCTTTACAGTCCGAGATTTGAAAGACCTCCAAGTTACAGTGAGGGAAGACCTCGTGCTTATGAACCTCTTCCTGGATCAAAGCGTCCATATGCTGCACTGGATGACCTTCCTCCCCGTTATGCTGATGTTGATGTTCGTCATTCAAGACCCCGTCTGGACTATGATGTTGGCCCATCTCAATATGGGGAATCCTACGGGGACCGGATTCCTAGGTCTAGTCTAGGATATGGAAGCAGCCGAAATTCTATGTCAAATCATGACTCGCGGGGCCCATACAGCAGTCGTCAGGGAATGGATTATGGAGGAGGTTCTTATAGTGGCAGCGATGTAGGAGGTATGTACTCGTCAAGCTATGGTGGCGACTTACCCAGAAGAGATGGAGGAGGTAGCTCGTATTCTTCAATTTACTCCAGCCGTGGCTTGGGTGGTAGTAGTTACTCTGGTGGTGGTCCAGGATCATACTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006417 GO:0007623 GO:0008150 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0016020 GO:0019219 GO:0019222 GO:0030425 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031328 GO:0032268 GO:0032270 GO:0032991 GO:0034248 GO:0034250 GO:0036477 GO:0042995 GO:0043005 GO:0043025 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044297 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044463 GO:0044464 GO:0045727 GO:0045934 GO:0048027 GO:0048511 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051247 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0070937 GO:0071204 GO:0080090 GO:0090365 GO:0090367 GO:0097159 GO:0097447 GO:0097458 GO:0120025 GO:0120038 GO:1901363 GO:1903311 GO:1903312 GO:1990635 GO:1990904 GO:2000112

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

RRM_1

Protein Analysis

809

Amino Acids

89.82

Weight (kDa)

5.52

Isoelectric Point (pI)

67.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	216 - 285	8.6e-18	RNA recognition motif
RRM_1	PF00076	296 - 361	2.7e-06	RNA recognition motif
RRM_1	PF00076	393 - 458	3.7e-10	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007307)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44710 AT2G44710 AT2G44710 AT2G44710
fragaria_vesca	FvH4_7g09210
malus_domestica	MD02G1220100.v1.1 MD07G1096800.v1.1
prunus_persica	Prupe.2G120600_v2.0.a1 Prupe.2G120600_v2.0.a1 Prupe.2G120600_v2.0.a1 Prupe.2G120600_v2.0.a1
pyrus_communis	pycom02g18060 pycom07g07990
rosa_chinensis	RchiOBHm_Chr1g0345261
rosa_laevigata	RLG00000028843
