Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0007307

Physical Location & Seq

Genomic Coordinates Forward (+)

8935911 .. 8946055

Gene Structure 10145 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g09210.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2406 bp

ATGCCTCCGAGGACGGTGAAGAGAGGTGCGGGGTCGGCCGGAACTAAGAGGACGACGAGGGCCACCAGAGGAGCTCCCAAGGCTCAGAACCAGGCCCAGCCTGATGCGCCCGAGGTATCGGTGCCGGTGGCCGAAGGTAAAGAGGAGCTCAAGGTGGAAAAGAAGCCAATTGTGGAGGAAGATCCCGTTGTTGAAGACAAGCCTGTTGCTATTGATCGCTCAGGGTTTGAAGTCGATGCGAAATCGGATCAGAACGGCTTCAAAAAACAAGATAAGGCTAAGGAATCTATAGATGATTATGAAAAAGATGAACGGCTAGAGCTGGAGGATGAACCTGAATATGAACCTGAAGAATATGTTGGGGTTGATTATGATGAGAAGGAGATTGAACAGGAGGATGCCCAGGAGGCCGAGGATGAAGGAGATGAGGATCCTGAGGAGAATCTAGGTGATGAAGAGGGTGATATGGCTGAGGAGGAAATGGAAGATGTACATGAAGAACTTGAAGGTGAAGAGTATGAGGAGCATGGTGGTGGGGACCATGAGCGTGAGCAAGAGCATGAGCATGAGCATGAGCATGCACAGATGGTTGATGCTGAGGAAGAGGAGCACCATGAAGTTGTGAAAGAGAGGCGGAAGCGCAAGGAGTTCGAAGTGTTTGTTGGTGGCTTAGACAAGGATGCAGATGAGACTGATCTTAGGAAAGCTTTTGGAGTAGTAGGTGAGGTTACTGAGGTTAGGTTGATGATGAACCCTCAGACTAAGAAGAACAAGGGATTTGCATTCTTACGTTTTGCAACTGTGGACCAAGCAAAACGAGCTGTTAGAGAGCTTAAACATCCAGTGATCAATGGGAAACAGTGTGGTGTTACTCCAAGTCAAGATAGTGATACCCTTTTTCTGGGTAACATCTGCAAAACATGGTCAAAGGATGCTTTGAAGGAGAAGTTGAAACATTATGGAGTAGATAATGTTGAGGATTTGACAGTAGTTGAAGATACTAATAATGAGGGAATGAACCGGGGCTTCGCTTTTTTGGAATTTTCATCTCGCTCAGATGCCATGGATGCCTTCAAGCGCCTTCAGAAAAGAGATATTGTGTTTGGAGTTGAAAGGCCTGCAAAGGTTTCTTTTGCAGATTCCTTCATTGACCCTGGTGATGAAATTATGGCCCAGGTTAAAACTATATTTGTGGATGGCCTACCTGCTTCATGGGACGAGGATTATGTTCAACAGCTTCTCAAGGACTATGGGGAGATTGAAAAGATTGAACTTGCTCGCAATATGCCTTCTGCCAAGAGGAAGGATTTTGGTTTTATTACATTTGACACTCATGAGAATGCGTTGACATGTGCTAATTGCATCAACAATGCAGAGATAGGTGAAGGGGACAATAAGGCAAAGCTTAGGGCAAGGTTGTCAAGACCTCTTCAGAGAGGGAAAGGCAAACATGTTGGTCGTGGTGATTATCGGTCCCCACGAGGGGATGGACGAGCTATCAGGGGTTCATGGGGGCGCCCTACACCACCAAGAAGTCTACCTGTGCGTGGATTAAGAGGAGTTGGAAGTCGTATCCCATCAACAAGTGTGAAGAGGCCTGTTGCACTGAGAGATAGACGCCCTATGGTCTCGTCTTATCCTGCTAGAGCCAGGCCTTTGCCTCCTCCTGCTAGGTCCTATGACAGGAGGCCACCTGTTCCAACCTACCCAAAGAGTAGCTTCAGAAGGGAATATAGTAGACGTGATGACCTTCCTCCACCAAGGAGTAGGGCAGTGGCTGATTATGGTTCAAGGGCTGTGCCAGAGAGACGCCAGTCATATAGAGATGAGTATAGTACACGTGGTCCTGCCTACGTTGACCCACCAAGAAGTACATCTCGTTCAACAACAAGAAGAGCTTATGTAGATGATGGTTATGGACAAAGGTTTGAAAGGCACCCTCCTCCTCCGCCTCCTCCTAGTTACCACCGTGAAGGCCGTGCTCGTGATTACGATTCTATTTCTGGGTCAAAGCGTCCATACTCTGCACTGGACGATGTTCCACCTAGATATGCTGATGCGGGCATTCGCCAATCAAGGGCAAGATTGGACTATGAATATGGAAGTGGTTCTTCTCAATATGGGGATGGCTATAGTGATAGAGTTGGGAGGTCTAGTTTAGGATATGGGAGTAGCCGGACAAGTCAGGATTCACACGGACTTTACAGCAGCCGTCAGAGCATGGGTTATGGAGGAGGTTCTTATGGTGGTAATGATGTTGGTGGAATGTACTCATCAAGCTATGGTGGTGATTATATGTCTCGCGGAAATGATGTTGGTGGTAGCTCTTACTCATCAATGTACTCTGGTCGTGGTGTTGGTGGAAGCAGTTATATGGGTTCAGGTGGTTCTGGCTCATACTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006417 GO:0007623 GO:0008150 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0016020 GO:0019219 GO:0019222 GO:0030425 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031328 GO:0032268 GO:0032270 GO:0032991 GO:0034248 GO:0034250 GO:0036477 GO:0042995 GO:0043005 GO:0043025 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044297 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044463 GO:0044464 GO:0045727 GO:0045934 GO:0048027 GO:0048511 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051247 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0070937 GO:0071204 GO:0080090 GO:0090365 GO:0090367 GO:0097159 GO:0097447 GO:0097458 GO:0120025 GO:0120038 GO:1901363 GO:1903311 GO:1903312 GO:1990635 GO:1990904 GO:2000112

