Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0007307

Physical Location & Seq

Genomic Coordinates Forward (+)

10629598 .. 10636074

Gene Structure 6477 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1096800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2427 bp

ATGCCTCCGAGGACGGTGAAGAGAGGTGGGGCGGCGGGAGCGAAGAGGACGACGAGAGTCACCAGGGGGACGCACAAGGCCCAGAACCAGGTCCAGCCTGAGGCTCCAGATGAGTTGGTGAAGGCCGAGGATGCGGTGCCGATGGTGGAATCTAAAGAGGATCTCAATGTTGAAGAGATTAAGGAGAAGCCAATTGCGGCGGACAAGCTCGTGGCTGTCGAGGAGAAGCCAGTTGTTGATGAAAAGGCATCCGTTATTGATCAGTCAGGGCCTTCAGAGATGGAAGTTGAAGCGAAAGCAGAGCAGAAAGGATTAAAAAAACAAGATAAGGTTAAGGAGTCTATAGATGATTATGAAAAAGATGAACAATTAGAGCTGGAGGATAATGAAGCTGAGTATGAACCTGAAGAAGATGGTGGGGTTGATTATGATGAGAAGGAAATGGAACAAGAGGATATCCAGGAGCTCGGGGATGAAGGAGATGAAGAACCTGAGGAGATTGTAGGTGAAGAAGAAGGTGATATGGCTGAGGAAGAGTTGGAAGATGGCCACGAAGAACTCGAGGGTGAAGAGTTTGAGGAGCATGCTAGCGAGGAGCATGAGCATGAGCATGCAGAGATGGTTGACGAGGAAGAGGAGCACCATGAAGTTGTAAAGGAGAGACGGAAGCGCAAGGAGTTTGAAGTATTTGTTGGTGGTCTAGACAAGGATGCAAGTGAGGCTGATCTTAGGAAAGCTTTTGCTGGTGTTGGTGAAGTTACTGAGGTCAGGCTGATGATGAACCCTCAGACTAAGAAGAACAAGGGATTTGCGTTCTTGCGTTTTGCAACTGTGGAACAAGCAAGGCGAGCAGTTGCGGAGCTTAAACATCCAGTGATTAATGGAAAACAGTGTGGTGTTACTCCAAGTCAAGACAGTGATACTCTTTTTCTGGGTAACATATGCAAGACATGGACAAAGGATGCTTTGAGAGAGAAGTTGAAACATTATGGAGTAGATAATGTTGAGGGTCTGACATTGGTTGAAGATACTAACTATGAGGGAATGAATCGAGGCTTTGCTTTTTTGGAATTTTCTTCTCGTTCAGATGCCATGGATGCTTTTAAGCGACTTCAAAAAAGAGATATTGTGTTTGGAGTTGATAGGCCTGCAAAAGTTTCTTTTGCAGATTCCTTCATTGATCCTGGTGATGAAATCATGGCACAGGTCAAAACTGTGTTTGTTGATGGCCTACCTGCTTCATGGGATGAGGACCATGTCCAAGATCTTCTTAAGGAATATGGGAATGTTGAAAAGATTGAGCTTGCGCGGAACATGCCCTCTGCTAAGAGGAGAGATTTTGGTTTTGTTACATTCGACACTCATGAGGCTGCAGTTACGTGTGCTAAAAGCATTAACAATTCAGAGTTAGGTGAAGGAGACAACAAGGCGAAAGTCAGGGCGAGGTTATCAAGACCGCTCCAGAGGGGTAAAGGAAAACATGTTGGGCGAGGAGATTATCGATCTTCTAGGGGGGTTGGACGAGTTGTTAGAGGTTCATGGGGTCACCCAGCACCACGCCCTCTCCCTCCTATGCGTAGTGGGTTAAGGGGAGTTGGAAGTCGAATCCCACCAGCCAGTGTAAAGAGGCCTGTTGCGCTAAGAGATAGACGCCATGTGATGTCATCTTATCCACAAAGAGGCAGGCCTTTGCCTCCTCCATCTAGGTCCTATGACAGGAGGCCACCTGTTCCTGCGTACCCAAAGAGTAGCTTCAGGAGGGAATATAGCAGGCATGAGGACCTTCCTCCTCCAAGGAGTAGAGCAGCCCCTGATTATGGATCAAGGGCTGTTCCAGAAAGACGCCAATCGTACAGAGATGATTACGCTCAGCGTGGTCCTGCCTACTCTGATCCACCAAGAAGTACATCTCGTACAACAGGAAGGAGAGCTTATGTTGATGAAGGTTACGGACAGCGGTATGAAAGGCATCCTCCCCCTCCTCCTCCTCCAAGTTACCGTGAAGGTCGTGCTCGTGATTATGACACTATTTCTGGTTCAAAACGTGCCTACTCTGCACTGGATGATGTTCCTCCCCGTTATGCTGATGCGGGCATCCGCCAATCAAGGGCACGGTTAGACTATGAGTATGAAAGTGGTTCGTCTCAATATGGTGATGGCTATAGTGACAGACTTGGGAGATCTAATATGGGATATGGAAGCAGCAGAACAAGTCAGGATTCTCATGGACTATACAGCAGTCGTCAGGGCATGGGCTATGGAGGAGGTTCTTATGGTGGTAGTGACGTTGGTGGAATGTACTCATCCAGCTATGGTGGTGATTATATCTCTCGTGGCAGTGACGTTGGAGGTAGCTCTTACTCATCAATGTACTCTGGCCGTGGTGCGGGTGGAAGCAGTTATATGGGTTCAGGTGATCTGACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006417 GO:0007623 GO:0008150 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0016020 GO:0019219 GO:0019222 GO:0030425 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031328 GO:0032268 GO:0032270 GO:0032991 GO:0034248 GO:0034250 GO:0036477 GO:0042995 GO:0043005 GO:0043025 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044297 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044463 GO:0044464 GO:0045727 GO:0045934 GO:0048027 GO:0048511 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051247 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0070937 GO:0071204 GO:0080090 GO:0090365 GO:0090367 GO:0097159 GO:0097447 GO:0097458 GO:0120025 GO:0120038 GO:1901363 GO:1903311 GO:1903312 GO:1990635 GO:1990904 GO:2000112