rosa_multiflora	Rmu_sc0002329.1_g000009 Rmu_sc0003175.1_g000005 Rmu_sc0011244.1_g000001
rosa_roxburghii	Rroxscaffold_4G00309150
rosa_rugosa	Rorug01G0177000
rosa_samantha	Rh1AG195100 Rh1BG161200 Rh1CG179500 Rh1DG191600
rosa_wichuraiana	Rw1G016070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	3 cut(s)	1672, 1699, 1726
AasI	GACNNNNNNGTC	1 cut(s)	1449
AatII	GACGTC	1 cut(s)	1615
Acc36I	ACCTGC	5 cut(s)	1156, 1421, 1672, 1699, 1726
AccB1I	GGYRCC	1 cut(s)	29
AccB7I	CCANNNNNTGG	1 cut(s)	424
AccII	CGCG	2 cut(s)	35, 2227
AccIII	TCCGGA	1 cut(s)	166
AciI	CCGC	7 cut(s)	33, 257, 378, 512, 1465, 1634, 2227
AclI	AACGTT	1 cut(s)	977
AclWI	GGATC	4 cut(s)	1567, 1606, 2044, 2425
AcsI	RAATTY	3 cut(s)	1031, 1349, 2203
AcuI	CTGAAG	3 cut(s)	261, 744, 1406
AcvI	CACGTG	1 cut(s)	88
AcyI	GRCGYC	2 cut(s)	30, 1612
AfaI	GTAC	1 cut(s)	2303
AfiI	CCNNNNNNNGG	5 cut(s)	424, 1892, 1897, 2033, 2383
AflIII	ACRYGT	1 cut(s)	1216
AgsI	TTSAA	9 cut(s)	228, 392, 557, 739, 1253, 1774, 1982, 2106, 2364
AhdI	GACNNNNNGTC	1 cut(s)	1465
AjnI	CCWGG	6 cut(s)	1143, 1673, 1700, 1841, 2032, 2413
AjuI	GAANNNNNNNTTGG	2 cut(s)	636, 668
Alw21I	GWGCWC	2 cut(s)	129, 1405
Alw26I	GTCTC	5 cut(s)	278, 1076, 1123, 1218, 1773
AlwI	GGATC	4 cut(s)	1567, 1606, 2044, 2425
Ama87I	CYCGRG	2 cut(s)	1563, 1890
Aor13HI	TCCGGA	1 cut(s)	166
AoxI	GGCC	8 cut(s)	1438, 1566, 1649, 1676, 1703, 1946, 2131, 2230
ApaI	GGGCCC	2 cut(s)	1570, 2234
ApeKI	GCWGC	6 cut(s)	245, 248, 1331, 2054, 2196, 2283
ApoI	RAATTY	3 cut(s)	1031, 1349, 2203
Asp700I	GAANNNNTTC	3 cut(s)	1498, 1924, 2028
AspA2I	CCTAGG	1 cut(s)	2171
AspLEI	GCGC	5 cut(s)	32, 67, 76, 1165, 1556
AsuC2I	CCSGG	2 cut(s)	1891, 1892
AsuHPI	GGTGA	4 cut(s)	134, 172, 494, 730
AsuII	TTCGAA	1 cut(s)	642
AsuNHI	GCTAGC	1 cut(s)	1766
AvaI	CYCGRG	2 cut(s)	1563, 1890
AvaII	GGWCC	5 cut(s)	415, 517, 915, 2161, 2411
AvrII	CCTAGG	1 cut(s)	2171
BaeGI	GKGCMC	2 cut(s)	1570, 2234
BanI	GGYRCC	1 cut(s)	29
BanII	GRGCYC	3 cut(s)	129, 1570, 2234
BarI	GAAGNNNNNNTAC	2 cut(s)	1516, 1548
BauI	CACGAG	1 cut(s)	2013
BbrPI	CACGTG	1 cut(s)	88
BbsI	GAAGAC	4 cut(s)	1505, 1615, 1744, 2014
Bbv12I	GWGCWC	2 cut(s)	129, 1405
