Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0007307

Physical Location & Seq

Genomic Coordinates Forward (+)

16332725 .. 16337616

Gene Structure 4892 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g18060.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2493 bp

ATGCACACAGATTCCTCGACCTTAACCCGCAAGGGGTTTTTTTGTTTGGGTTTGTTTTGGGGAATTTGTGGAGTTTTGGGCAATTCGACTGCGAAAACCATGCCTCCGAGGACGGTGAAGAGAGGTGCGGCGGCGGGAGCCAAGAGGACGACCAGAGTCACAAGGGGGACGAACAAGGCCCAGAACCGGGTCCAGCATGAGGCTCCTGACCAGTCGGCGATGGCCGAAGTCGAGGATGCGGTGCCGATGATGGAAAGTAAAGAGGATCTCAATGTTGAAGAGATTAAGGAGAAGCCAATTGAGGCGTACAATCCGGTGGTTGTCGTGGAGAAATCAGTTGTTGATGAAAAAGCTTCCGTTATTGATCAGCCAGGGCCTTCAGAGATGGAAGTCCAAGCGAAAGCAGAGCAGAACGGATTAAAAAAACAAGATAAGGTTAGGGAGTCTATAGATGATTATGAAAAAGATGAACGATTAGAGCTGGAGGATAATGAAGCTGAGTATGAACCTGAAGAAGATGGTGGGGTTGATTATGATGAGAAGGAAATGGAGCAAGGGGATGTCCAAGAGGTTGGGGATGAAGGAGATGAAGAACCTGAGGAGATTGTAGGTGAAGAAGAAGGTGACATGGCCGAGGAGGAGTTGGAAGATGTTCATGAAGAACTCGAGGGTGAAGAGTATGAGGAGCATGAGCATGCAGAGATGGTTGACGAGGAAGAGGAGCACCATGAACTTGTAAAGGAGAGACAGAAGCGCAAGGAGTTTGAAGTATTTGTTGGTGGTCTAGACAAGGATGCAAGTGTGGCTGATCTTAGGAAAGCTTTTGCTGGTGTTGGTGAAGTTACTGAGGTCAGGCTGATGATGAACCCTCAGACTAAGAAGAACAAGGGATTTGCATTCTTGCATTTTGCAACTGTGGAACAAGCAAGACGAGCAGTTACAGAGCTTAAACATCCAGTGATTAATGGAAAACAGTGTGGTGTTACTCCAAGTCAAGACAGTGATACTCTTTTTCTGGGTAACATATGCAAGACATGGACAAAGAATGCTTTGAGAGAGAAGTTGAAACATTATGGAGTACTTAATGTTGAGGATTTGACAGTGGTCGAAGATACTAACAATGAGGGAATGAATCGGGGCTTTGCTTTTTTGGAGTTTTCATCTCGTTCAGATGCCATGGATGCTTTTAAGCGACTTCAGAAAAGAGATATCGTGTTTGGAGTTGATAGGCCTGCAAAAGTTTCTTTTGCAGATTCCTTCATCGATCCTGGTGATGAAATCACGGCACAGGTGAAAACTGTGTTTGTGGATGGCCTACCTGCTTCATGGGATGAGGATCATGTCCGAGATCTTGTTAAGGAATATGGGGATGTTGAAAAGATTGAGCTTGCGCGTAACATGCCCTCTGCTAAGAGGAAAGATTTTGGTTTTGTTACATTTGACACTCATGAGGCTGCAGTTACATGTGCTAAAAGCATTAACAATGCAGAGCTAGGTGAAGGAGACAGCAAGGCGAAAATCAGGGCGAGGTTATCAAGACCGCTTCAGAGGGGTAAAGGAAGACATGTTGGACGTGGAGATTATCGATCTTCAAGGGGGGTTGGACGAGTTGTTAGGGGTTCATGGGGTCACCCAGCATCGCGCGGGTTAAGGGGAGTTGGAAGTCGAATTCCACCAGCCAGTGTAAAAAGGCCTGTTGAGCTAAGAGATAGACGCCCTATGATGTCATCTTATCCACCAAGAGGCAGGCCTTTGCCTCCTCCAGTTAGGTCCTATGACAGGAGACCACCTGTTCCAGCTTACCCAAAGAGTAGCTTCAAGAGGGAATATAGTAGGCGCGAGGACCTTCCTCCAAGGAGTAGAGCAGCCTCTGATTATGGATCAAGGGCTGTTCAAGAAAGACGCCAATCGTACAGAGATGACTACACTCCACATGGTCCTGCCTACTCTGATCCACTGAGAAGAAGTACCTCTTGTACAGCAGGAAGGAGAGCTTATGTTGATGAAGGTTATGGACAGCGATATGAAAGGCATCCTCCCCCTCCTCCAAGTTACCGTGAAGGGCGTGCACGTGAATATGACTCTATTTCTGGTTCAAAACGTCCCTACGCTGCACTGGATGATGTTCCTCCCCGTTATGCTGATGTGCCCATCTGCCAATCCAGGGCACGGTTAGACTATGAGTACGGAAGCGGTTCATCTCAATATGGGGATGGCTATAGTGACAGACTTGGGAGATCTAGTATGGGATATGGAAGCAGCAGAACAAGTCAGGATTCTCATGGACTATACAGCAGTCGTCAGGGCATGGACTATGGAGGAGATTCTTATGGTAGCAATGATGGTGGTGGAATGTACTCTTCAAGCGGTGGTGGTGATTATATATCTCGTGGCAGTGATGTTGGAGGTAGCTCTTACTCATCAATGTACTATGGCCGTGGTGTGGGTGGAAGCAGTTATATGGGTTCAGGCGGTTCTGGCTCATACTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006417 GO:0007623 GO:0008150 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0016020 GO:0019219 GO:0019222 GO:0030425 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031328 GO:0032268 GO:0032270 GO:0032991 GO:0034248 GO:0034250 GO:0036477 GO:0042995 GO:0043005 GO:0043025 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044297 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044463 GO:0044464 GO:0045727 GO:0045934 GO:0048027 GO:0048511 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051247 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0070937 GO:0071204 GO:0080090 GO:0090365 GO:0090367 GO:0097159 GO:0097447 GO:0097458 GO:0120025 GO:0120038 GO:1901363 GO:1903311 GO:1903312 GO:1990635 GO:1990904 GO:2000112