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

RRM_1

Protein Analysis

809

Amino Acids

90.06

Weight (kDa)

5.25

Isoelectric Point (pI)

56.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	229 - 297	1.2e-17	RNA recognition motif
RRM_1	PF00076	309 - 375	2.3e-07	RNA recognition motif
RRM_1	PF00076	406 - 471	2.9e-11	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007307)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44710 AT2G44710 AT2G44710 AT2G44710
fragaria_vesca	FvH4_7g09210
malus_domestica	MD02G1220100.v1.1 MD07G1096800.v1.1
prunus_persica	Prupe.2G120600_v2.0.a1 Prupe.2G120600_v2.0.a1 Prupe.2G120600_v2.0.a1 Prupe.2G120600_v2.0.a1
pyrus_communis	pycom02g18060 pycom07g07990
rosa_chinensis	RchiOBHm_Chr1g0345261
rosa_laevigata	RLG00000028843
rosa_multiflora	Rmu_sc0002329.1_g000009 Rmu_sc0003175.1_g000005 Rmu_sc0011244.1_g000001
rosa_roxburghii	Rroxscaffold_4G00309150
rosa_rugosa	Rorug01G0177000
rosa_samantha	Rh1AG195100 Rh1BG161200 Rh1CG179500 Rh1DG191600
rosa_wichuraiana	Rw1G016070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1243
AccB1I	GGYRCC	1 cut(s)	136
AccBSI	CCGCTC	1 cut(s)	1459
AccII	CGCG	1 cut(s)	1309
AclWI	GGATC	4 cut(s)	168, 1175, 1828, 1886
AcoI	YGGCCR	2 cut(s)	547, 2377
AcsI	RAATTY	1 cut(s)	1070
AcuI	CTGAAG	3 cut(s)	258, 426, 1738
AcyI	GRCGYC	2 cut(s)	1651, 1843
AfaI	GTAC	6 cut(s)	1739, 1853, 1906, 1915, 2300, 2372
AfiI	CCNNNNNNNGG	7 cut(s)	88, 100, 1679, 1716, 1817, 2107, 2386
AflII	CTTAAG	1 cut(s)	1271
AflIII	ACRYGT	2 cut(s)	1379, 1480
AgsI	TTSAA	8 cut(s)	173, 290, 683, 982, 1025, 1115, 1292, 2040
AjnI	CCWGG	4 cut(s)	62, 87, 459, 1183
AjuI	GAANNNNNNNTTGG	2 cut(s)	675, 707
Alw21I	GWGCWC	3 cut(s)	468, 642, 2014
Alw26I	GTCTC	3 cut(s)	655, 1413, 2148
AlwI	GGATC	4 cut(s)	168, 1175, 1828, 1886
AlwNI	CAGNNNCTG	1 cut(s)	1811
Ama87I	CYCGRG	2 cut(s)	467, 560
ApeKI	GCWGC	3 cut(s)	1370, 1805, 2202
ApoI	RAATTY	1 cut(s)	1070
AseI	ATTAAT	1 cut(s)	879
AspLEI	GCGC	3 cut(s)	672, 1309, 1639
AspS9I	GGNCC	7 cut(s)	79, 91, 269, 1252, 1707, 1780, 1877
AsuNHI	GCTAGC	1 cut(s)	587
AvaI	CYCGRG	2 cut(s)	467, 560
AvaII	GGWCC	5 cut(s)	91, 1252, 1707, 1780, 1877
AxyI	CCTNAGG	2 cut(s)	99, 492
BaeGI	GKGCMC	1 cut(s)	2113
BalI	TGGCCA	1 cut(s)	549
BanI	GGYRCC	1 cut(s)	136
