Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0011244.1

Orthogroup ID

OG0007307

Physical Location & Seq

Genomic Coordinates Forward (+)

1 .. 3921

Gene Structure 3921 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0011244.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2180 bp

aacttgagtctcttttcactggaggaatcatcaaccttgattttatggcagaacaagataaggctaaggactctatagatgattatgaaaaagatgaacggctagagctggaggataatgaacctgaatatgaacccgaagaatatgttggcgttgattacgatgagaaggagattgaacaagaggatgcccaggaggctgaggatgaaggagatgaggatcctgaggagaatctaggtgaagaagagggtgatatggctgaggaggaaatggaagatgtacatgaagaaattgaaggtgaagaatatgaggagcgtggtggtgaggaccatgagcatgagcatgagcatgcacatgcacagatggttgacgccgaggaagaggagcaccatgaagttgtgaaagagaggcggaagcgcaaggaattcgaagtgtttgttggtggcttagacaaggatgcagatgaagctgatcttaggaaagcttttggtgtagttggtgaggttactgaggttagattgatgatgaaccctcagactaagaagaacaagggatttgcattcttgcgttttgcaactgtggaacaagcaaaacgagctgttagagagcttaaacatccagtgatcaatgggaaacaatgtggtgttactccaagtcaagatagtgataccctttttctgggtaacatctgcaaaacatggtcaaaggatgctttgaaggagaaattgaaacattatggagtagataatgttgaggatttgacagtagttgaagataccaataatgagggaatgaatcggggctttgcttttttggaattttcatctcgctcggatgccatggatgccttcaagcgccttcagaaaagagatattgtgtttggagttgaaaggcctgcaaaggtttcttttgcagattccttcattgaccctggtgatgaaattatggcgcaggttaaaactatatttgtggatggcctacctgcttcttgggacgaggattatgttcaacagcttcttaaggactatggggagattgaaaagatagagcttgctcgcaacatgccttctgccaagaggaaggattttggttttattacatttgacactcatgagaatgcattgacatgtgctaattgcatcaacaatgcagaaataggtgaaggggacaacaaggcaaagcttagggcaaggttgtcaagaccccttcagagagggaaaggcaaacatgtaggtcgtggtgattatcggtccccacggggggatggacgagttattaggggttcatgggggcgccctacaccaccacgtagtctacctatgcgtggattaagaggagttggaagtcgtatcccaccagccagtgtgaagaggcctgttggactgagagatagacgccccgcgatctcgtcttatcctgctagacccaggcctttgcctcctccagctaggtcctatgacaggaggccacctgttccggcctacccaaagagtagcttcagaagggaatatagtagacgggatgaccttcctcctccaaggagcagagcagcggctgattatggttcaagggctgtgccagagagacgccagtcatatagagatgactatagtacacgtggtcctgcttacgttgacccaccaagaagtacatctcgtacaacagcgaggagagcttatgtagatgacagttatggacaaaggtttgaaaggcaccctcccccacctcctcctagttaccaccgtgaaggtcgtgctcgtgattacgactctatttctgggtcaaagcgtccatactctgctctggacgatgttccacctcgatatgctgatactggcatccgccaatcaagggcacgattggactatgaatatggaagtggttcttctcaatatggggatggctatagtgatagagttgggaggtctagtttaggatatgggagcagcaggacaagtcaggattcacatggactttatagcagccgtcagagcatgggttatggaggaggttcttatggtggtaatgatgttggtgggatgtactcatcaagctacggtggtgattatatgtctcgtggaaatgatgttggaggtagctcttactcatcaatgtactccggtcgtggtgttggtggaagcagttatatgggttcaggtggttctggctcatactattga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006417 GO:0007623 GO:0008150 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0016020 GO:0019219 GO:0019222 GO:0030425 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031328 GO:0032268 GO:0032270 GO:0032991 GO:0034248 GO:0034250 GO:0036477 GO:0042995 GO:0043005 GO:0043025 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044297 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044463 GO:0044464 GO:0045727 GO:0045934 GO:0048027 GO:0048511 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051247 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0070937 GO:0071204 GO:0080090 GO:0090365 GO:0090367 GO:0097159 GO:0097447 GO:0097458 GO:0120025 GO:0120038 GO:1901363 GO:1903311 GO:1903312 GO:1990635 GO:1990904 GO:2000112