BbvCI	CCTCAGC	1 cut(s)	366
BbvI	GCAGC	6 cut(s)	232, 260, 1318, 2041, 2208, 2295
BccI	CCATC	5 cut(s)	500, 1288, 1579, 2143, 2333
BceAI	ACGGC	1 cut(s)	2361
BciT130I	CCWGG	6 cut(s)	1145, 1675, 1702, 1843, 2034, 2415
BciVI	GTATCC	1 cut(s)	1767
BclI	TGATCA	1 cut(s)	544
BcnI	CCSGG	2 cut(s)	1891, 1892
BcoDI	GTCTC	5 cut(s)	278, 1076, 1123, 1218, 1773
BfmI	CTRYAG	2 cut(s)	246, 1834
BfoI	RGCGCY	3 cut(s)	33, 68, 1557
BfuAI	ACCTGC	5 cut(s)	1156, 1421, 1672, 1699, 1726
BfuI	GTATCC	1 cut(s)	1767
BglII	AGATCT	1 cut(s)	1909
BisI	GCNGC	7 cut(s)	33, 246, 249, 1332, 2055, 2197, 2284
BlnI	CCTAGG	1 cut(s)	2171
BlsI	GCNGC	7 cut(s)	34, 247, 250, 1333, 2056, 2198, 2285
Bme1390I	CCNGG	8 cut(s)	1145, 1675, 1702, 1843, 1891, 1892, 2034, 2415
Bme18I	GGWCC	5 cut(s)	415, 517, 915, 2161, 2411
BmeRI	GACNNNNNGTC	1 cut(s)	1465
BmeT110I	CYCGRG	2 cut(s)	1563, 1890
BmiI	GGNNCC	8 cut(s)	31, 136, 917, 1568, 1569, 2162, 2231, 2232
BmrFI	CCNGG	8 cut(s)	1145, 1675, 1702, 1843, 1891, 1892, 2034, 2415
BmsI	GCATC	5 cut(s)	130, 610, 1039, 1048, 1870
BmtI	GCTAGC	1 cut(s)	1770
BpiI	GAAGAC	4 cut(s)	1505, 1615, 1744, 2014
BpmI	CTGGAG	3 cut(s)	470, 1728, 2356
Bpu10I	CCTNAGC	1 cut(s)	366
Bpu14I	TTCGAA	1 cut(s)	642
BpuEI	CTTGAG	1 cut(s)	53
BpuMI	CCSGG	2 cut(s)	1891, 1892
BsaAI	YACGTR	1 cut(s)	88
BsaBI	GATNNNNATC	2 cut(s)	543, 1881
BsaHI	GRCGYC	2 cut(s)	30, 1612
BsaI	GGTCTC	2 cut(s)	1123, 1218
BsaJI	CCNNGG	7 cut(s)	153, 1053, 1889, 1890, 1891, 2171, 2377
BsaWI	WCCGGW	2 cut(s)	166, 2163
BsaXI	ACNNNNNCTCC	2 cut(s)	564, 594
Bsc4I	CCNNNNNNNGG	5 cut(s)	424, 1892, 1897, 2033, 2383
Bse1I	ACTGG	4 cut(s)	150, 453, 1745, 2064
Bse8I	GATNNNNATC	2 cut(s)	543, 1881
BseAI	TCCGGA	1 cut(s)	166
BseBI	CCWGG	6 cut(s)	1145, 1675, 1702, 1843, 2034, 2415
BseDI	CCNNGG	7 cut(s)	153, 1053, 1889, 1890, 1891, 2171, 2377
BseGI	GGATG	5 cut(s)	313, 538, 973, 1063, 2068
BseJI	GATNNNNATC	2 cut(s)	543, 1881
BseLI	CCNNNNNNNGG	5 cut(s)	424, 1892, 1897, 2033, 2383
BseMII	CTCAG	9 cut(s)	144, 279, 345, 357, 761, 1059, 1377, 1470, 1845
BseNI	ACTGG	4 cut(s)	150, 453, 1745, 2064
BseRI	GAGGAG	7 cut(s)	398, 449, 485, 695, 1797, 2280, 2358