BanII	GRGCYC	1 cut(s)	468
BauI	CACGAG	3 cut(s)	209, 2013, 2331
Bbv12I	GWGCWC	3 cut(s)	468, 642, 2014
BbvCI	CCTCAGC	1 cut(s)	528
BbvI	GCAGC	3 cut(s)	1357, 1817, 2214
BccI	CCATC	8 cut(s)	136, 274, 407, 539, 613, 1220, 1708, 2150
BceAI	ACGGC	1 cut(s)	2364
BciT130I	CCWGG	4 cut(s)	64, 89, 461, 1185
BclI	TGATCA	1 cut(s)	259
BcoDI	GTCTC	3 cut(s)	655, 1413, 2148
BfaI	CTAG	4 cut(s)	588, 701, 1509, 1704
BfmI	CTRYAG	3 cut(s)	342, 1371, 2161
BfrI	CTTAAG	1 cut(s)	1271
BfuAI	ACCTGC	1 cut(s)	1243
BglII	AGATCT	2 cut(s)	1264, 2180
BisI	GCNGC	5 cut(s)	33, 198, 1371, 1806, 2203
BlpI	GCTNAGC	1 cut(s)	1869
BlsI	GCNGC	5 cut(s)	34, 199, 1372, 1807, 2204
Bme1390I	CCNGG	4 cut(s)	64, 89, 461, 1185
Bme18I	GGWCC	5 cut(s)	91, 1252, 1707, 1780, 1877
BmeT110I	CYCGRG	2 cut(s)	467, 560
BmgT120I	GGNCC	7 cut(s)	79, 91, 269, 1252, 1707, 1780, 1877
BmiI	GGNNCC	2 cut(s)	105, 138
BmrFI	CCNGG	4 cut(s)	64, 89, 461, 1185
BmsI	GCATC	9 cut(s)	121, 257, 700, 952, 1078, 1087, 1978, 2077, 2103
BmtI	GCTAGC	1 cut(s)	591
BoxI	GACNNNNGTC	1 cut(s)	56
BpmI	CTGGAG	3 cut(s)	90, 398, 1445
Bpu10I	CCTNAGC	1 cut(s)	528
Bpu1102I	GCTNAGC	1 cut(s)	1869
Bsa29I	ATCGAT	1 cut(s)	1501
BsaAI	YACGTR	1 cut(s)	1380
BsaHI	GRCGYC	2 cut(s)	1651, 1843
BsaJI	CCNNGG	6 cut(s)	8, 63, 126, 1092, 1793, 2380
BsaXI	ACNNNNNCTCC	2 cut(s)	1548, 1578
Bsc4I	CCNNNNNNNGG	7 cut(s)	88, 100, 1679, 1716, 1817, 2107, 2386
Bse1I	ACTGG	4 cut(s)	230, 872, 1617, 2064
Bse21I	CCTNAGG	2 cut(s)	99, 492
BseBI	CCWGG	4 cut(s)	64, 89, 461, 1185
BseCI	ATCGAT	1 cut(s)	1501
BseDI	CCNNGG	6 cut(s)	8, 63, 126, 1092, 1793, 2380
BseLI	CCNNNNNNNGG	7 cut(s)	88, 100, 1679, 1716, 1817, 2107, 2386
BseMII	CTCAG	7 cut(s)	90, 384, 483, 519, 753, 800, 1883
BseNI	ACTGG	4 cut(s)	230, 872, 1617, 2064
BseSI	GKGCMC	1 cut(s)	2113
BseXI	GCAGC	3 cut(s)	1357, 1817, 2214
BseYI	CCCAGC	1 cut(s)	1549
BsgI	GTGCAG	1 cut(s)	2040
Bsh1236I	CGCG	1 cut(s)	1309
BshNI	GGYRCC	1 cut(s)	136
BshVI	ATCGAT	1 cut(s)	1501
BsiHKAI	GWGCWC	3 cut(s)	468, 642, 2014
BsiHKCI	CYCGRG	2 cut(s)	467, 560
BslFI	GGGAC	1 cut(s)	82
BslI	CCNNNNNNNGG	7 cut(s)	88, 100, 1679, 1716, 1817, 2107, 2386
BsmAI	GTCTC	3 cut(s)	655, 1413, 2148
BsmBI	CGTCTC	2 cut(s)	655, 2148
BsmFI	GGGAC	1 cut(s)	82
BsoBI	CYCGRG	2 cut(s)	467, 560
Bsp1286I	GDGCHC	4 cut(s)	468, 642, 2014, 2113