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

RRM_1

Protein Analysis

802

Amino Acids

89.61

Weight (kDa)

5.32

Isoelectric Point (pI)

57.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	219 - 287	3.8e-17	RNA recognition motif
RRM_1	PF00076	299 - 365	6.8e-08	RNA recognition motif
RRM_1	PF00076	396 - 461	6.1e-11	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0007307)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44710 AT2G44710 AT2G44710 AT2G44710
fragaria_vesca	FvH4_7g09210
malus_domestica	MD02G1220100.v1.1 MD07G1096800.v1.1
prunus_persica	Prupe.2G120600_v2.0.a1 Prupe.2G120600_v2.0.a1 Prupe.2G120600_v2.0.a1 Prupe.2G120600_v2.0.a1
pyrus_communis	pycom02g18060 pycom07g07990
rosa_chinensis	RchiOBHm_Chr1g0345261
rosa_laevigata	RLG00000028843
rosa_multiflora	Rmu_sc0002329.1_g000009 Rmu_sc0003175.1_g000005 Rmu_sc0011244.1_g000001
rosa_roxburghii	Rroxscaffold_4G00309150
rosa_rugosa	Rorug01G0177000
rosa_samantha	Rh1AG195100 Rh1BG161200 Rh1CG179500 Rh1DG191600
rosa_wichuraiana	Rw1G016070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1213
AccB1I	GGYRCC	3 cut(s)	121, 1515, 1935
AccI	GTMKAC	2 cut(s)	1537, 1738
AccII	CGCG	1 cut(s)	2304
AciI	CCGC	5 cut(s)	29, 634, 1949, 2060, 2304
AclWI	GGATC	4 cut(s)	176, 255, 425, 438
AcoI	YGGCCR	2 cut(s)	36, 129
AcsI	RAATTY	1 cut(s)	1040
AcuI	CTGAAG	4 cut(s)	369, 1067, 1415, 1705
AcvI	CACGTG	1 cut(s)	1841
AcyI	GRCGYC	3 cut(s)	1516, 1618, 1810
AfaI	GTAC	5 cut(s)	492, 1837, 1873, 2270, 2342
AfiI	CCNNNNNNNGG	6 cut(s)	901, 1482, 1483, 1547, 1683, 2077
AflIII	ACRYGT	3 cut(s)	1349, 1450, 1838
AjiI	CACGTC	1 cut(s)	1742
AjnI	CCWGG	5 cut(s)	90, 402, 1153, 1173, 1649
AjuI	GAANNNNNNNTTGG	4 cut(s)	342, 374, 645, 677
Alw21I	GWGCWC	4 cut(s)	76, 150, 612, 1984
Alw26I	GTCTC	4 cut(s)	683, 1633, 1801, 2304
AlwI	GGATC	4 cut(s)	176, 255, 425, 438
AlwNI	CAGNNNCTG	1 cut(s)	1778
Ama87I	CYCGRG	1 cut(s)	110
ApeKI	GCWGC	1 cut(s)	2208
ApoI	RAATTY	1 cut(s)	1040
Asp700I	GAANNNNTTC	2 cut(s)	257, 2107
AspLEI	GCGC	4 cut(s)	109, 642, 1080, 1518