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

RRM_1

Protein Analysis

725

Amino Acids

81.4

Weight (kDa)

5.17

Isoelectric Point (pI)

60.33

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007307)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44710 AT2G44710 AT2G44710 AT2G44710
fragaria_vesca	FvH4_7g09210
malus_domestica	MD02G1220100.v1.1 MD07G1096800.v1.1
prunus_persica	Prupe.2G120600_v2.0.a1 Prupe.2G120600_v2.0.a1 Prupe.2G120600_v2.0.a1 Prupe.2G120600_v2.0.a1
pyrus_communis	pycom02g18060 pycom07g07990
rosa_chinensis	RchiOBHm_Chr1g0345261
rosa_laevigata	RLG00000028843
rosa_multiflora	Rmu_sc0002329.1_g000009 Rmu_sc0003175.1_g000005 Rmu_sc0011244.1_g000001
rosa_roxburghii	Rroxscaffold_4G00309150
rosa_rugosa	Rorug01G0177000
rosa_samantha	Rh1AG195100 Rh1BG161200 Rh1CG179500 Rh1DG191600
rosa_wichuraiana	Rw1G016070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	942, 990
AccB1I	GGYRCC	2 cut(s)	1292, 1712
AccI	GTMKAC	2 cut(s)	1314, 1515
AccII	CGCG	1 cut(s)	1402
AciI	CCGC	4 cut(s)	411, 1400, 1552, 1842
AclWI	GGATC	2 cut(s)	214, 227
AcsI	RAATTY	2 cut(s)	424, 817
AcuI	CTGAAG	3 cut(s)	844, 1192, 1482
AcvI	CACGTG	1 cut(s)	1618
AcyI	GRCGYC	4 cut(s)	371, 1293, 1395, 1587
AfaI	GTAC	6 cut(s)	281, 1614, 1650, 1659, 2044, 2116
AfiI	CCNNNNNNNGG	6 cut(s)	678, 1259, 1260, 1324, 1460, 1851
AflII	CTTAAG	1 cut(s)	1018
AflIII	ACRYGT	3 cut(s)	1126, 1227, 1615
AjnI	CCWGG	3 cut(s)	191, 930, 1426
AjuI	GAANNNNNNNTTGG	4 cut(s)	131, 163, 422, 454
Alw21I	GWGCWC	2 cut(s)	389, 1758
Alw26I	GTCTC	3 cut(s)	14, 1578, 2078
AlwI	GGATC	2 cut(s)	214, 227
AlwNI	CAGNNNCTG	1 cut(s)	1555
AoxI	GGCC	6 cut(s)	892, 975, 1372, 1429, 1465, 1478
ApeKI	GCWGC	3 cut(s)	1549, 1946, 1982
ApoI	RAATTY	2 cut(s)	424, 817
Asp700I	GAANNNNTTC	1 cut(s)	1881
AspLEI	GCGC	4 cut(s)	419, 857, 951, 1295
AspS9I	GGNCC	4 cut(s)	327, 1250, 1451, 1621
AsuHPI	GGTGA	9 cut(s)	250, 262, 310, 334, 511, 946, 1171, 1252, 2074
AsuII	TTCGAA	1 cut(s)	428
AvaII	GGWCC	4 cut(s)	327, 1250, 1451, 1621
AxyI	CCTNAGG	1 cut(s)	224
BaeGI	GKGCMC	1 cut(s)	1857
BamHI	GGATCC	1 cut(s)	219
BanI	GGYRCC	2 cut(s)	1292, 1712
BauI	CACGAG	2 cut(s)	1757, 2075
BbrPI	CACGTG	1 cut(s)	1618
Bbv12I	GWGCWC	2 cut(s)	389, 1758
BbvCI	CCTCAGC	2 cut(s)	200, 260