BseSI	GKGCMC	2 cut(s)	1570, 2234
BseXI	GCAGC	6 cut(s)	232, 260, 1318, 2041, 2208, 2295
BsgI	GTGCAG	1 cut(s)	2040
Bsh1236I	CGCG	2 cut(s)	35, 2227
BshFI	GGCC	8 cut(s)	1440, 1568, 1651, 1678, 1705, 1948, 2133, 2232
BshNI	GGYRCC	1 cut(s)	29
BsiHKAI	GWGCWC	2 cut(s)	129, 1405
BsiHKCI	CYCGRG	2 cut(s)	1563, 1890
BsiSI	CCGG	3 cut(s)	167, 1891, 2164
BslFI	GGGAC	2 cut(s)	420, 2174
BslI	CCNNNNNNNGG	5 cut(s)	424, 1892, 1897, 2033, 2383
BsmAI	GTCTC	5 cut(s)	278, 1076, 1123, 1218, 1773
BsmBI	CGTCTC	1 cut(s)	1076
BsmFI	GGGAC	2 cut(s)	420, 2174
BsnI	GGCC	8 cut(s)	1440, 1568, 1651, 1678, 1705, 1948, 2133, 2232
Bso31I	GGTCTC	2 cut(s)	1123, 1218
BsoBI	CYCGRG	2 cut(s)	1563, 1890
Bsp119I	TTCGAA	1 cut(s)	642
Bsp120I	GGGCCC	2 cut(s)	1566, 2230
Bsp1286I	GDGCHC	4 cut(s)	129, 1405, 1570, 2234
Bsp13I	TCCGGA	1 cut(s)	166
Bsp143I	GATC	8 cut(s)	59, 544, 1559, 1598, 1786, 1909, 2036, 2417
Bsp19I	CCATGG	1 cut(s)	1053
BspACI	CCGC	7 cut(s)	33, 257, 378, 512, 1465, 1634, 2227
BspANI	GGCC	8 cut(s)	1440, 1568, 1651, 1678, 1705, 1948, 2133, 2232
BspCNI	CTCAG	9 cut(s)	143, 280, 346, 358, 760, 1058, 1376, 1469, 1846
BspEI	TCCGGA	1 cut(s)	166
BspFNI	CGCG	2 cut(s)	35, 2227
BspHI	TCATGA	3 cut(s)	604, 1324, 2218
BspLI	GGNNCC	8 cut(s)	31, 136, 917, 1568, 1569, 2162, 2231, 2232
BspMAI	CTGCAG	1 cut(s)	250
BspMI	ACCTGC	5 cut(s)	1156, 1421, 1672, 1699, 1726
BspOI	GCTAGC	1 cut(s)	1770
BspPI	GGATC	4 cut(s)	1567, 1606, 2044, 2425
BspQI	GCTCTTC	2 cut(s)	591, 752
BspT104I	TTCGAA	1 cut(s)	642
BspT107I	GGYRCC	1 cut(s)	29
BspTNI	GGTCTC	2 cut(s)	1123, 1218
BsrI	ACTGG	4 cut(s)	150, 453, 1745, 2064
BssECI	CCNNGG	7 cut(s)	153, 1053, 1889, 1890, 1891, 2171, 2377
BssMI	GATC	8 cut(s)	59, 544, 1559, 1598, 1786, 1909, 2036, 2417
BssNI	GRCGYC	2 cut(s)	30, 1612
BssSI	CACGAG	1 cut(s)	2013
BssT1I	CCWWGG	3 cut(s)	153, 1053, 2171
Bst2BI	CACGAG	1 cut(s)	2013
Bst2UI	CCWGG	6 cut(s)	1145, 1675, 1702, 1843, 2034, 2415
Bst4CI	ACNGT	7 cut(s)	184, 580, 793, 1190, 1488, 1970, 2000
BstACI	GRCGYC	2 cut(s)	30, 1612
BstBAI	YACGTR	1 cut(s)	88
BstBI	TTCGAA	1 cut(s)	642
