Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009956

Physical Location & Seq

Genomic Coordinates Reverse (-)

296582 .. 298648

Gene Structure 2067 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G01840.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1965 bp

ATGGCTGTTTCAGTTAGTAAGCAGTACATGACAAGTCTTGTAGTGATCTTGCTCTTCATCTCCTTATCATCTCTCTCTCCAACTTCAACTTCACACAGCTGTGACCCTGTCGAAGAAGAAGAAGAAGCCTCCTCCTTCGGTTACGTTTGCCACTCAAACCTCCAAAAGTGCCACACTTTCGCCATTCTCAGAGCCAAACCTCCCTTCTATTCCCTCTCGGACCTGAGTCGCCATCTTGGTCTCGACGCAGACGACGAGTATGTTCCGAAAGGTCAGTTACTCTTGATCCCAATAGAGTGCAGGTGTAATGGAAGCATCTACGAGGCCAGTCTCATTAAAAATTGCGTTAAAGGAGACACCTTTCGCTCTGTCTCTCAGTCTCTGCAAGGCTTGACCACCTGCCTATCTATCAGAGAGAAGAATCCACATATTTCCGAAGACAAGCTTGGCGACAACATTAAACTGCGTTTGGCGATCAGGTGCTCTTGTCCACAAGAAGGCGTTTCAAACGCTAGTTTTCTCGTTACGTATCCGGTGGGCGTCCGCGACAGCGTTTCAAGCCTGGCGGTTAGGTTTAACACAACAGAGGATGCCATTGTCTCTGCAAACAACAAATCTGGTGTGGTTCCACTCAAGCCTGCTCTCATCCCTCTTGATCACAAACCAGAGAAACAAGGATCCCGGAAAAGAAATCCATCCAAGAAGAAACGGTCAAAGATGAAGCTCATGATCGCTGTGAGCAGCGCGATTGCTGGAGTTTGCGGTCTTGTCACTCTCATGGTGTTTGGTTACTTACACTGGAAGAAAGAGACGCAGATTCAAACGCAAACGCAAAAGTGGATTAGCAACAAAGACCCCGAGACGCGGCAGCTGAGTCTGAGCATCCGAACCACGAGTGACAAGAAAATCTCGTTTGAAGGGTCGCAGGACGGTTCCATCTTGGATTCTCACAACACCGTCGGCACCACAACGCCCCGAAAACCCGTTCTGGAGATTTACGCGTTTGAAGAGTTAGAGAAGGCCACGGAGAATTTCAGTTCAAGCAATCACATCAAAGGTTCGGTTTATTTCGGTTCGCTCAAAGGCAAAGACTTGGCTATAAAGCAAGTCAATGCAGATGAAATGAAAAGATTCGATTTCGGGCTTCTCAATGATCAGTCACACTACTATAACCACAATGTGATTAGGGTTCTTGGAACATGTTTTAGAGAAATCGATCAAGATTCTTATCTGGTTTTCGAGTATGCAAGGAATGGGTCCCTGTGGGATTGGATTCAGAACAAATTGGCCATCAAGAATCAATTCATCGAGTCTTGTTACTGTTTCTTGGCATGGAAACAGAGGATCAAGATATGTCACGATGTCGCCATCGCGTTAAAGTATATGCATCGGATCAACTACGTCCACGGCAACATCAAGAGCAGAAACATCTTCTTGAACGAAGATCTCAGAGGTAAAGTCGGAAACTTTGGGATGTCAAAGTGCGTAACCAATGAATTAGCCACAGAAGAGAACCTTATAGAGAGTTCACTGTCTCCAGCTTCTGACATATTTGCTTACGGGATAATCGTAATGGAGGTTTTGTCTGGACAAACCCCAGATATGTTGCTTGGATTGCAAGAAGTAGAGACAACATCCCTTGGGACACAAGAAACTTTTGTTTCCGAATGGAGTAGATTAAGAAGGCTTCTCGGGGACAAGGAAAAGCTGAGGGAAGTGATGGACAGCACATTGGGAGAGAGCTATTCGGTTGATTCTGCGTTTGAAATCGCAAGTATTGCAAGAGATTGTACTGCAGAAGAAGCCGAGTCAAGGCCGAGCGCGGTTGAGATTGCAGAGAGGGTTTCAAGATTGGTGGATGACGATGAAGATGAAGAAGATGAGGCAGTAATAGATAGAGAGAGTACCTTAATTTCAGAGAGTTCATACAAGCCTTTGGTAAAGAAGAGTAGTATAATAGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LysM Pkinase Pkinase_Tyr

Protein Analysis

654

Amino Acids

73.16

Weight (kDa)