BbvI	GCAGC	3 cut(s)	1561, 1958, 1994
BccI	CCATC	4 cut(s)	357, 967, 1258, 1894
BceAI	ACGGC	2 cut(s)	115, 1970
BcgI	CGANNNNNNTGC	2 cut(s)	408, 442
BciT130I	CCWGG	3 cut(s)	193, 932, 1428
BciVI	GTATCC	1 cut(s)	1360
BclI	TGATCA	1 cut(s)	623
BcoDI	GTCTC	3 cut(s)	14, 1578, 2078
BfaI	CTAG	6 cut(s)	103, 235, 1421, 1448, 1733, 1928
BfmI	CTRYAG	3 cut(s)	74, 1608, 1905
BfoI	RGCGCY	2 cut(s)	858, 1296
BfrI	CTTAAG	1 cut(s)	1018
BfuAI	ACCTGC	2 cut(s)	942, 990
BfuI	GTATCC	1 cut(s)	1360
BglI	GCCNNNNNGGC	1 cut(s)	196
BisI	GCNGC	4 cut(s)	1550, 1553, 1947, 1983
BlsI	GCNGC	4 cut(s)	1551, 1554, 1948, 1984
Bme1390I	CCNGG	3 cut(s)	193, 932, 1428
Bme18I	GGWCC	4 cut(s)	327, 1250, 1451, 1621
BmgT120I	GGNCC	4 cut(s)	327, 1250, 1451, 1621
BmiI	GGNNCC	4 cut(s)	221, 1252, 1294, 1714
BmrFI	CCNGG	3 cut(s)	193, 932, 1428
BmsI	GCATC	7 cut(s)	177, 447, 699, 825, 834, 1148, 1847
BoxI	GACNNNNGTC	1 cut(s)	1590
BpmI	CTGGAG	3 cut(s)	41, 130, 1427
Bpu10I	CCTNAGC	4 cut(s)	65, 200, 260, 1183
Bpu14I	TTCGAA	1 cut(s)	428
BpuEI	CTTGAG	1 cut(s)	25
BsaAI	YACGTR	2 cut(s)	1309, 1618
BsaBI	GATNNNNATC	1 cut(s)	218
BsaHI	GRCGYC	4 cut(s)	371, 1293, 1395, 1587
BsaJI	CCNNGG	7 cut(s)	191, 374, 839, 930, 1255, 1426, 1537
BsaWI	WCCGGW	1 cut(s)	2119
BsaXI	ACNNNNNCTCC	2 cut(s)	1914, 1944
Bsc4I	CCNNNNNNNGG	6 cut(s)	678, 1259, 1260, 1324, 1460, 1851
Bse1I	ACTGG	5 cut(s)	24, 619, 1361, 1590, 1839
Bse21I	CCTNAGG	1 cut(s)	224
Bse8I	GATNNNNATC	1 cut(s)	218
BseBI	CCWGG	3 cut(s)	193, 932, 1428
BseDI	CCNNGG	7 cut(s)	191, 374, 839, 930, 1255, 1426, 1537
BseJI	GATNNNNATC	1 cut(s)	218
BseLI	CCNNNNNNNGG	6 cut(s)	678, 1259, 1260, 1324, 1460, 1851
BseMII	CTCAG	6 cut(s)	191, 215, 251, 500, 547, 1375
BseNI	ACTGG	5 cut(s)	24, 619, 1361, 1590, 1839
BseSI	GKGCMC	1 cut(s)	1857
BseXI	GCAGC	3 cut(s)	1561, 1958, 1994
Bsh1236I	CGCG	1 cut(s)	1402
Bsh1285I	CGRYCG	1 cut(s)	2124
BshFI	GGCC	6 cut(s)	894, 977, 1374, 1431, 1467, 1480
BshNI	GGYRCC	2 cut(s)	1292, 1712
BsiEI	CGRYCG	1 cut(s)	2124
BsiHKAI	GWGCWC	2 cut(s)	389, 1758
BsiSI	CCGG	2 cut(s)	1477, 2120
BslFI	GGGAC	3 cut(s)	1006, 1180, 1236
BslI	CCNNNNNNNGG	6 cut(s)	678, 1259, 1260, 1324, 1460, 1851
BsmAI	GTCTC	3 cut(s)	14, 1578, 2078
BsmBI	CGTCTC	1 cut(s)	1578
BsmFI	GGGAC	3 cut(s)	1006, 1180, 1236
BsmI	GAATGC	2 cut(s)	559, 1122