BstC8I	GCNNGC	7 cut(s)	868, 1110, 1266, 1270, 1405, 1638, 1768
BstDSI	CCRYGG	2 cut(s)	1053, 2377
BstF5I	GGATG	5 cut(s)	313, 538, 973, 1063, 2068
BstFNI	CGCG	2 cut(s)	35, 2227
BstH2I	RGCGCY	3 cut(s)	33, 68, 1557
BstHHI	GCGC	5 cut(s)	32, 67, 76, 1165, 1556
BstKTI	GATC	8 cut(s)	62, 547, 1562, 1601, 1789, 1912, 2039, 2420
BstMAI	GTCTC	5 cut(s)	278, 1076, 1123, 1218, 1773
BstMBI	GATC	8 cut(s)	59, 544, 1559, 1598, 1786, 1909, 2036, 2417
BstNI	CCWGG	6 cut(s)	1145, 1675, 1702, 1843, 2034, 2415
BstNSI	RCATGY	1 cut(s)	263
BstSCI	CCNGG	8 cut(s)	1143, 1673, 1700, 1841, 1889, 1890, 2032, 2413
BstSFI	CTRYAG	2 cut(s)	246, 1834
BstSLI	GKGCMC	2 cut(s)	1570, 2234
BstUI	CGCG	2 cut(s)	35, 2227
BstV1I	GCAGC	6 cut(s)	232, 260, 1318, 2041, 2208, 2295
BstV2I	GAAGAC	4 cut(s)	1505, 1615, 1744, 2014
BstX2I	RGATCY	2 cut(s)	1559, 1909
BstYI	RGATCY	2 cut(s)	1559, 1909
BsuI	GTATCC	1 cut(s)	1767
BsuRI	GGCC	8 cut(s)	1440, 1568, 1651, 1678, 1705, 1948, 2133, 2232
BtgI	CCRYGG	2 cut(s)	1053, 2377
BtgZI	GCGATG	1 cut(s)	2301
BtsCI	GGATG	5 cut(s)	313, 538, 973, 1063, 2068
BtsIMutI	CAGTG	3 cut(s)	143, 2005, 2057
BveI	ACCTGC	5 cut(s)	1156, 1421, 1672, 1699, 1726
Cac8I	GCNNGC	7 cut(s)	868, 1110, 1266, 1270, 1405, 1638, 1768
CciI	TCATGA	3 cut(s)	604, 1324, 2218
CfoI	GCGC	5 cut(s)	32, 67, 76, 1165, 1556
Cfr9I	CCCGGG	1 cut(s)	1890
CseI	GACGC	2 cut(s)	1058, 2033
Csp6I	GTAC	1 cut(s)	2302
CviQI	GTAC	1 cut(s)	2302
DinI	GGCGCC	1 cut(s)	31
DpnI	GATC	8 cut(s)	61, 546, 1561, 1600, 1788, 1911, 2038, 2419
DpnII	GATC	8 cut(s)	59, 544, 1559, 1598, 1786, 1909, 2036, 2417
DrdI	GACNNNNNNGTC	1 cut(s)	1449
DriI	GACNNNNNGTC	1 cut(s)	1465
DseDI	GACNNNNNNGTC	1 cut(s)	1449
Eam1105I	GACNNNNNGTC	1 cut(s)	1465
EciI	GGCGGA	1 cut(s)	1623
Ecl136II	GAGCTC	1 cut(s)	127
Eco130I	CCWWGG	3 cut(s)	153, 1053, 2171
Eco24I	GRGCYC	3 cut(s)	129, 1570, 2234
Eco31I	GGTCTC	2 cut(s)	1123, 1218
Eco47I	GGWCC	5 cut(s)	415, 517, 915, 2161, 2411
Eco53kI	GAGCTC	1 cut(s)	127
Eco57I	CTGAAG	3 cut(s)	261, 744, 1406
Eco72I	CACGTG	1 cut(s)	88
Eco88I	CYCGRG	2 cut(s)	1563, 1890
EcoICRI	GAGCTC	1 cut(s)	127
EcoO109I	RGGNCCY	5 cut(s)	517, 1567, 1650, 1704, 2230