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

RRM_1

Protein Analysis

831

Amino Acids

92.4

Weight (kDa)

5.32

Isoelectric Point (pI)

54.21

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007307)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44710 AT2G44710 AT2G44710 AT2G44710
fragaria_vesca	FvH4_7g09210
malus_domestica	MD02G1220100.v1.1 MD07G1096800.v1.1
prunus_persica	Prupe.2G120600_v2.0.a1 Prupe.2G120600_v2.0.a1 Prupe.2G120600_v2.0.a1 Prupe.2G120600_v2.0.a1
pyrus_communis	pycom02g18060 pycom07g07990
rosa_chinensis	RchiOBHm_Chr1g0345261
rosa_laevigata	RLG00000028843
rosa_multiflora	Rmu_sc0002329.1_g000009 Rmu_sc0003175.1_g000005 Rmu_sc0011244.1_g000001
rosa_roxburghii	Rroxscaffold_4G00309150
rosa_rugosa	Rorug01G0177000
rosa_samantha	Rh1AG195100 Rh1BG161200 Rh1CG179500 Rh1DG191600
rosa_wichuraiana	Rw1G016070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1327
AccB1I	GGYRCC	1 cut(s)	241
AccII	CGCG	4 cut(s)	1393, 1642, 1644, 1839
AclWI	GGATC	5 cut(s)	273, 1259, 1344, 1888, 1946
AcoI	YGGCCR	3 cut(s)	222, 630, 2434
AcsI	RAATTY	2 cut(s)	63, 1668
AcuI	CTGAAG	4 cut(s)	363, 531, 1181, 1529
AcvI	CACGTG	1 cut(s)	2072
AcyI	GRCGYC	2 cut(s)	1714, 1903
AfaI	GTAC	8 cut(s)	308, 1080, 1913, 1969, 1978, 2186, 2357, 2429
AfiI	CCNNNNNNNGG	9 cut(s)	33, 186, 187, 199, 1742, 1779, 2164, 2169, 2443
AflIII	ACRYGT	2 cut(s)	1463, 1564
AgsI	TTSAA	9 cut(s)	278, 767, 1066, 1376, 1593, 1819, 1895, 2097, 2364
AjiI	CACGTC	1 cut(s)	1574
AjnI	CCWGG	3 cut(s)	370, 1267, 2162
AjuI	GAANNNNNNNTTGG	2 cut(s)	759, 791
Alw21I	GWGCWC	2 cut(s)	726, 2071
Alw26I	GTCTC	3 cut(s)	739, 1497, 1777
Alw44I	GTGCAC	1 cut(s)	2067
AlwI	GGATC	5 cut(s)	273, 1259, 1344, 1888, 1946
AlwNI	CAGNNNCTG	1 cut(s)	1871
Ama87I	CYCGRG	1 cut(s)	665
AoxI	GGCC	9 cut(s)	177, 222, 374, 630, 1229, 1312, 1691, 1748, 2434
ApaLI	GTGCAC	1 cut(s)	2067
ApeKI	GCWGC	4 cut(s)	1454, 1865, 2111, 2259
ApoI	RAATTY	2 cut(s)	63, 1668
AseI	ATTAAT	1 cut(s)	963
Asp700I	GAANNNNTTC	2 cut(s)	651, 2194
AspLEI	GCGC	4 cut(s)	756, 1393, 1644, 1839
AspS9I	GGNCC	6 cut(s)	178, 190, 374, 1770, 1843, 1937
AsuC2I	CCSGG	1 cut(s)	188
AvaI	CYCGRG	1 cut(s)	665
AvaII	GGWCC	4 cut(s)	190, 1770, 1843, 1937
AxyI	CCTNAGG	1 cut(s)	597
BaeGI	GKGCMC	3 cut(s)	2071, 2151, 2170
BanI	GGYRCC	1 cut(s)	241
BauI	CACGAG	1 cut(s)	2388
BbrPI	CACGTG	1 cut(s)	2072
BbsI	GAAGAC	1 cut(s)	1567
Bbv12I	GWGCWC	2 cut(s)	726, 2071