BsnI	GGCC	6 cut(s)	894, 977, 1374, 1431, 1467, 1480
Bsp119I	TTCGAA	1 cut(s)	428
Bsp1286I	GDGCHC	3 cut(s)	389, 1758, 1857
Bsp1407I	TGTACA	1 cut(s)	279
Bsp143I	GATC	4 cut(s)	219, 471, 623, 1403
Bsp19I	CCATGG	1 cut(s)	839
BspACI	CCGC	4 cut(s)	411, 1400, 1552, 1842
BspANI	GGCC	6 cut(s)	894, 977, 1374, 1431, 1467, 1480
BspCNI	CTCAG	6 cut(s)	192, 216, 252, 501, 546, 1376
BspFNI	CGCG	1 cut(s)	1402
BspHI	TCATGA	1 cut(s)	1110
BspLI	GGNNCC	4 cut(s)	221, 1252, 1294, 1714
BspMI	ACCTGC	2 cut(s)	942, 990
BspPI	GGATC	2 cut(s)	214, 227
BspT104I	TTCGAA	1 cut(s)	428
BspT107I	GGYRCC	2 cut(s)	1292, 1712
BspTI	CTTAAG	1 cut(s)	1018
BsrGI	TGTACA	1 cut(s)	279
BsrI	ACTGG	5 cut(s)	24, 619, 1361, 1590, 1839
BssECI	CCNNGG	7 cut(s)	191, 374, 839, 930, 1255, 1426, 1537
BssMI	GATC	4 cut(s)	219, 471, 623, 1403
BssNI	GRCGYC	4 cut(s)	371, 1293, 1395, 1587
BssSI	CACGAG	2 cut(s)	1757, 2075
BssT1I	CCWWGG	2 cut(s)	839, 1537
Bst2BI	CACGAG	2 cut(s)	1757, 2075
Bst2UI	CCWGG	3 cut(s)	193, 932, 1428
Bst4CI	ACNGT	5 cut(s)	579, 765, 1690, 1744, 2059
Bst6I	CTCTTC	3 cut(s)	239, 374, 1363
BstACI	GRCGYC	4 cut(s)	371, 1293, 1395, 1587
BstAFI	CTTAAG	1 cut(s)	1018
BstAUI	TGTACA	1 cut(s)	279
BstBAI	YACGTR	2 cut(s)	1309, 1618
BstBI	TTCGAA	1 cut(s)	428
BstC8I	GCNNGC	4 cut(s)	350, 896, 1052, 1056
BstDSI	CCRYGG	2 cut(s)	839, 1255
BstENI	CCTNNNNNAGG	1 cut(s)	1458
BstFNI	CGCG	1 cut(s)	1402
BstH2I	RGCGCY	2 cut(s)	858, 1296
BstHHI	GCGC	4 cut(s)	419, 857, 951, 1295
BstKTI	GATC	4 cut(s)	222, 474, 626, 1406
BstMAI	GTCTC	3 cut(s)	14, 1578, 2078
BstMBI	GATC	4 cut(s)	219, 471, 623, 1403
BstMCI	CGRYCG	1 cut(s)	2124
BstMWI	GCNNNNNNNGC	6 cut(s)	196, 466, 595, 844, 1672, 1991
BstNI	CCWGG	3 cut(s)	193, 932, 1428
BstNSI	RCATGY	5 cut(s)	352, 358, 1065, 1130, 1231
BstPAI	GACNNNNGTC	1 cut(s)	1590
BstSCI	CCNGG	3 cut(s)	191, 930, 1426
BstSFI	CTRYAG	3 cut(s)	74, 1608, 1905
BstSLI	GKGCMC	1 cut(s)	1857
BstUI	CGCG	1 cut(s)	1402
BstV1I	GCAGC	3 cut(s)	1561, 1958, 1994
BstX2I	RGATCY	1 cut(s)	219
BstYI	RGATCY	1 cut(s)	219
Bsu36I	CCTNAGG	1 cut(s)	224
BsuI	GTATCC	1 cut(s)	1360
BsuRI	GGCC	6 cut(s)	894, 977, 1374, 1431, 1467, 1480
BtgI	CCRYGG	2 cut(s)	839, 1255
BtsIMutI	CAGTG	3 cut(s)	17, 626, 1368
BveI	ACCTGC	2 cut(s)	942, 990
Cac8I	GCNNGC	4 cut(s)	350, 896, 1052, 1056