AspS9I	GGNCC	8 cut(s)	60, 94, 538, 805, 1171, 1473, 1674, 1844
AsuC2I	CCSGG	1 cut(s)	1022
AsuHPI	GGTGA	9 cut(s)	28, 461, 473, 521, 734, 1169, 1394, 1475, 2300
AsuII	TTCGAA	1 cut(s)	651
AvaI	CYCGRG	1 cut(s)	110
AvaII	GGWCC	5 cut(s)	538, 805, 1473, 1674, 1844
AxyI	CCTNAGG	1 cut(s)	435
BamHI	GGATCC	1 cut(s)	430
BanI	GGYRCC	3 cut(s)	121, 1515, 1935
BanII	GRGCYC	2 cut(s)	76, 150
BauI	CACGAG	2 cut(s)	1479, 1983
BbrPI	CACGTG	1 cut(s)	1841
BbsI	GAAGAC	1 cut(s)	201
Bbv12I	GWGCWC	4 cut(s)	76, 150, 612, 1984
BbvCI	CCTCAGC	2 cut(s)	471, 597
BbvI	GCAGC	1 cut(s)	2220
BccI	CCATC	6 cut(s)	580, 1190, 1481, 1585, 1904, 2120
BceAI	ACGGC	4 cut(s)	271, 329, 1962, 2196
BcgI	CGANNNNNNTGC	2 cut(s)	631, 665
BciT130I	CCWGG	5 cut(s)	92, 404, 1155, 1175, 1651
BciVI	GTATCC	1 cut(s)	1583
BclI	TGATCA	1 cut(s)	846
BcnI	CCSGG	1 cut(s)	1022
BcoDI	GTCTC	4 cut(s)	683, 1633, 1801, 2304
BfaI	CTAG	7 cut(s)	317, 446, 1644, 1671, 1959, 2046, 2154
BfmI	CTRYAG	2 cut(s)	288, 2131
BfoI	RGCGCY	2 cut(s)	1081, 1519
BfuAI	ACCTGC	1 cut(s)	1213
BfuI	GTATCC	1 cut(s)	1583
BglI	GCCNNNNNGGC	1 cut(s)	407
BisI	GCNGC	1 cut(s)	2209
BlsI	GCNGC	1 cut(s)	2210
Bme1390I	CCNGG	6 cut(s)	92, 404, 1022, 1155, 1175, 1651
Bme18I	GGWCC	5 cut(s)	538, 805, 1473, 1674, 1844
BmeT110I	CYCGRG	1 cut(s)	110
BmgBI	CACGTC	1 cut(s)	1742
BmgT120I	GGNCC	8 cut(s)	60, 94, 538, 805, 1171, 1473, 1674, 1844
BmiI	GGNNCC	6 cut(s)	123, 432, 539, 1475, 1517, 1937
BmrFI	CCNGG	6 cut(s)	92, 404, 1022, 1155, 1175, 1651
BoxI	GACNNNNGTC	1 cut(s)	1813
BpiI	GAAGAC	1 cut(s)	201
BpmI	CTGGAG	1 cut(s)	344
Bpu10I	CCTNAGC	5 cut(s)	220, 279, 471, 597, 1406
Bpu14I	TTCGAA	1 cut(s)	651
BpuEI	CTTGAG	2 cut(s)	134, 1226
BpuMI	CCSGG	1 cut(s)	1022
BsaAI	YACGTR	1 cut(s)	1841
BsaBI	GATNNNNATC	1 cut(s)	429
BsaHI	GRCGYC	3 cut(s)	1516, 1618, 1810
BsaI	GGTCTC	1 cut(s)	1633
BsaXI	ACNNNNNCTCC	2 cut(s)	2140, 2170
Bsc4I	CCNNNNNNNGG	6 cut(s)	901, 1482, 1483, 1547, 1683, 2077
Bse118I	RCCGGY	1 cut(s)	124
Bse1I	ACTGG	3 cut(s)	842, 1813, 2034
Bse21I	CCTNAGG	1 cut(s)	435
Bse8I	GATNNNNATC	1 cut(s)	429
BseBI	CCWGG	5 cut(s)	92, 404, 1155, 1175, 1651