5.89

Isoelectric Point (pI)

53.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM2_CERK1_LYK3_4_5	PF23472	107 - 160	1e-05	LYK3/4/5 LysM2 domain
LysM3_LYK4_5	PF23473	173 - 218	3.4e-06	LYK4/5 LysM3 domain
PK_Tyr_Ser-Thr	PF07714	354 - 612	4.6e-23	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	361 - 612	3.5e-19	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0009956)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01840
fragaria_vesca	FvH4_6g53170 FvH4_6g53170 FvH4_6g53170
malus_domestica	MD09G1013400.v1.1 MD17G1014100.v1.1
prunus_persica	Prupe.3G303700_v2.0.a1
pyrus_communis	pycom111g01140
rosa_chinensis	RchiOBHm_Chr2g0175211
rosa_laevigata	RLG00000022311
rosa_multiflora	Rmu_sc0003920.1_g000020 Rmu_sc0010642.1_g000015 Rmu_sc0043138.1_g000001
rosa_roxburghii	Rroxscaffold_2G00077490
rosa_rugosa	Rorug02G0581400 Rorug02G0581500
rosa_samantha	Rh2AG662100 Rh2BG673300 Rh2CG636500 Rh2DG687200
rosa_wichuraiana	Rw2G054300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	291, 407
Acc36I	ACCTGC	2 cut(s)	291, 407
AccB1I	GGYRCC	1 cut(s)	962
AccII	CGCG	6 cut(s)	546, 746, 865, 1001, 1373, 1823
AciI	CCGC	5 cut(s)	544, 566, 762, 865, 1823
AclWI	GGATC	5 cut(s)	280, 672, 685, 1352, 1400
AcoI	YGGCCR	1 cut(s)	1287
AcsI	RAATTY	1 cut(s)	1030
AcyI	GRCGYC	1 cut(s)	540
AdeI	CACNNNGTG	1 cut(s)	1180
AfaI	GTAC	3 cut(s)	26, 1792, 1906
AfiI	CCNNNNNNNGG	3 cut(s)	497, 864, 1812
AflIII	ACRYGT	2 cut(s)	999, 1199
AjnI	CCWGG	1 cut(s)	561
AjuI	GAANNNNNNNTTGG	6 cut(s)	73, 105, 188, 220, 429, 461
AleI	CACNNNNGTG	1 cut(s)	99
AluBI	AGCT	7 cut(s)	99, 445, 724, 871, 1541, 1708, 1743
AluI	AGCT	7 cut(s)	99, 445, 724, 871, 1541, 1708, 1743
Alw21I	GWGCWC	1 cut(s)	485
AlwI	GGATC	5 cut(s)	280, 672, 685, 1352, 1400
AlwNI	CAGNNNCTG	2 cut(s)	382, 1544
Ama87I	CYCGRG	2 cut(s)	857, 1691
AoxI	GGCC	4 cut(s)	324, 1020, 1287, 1814
ApeKI	GCWGC	2 cut(s)	741, 868
ApoI	RAATTY	1 cut(s)	1030
Asp700I	GAANNNNTTC	2 cut(s)	1130, 1301
AspLEI	GCGC	2 cut(s)	746, 1823
AspS9I	GGNCC	2 cut(s)	220, 1257
AsuC2I	CCSGG	1 cut(s)	682
AvaI	CYCGRG	2 cut(s)	857, 1691
AvaII	GGWCC	2 cut(s)	220, 1257
BalI	TGGCCA	1 cut(s)	1289
BamHI	GGATCC	1 cut(s)	677
BanI	GGYRCC	1 cut(s)	962
BauI	CACGAG	1 cut(s)	892
BbsI	GAAGAC	1 cut(s)	444
Bbv12I	GWGCWC	1 cut(s)	485
BbvCI	CCTCAGC	1 cut(s)	1709
BbvI	GCAGC	2 cut(s)	753, 880
BccI	CCATC	6 cut(s)	240, 703, 944, 1298, 1376, 1714
BceAI	ACGGC	1 cut(s)	1423
BciT130I	CCWGG	1 cut(s)	563
BciVI	GTATCC	1 cut(s)	540