BbvI	GCAGC	4 cut(s)	1441, 1877, 2098, 2271
BccI	CCATC	9 cut(s)	214, 244, 379, 512, 697, 1304, 2159, 2207, 2336
BceAI	ACGGC	2 cut(s)	1299, 2421
BcgI	CGANNNNNNTGC	2 cut(s)	82, 116
BciT130I	CCWGG	3 cut(s)	372, 1269, 2164
BclI	TGATCA	1 cut(s)	364
BcnI	CCSGG	1 cut(s)	188
BcoDI	GTCTC	3 cut(s)	739, 1497, 1777
BfaI	CTAG	3 cut(s)	785, 1493, 2241
BfmI	CTRYAG	3 cut(s)	447, 1455, 2218
BfuAI	ACCTGC	1 cut(s)	1327
BglII	AGATCT	2 cut(s)	1348, 2237
BisI	GCNGC	6 cut(s)	129, 132, 1455, 1866, 2112, 2260
BlsI	GCNGC	6 cut(s)	130, 133, 1456, 1867, 2113, 2261
BmcAI	AGTACT	1 cut(s)	1080
Bme1390I	CCNGG	4 cut(s)	188, 372, 1269, 2164
Bme18I	GGWCC	4 cut(s)	190, 1770, 1843, 1937
BmeT110I	CYCGRG	1 cut(s)	665
BmgBI	CACGTC	1 cut(s)	1574
BmgT120I	GGNCC	6 cut(s)	178, 190, 374, 1770, 1843, 1937
BmiI	GGNNCC	4 cut(s)	139, 191, 204, 243
BmrFI	CCNGG	4 cut(s)	188, 372, 1269, 2164
BmsI	GCATC	6 cut(s)	226, 784, 1162, 1171, 1646, 2041
BoxI	GACNNNNGTC	2 cut(s)	155, 1103
BpiI	GAAGAC	1 cut(s)	1567
BpmI	CTGGAG	2 cut(s)	503, 1746
BpuMI	CCSGG	1 cut(s)	188
Bsa29I	ATCGAT	2 cut(s)	1263, 1585
BsaAI	YACGTR	1 cut(s)	2072
BsaBI	GATNNNNATC	1 cut(s)	1335
BsaHI	GRCGYC	2 cut(s)	1714, 1903
BsaI	GGTCTC	1 cut(s)	1777
BsaJI	CCNNGG	7 cut(s)	107, 371, 633, 1176, 1853, 2163, 2437
BsaWI	WCCGGW	1 cut(s)	313
BsaXI	ACNNNNNCTCC	4 cut(s)	88, 118, 2227, 2257
Bsc4I	CCNNNNNNNGG	9 cut(s)	33, 186, 187, 199, 1742, 1779, 2164, 2169, 2443
Bse1I	ACTGG	5 cut(s)	211, 956, 1680, 1763, 2121
Bse21I	CCTNAGG	1 cut(s)	597
Bse3DI	GCAATG	1 cut(s)	2344
Bse8I	GATNNNNATC	1 cut(s)	1335
BseBI	CCWGG	3 cut(s)	372, 1269, 2164
BseCI	ATCGAT	2 cut(s)	1263, 1585
BseDI	CCNNGG	7 cut(s)	107, 371, 633, 1176, 1853, 2163, 2437
BseJI	GATNNNNATC	1 cut(s)	1335
BseLI	CCNNNNNNNGG	9 cut(s)	33, 186, 187, 199, 1742, 1779, 2164, 2169, 2443
BseMI	GCAATG	1 cut(s)	2344
BseMII	CTCAG	5 cut(s)	489, 588, 837, 884, 1949
BseNI	ACTGG	5 cut(s)	211, 956, 1680, 1763, 2121
BseRI	GAGGAG	8 cut(s)	614, 650, 653, 698, 734, 1749, 2034, 2334
BseSI	GKGCMC	3 cut(s)	2071, 2151, 2170
BseXI	GCAGC	4 cut(s)	1441, 1877, 2098, 2271
BseYI	CCCAGC	1 cut(s)	1633
BsgI	GTGCAG	1 cut(s)	2097
Bsh1236I	CGCG	4 cut(s)	1393, 1642, 1644, 1839
BshFI	GGCC	9 cut(s)	179, 224, 376, 632, 1231, 1314, 1693, 1750, 2436
BshNI	GGYRCC	1 cut(s)	241
BshVI	ATCGAT	2 cut(s)	1263, 1585
BsiHKAI	GWGCWC	2 cut(s)	726, 2071
BsiHKCI	CYCGRG	1 cut(s)	665
BsiSI	CCGG	2 cut(s)	187, 314