BseJI	GATNNNNATC	1 cut(s)	429
BseLI	CCNNNNNNNGG	6 cut(s)	901, 1482, 1483, 1547, 1683, 2077
BseMII	CTCAG	9 cut(s)	98, 234, 426, 462, 588, 723, 770, 1068, 1598
BseNI	ACTGG	3 cut(s)	842, 1813, 2034
BseX3I	CGGCCG	1 cut(s)	36
BseXI	GCAGC	1 cut(s)	2220
BseYI	CCCAGC	1 cut(s)	96
BsgI	GTGCAG	1 cut(s)	2010
Bsh1236I	CGCG	1 cut(s)	2304
Bsh1285I	CGRYCG	1 cut(s)	39
BshNI	GGYRCC	3 cut(s)	121, 1515, 1935
BsiEI	CGRYCG	1 cut(s)	39
BsiHKAI	GWGCWC	4 cut(s)	76, 150, 612, 1984
BsiHKCI	CYCGRG	1 cut(s)	110
BsiSI	CCGG	4 cut(s)	39, 125, 1021, 2176
BslFI	GGGAC	4 cut(s)	551, 1229, 1403, 1459
BslI	CCNNNNNNNGG	6 cut(s)	901, 1482, 1483, 1547, 1683, 2077
BsmAI	GTCTC	4 cut(s)	683, 1633, 1801, 2304
BsmBI	CGTCTC	1 cut(s)	1801
BsmFI	GGGAC	4 cut(s)	551, 1229, 1403, 1459
BsmI	GAATGC	3 cut(s)	782, 1345, 2064
Bso31I	GGTCTC	1 cut(s)	1633
BsoBI	CYCGRG	1 cut(s)	110
Bsp119I	TTCGAA	1 cut(s)	651
Bsp1286I	GDGCHC	4 cut(s)	76, 150, 612, 1984
Bsp1407I	TGTACA	1 cut(s)	490
Bsp143I	GATC	6 cut(s)	181, 214, 247, 430, 694, 846
Bsp19I	CCATGG	1 cut(s)	1062
BspACI	CCGC	5 cut(s)	29, 634, 1949, 2060, 2304
BspCNI	CTCAG	9 cut(s)	97, 233, 427, 463, 589, 724, 769, 1067, 1599
BspFNI	CGCG	1 cut(s)	2304
BspHI	TCATGA	1 cut(s)	1333
BspLI	GGNNCC	6 cut(s)	123, 432, 539, 1475, 1517, 1937
BspMI	ACCTGC	1 cut(s)	1213
BspPI	GGATC	4 cut(s)	176, 255, 425, 438
BspQI	GCTCTTC	1 cut(s)	1888
BspT104I	TTCGAA	1 cut(s)	651
BspT107I	GGYRCC	3 cut(s)	121, 1515, 1935
BspTNI	GGTCTC	1 cut(s)	1633
BsrFI	RCCGGY	1 cut(s)	124
BsrGI	TGTACA	1 cut(s)	490
BsrI	ACTGG	3 cut(s)	842, 1813, 2034
BssAI	RCCGGY	1 cut(s)	124
BssMI	GATC	6 cut(s)	181, 214, 247, 430, 694, 846
BssNI	GRCGYC	3 cut(s)	1516, 1618, 1810
BssSI	CACGAG	2 cut(s)	1479, 1983
BssT1I	CCWWGG	3 cut(s)	78, 1062, 1760
Bst2BI	CACGAG	2 cut(s)	1479, 1983
Bst2UI	CCWGG	5 cut(s)	92, 404, 1155, 1175, 1651
Bst4CI	ACNGT	5 cut(s)	16, 802, 861, 988, 1970
Bst6I	CTCTTC	7 cut(s)	14, 450, 507, 597, 1434, 1586, 1888
BstACI	GRCGYC	3 cut(s)	1516, 1618, 1810
BstAUI	TGTACA	1 cut(s)	490
BstBAI	YACGTR	1 cut(s)	1841
BstBI	TTCGAA	1 cut(s)	651
BstC8I	GCNNGC	4 cut(s)	579, 1119, 1279, 2062