Bsp1720I	GCTNAGC	1 cut(s)	1869
Bsp19I	CCATGG	1 cut(s)	1092
BspCNI	CTCAG	7 cut(s)	91, 385, 484, 520, 754, 799, 1882
BspDI	ATCGAT	1 cut(s)	1501
BspFNI	CGCG	1 cut(s)	1309
BspHI	TCATGA	1 cut(s)	1363
BspLI	GGNNCC	2 cut(s)	105, 138
BspMAI	CTGCAG	1 cut(s)	1375
BspMI	ACCTGC	1 cut(s)	1243
BspOI	GCTAGC	1 cut(s)	591
BspPI	GGATC	4 cut(s)	168, 1175, 1828, 1886
BspT107I	GGYRCC	1 cut(s)	136
BspTI	CTTAAG	1 cut(s)	1271
BsrBI	CCGCTC	1 cut(s)	1459
BsrI	ACTGG	4 cut(s)	230, 872, 1617, 2064
BssECI	CCNNGG	6 cut(s)	8, 63, 126, 1092, 1793, 2380
BssNI	GRCGYC	2 cut(s)	1651, 1843
BssSI	CACGAG	3 cut(s)	209, 2013, 2331
BssT1I	CCWWGG	2 cut(s)	1092, 1793
Bst2BI	CACGAG	3 cut(s)	209, 2013, 2331
Bst2UI	CCWGG	4 cut(s)	64, 89, 461, 1185
Bst4CI	ACNGT	7 cut(s)	16, 832, 891, 917, 1216, 2000, 2115
Bst6I	CTCTTC	6 cut(s)	14, 38, 168, 528, 564, 627
BstACI	GRCGYC	2 cut(s)	1651, 1843
BstAFI	CTTAAG	1 cut(s)	1271
BstBAI	YACGTR	1 cut(s)	1380
BstC8I	GCNNGC	9 cut(s)	585, 589, 612, 849, 1149, 1305, 1685, 1772, 2092
BstDSI	CCRYGG	2 cut(s)	1092, 2380
BstEII	GGTNACC	1 cut(s)	1544
BstENI	CCTNNNNNAGG	1 cut(s)	1714
BstFNI	CGCG	1 cut(s)	1309
BstHHI	GCGC	3 cut(s)	672, 1309, 1639
BstMAI	GTCTC	3 cut(s)	655, 1413, 2148
BstMWI	GCNNNNNNNGC	8 cut(s)	38, 131, 719, 848, 1097, 1315, 1636, 2054
BstNI	CCWGG	4 cut(s)	64, 89, 461, 1185
BstNSI	RCATGY	4 cut(s)	587, 614, 1318, 1484
BstPAI	GACNNNNGTC	1 cut(s)	56
BstPI	GGTNACC	1 cut(s)	1544
BstSCI	CCNGG	4 cut(s)	62, 87, 459, 1183
BstSFI	CTRYAG	3 cut(s)	342, 1371, 2161
BstSLI	GKGCMC	1 cut(s)	2113
BstUI	CGCG	1 cut(s)	1309
BstV1I	GCAGC	3 cut(s)	1357, 1817, 2214
BstX2I	RGATCY	3 cut(s)	160, 1264, 2180
BstYI	RGATCY	3 cut(s)	160, 1264, 2180
Bsu15I	ATCGAT	1 cut(s)	1501
Bsu36I	CCTNAGG	2 cut(s)	99, 492
BsuTUI	ATCGAT	1 cut(s)	1501
BtgI	CCRYGG	2 cut(s)	1092, 2380
BtsI	GCAGTG	1 cut(s)	2344
BtsIMutI	CAGTG	6 cut(s)	879, 896, 922, 1624, 2057, 2344
BveI	ACCTGC	1 cut(s)	1243
Cac8I	GCNNGC	9 cut(s)	585, 589, 612, 849, 1149, 1305, 1685, 1772, 2092
CaiI	CAGNNNCTG	1 cut(s)	1811
CciI	TCATGA	1 cut(s)	1363
CfoI	GCGC	3 cut(s)	672, 1309, 1639
Cfr13I	GGNCC	7 cut(s)	79, 91, 269, 1252, 1707, 1780, 1877
ClaI	ATCGAT	1 cut(s)	1501
CseI	GACGC	3 cut(s)	79, 1659, 1851
CsiI	ACCWGGT	1 cut(s)	87
Csp6I	GTAC	6 cut(s)	1738, 1852, 1905, 1914, 2299, 2371