BslFI	GGGAC	2 cut(s)	181, 2088
BslI	CCNNNNNNNGG	9 cut(s)	33, 186, 187, 199, 1742, 1779, 2164, 2169, 2443
BsmAI	GTCTC	3 cut(s)	739, 1497, 1777
BsmFI	GGGAC	2 cut(s)	181, 2088
BsmI	GAATGC	2 cut(s)	896, 1051
BsnI	GGCC	9 cut(s)	179, 224, 376, 632, 1231, 1314, 1693, 1750, 2436
Bso31I	GGTCTC	1 cut(s)	1777
BsoBI	CYCGRG	1 cut(s)	665
Bsp1286I	GDGCHC	4 cut(s)	726, 2071, 2151, 2170
Bsp1407I	TGTACA	1 cut(s)	1976
Bsp19I	CCATGG	1 cut(s)	1176
BspANI	GGCC	9 cut(s)	179, 224, 376, 632, 1231, 1314, 1693, 1750, 2436
BspCNI	CTCAG	5 cut(s)	490, 589, 838, 883, 1950
BspDI	ATCGAT	2 cut(s)	1263, 1585
BspFNI	CGCG	4 cut(s)	1393, 1642, 1644, 1839
BspHI	TCATGA	2 cut(s)	655, 1447
BspLI	GGNNCC	4 cut(s)	139, 191, 204, 243
BspMAI	CTGCAG	1 cut(s)	1459
BspMI	ACCTGC	1 cut(s)	1327
BspPI	GGATC	5 cut(s)	273, 1259, 1344, 1888, 1946
BspT107I	GGYRCC	1 cut(s)	241
BspTNI	GGTCTC	1 cut(s)	1777
BsrDI	GCAATG	1 cut(s)	2344
BsrGI	TGTACA	1 cut(s)	1976
BsrI	ACTGG	5 cut(s)	211, 956, 1680, 1763, 2121
BssECI	CCNNGG	7 cut(s)	107, 371, 633, 1176, 1853, 2163, 2437
BssNI	GRCGYC	2 cut(s)	1714, 1903
BssSI	CACGAG	1 cut(s)	2388
BssT1I	CCWWGG	2 cut(s)	1176, 1853
Bst2BI	CACGAG	1 cut(s)	2388
Bst2UI	CCWGG	3 cut(s)	372, 1269, 2164
Bst4CI	ACNGT	8 cut(s)	115, 916, 975, 1001, 1102, 1300, 2057, 2172
Bst6I	CTCTTC	5 cut(s)	113, 273, 669, 711, 2365
BstACI	GRCGYC	2 cut(s)	1714, 1903
BstAUI	TGTACA	1 cut(s)	1976
BstBAI	YACGTR	1 cut(s)	2072
BstC8I	GCNNGC	5 cut(s)	696, 1233, 1389, 1748, 2067
BstDEI	CTNAG	9 cut(s)	498, 597, 812, 846, 870, 876, 1410, 1703, 1958
BstDSI	CCRYGG	2 cut(s)	1176, 2437
BstEII	GGTNACC	1 cut(s)	1628
BstENI	CCTNNNNNAGG	1 cut(s)	1777
BstFNI	CGCG	4 cut(s)	1393, 1642, 1644, 1839
BstHHI	GCGC	4 cut(s)	756, 1393, 1644, 1839
BstMAI	GTCTC	3 cut(s)	739, 1497, 1777
BstMWI	GCNNNNNNNGC	7 cut(s)	137, 803, 932, 1181, 1399, 1699, 2478
BstNI	CCWGG	3 cut(s)	372, 1269, 2164
BstNSI	RCATGY	4 cut(s)	698, 1402, 1467, 1568
BstPAI	GACNNNNGTC	2 cut(s)	155, 1103
BstPI	GGTNACC	1 cut(s)	1628
BstSCI	CCNGG	4 cut(s)	186, 370, 1267, 2162
BstSFI	CTRYAG	3 cut(s)	447, 1455, 2218
BstSLI	GKGCMC	3 cut(s)	2071, 2151, 2170
BstUI	CGCG	4 cut(s)	1393, 1642, 1644, 1839
BstV1I	GCAGC	4 cut(s)	1441, 1877, 2098, 2271
BstV2I	GAAGAC	1 cut(s)	1567
BstX2I	RGATCY	3 cut(s)	265, 1348, 2237
BstXI	CCANNNNNNTGG	1 cut(s)	572
BstYI	RGATCY	3 cut(s)	265, 1348, 2237
Bsu15I	ATCGAT	2 cut(s)	1263, 1585
Bsu36I	CCTNAGG	1 cut(s)	597