BstDSI	CCRYGG	1 cut(s)	1062
BstENI	CCTNNNNNAGG	1 cut(s)	1681
BstFNI	CGCG	1 cut(s)	2304
BstH2I	RGCGCY	2 cut(s)	1081, 1519
BstHHI	GCGC	4 cut(s)	109, 642, 1080, 1518
BstKTI	GATC	6 cut(s)	184, 217, 250, 433, 697, 849
BstMAI	GTCTC	4 cut(s)	683, 1633, 1801, 2304
BstMBI	GATC	6 cut(s)	181, 214, 247, 430, 694, 846
BstMCI	CGRYCG	1 cut(s)	39
BstMWI	GCNNNNNNNGC	7 cut(s)	35, 80, 106, 407, 818, 1067, 2217
BstNI	CCWGG	5 cut(s)	92, 404, 1155, 1175, 1651
BstNSI	RCATGY	3 cut(s)	581, 1353, 1454
BstPAI	GACNNNNGTC	1 cut(s)	1813
BstSCI	CCNGG	6 cut(s)	90, 402, 1020, 1153, 1173, 1649
BstSFI	CTRYAG	2 cut(s)	288, 2131
BstUI	CGCG	1 cut(s)	2304
BstV1I	GCAGC	1 cut(s)	2220
BstV2I	GAAGAC	1 cut(s)	201
BstX2I	RGATCY	2 cut(s)	181, 430
BstYI	RGATCY	2 cut(s)	181, 430
BstZI	CGGCCG	1 cut(s)	36
Bsu36I	CCTNAGG	1 cut(s)	435
BsuI	GTATCC	1 cut(s)	1583
BtgI	CCRYGG	1 cut(s)	1062
BtrI	CACGTC	1 cut(s)	1742
BtsI	GCAGTG	1 cut(s)	1779
BtsIMutI	CAGTG	5 cut(s)	849, 866, 1604, 1779, 2027
BveI	ACCTGC	1 cut(s)	1213
Cac8I	GCNNGC	4 cut(s)	579, 1119, 1279, 2062
CaiI	CAGNNNCTG	1 cut(s)	1778
CciI	TCATGA	1 cut(s)	1333
CfoI	GCGC	4 cut(s)	109, 642, 1080, 1518
Cfr10I	RCCGGY	1 cut(s)	124
Cfr13I	GGNCC	8 cut(s)	60, 94, 538, 805, 1171, 1473, 1674, 1844
CseI	GACGC	3 cut(s)	1626, 1818, 2003
Csp6I	GTAC	5 cut(s)	491, 1836, 1872, 2269, 2341
CviQI	GTAC	5 cut(s)	491, 1836, 1872, 2269, 2341
DinI	GGCGCC	1 cut(s)	1517
DpnI	GATC	6 cut(s)	183, 216, 249, 432, 696, 848
DpnII	GATC	6 cut(s)	181, 214, 247, 430, 694, 846
EaeI	YGGCCR	2 cut(s)	36, 129
EagI	CGGCCG	1 cut(s)	36
Eam1104I	CTCTTC	7 cut(s)	14, 450, 507, 597, 1434, 1586, 1888
EarI	CTCTTC	7 cut(s)	14, 450, 507, 597, 1434, 1586, 1888
EciI	GGCGGA	2 cut(s)	649, 1938
Ecl136II	GAGCTC	2 cut(s)	74, 148
EclXI	CGGCCG	1 cut(s)	36
Eco130I	CCWWGG	3 cut(s)	78, 1062, 1760
Eco147I	AGGCCT	3 cut(s)	1117, 1597, 1654
Eco24I	GRGCYC	2 cut(s)	76, 150
Eco31I	GGTCTC	1 cut(s)	1633
Eco47I	GGWCC	5 cut(s)	538, 805, 1473, 1674, 1844
Eco52I	CGGCCG	1 cut(s)	36
Eco53kI	GAGCTC	2 cut(s)	74, 148
Eco57I	CTGAAG	4 cut(s)	369, 1067, 1415, 1705