CaiI	CAGNNNCTG	1 cut(s)	1555
CciI	TCATGA	1 cut(s)	1110
CfoI	GCGC	4 cut(s)	419, 857, 951, 1295
Cfr13I	GGNCC	4 cut(s)	327, 1250, 1451, 1621
CseI	GACGC	4 cut(s)	379, 1403, 1595, 1777
Csp6I	GTAC	6 cut(s)	280, 1613, 1649, 1658, 2043, 2115
CviQI	GTAC	6 cut(s)	280, 1613, 1649, 1658, 2043, 2115
DinI	GGCGCC	1 cut(s)	1294
DpnI	GATC	4 cut(s)	221, 473, 625, 1405
DpnII	GATC	4 cut(s)	219, 471, 623, 1403
Eam1104I	CTCTTC	3 cut(s)	239, 374, 1363
EarI	CTCTTC	3 cut(s)	239, 374, 1363
EciI	GGCGGA	2 cut(s)	426, 1831
Eco130I	CCWWGG	2 cut(s)	839, 1537
Eco147I	AGGCCT	3 cut(s)	894, 1374, 1431
Eco47I	GGWCC	4 cut(s)	327, 1250, 1451, 1621
Eco57I	CTGAAG	3 cut(s)	844, 1192, 1482
Eco72I	CACGTG	1 cut(s)	1618
Eco81I	CCTNAGG	1 cut(s)	224
EcoNI	CCTNNNNNAGG	1 cut(s)	1458
EcoO109I	RGGNCCY	1 cut(s)	1451
EcoRI	GAATTC	1 cut(s)	424
EcoRII	CCWGG	3 cut(s)	191, 930, 1426
EcoT14I	CCWWGG	2 cut(s)	839, 1537
EcoT22I	ATGCAT	1 cut(s)	1122
EgeI	GGCGCC	1 cut(s)	1294
EheI	GGCGCC	1 cut(s)	1294
ErhI	CCWWGG	2 cut(s)	839, 1537
Esp3I	CGTCTC	1 cut(s)	1578
FalI	AAGNNNNNCTT	6 cut(s)	458, 490, 1480, 1512, 1869, 1901
FaqI	GGGAC	3 cut(s)	1006, 1180, 1236
FauI	CCCGC	1 cut(s)	1407
FbaI	TGATCA	1 cut(s)	623
FblI	GTMKAC	2 cut(s)	1314, 1515
Fnu4HI	GCNGC	4 cut(s)	1550, 1553, 1947, 1983
Fsp4HI	GCNGC	4 cut(s)	1550, 1553, 1947, 1983
FspBI	CTAG	6 cut(s)	103, 235, 1421, 1448, 1733, 1928
GlaI	GCGC	4 cut(s)	418, 856, 950, 1294
GluI	GCNGC	4 cut(s)	1550, 1553, 1947, 1983
GsuI	CTGGAG	3 cut(s)	41, 130, 1427
HaeII	RGCGCY	2 cut(s)	858, 1296
HaeIII	GGCC	6 cut(s)	894, 977, 1374, 1431, 1467, 1480
HapII	CCGG	2 cut(s)	1477, 2120
HgaI	GACGC	4 cut(s)	379, 1403, 1595, 1777
HhaI	GCGC	4 cut(s)	419, 857, 951, 1295
Hin1I	GRCGYC	4 cut(s)	371, 1293, 1395, 1587
Hin6I	GCGC	4 cut(s)	417, 855, 949, 1293
HinP1I	GCGC	4 cut(s)	417, 855, 949, 1293
HincII	GTYRAC	2 cut(s)	369, 1635
HindII	GTYRAC	2 cut(s)	369, 1635
HindIII	AAGCTT	2 cut(s)	482, 1180
HinfI	GANTC	8 cut(s)	7, 26, 70, 231, 795, 916, 1768, 1963
HpaII	CCGG	2 cut(s)	1477, 2120
HphI	GGTGA	9 cut(s)	250, 262, 310, 334, 511, 946, 1171, 1252, 2074
Hpy166II	GTNNAC	5 cut(s)	369, 1315, 1516, 1615, 1635
Hpy188I	TCNGA	6 cut(s)	536, 834, 863, 1211, 1501, 1991
Hpy188III	TCNNGA	7 cut(s)	223, 658, 1111, 1199, 1759, 1804, 1960