BsuRI	GGCC	9 cut(s)	179, 224, 376, 632, 1231, 1314, 1693, 1750, 2436
BsuTUI	ATCGAT	2 cut(s)	1263, 1585
BtgI	CCRYGG	2 cut(s)	1176, 2437
BtgZI	GCGATG	2 cut(s)	233, 1623
BtrI	CACGTC	1 cut(s)	1574
BtsI	GCAGTG	1 cut(s)	2401
BtsIMutI	CAGTG	8 cut(s)	963, 980, 1006, 1107, 1687, 1955, 2114, 2401
BveI	ACCTGC	1 cut(s)	1327
Cac8I	GCNNGC	5 cut(s)	696, 1233, 1389, 1748, 2067
CaiI	CAGNNNCTG	1 cut(s)	1871
CciI	TCATGA	2 cut(s)	655, 1447
CfoI	GCGC	4 cut(s)	756, 1393, 1644, 1839
Cfr13I	GGNCC	6 cut(s)	178, 190, 374, 1770, 1843, 1937
ClaI	ATCGAT	2 cut(s)	1263, 1585
CseI	GACGC	2 cut(s)	1722, 1911
Csp6I	GTAC	8 cut(s)	307, 1079, 1912, 1968, 1977, 2185, 2356, 2428
CspCI	CAANNNNNGTGG	2 cut(s)	2326, 2361
CviQI	GTAC	8 cut(s)	307, 1079, 1912, 1968, 1977, 2185, 2356, 2428
DdeI	CTNAG	9 cut(s)	498, 597, 812, 846, 870, 876, 1410, 1703, 1958
EaeI	YGGCCR	3 cut(s)	222, 630, 2434
Eam1104I	CTCTTC	5 cut(s)	113, 273, 669, 711, 2365
EarI	CTCTTC	5 cut(s)	113, 273, 669, 711, 2365
Eco130I	CCWWGG	2 cut(s)	1176, 1853
Eco147I	AGGCCT	3 cut(s)	1231, 1693, 1750
Eco31I	GGTCTC	1 cut(s)	1777
Eco32I	GATATC	1 cut(s)	1210
Eco47I	GGWCC	4 cut(s)	190, 1770, 1843, 1937
Eco57I	CTGAAG	4 cut(s)	363, 531, 1181, 1529
Eco72I	CACGTG	1 cut(s)	2072
Eco81I	CCTNAGG	1 cut(s)	597
Eco88I	CYCGRG	1 cut(s)	665
Eco91I	GGTNACC	1 cut(s)	1628
EcoNI	CCTNNNNNAGG	1 cut(s)	1777
EcoO109I	RGGNCCY	3 cut(s)	374, 1770, 1843
EcoO65I	GGTNACC	1 cut(s)	1628
EcoRI	GAATTC	1 cut(s)	1668
EcoRII	CCWGG	3 cut(s)	370, 1267, 2162
EcoRV	GATATC	1 cut(s)	1210
EcoT14I	CCWWGG	2 cut(s)	1176, 1853
ErhI	CCWWGG	2 cut(s)	1176, 1853
FalI	AAGNNNNNCTT	6 cut(s)	1799, 1831, 1957, 1989, 1978, 2010
FaqI	GGGAC	2 cut(s)	181, 2088
FauI	CCCGC	3 cut(s)	35, 127, 1637
FauNDI	CATATG	1 cut(s)	1025
FbaI	TGATCA	1 cut(s)	364
Fnu4HI	GCNGC	6 cut(s)	129, 132, 1455, 1866, 2112, 2260
Fsp4HI	GCNGC	6 cut(s)	129, 132, 1455, 1866, 2112, 2260
FspBI	CTAG	3 cut(s)	785, 1493, 2241
GlaI	GCGC	4 cut(s)	755, 1392, 1643, 1838
GluI	GCNGC	6 cut(s)	129, 132, 1455, 1866, 2112, 2260
GsaI	CCCAGC	1 cut(s)	1637
GsuI	CTGGAG	2 cut(s)	503, 1746
HaeIII	GGCC	9 cut(s)	179, 224, 376, 632, 1231, 1314, 1693, 1750, 2436
HapII	CCGG	2 cut(s)	187, 314
HgaI	GACGC	2 cut(s)	1722, 1911
HhaI	GCGC	4 cut(s)	756, 1393, 1644, 1839
Hin1I	GRCGYC	2 cut(s)	1714, 1903
Hin6I	GCGC	4 cut(s)	754, 1391, 1642, 1837
HinP1I	GCGC	4 cut(s)	754, 1391, 1642, 1837
HincII	GTYRAC	1 cut(s)	709
HindII	GTYRAC	1 cut(s)	709