Eco72I	CACGTG	1 cut(s)	1841
Eco81I	CCTNAGG	1 cut(s)	435
Eco88I	CYCGRG	1 cut(s)	110
EcoICRI	GAGCTC	2 cut(s)	74, 148
EcoNI	CCTNNNNNAGG	1 cut(s)	1681
EcoO109I	RGGNCCY	1 cut(s)	1674
EcoRII	CCWGG	5 cut(s)	90, 402, 1153, 1173, 1649
EcoT14I	CCWWGG	3 cut(s)	78, 1062, 1760
EcoT38I	GRGCYC	2 cut(s)	76, 150
EgeI	GGCGCC	1 cut(s)	1517
EheI	GGCGCC	1 cut(s)	1517
ErhI	CCWWGG	3 cut(s)	78, 1062, 1760
Esp3I	CGTCTC	1 cut(s)	1801
FalI	AAGNNNNNCTT	6 cut(s)	1703, 1735, 1882, 1914, 2095, 2127
FaqI	GGGAC	4 cut(s)	551, 1229, 1403, 1459
FauI	CCCGC	2 cut(s)	22, 2053
FbaI	TGATCA	1 cut(s)	846
FblI	GTMKAC	2 cut(s)	1537, 1738
Fnu4HI	GCNGC	1 cut(s)	2209
FriOI	GRGCYC	2 cut(s)	76, 150
Fsp4HI	GCNGC	1 cut(s)	2209
FspBI	CTAG	7 cut(s)	317, 446, 1644, 1671, 1959, 2046, 2154
GlaI	GCGC	4 cut(s)	108, 641, 1079, 1517
GluI	GCNGC	1 cut(s)	2209
GsaI	CCCAGC	1 cut(s)	100
GsuI	CTGGAG	1 cut(s)	344
HaeII	RGCGCY	2 cut(s)	1081, 1519
HapII	CCGG	4 cut(s)	39, 125, 1021, 2176
HgaI	GACGC	3 cut(s)	1626, 1818, 2003
HhaI	GCGC	4 cut(s)	109, 642, 1080, 1518
Hin1I	GRCGYC	3 cut(s)	1516, 1618, 1810
Hin6I	GCGC	4 cut(s)	107, 640, 1078, 1516
HinP1I	GCGC	4 cut(s)	107, 640, 1078, 1516
HincII	GTYRAC	2 cut(s)	1347, 1858
HindII	GTYRAC	2 cut(s)	1347, 1858
HindIII	AAGCTT	2 cut(s)	705, 1403
HinfI	GANTC	5 cut(s)	284, 442, 1139, 1994, 2189
HpaII	CCGG	4 cut(s)	39, 125, 1021, 2176
HphI	GGTGA	9 cut(s)	28, 461, 473, 521, 734, 1169, 1394, 1475, 2300
Hpy166II	GTNNAC	6 cut(s)	805, 1347, 1538, 1739, 1838, 1858
Hpy188III	TCNNGA	6 cut(s)	434, 881, 1334, 1422, 1985, 2186
Hpy8I	GTNNAC	6 cut(s)	805, 1347, 1538, 1739, 1838, 1858
Hpy99I	CGWCG	1 cut(s)	58
HpyCH4III	ACNGT	5 cut(s)	16, 802, 861, 988, 1970
HpyCH4IV	ACGT	4 cut(s)	790, 1741, 1840, 1854
HpyF10VI	GCNNNNNNNGC	7 cut(s)	35, 80, 106, 407, 818, 1067, 2217
HpySE526I	ACGT	4 cut(s)	790, 1741, 1840, 1854
Hsp92I	GRCGYC	3 cut(s)	1516, 1618, 1810
HspAI	GCGC	4 cut(s)	107, 640, 1078, 1516
KasI	GGCGCC	1 cut(s)	1515
Ksp22I	TGATCA	1 cut(s)	846
Kzo9I	GATC	6 cut(s)	181, 214, 247, 430, 694, 846
LguI	GCTCTTC	1 cut(s)	1888
LmnI	GCTCC	5 cut(s)	71, 79, 145, 523, 607