EcoRI	GAATTC	1 cut(s)	1031
EcoRII	CCWGG	6 cut(s)	1143, 1673, 1700, 1841, 2032, 2413
EcoT14I	CCWWGG	3 cut(s)	153, 1053, 2171
EcoT38I	GRGCYC	3 cut(s)	129, 1570, 2234
EgeI	GGCGCC	1 cut(s)	31
EheI	GGCGCC	1 cut(s)	31
ErhI	CCWWGG	3 cut(s)	153, 1053, 2171
Esp3I	CGTCTC	1 cut(s)	1076
FalI	AAGNNNNNCTT	6 cut(s)	1163, 1195, 1248, 1280, 1754, 1786
FaqI	GGGAC	2 cut(s)	420, 2174
FauI	CCCGC	2 cut(s)	371, 2220
FauNDI	CATATG	4 cut(s)	902, 1240, 1729, 2050
FbaI	TGATCA	1 cut(s)	544
Fnu4HI	GCNGC	7 cut(s)	33, 246, 249, 1332, 2055, 2197, 2284
FokI	GGATG	5 cut(s)	320, 545, 980, 1070, 2075
FriOI	GRGCYC	3 cut(s)	129, 1570, 2234
Fsp4HI	GCNGC	7 cut(s)	33, 246, 249, 1332, 2055, 2197, 2284
GlaI	GCGC	5 cut(s)	31, 66, 75, 1164, 1555
GluI	GCNGC	7 cut(s)	33, 246, 249, 1332, 2055, 2197, 2284
GsuI	CTGGAG	3 cut(s)	470, 1728, 2356
HaeII	RGCGCY	3 cut(s)	33, 68, 1557
HaeIII	GGCC	8 cut(s)	1440, 1568, 1651, 1678, 1705, 1948, 2133, 2232
HapII	CCGG	3 cut(s)	167, 1891, 2164
HgaI	GACGC	2 cut(s)	1058, 2033
HhaI	GCGC	5 cut(s)	32, 67, 76, 1165, 1556
Hin1I	GRCGYC	2 cut(s)	30, 1612
Hin6I	GCGC	5 cut(s)	30, 65, 74, 1163, 1554
HinP1I	GCGC	5 cut(s)	30, 65, 74, 1163, 1554
HincII	GTYRAC	1 cut(s)	1003
HindII	GTYRAC	1 cut(s)	1003
HindIII	AAGCTT	2 cut(s)	924, 938
HpaII	CCGG	3 cut(s)	167, 1891, 2164
HphI	GGTGA	4 cut(s)	134, 172, 494, 730
Hpy166II	GTNNAC	2 cut(s)	1003, 1247
Hpy8I	GTNNAC	2 cut(s)	1003, 1247
Hpy99I	CGWCG	1 cut(s)	277
HpyAV	CCTTC	6 cut(s)	4, 1209, 1238, 1370, 1488, 2078
HpyCH4III	ACNGT	7 cut(s)	184, 580, 793, 1190, 1488, 1970, 2000
HpyCH4IV	ACGT	4 cut(s)	87, 977, 1216, 1612
HpySE526I	ACGT	4 cut(s)	87, 977, 1216, 1612
Hsp92I	GRCGYC	2 cut(s)	30, 1612
HspAI	GCGC	5 cut(s)	30, 65, 74, 1163, 1554
KasI	GGCGCC	1 cut(s)	29
Kpn2I	TCCGGA	1 cut(s)	166
Ksp22I	TGATCA	1 cut(s)	544
Kzo9I	GATC	8 cut(s)	59, 544, 1559, 1598, 1786, 1909, 2036, 2417
LguI	GCTCTTC	2 cut(s)	591, 752
LmnI	GCTCC	1 cut(s)	140
Lsp1109I	GCAGC	6 cut(s)	232, 260, 1318, 2041, 2208, 2295
LweI	GCATC	5 cut(s)	130, 610, 1039, 1048, 1870
MaeII	ACGT	4 cut(s)	87, 977, 1216, 1612
MaeIII	GTNAC	8 cut(s)	160, 718, 859, 896, 1194, 1309, 1994, 2396