HindIII	AAGCTT	2 cut(s)	351, 819
HinfI	GANTC	8 cut(s)	11, 156, 443, 1132, 1253, 2081, 2276, 2324
HpaII	CCGG	2 cut(s)	187, 314
Hpy166II	GTNNAC	2 cut(s)	709, 2069
Hpy188I	TCNGA	9 cut(s)	108, 382, 873, 1171, 1200, 1346, 1548, 1873, 1951
Hpy188III	TCNNGA	9 cut(s)	206, 656, 785, 995, 1448, 1536, 1819, 1895, 2273
Hpy8I	GTNNAC	2 cut(s)	709, 2069
HpyCH4III	ACNGT	8 cut(s)	115, 916, 975, 1001, 1102, 1300, 2057, 2172
HpyCH4IV	ACGT	3 cut(s)	1573, 2071, 2101
HpyF10VI	GCNNNNNNNGC	7 cut(s)	137, 803, 932, 1181, 1399, 1699, 2478
HpyF3I	CTNAG	9 cut(s)	498, 597, 812, 846, 870, 876, 1410, 1703, 1958
HpySE526I	ACGT	3 cut(s)	1573, 2071, 2101
Hsp92I	GRCGYC	2 cut(s)	1714, 1903
HspAI	GCGC	4 cut(s)	754, 1391, 1642, 1837
Ksp22I	TGATCA	1 cut(s)	364
LmnI	GCTCC	5 cut(s)	137, 208, 550, 685, 721
Lsp1109I	GCAGC	4 cut(s)	1441, 1877, 2098, 2271
LweI	GCATC	6 cut(s)	226, 784, 1162, 1171, 1646, 2041
MaeI	CTAG	3 cut(s)	785, 1493, 2241
MaeII	ACGT	3 cut(s)	1573, 2071, 2101
MfeI	CAATTG	1 cut(s)	297
MflI	RGATCY	3 cut(s)	265, 1348, 2237
MhlI	GDGCHC	4 cut(s)	726, 2071, 2151, 2170
MluCI	AATT	4 cut(s)	63, 82, 297, 1668
MlyI	GAGTC	3 cut(s)	165, 452, 2075
MmeI	TCCRAC	5 cut(s)	624, 1549, 1582, 1639, 2383
MroXI	GAANNNNTTC	2 cut(s)	651, 2194
MslI	CAYNNNNRTG	1 cut(s)	693
MspI	CCGG	2 cut(s)	187, 314
MspR9I	CCNGG	4 cut(s)	188, 372, 1269, 2164
MunI	CAATTG	1 cut(s)	297
Mva1269I	GAATGC	2 cut(s)	896, 1051
MvaI	CCWGG	3 cut(s)	372, 1269, 2164
MvnI	CGCG	4 cut(s)	1393, 1642, 1644, 1839
MwoI	GCNNNNNNNGC	7 cut(s)	137, 803, 932, 1181, 1399, 1699, 2478
NciI	CCSGG	1 cut(s)	188
NcoI	CCATGG	1 cut(s)	1176
NdeI	CATATG	1 cut(s)	1025
NlaIV	GGNNCC	4 cut(s)	139, 191, 204, 243
NmeAIII	GCCGAG	1 cut(s)	658
NmuCI	GTSAC	4 cut(s)	157, 623, 1628, 2222
NspI	RCATGY	4 cut(s)	698, 1402, 1467, 1568
PaeI	GCATGC	1 cut(s)	698
PaeR7I	CTCGAG	1 cut(s)	665
PagI	TCATGA	2 cut(s)	655, 1447
PceI	AGGCCT	3 cut(s)	1231, 1693, 1750
PciI	ACATGT	2 cut(s)	1463, 1564
PctI	GAATGC	2 cut(s)	896, 1051
PdmI	GAANNNNTTC	2 cut(s)	651, 2194
PfeI	GAWTC	5 cut(s)	11, 1132, 1253, 2276, 2324
PkrI	GCNGC	6 cut(s)	130, 133, 1456, 1867, 2113, 2261
PleI	GAGTC	3 cut(s)	164, 451, 2075
PmaCI	CACGTG	1 cut(s)	2072
PmlI	CACGTG	1 cut(s)	2072
PpsI	GAGTC	3 cut(s)	164, 451, 2075
Ppu21I	YACGTR	1 cut(s)	2072
PpuMI	RGGWCCY	2 cut(s)	1770, 1843
PscI	ACATGT	2 cut(s)	1463, 1564
PshAI	GACNNNNGTC	2 cut(s)	155, 1103
PshBI	ATTAAT	1 cut(s)	963
Psp5II	RGGWCCY	2 cut(s)	1770, 1843