Lsp1109I	GCAGC	1 cut(s)	2220
MaeI	CTAG	7 cut(s)	317, 446, 1644, 1671, 1959, 2046, 2154
MaeII	ACGT	4 cut(s)	790, 1741, 1840, 1854
MaeIII	GTNAC	4 cut(s)	727, 868, 905, 1961
MalI	GATC	6 cut(s)	183, 216, 249, 432, 696, 848
MboI	GATC	6 cut(s)	181, 214, 247, 430, 694, 846
MfeI	CAATTG	1 cut(s)	168
MflI	RGATCY	2 cut(s)	181, 430
MhlI	GDGCHC	4 cut(s)	76, 150, 612, 1984
MluCI	AATT	4 cut(s)	168, 1040, 1164, 1357
Mly113I	GGCGCC	1 cut(s)	1516
MmeI	TCCRAC	2 cut(s)	1543, 1724
MroXI	GAANNNNTTC	2 cut(s)	257, 2107
MseI	TTAA	3 cut(s)	834, 1179, 1553
MslI	CAYNNNNRTG	6 cut(s)	531, 546, 564, 570, 576, 1338
MspI	CCGG	4 cut(s)	39, 125, 1021, 2176
MspR9I	CCNGG	6 cut(s)	92, 404, 1022, 1155, 1175, 1651
MunI	CAATTG	1 cut(s)	168
Mva1269I	GAATGC	3 cut(s)	782, 1345, 2064
MvaI	CCWGG	5 cut(s)	92, 404, 1155, 1175, 1651
MvnI	CGCG	1 cut(s)	2304
MwoI	GCNNNNNNNGC	7 cut(s)	35, 80, 106, 407, 818, 1067, 2217
NarI	GGCGCC	1 cut(s)	1516
NciI	CCSGG	1 cut(s)	1022
NcoI	CCATGG	1 cut(s)	1062
NdeII	GATC	6 cut(s)	181, 214, 247, 430, 694, 846
NlaIV	GGNNCC	6 cut(s)	123, 432, 539, 1475, 1517, 1937
NmeAIII	GCCGAG	1 cut(s)	436
NspI	RCATGY	3 cut(s)	581, 1353, 1454
NspV	TTCGAA	1 cut(s)	651
PaeI	GCATGC	1 cut(s)	581
PagI	TCATGA	1 cut(s)	1333
PceI	AGGCCT	3 cut(s)	1117, 1597, 1654
PciI	ACATGT	2 cut(s)	1349, 1450
PciSI	GCTCTTC	1 cut(s)	1888
PcsI	WCGNNNNNNNCGW	1 cut(s)	1477
PctI	GAATGC	3 cut(s)	782, 1345, 2064
PdmI	GAANNNNTTC	2 cut(s)	257, 2107
PfeI	GAWTC	5 cut(s)	284, 442, 1139, 1994, 2189
PkrI	GCNGC	1 cut(s)	2210
PluTI	GGCGCC	1 cut(s)	1519
PmaCI	CACGTG	1 cut(s)	1841
PmlI	CACGTG	1 cut(s)	1841
Ppu21I	YACGTR	1 cut(s)	1841
PpuMI	RGGWCCY	1 cut(s)	1674
PscI	ACATGT	2 cut(s)	1349, 1450
PshAI	GACNNNNGTC	1 cut(s)	1813
Psp124BI	GAGCTC	2 cut(s)	76, 150
Psp5II	RGGWCCY	1 cut(s)	1674
Psp6I	CCWGG	5 cut(s)	90, 402, 1153, 1173, 1649
PspCI	CACGTG	1 cut(s)	1841
PspFI	CCCAGC	1 cut(s)	96
PspGI	CCWGG	5 cut(s)	90, 402, 1153, 1173, 1649
PspN4I	GGNNCC	6 cut(s)	123, 432, 539, 1475, 1517, 1937
PspPI	GGNCC	8 cut(s)	60, 94, 538, 805, 1171, 1473, 1674, 1844
PspPPI	RGGWCCY	1 cut(s)	1674