CviQI	GTAC	6 cut(s)	1738, 1852, 1905, 1914, 2299, 2371
EaeI	YGGCCR	2 cut(s)	547, 2377
Eam1104I	CTCTTC	6 cut(s)	14, 38, 168, 528, 564, 627
EarI	CTCTTC	6 cut(s)	14, 38, 168, 528, 564, 627
EciI	GGCGGA	2 cut(s)	215, 2087
Ecl136II	GAGCTC	1 cut(s)	466
Eco130I	CCWWGG	2 cut(s)	1092, 1793
Eco147I	AGGCCT	3 cut(s)	1147, 1630, 1687
Eco24I	GRGCYC	1 cut(s)	468
Eco32I	GATATC	1 cut(s)	457
Eco47I	GGWCC	5 cut(s)	91, 1252, 1707, 1780, 1877
Eco53kI	GAGCTC	1 cut(s)	466
Eco57I	CTGAAG	3 cut(s)	258, 426, 1738
Eco81I	CCTNAGG	2 cut(s)	99, 492
Eco88I	CYCGRG	2 cut(s)	467, 560
Eco91I	GGTNACC	1 cut(s)	1544
EcoICRI	GAGCTC	1 cut(s)	466
EcoNI	CCTNNNNNAGG	1 cut(s)	1714
EcoO109I	RGGNCCY	3 cut(s)	269, 1707, 1780
EcoO65I	GGTNACC	1 cut(s)	1544
EcoRII	CCWGG	4 cut(s)	62, 87, 459, 1183
EcoRV	GATATC	1 cut(s)	457
EcoT14I	CCWWGG	2 cut(s)	1092, 1793
EcoT38I	GRGCYC	1 cut(s)	468
ErhI	CCWWGG	2 cut(s)	1092, 1793
Esp3I	CGTCTC	2 cut(s)	655, 2148
FalI	AAGNNNNNCTT	6 cut(s)	1254, 1286, 1736, 1768, 1915, 1947
FaqI	GGGAC	1 cut(s)	82
FauI	CCCGC	3 cut(s)	28, 2083, 2380
FauNDI	CATATG	1 cut(s)	941
FbaI	TGATCA	1 cut(s)	259
Fnu4HI	GCNGC	5 cut(s)	33, 198, 1371, 1806, 2203
FriOI	GRGCYC	1 cut(s)	468
Fsp4HI	GCNGC	5 cut(s)	33, 198, 1371, 1806, 2203
FspBI	CTAG	4 cut(s)	588, 701, 1509, 1704
GlaI	GCGC	3 cut(s)	671, 1308, 1638
GluI	GCNGC	5 cut(s)	33, 198, 1371, 1806, 2203
GsaI	CCCAGC	1 cut(s)	1553
GsuI	CTGGAG	3 cut(s)	90, 398, 1445
HgaI	GACGC	3 cut(s)	79, 1659, 1851
HhaI	GCGC	3 cut(s)	672, 1309, 1639
Hin1I	GRCGYC	2 cut(s)	1651, 1843
Hin6I	GCGC	3 cut(s)	670, 1307, 1637
HinP1I	GCGC	3 cut(s)	670, 1307, 1637
HincII	GTYRAC	1 cut(s)	625
HindII	GTYRAC	1 cut(s)	625
HindIII	AAGCTT	1 cut(s)	735
HinfI	GANTC	7 cut(s)	57, 149, 338, 1048, 1169, 1605, 2219
Hpy166II	GTNNAC	1 cut(s)	625
Hpy188I	TCNGA	8 cut(s)	9, 277, 789, 1014, 1087, 1405, 1891, 2421
Hpy8I	GTNNAC	1 cut(s)	625
Hpy99I	CGWCG	1 cut(s)	55
HpyCH4III	ACNGT	7 cut(s)	16, 832, 891, 917, 1216, 2000, 2115
HpyCH4IV	ACGT	4 cut(s)	1379, 2044, 2286, 2343
HpyCH4V	TGCA	8 cut(s)	614, 713, 827, 945, 1151, 1166, 1373, 2057
HpyF10VI	GCNNNNNNNGC	8 cut(s)	38, 131, 719, 848, 1097, 1315, 1636, 2054
HpySE526I	ACGT	4 cut(s)	1379, 2044, 2286, 2343
Hsp92I	GRCGYC	2 cut(s)	1651, 1843
HspAI	GCGC	3 cut(s)	670, 1307, 1637