BclI	TGATCA	2 cut(s)	655, 1153
BcnI	CCSGG	1 cut(s)	682
BfaI	CTAG	1 cut(s)	513
BfmI	CTRYAG	1 cut(s)	1794
BfuAI	ACCTGC	2 cut(s)	291, 407
BfuI	GTATCC	1 cut(s)	540
BglII	AGATCT	1 cut(s)	1444
BisI	GCNGC	3 cut(s)	742, 866, 869
BlsI	GCNGC	3 cut(s)	743, 867, 870
Bme1390I	CCNGG	2 cut(s)	563, 682
Bme18I	GGWCC	2 cut(s)	220, 1257
BmeT110I	CYCGRG	2 cut(s)	857, 1691
BmgT120I	GGNCC	2 cut(s)	220, 1257
BmiI	GGNNCC	6 cut(s)	627, 679, 934, 964, 1258, 1259
BmrFI	CCNGG	2 cut(s)	563, 682
BmsI	GCATC	4 cut(s)	324, 580, 891, 1396
BoxI	GACNNNNGTC	1 cut(s)	225
BpiI	GAAGAC	1 cut(s)	444
BpmI	CTGGAG	3 cut(s)	774, 1010, 1521
Bpu10I	CCTNAGC	1 cut(s)	1709
BpuEI	CTTGAG	1 cut(s)	617
BpuMI	CCSGG	1 cut(s)	682
Bsa29I	ATCGAT	1 cut(s)	1215
BsaAI	YACGTR	1 cut(s)	528
BsaBI	GATNNNNATC	1 cut(s)	1227
BsaHI	GRCGYC	1 cut(s)	540
BsaI	GGTCTC	1 cut(s)	245
BsaJI	CCNNGG	3 cut(s)	1023, 1405, 1639
BsaWI	WCCGGW	1 cut(s)	532
BsaXI	ACNNNNNCTCC	2 cut(s)	1568, 1598
Bsc4I	CCNNNNNNNGG	3 cut(s)	497, 864, 1812
Bse1I	ACTGG	2 cut(s)	327, 803
Bse8I	GATNNNNATC	1 cut(s)	1227
BseBI	CCWGG	1 cut(s)	563
BseCI	ATCGAT	1 cut(s)	1215
BseDI	CCNNGG	3 cut(s)	1023, 1405, 1639
BseGI	GGATG	7 cut(s)	595, 645, 695, 882, 1479, 1634, 1864
BseJI	GATNNNNATC	1 cut(s)	1227
BseLI	CCNNNNNNNGG	3 cut(s)	497, 864, 1812
BseMII	CTCAG	7 cut(s)	202, 215, 389, 863, 869, 1462, 1700
BseNI	ACTGG	2 cut(s)	327, 803
BseRI	GAGGAG	1 cut(s)	121
BseXI	GCAGC	2 cut(s)	753, 880
BsgI	GTGCAG	1 cut(s)	319
Bsh1236I	CGCG	6 cut(s)	546, 746, 865, 1001, 1373, 1823
BshFI	GGCC	4 cut(s)	326, 1022, 1289, 1816
BshNI	GGYRCC	1 cut(s)	962
BshVI	ATCGAT	1 cut(s)	1215
BsiHKAI	GWGCWC	1 cut(s)	485
BsiHKCI	CYCGRG	2 cut(s)	857, 1691
BsiSI	CCGG	2 cut(s)	533, 682
BslFI	GGGAC	3 cut(s)	1243, 1657, 1709
BslI	CCNNNNNNNGG	3 cut(s)	497, 864, 1812
BsmBI	CGTCTC	2 cut(s)	803, 854
BsmFI	GGGAC	3 cut(s)	1243, 1657, 1709
BsnI	GGCC	4 cut(s)	326, 1022, 1289, 1816
Bso31I	GGTCTC	1 cut(s)	245
BsoBI	CYCGRG	2 cut(s)	857, 1691
Bsp1286I	GDGCHC	1 cut(s)	485
BspACI	CCGC	5 cut(s)	544, 566, 762, 865, 1823
BspANI	GGCC	4 cut(s)	326, 1022, 1289, 1816
BspCNI	CTCAG	7 cut(s)	201, 216, 388, 864, 870, 1461, 1701
BspDI	ATCGAT	1 cut(s)	1215
BspFNI	CGCG	6 cut(s)	546, 746, 865, 1001, 1373, 1823
BspHI	TCATGA	1 cut(s)	726
BspLI	GGNNCC	6 cut(s)	627, 679, 934, 964, 1258, 1259
BspMAI	CTGCAG	1 cut(s)	1798
BspMI	ACCTGC	2 cut(s)	291, 407
BspPI	GGATC	5 cut(s)	280, 672, 685, 1352, 1400
BspQI	GCTCTTC	1 cut(s)	59
BspT107I	GGYRCC	1 cut(s)	962