MalI	GATC	8 cut(s)	61, 546, 1561, 1600, 1788, 1911, 2038, 2419
MboI	GATC	8 cut(s)	59, 544, 1559, 1598, 1786, 1909, 2036, 2417
MfeI	CAATTG	1 cut(s)	228
MflI	RGATCY	2 cut(s)	1559, 1909
MhlI	GDGCHC	4 cut(s)	129, 1405, 1570, 2234
MluCI	AATT	7 cut(s)	228, 401, 1031, 1349, 1938, 2203, 2364
Mly113I	GGCGCC	1 cut(s)	30
MlyI	GAGTC	2 cut(s)	157, 2216
MroI	TCCGGA	1 cut(s)	166
MroXI	GAANNNNTTC	3 cut(s)	1498, 1924, 2028
MseI	TTAA	6 cut(s)	114, 689, 816, 825, 942, 1170
MslI	CAYNNNNRTG	2 cut(s)	264, 606
MspA1I	CMGCKG	2 cut(s)	1465, 1826
MspI	CCGG	3 cut(s)	167, 1891, 2164
MspR9I	CCNGG	8 cut(s)	1145, 1675, 1702, 1843, 1891, 1892, 2034, 2415
MunI	CAATTG	1 cut(s)	228
MvaI	CCWGG	6 cut(s)	1145, 1675, 1702, 1843, 2034, 2415
MvnI	CGCG	2 cut(s)	35, 2227
NarI	GGCGCC	1 cut(s)	30
NciI	CCSGG	2 cut(s)	1891, 1892
NcoI	CCATGG	1 cut(s)	1053
NdeI	CATATG	4 cut(s)	902, 1240, 1729, 2050
NdeII	GATC	8 cut(s)	59, 544, 1559, 1598, 1786, 1909, 2036, 2417
NheI	GCTAGC	1 cut(s)	1766
NlaIV	GGNNCC	8 cut(s)	31, 136, 917, 1568, 1569, 2162, 2231, 2232
NmuCI	GTSAC	2 cut(s)	160, 718
NspI	RCATGY	1 cut(s)	263
NspV	TTCGAA	1 cut(s)	642
PagI	TCATGA	3 cut(s)	604, 1324, 2218
PaqCI	CACCTGC	3 cut(s)	1672, 1699, 1726
PciSI	GCTCTTC	2 cut(s)	591, 752
PdmI	GAANNNNTTC	3 cut(s)	1498, 1924, 2028
PflFI	GACNNNGTC	1 cut(s)	2112
PflMI	CCANNNNNTGG	1 cut(s)	424
PfoI	TCCNGGA	2 cut(s)	2032, 2413
PkrI	GCNGC	7 cut(s)	34, 247, 250, 1333, 2056, 2198, 2285
PleI	GAGTC	2 cut(s)	157, 2216
PluTI	GGCGCC	1 cut(s)	33
PmaCI	CACGTG	1 cut(s)	88
PmlI	CACGTG	1 cut(s)	88
PpsI	GAGTC	2 cut(s)	157, 2216
Ppu21I	YACGTR	1 cut(s)	88
PpuMI	RGGWCCY	1 cut(s)	517
Psp124BI	GAGCTC	1 cut(s)	129
Psp1406I	AACGTT	1 cut(s)	977
Psp5II	RGGWCCY	1 cut(s)	517
Psp6I	CCWGG	6 cut(s)	1143, 1673, 1700, 1841, 2032, 2413
PspCI	CACGTG	1 cut(s)	88
PspGI	CCWGG	6 cut(s)	1143, 1673, 1700, 1841, 2032, 2413
PspN4I	GGNNCC	8 cut(s)	31, 136, 917, 1568, 1569, 2162, 2231, 2232
PspOMI	GGGCCC	2 cut(s)	1566, 2230
PspPPI	RGGWCCY	1 cut(s)	517
PstI	CTGCAG	1 cut(s)	250
PsuI	RGATCY	2 cut(s)	1559, 1909
PsyI	GACNNNGTC	1 cut(s)	2112
PvuII	CAGCTG	1 cut(s)	1826