Ksp22I	TGATCA	1 cut(s)	259
LmnI	GCTCC	8 cut(s)	38, 109, 463, 580, 595, 637, 859, 1464
Lsp1109I	GCAGC	3 cut(s)	1357, 1817, 2214
LweI	GCATC	9 cut(s)	121, 257, 700, 952, 1078, 1087, 1978, 2077, 2103
MabI	ACCWGGT	1 cut(s)	87
MaeI	CTAG	4 cut(s)	588, 701, 1509, 1704
MaeII	ACGT	4 cut(s)	1379, 2044, 2286, 2343
MbiI	CCGCTC	1 cut(s)	1459
MfeI	CAATTG	1 cut(s)	192
MflI	RGATCY	3 cut(s)	160, 1264, 2180
MhlI	GDGCHC	4 cut(s)	468, 642, 2014, 2113
MlsI	TGGCCA	1 cut(s)	549
MluCI	AATT	4 cut(s)	192, 368, 1070, 1399
MluNI	TGGCCA	1 cut(s)	549
MlyI	GAGTC	2 cut(s)	66, 347
MmeI	TCCRAC	4 cut(s)	519, 1498, 1576, 2326
Mox20I	TGGCCA	1 cut(s)	549
MscI	TGGCCA	1 cut(s)	549
MseI	TTAA	9 cut(s)	180, 314, 333, 864, 879, 1104, 1272, 1395, 1586
MslI	CAYNNNNRTG	2 cut(s)	603, 609
Msp20I	TGGCCA	1 cut(s)	549
MspA1I	CMGCKG	1 cut(s)	1957
MspCI	CTTAAG	1 cut(s)	1271
MspR9I	CCNGG	4 cut(s)	64, 89, 461, 1185
MunI	CAATTG	1 cut(s)	192
MvaI	CCWGG	4 cut(s)	64, 89, 461, 1185
MvnI	CGCG	1 cut(s)	1309
MwoI	GCNNNNNNNGC	8 cut(s)	38, 131, 719, 848, 1097, 1315, 1636, 2054
NcoI	CCATGG	1 cut(s)	1092
NdeI	CATATG	1 cut(s)	941
NheI	GCTAGC	1 cut(s)	587
NlaIV	GGNNCC	2 cut(s)	105, 138
NmeAIII	GCCGAG	1 cut(s)	151
NmuCI	GTSAC	5 cut(s)	58, 1544, 2165, 2282, 2339
NspI	RCATGY	4 cut(s)	587, 614, 1318, 1484
PaeI	GCATGC	2 cut(s)	587, 614
PaeR7I	CTCGAG	1 cut(s)	560
PagI	TCATGA	1 cut(s)	1363
PceI	AGGCCT	3 cut(s)	1147, 1630, 1687
PciI	ACATGT	1 cut(s)	1480
PcsI	WCGNNNNNNNCGW	2 cut(s)	216, 558
PfeI	GAWTC	5 cut(s)	149, 1048, 1169, 1605, 2219
PflFI	GACNNNGTC	1 cut(s)	1256
PfoI	TCCNGGA	1 cut(s)	459
PkrI	GCNGC	5 cut(s)	34, 199, 1372, 1807, 2204
PleI	GAGTC	2 cut(s)	65, 346
PpsI	GAGTC	2 cut(s)	65, 346
Ppu21I	YACGTR	1 cut(s)	1380
PpuMI	RGGWCCY	2 cut(s)	1707, 1780
PscI	ACATGT	1 cut(s)	1480
PshAI	GACNNNNGTC	1 cut(s)	56
PshBI	ATTAAT	1 cut(s)	879
Psp124BI	GAGCTC	1 cut(s)	468
Psp5II	RGGWCCY	2 cut(s)	1707, 1780
Psp6I	CCWGG	4 cut(s)	62, 87, 459, 1183
PspEI	GGTNACC	1 cut(s)	1544
PspFI	CCCAGC	1 cut(s)	1549
PspGI	CCWGG	4 cut(s)	62, 87, 459, 1183
PspN4I	GGNNCC	2 cut(s)	105, 138
PspPI	GGNCC	7 cut(s)	79, 91, 269, 1252, 1707, 1780, 1877
PspPPI	RGGWCCY	2 cut(s)	1707, 1780
PspXI	VCTCGAGB	1 cut(s)	560
PstI	CTGCAG	1 cut(s)	1375
PstNI	CAGNNNCTG	1 cut(s)	1811