Hpy8I	GTNNAC	5 cut(s)	369, 1315, 1516, 1615, 1635
HpyCH4III	ACNGT	5 cut(s)	579, 765, 1690, 1744, 2059
HpyCH4IV	ACGT	3 cut(s)	1308, 1617, 1631
HpyF10VI	GCNNNNNNNGC	6 cut(s)	196, 466, 595, 844, 1672, 1991
HpySE526I	ACGT	3 cut(s)	1308, 1617, 1631
Hsp92I	GRCGYC	4 cut(s)	371, 1293, 1395, 1587
HspAI	GCGC	4 cut(s)	417, 855, 949, 1293
KasI	GGCGCC	1 cut(s)	1292
Ksp22I	TGATCA	1 cut(s)	623
Kzo9I	GATC	4 cut(s)	219, 471, 623, 1403
LmnI	GCTCC	4 cut(s)	312, 384, 1541, 1943
Lsp1109I	GCAGC	3 cut(s)	1561, 1958, 1994
LweI	GCATC	7 cut(s)	177, 447, 699, 825, 834, 1148, 1847
MaeI	CTAG	6 cut(s)	103, 235, 1421, 1448, 1733, 1928
MaeII	ACGT	3 cut(s)	1308, 1617, 1631
MaeIII	GTNAC	4 cut(s)	504, 645, 682, 1735
MalI	GATC	4 cut(s)	221, 473, 625, 1405
MboI	GATC	4 cut(s)	219, 471, 623, 1403
MflI	RGATCY	1 cut(s)	219
MhlI	GDGCHC	3 cut(s)	389, 1758, 1857
MluCI	AATT	6 cut(s)	290, 424, 724, 817, 941, 1134
Mly113I	GGCGCC	1 cut(s)	1293
MlyI	GAGTC	3 cut(s)	16, 64, 1762
MmeI	TCCRAC	3 cut(s)	1320, 1359, 2070
Mph1103I	ATGCAT	1 cut(s)	1122
MroXI	GAANNNNTTC	1 cut(s)	1881
MseI	TTAA	4 cut(s)	611, 956, 1019, 1330
MslI	CAYNNNNRTG	6 cut(s)	335, 341, 347, 353, 1115, 1125
MspA1I	CMGCKG	1 cut(s)	1552
MspCI	CTTAAG	1 cut(s)	1018
MspI	CCGG	2 cut(s)	1477, 2120
MspR9I	CCNGG	3 cut(s)	193, 932, 1428
Mva1269I	GAATGC	2 cut(s)	559, 1122
MvaI	CCWGG	3 cut(s)	193, 932, 1428
MvnI	CGCG	1 cut(s)	1402
MwoI	GCNNNNNNNGC	6 cut(s)	196, 466, 595, 844, 1672, 1991
NarI	GGCGCC	1 cut(s)	1293
NcoI	CCATGG	1 cut(s)	839
NdeII	GATC	4 cut(s)	219, 471, 623, 1403
NlaIV	GGNNCC	4 cut(s)	221, 1252, 1294, 1714
NmeAIII	GCCGAG	1 cut(s)	399
NsiI	ATGCAT	1 cut(s)	1122
NspI	RCATGY	5 cut(s)	352, 358, 1065, 1130, 1231
NspV	TTCGAA	1 cut(s)	428
PaeI	GCATGC	1 cut(s)	352
PagI	TCATGA	1 cut(s)	1110
PceI	AGGCCT	3 cut(s)	894, 1374, 1431
PciI	ACATGT	2 cut(s)	1126, 1227
PctI	GAATGC	2 cut(s)	559, 1122
PdmI	GAANNNNTTC	1 cut(s)	1881
PfeI	GAWTC	5 cut(s)	26, 231, 795, 916, 1963
PkrI	GCNGC	4 cut(s)	1551, 1554, 1948, 1984
PleI	GAGTC	3 cut(s)	15, 64, 1762
PluTI	GGCGCC	1 cut(s)	1296
PmaCI	CACGTG	1 cut(s)	1618
PmlI	CACGTG	1 cut(s)	1618
PpsI	GAGTC	3 cut(s)	15, 64, 1762
Ppu21I	YACGTR	2 cut(s)	1309, 1618
PpuMI	RGGWCCY	1 cut(s)	1451
PscI	ACATGT	2 cut(s)	1126, 1227
PshAI	GACNNNNGTC	1 cut(s)	1590
Psp5II	RGGWCCY	1 cut(s)	1451