Psp6I	CCWGG	3 cut(s)	370, 1267, 2162
PspCI	CACGTG	1 cut(s)	2072
PspEI	GGTNACC	1 cut(s)	1628
PspFI	CCCAGC	1 cut(s)	1633
PspGI	CCWGG	3 cut(s)	370, 1267, 2162
PspN4I	GGNNCC	4 cut(s)	139, 191, 204, 243
PspPI	GGNCC	6 cut(s)	178, 190, 374, 1770, 1843, 1937
PspPPI	RGGWCCY	2 cut(s)	1770, 1843
PspXI	VCTCGAGB	1 cut(s)	665
PstI	CTGCAG	1 cut(s)	1459
PstNI	CAGNNNCTG	1 cut(s)	1871
PsuI	RGATCY	3 cut(s)	265, 1348, 2237
RsaI	GTAC	8 cut(s)	308, 1080, 1913, 1969, 1978, 2186, 2357, 2429
RsaNI	GTAC	8 cut(s)	307, 1079, 1912, 1968, 1977, 2185, 2356, 2428
RseI	CAYNNNNRTG	1 cut(s)	693
SatI	GCNGC	6 cut(s)	129, 132, 1455, 1866, 2112, 2260
Sau96I	GGNCC	6 cut(s)	178, 190, 374, 1770, 1843, 1937
ScaI	AGTACT	1 cut(s)	1080
SchI	GAGTC	3 cut(s)	165, 452, 2075
ScrFI	CCNGG	4 cut(s)	188, 372, 1269, 2164
SduI	GDGCHC	4 cut(s)	726, 2071, 2151, 2170
SfaNI	GCATC	6 cut(s)	226, 784, 1162, 1171, 1646, 2041
SfcI	CTRYAG	3 cut(s)	447, 1455, 2218
Sfr274I	CTCGAG	1 cut(s)	665
SinI	GGWCC	4 cut(s)	190, 1770, 1843, 1937
SlaI	CTCGAG	1 cut(s)	665
SmiMI	CAYNNNNRTG	1 cut(s)	693
SmlI	CTYRAG	1 cut(s)	665
SmoI	CTYRAG	1 cut(s)	665
SphI	GCATGC	1 cut(s)	698
Sse9I	AATT	4 cut(s)	63, 82, 297, 1668
SseBI	AGGCCT	3 cut(s)	1231, 1693, 1750
SspMI	CTAG	3 cut(s)	785, 1493, 2241
StuI	AGGCCT	3 cut(s)	1231, 1693, 1750
StyD4I	CCNGG	4 cut(s)	186, 370, 1267, 2162
StyI	CCWWGG	2 cut(s)	1176, 1853
TaaI	ACNGT	8 cut(s)	115, 916, 975, 1001, 1102, 1300, 2057, 2172
TaiI	ACGT	3 cut(s)	1576, 2074, 2104
TaqI	TCGA	8 cut(s)	17, 86, 231, 666, 1107, 1263, 1585, 1666
TasI	AATT	4 cut(s)	63, 82, 297, 1668
TatI	WGTACW	4 cut(s)	1078, 1976, 2355, 2427
TauI	GCSGC	2 cut(s)	131, 134
TfiI	GAWTC	5 cut(s)	11, 1132, 1253, 2276, 2324
TscAI	CASTG	8 cut(s)	963, 980, 1006, 1107, 1687, 1962, 2121, 2401
TseFI	GTSAC	4 cut(s)	157, 623, 1628, 2222
TseI	GCWGC	4 cut(s)	1454, 1865, 2111, 2259
Tsp45I	GTSAC	4 cut(s)	157, 623, 1628, 2222
TspGWI	ACGGA	3 cut(s)	346, 429, 2202
TspRI	CASTG	8 cut(s)	963, 980, 1006, 1107, 1687, 1962, 2121, 2401
VneI	GTGCAC	1 cut(s)	2067
VpaK11BI	GGWCC	4 cut(s)	190, 1770, 1843, 1937
VspI	ATTAAT	1 cut(s)	963
XagI	CCTNNNNNAGG	1 cut(s)	1777
XapI	RAATTY	2 cut(s)	63, 1668
XbaI	TCTAGA	1 cut(s)	784
XceI	RCATGY	4 cut(s)	698, 1402, 1467, 1568
XhoI	CTCGAG	1 cut(s)	665
XmnI	GAANNNNTTC	2 cut(s)	651, 2194
XspI	CTAG	3 cut(s)	785, 1493, 2241
ZrmI	AGTACT	1 cut(s)	1080

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.