RsaI	GTAC	1 cut(s)	2303
RsaNI	GTAC	1 cut(s)	2302
RseI	CAYNNNNRTG	2 cut(s)	264, 606
SacI	GAGCTC	1 cut(s)	129
SapI	GCTCTTC	2 cut(s)	591, 752
SaqAI	TTAA	6 cut(s)	114, 689, 816, 825, 942, 1170
SatI	GCNGC	7 cut(s)	33, 246, 249, 1332, 2055, 2197, 2284
Sau3AI	GATC	8 cut(s)	59, 544, 1559, 1598, 1786, 1909, 2036, 2417
SchI	GAGTC	2 cut(s)	157, 2216
ScrFI	CCNGG	8 cut(s)	1145, 1675, 1702, 1843, 1891, 1892, 2034, 2415
SduI	GDGCHC	4 cut(s)	129, 1405, 1570, 2234
SfaNI	GCATC	5 cut(s)	130, 610, 1039, 1048, 1870
SfcI	CTRYAG	2 cut(s)	246, 1834
SfoI	GGCGCC	1 cut(s)	31
SfuI	TTCGAA	1 cut(s)	642
SinI	GGWCC	5 cut(s)	415, 517, 915, 2161, 2411
SmaI	CCCGGG	1 cut(s)	1892
SmiMI	CAYNNNNRTG	2 cut(s)	264, 606
SmlI	CTYRAG	1 cut(s)	68
SmoI	CTYRAG	1 cut(s)	68
Sse9I	AATT	7 cut(s)	228, 401, 1031, 1349, 1938, 2203, 2364
SsiI	CCGC	7 cut(s)	33, 257, 378, 512, 1465, 1634, 2227
SspDI	GGCGCC	1 cut(s)	29
SspI	AATATT	1 cut(s)	648
SstI	GAGCTC	1 cut(s)	129
StyD4I	CCNGG	8 cut(s)	1143, 1673, 1700, 1841, 1889, 1890, 2032, 2413
StyI	CCWWGG	3 cut(s)	153, 1053, 2171
TaaI	ACNGT	7 cut(s)	184, 580, 793, 1190, 1488, 1970, 2000
TaiI	ACGT	4 cut(s)	90, 980, 1219, 1615
TaqI	TCGA	4 cut(s)	275, 468, 642, 1012
TasI	AATT	7 cut(s)	228, 401, 1031, 1349, 1938, 2203, 2364
TatI	WGTACW	1 cut(s)	2301
TauI	GCSGC	1 cut(s)	35
Tru1I	TTAA	6 cut(s)	114, 689, 816, 825, 942, 1170
Tru9I	TTAA	6 cut(s)	114, 689, 816, 825, 942, 1170
TscAI	CASTG	3 cut(s)	150, 2005, 2064
TseFI	GTSAC	2 cut(s)	160, 718
TseI	GCWGC	6 cut(s)	245, 248, 1331, 2054, 2196, 2283
Tsp45I	GTSAC	2 cut(s)	160, 718
TspGWI	ACGGA	1 cut(s)	261
TspMI	CCCGGG	1 cut(s)	1890
TspRI	CASTG	3 cut(s)	150, 2005, 2064
Tth111I	GACNNNGTC	1 cut(s)	2112
Van91I	CCANNNNNTGG	1 cut(s)	424
VpaK11BI	GGWCC	5 cut(s)	415, 517, 915, 2161, 2411
XapI	RAATTY	3 cut(s)	1031, 1349, 2203
XbaI	TCTAGA	1 cut(s)	1412
XceI	RCATGY	1 cut(s)	263
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2380
XmaI	CCCGGG	1 cut(s)	1890
XmaJI	CCTAGG	1 cut(s)	2171
XmnI	GAANNNNTTC	3 cut(s)	1498, 1924, 2028
ZraI	GACGTC	1 cut(s)	1613

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.