PsuI	RGATCY	3 cut(s)	160, 1264, 2180
PsyI	GACNNNGTC	1 cut(s)	1256
RsaI	GTAC	6 cut(s)	1739, 1853, 1906, 1915, 2300, 2372
RsaNI	GTAC	6 cut(s)	1738, 1852, 1905, 1914, 2299, 2371
RseI	CAYNNNNRTG	2 cut(s)	603, 609
SacI	GAGCTC	1 cut(s)	468
SaqAI	TTAA	9 cut(s)	180, 314, 333, 864, 879, 1104, 1272, 1395, 1586
SatI	GCNGC	5 cut(s)	33, 198, 1371, 1806, 2203
Sau96I	GGNCC	7 cut(s)	79, 91, 269, 1252, 1707, 1780, 1877
SchI	GAGTC	2 cut(s)	66, 347
ScrFI	CCNGG	4 cut(s)	64, 89, 461, 1185
SduI	GDGCHC	4 cut(s)	468, 642, 2014, 2113
SexAI	ACCWGGT	1 cut(s)	87
SfaNI	GCATC	9 cut(s)	121, 257, 700, 952, 1078, 1087, 1978, 2077, 2103
SfcI	CTRYAG	3 cut(s)	342, 1371, 2161
Sfr274I	CTCGAG	1 cut(s)	560
SinI	GGWCC	5 cut(s)	91, 1252, 1707, 1780, 1877
SlaI	CTCGAG	1 cut(s)	560
SmiMI	CAYNNNNRTG	2 cut(s)	603, 609
SmlI	CTYRAG	2 cut(s)	560, 1271
SmoI	CTYRAG	2 cut(s)	560, 1271
SphI	GCATGC	2 cut(s)	587, 614
Sse9I	AATT	4 cut(s)	192, 368, 1070, 1399
SseBI	AGGCCT	3 cut(s)	1147, 1630, 1687
SspMI	CTAG	4 cut(s)	588, 701, 1509, 1704
SstI	GAGCTC	1 cut(s)	468
StuI	AGGCCT	3 cut(s)	1147, 1630, 1687
StyD4I	CCNGG	4 cut(s)	62, 87, 459, 1183
StyI	CCWWGG	2 cut(s)	1092, 1793
TaaI	ACNGT	7 cut(s)	16, 832, 891, 917, 1216, 2000, 2115
TaiI	ACGT	4 cut(s)	1382, 2047, 2289, 2346
TaqI	TCGA	6 cut(s)	219, 561, 1051, 1356, 1501, 1603
TasI	AATT	4 cut(s)	192, 368, 1070, 1399
TatI	WGTACW	3 cut(s)	1904, 2298, 2370
TauI	GCSGC	2 cut(s)	35, 200
TfiI	GAWTC	5 cut(s)	149, 1048, 1169, 1605, 2219
Tru1I	TTAA	9 cut(s)	180, 314, 333, 864, 879, 1104, 1272, 1395, 1586
Tru9I	TTAA	9 cut(s)	180, 314, 333, 864, 879, 1104, 1272, 1395, 1586
TscAI	CASTG	6 cut(s)	879, 896, 922, 1624, 2064, 2344
TseFI	GTSAC	5 cut(s)	58, 1544, 2165, 2282, 2339
TseI	GCWGC	3 cut(s)	1370, 1805, 2202
Tsp45I	GTSAC	5 cut(s)	58, 1544, 2165, 2282, 2339
TspGWI	ACGGA	3 cut(s)	241, 679, 1965
TspRI	CASTG	6 cut(s)	879, 896, 922, 1624, 2064, 2344
Tth111I	GACNNNGTC	1 cut(s)	1256
Vha464I	CTTAAG	1 cut(s)	1271
VpaK11BI	GGWCC	5 cut(s)	91, 1252, 1707, 1780, 1877
VspI	ATTAAT	1 cut(s)	879
XagI	CCTNNNNNAGG	1 cut(s)	1714
XapI	RAATTY	1 cut(s)	1070
XbaI	TCTAGA	1 cut(s)	700
XceI	RCATGY	4 cut(s)	587, 614, 1318, 1484
XhoI	CTCGAG	1 cut(s)	560
XspI	CTAG	4 cut(s)	588, 701, 1509, 1704

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.