Psp6I	CCWGG	3 cut(s)	191, 930, 1426
PspCI	CACGTG	1 cut(s)	1618
PspGI	CCWGG	3 cut(s)	191, 930, 1426
PspN4I	GGNNCC	4 cut(s)	221, 1252, 1294, 1714
PspPI	GGNCC	4 cut(s)	327, 1250, 1451, 1621
PspPPI	RGGWCCY	1 cut(s)	1451
PstNI	CAGNNNCTG	1 cut(s)	1555
PsuI	RGATCY	1 cut(s)	219
RsaI	GTAC	6 cut(s)	281, 1614, 1650, 1659, 2044, 2116
RsaNI	GTAC	6 cut(s)	280, 1613, 1649, 1658, 2043, 2115
RseI	CAYNNNNRTG	6 cut(s)	335, 341, 347, 353, 1115, 1125
SaqAI	TTAA	4 cut(s)	611, 956, 1019, 1330
SatI	GCNGC	4 cut(s)	1550, 1553, 1947, 1983
Sau3AI	GATC	4 cut(s)	219, 471, 623, 1403
Sau96I	GGNCC	4 cut(s)	327, 1250, 1451, 1621
SchI	GAGTC	3 cut(s)	16, 64, 1762
ScrFI	CCNGG	3 cut(s)	193, 932, 1428
SduI	GDGCHC	3 cut(s)	389, 1758, 1857
SfaNI	GCATC	7 cut(s)	177, 447, 699, 825, 834, 1148, 1847
SfcI	CTRYAG	3 cut(s)	74, 1608, 1905
SfoI	GGCGCC	1 cut(s)	1294
SfuI	TTCGAA	1 cut(s)	428
SinI	GGWCC	4 cut(s)	327, 1250, 1451, 1621
SmiMI	CAYNNNNRTG	6 cut(s)	335, 341, 347, 353, 1115, 1125
SmlI	CTYRAG	2 cut(s)	4, 1018
SmoI	CTYRAG	2 cut(s)	4, 1018
SphI	GCATGC	1 cut(s)	352
Sse9I	AATT	6 cut(s)	290, 424, 724, 817, 941, 1134
SseBI	AGGCCT	3 cut(s)	894, 1374, 1431
SsiI	CCGC	4 cut(s)	411, 1400, 1552, 1842
SspDI	GGCGCC	1 cut(s)	1292
SspMI	CTAG	6 cut(s)	103, 235, 1421, 1448, 1733, 1928
StuI	AGGCCT	3 cut(s)	894, 1374, 1431
StyD4I	CCNGG	3 cut(s)	191, 930, 1426
StyI	CCWWGG	2 cut(s)	839, 1537
TaaI	ACNGT	5 cut(s)	579, 765, 1690, 1744, 2059
TaiI	ACGT	3 cut(s)	1311, 1620, 1634
TaqI	TCGA	2 cut(s)	428, 1821
TaqII	GACCGA	1 cut(s)	1238
TasI	AATT	6 cut(s)	290, 424, 724, 817, 941, 1134
TatI	WGTACW	5 cut(s)	279, 1612, 1648, 2042, 2114
TauI	GCSGC	1 cut(s)	1555
TfiI	GAWTC	5 cut(s)	26, 231, 795, 916, 1963
Tru1I	TTAA	4 cut(s)	611, 956, 1019, 1330
Tru9I	TTAA	4 cut(s)	611, 956, 1019, 1330
TscAI	CASTG	3 cut(s)	24, 626, 1368
TseI	GCWGC	3 cut(s)	1549, 1946, 1982
TspRI	CASTG	3 cut(s)	24, 626, 1368
Vha464I	CTTAAG	1 cut(s)	1018
VpaK11BI	GGWCC	4 cut(s)	327, 1250, 1451, 1621
XagI	CCTNNNNNAGG	1 cut(s)	1458
XapI	RAATTY	2 cut(s)	424, 817
XceI	RCATGY	5 cut(s)	352, 358, 1065, 1130, 1231
XmiI	GTMKAC	2 cut(s)	1314, 1515
XmnI	GAANNNNTTC	1 cut(s)	1881
XspI	CTAG	6 cut(s)	103, 235, 1421, 1448, 1733, 1928
Zsp2I	ATGCAT	1 cut(s)	1122

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.