PsrI	GAACNNNNNNTAC	2 cut(s)	1864, 1896
PstNI	CAGNNNCTG	1 cut(s)	1778
PsuI	RGATCY	2 cut(s)	181, 430
RsaI	GTAC	5 cut(s)	492, 1837, 1873, 2270, 2342
RsaNI	GTAC	5 cut(s)	491, 1836, 1872, 2269, 2341
RseI	CAYNNNNRTG	6 cut(s)	531, 546, 564, 570, 576, 1338
SacI	GAGCTC	2 cut(s)	76, 150
SapI	GCTCTTC	1 cut(s)	1888
SaqAI	TTAA	3 cut(s)	834, 1179, 1553
SatI	GCNGC	1 cut(s)	2209
Sau3AI	GATC	6 cut(s)	181, 214, 247, 430, 694, 846
Sau96I	GGNCC	8 cut(s)	60, 94, 538, 805, 1171, 1473, 1674, 1844
ScrFI	CCNGG	6 cut(s)	92, 404, 1022, 1155, 1175, 1651
SduI	GDGCHC	4 cut(s)	76, 150, 612, 1984
SfcI	CTRYAG	2 cut(s)	288, 2131
SfoI	GGCGCC	1 cut(s)	1517
SfuI	TTCGAA	1 cut(s)	651
SinI	GGWCC	5 cut(s)	538, 805, 1473, 1674, 1844
SmiMI	CAYNNNNRTG	6 cut(s)	531, 546, 564, 570, 576, 1338
SmlI	CTYRAG	2 cut(s)	149, 1241
SmoI	CTYRAG	2 cut(s)	149, 1241
SphI	GCATGC	1 cut(s)	581
Sse9I	AATT	4 cut(s)	168, 1040, 1164, 1357
SseBI	AGGCCT	3 cut(s)	1117, 1597, 1654
SsiI	CCGC	5 cut(s)	29, 634, 1949, 2060, 2304
SspDI	GGCGCC	1 cut(s)	1515
SspMI	CTAG	7 cut(s)	317, 446, 1644, 1671, 1959, 2046, 2154
SstI	GAGCTC	2 cut(s)	76, 150
StuI	AGGCCT	3 cut(s)	1117, 1597, 1654
StyD4I	CCNGG	6 cut(s)	90, 402, 1020, 1153, 1173, 1649
StyI	CCWWGG	3 cut(s)	78, 1062, 1760
TaaI	ACNGT	5 cut(s)	16, 802, 861, 988, 1970
TaiI	ACGT	4 cut(s)	793, 1744, 1843, 1857
TaqI	TCGA	2 cut(s)	234, 651
TaqII	GACCGA	1 cut(s)	1461
TasI	AATT	4 cut(s)	168, 1040, 1164, 1357
TatI	WGTACW	5 cut(s)	490, 1835, 1871, 2268, 2340
TfiI	GAWTC	5 cut(s)	284, 442, 1139, 1994, 2189
Tru1I	TTAA	3 cut(s)	834, 1179, 1553
Tru9I	TTAA	3 cut(s)	834, 1179, 1553
TscAI	CASTG	5 cut(s)	849, 866, 1611, 1779, 2034
TseI	GCWGC	1 cut(s)	2208
TspGWI	ACGGA	1 cut(s)	2211
TspRI	CASTG	5 cut(s)	849, 866, 1611, 1779, 2034
VpaK11BI	GGWCC	5 cut(s)	538, 805, 1473, 1674, 1844
XagI	CCTNNNNNAGG	1 cut(s)	1681
XapI	RAATTY	1 cut(s)	1040
XceI	RCATGY	3 cut(s)	581, 1353, 1454
XmiI	GTMKAC	2 cut(s)	1537, 1738
XmnI	GAANNNNTTC	2 cut(s)	257, 2107
XspI	CTAG	7 cut(s)	317, 446, 1644, 1671, 1959, 2046, 2154

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.