BspTNI	GGTCTC	1 cut(s)	245
BsrI	ACTGG	2 cut(s)	327, 803
BssECI	CCNNGG	3 cut(s)	1023, 1405, 1639
BssNI	GRCGYC	1 cut(s)	540
BssSI	CACGAG	1 cut(s)	892
BssT1I	CCWWGG	1 cut(s)	1639
Bst2BI	CACGAG	1 cut(s)	892
Bst2UI	CCWGG	1 cut(s)	563
Bst4CI	ACNGT	5 cut(s)	711, 932, 958, 1322, 1533
Bst6I	CTCTTC	4 cut(s)	59, 1002, 1503, 1940
BstACI	GRCGYC	1 cut(s)	540
BstAPI	GCANNNNNTGC	1 cut(s)	1778
BstBAI	YACGTR	1 cut(s)	528
BstC8I	GCNNGC	1 cut(s)	639
BstDEI	CTNAG	7 cut(s)	188, 224, 375, 872, 878, 1448, 1709
BstDSI	CCRYGG	2 cut(s)	1023, 1405
BstF5I	GGATG	7 cut(s)	595, 645, 695, 882, 1479, 1634, 1864
BstFNI	CGCG	6 cut(s)	546, 746, 865, 1001, 1373, 1823
BstHHI	GCGC	2 cut(s)	746, 1823
BstMWI	GCNNNNNNNGC	4 cut(s)	558, 1615, 1778, 1802
BstNI	CCWGG	1 cut(s)	563
BstNSI	RCATGY	1 cut(s)	1203
BstPAI	GACNNNNGTC	1 cut(s)	225
BstSCI	CCNGG	2 cut(s)	561, 680
BstSFI	CTRYAG	1 cut(s)	1794
BstSNI	TACGTA	1 cut(s)	528
BstUI	CGCG	6 cut(s)	546, 746, 865, 1001, 1373, 1823
BstV1I	GCAGC	2 cut(s)	753, 880
BstV2I	GAAGAC	1 cut(s)	444
BstX2I	RGATCY	2 cut(s)	677, 1444
BstYI	RGATCY	2 cut(s)	677, 1444
Bsu15I	ATCGAT	1 cut(s)	1215
BsuI	GTATCC	1 cut(s)	540
BsuRI	GGCC	4 cut(s)	326, 1022, 1289, 1816
BsuTUI	ATCGAT	1 cut(s)	1215
BtgI	CCRYGG	2 cut(s)	1023, 1405
BtgZI	GCGATG	1 cut(s)	1354
BtsCI	GGATG	7 cut(s)	595, 645, 695, 882, 1479, 1634, 1864
BtsIMutI	CAGTG	2 cut(s)	796, 1529
BveI	ACCTGC	2 cut(s)	291, 407
Cac8I	GCNNGC	1 cut(s)	639
CaiI	CAGNNNCTG	2 cut(s)	382, 1544
CciI	TCATGA	1 cut(s)	726
CfoI	GCGC	2 cut(s)	746, 1823
Cfr13I	GGNCC	2 cut(s)	220, 1257
ClaI	ATCGAT	1 cut(s)	1215
CseI	GACGC	4 cut(s)	254, 529, 820, 871
Csp6I	GTAC	3 cut(s)	25, 1791, 1905
CspCI	CAANNNNNGTGG	2 cut(s)	1836, 1871
CviAII	CATG	5 cut(s)	28, 727, 778, 1200, 1332
CviQI	GTAC	3 cut(s)	25, 1791, 1905
DdeI	CTNAG	7 cut(s)	188, 224, 375, 872, 878, 1448, 1709
DraIII	CACNNNGTG	1 cut(s)	1180
EaeI	YGGCCR	1 cut(s)	1287
Eam1104I	CTCTTC	4 cut(s)	59, 1002, 1503, 1940
EarI	CTCTTC	4 cut(s)	59, 1002, 1503, 1940
Eco105I	TACGTA	1 cut(s)	528
Eco130I	CCWWGG	1 cut(s)	1639
Eco31I	GGTCTC	1 cut(s)	245
Eco47I	GGWCC	2 cut(s)	220, 1257
Eco88I	CYCGRG	2 cut(s)	857, 1691
EcoO109I	RGGNCCY	1 cut(s)	1257
EcoRII	CCWGG	1 cut(s)	561
EcoT14I	CCWWGG	1 cut(s)	1639
EcoT22I	ATGCAT	1 cut(s)	1389
ErhI	CCWWGG	1 cut(s)	1639
Esp3I	CGTCTC	2 cut(s)	803, 854
FaeI	CATG	5 cut(s)	31, 730, 781, 1203, 1335
FalI	AAGNNNNNCTT	4 cut(s)	429, 461, 1500, 1532
FaqI	GGGAC	3 cut(s)	1243, 1657, 1709
FatI	CATG	5 cut(s)	27, 726, 777, 1199, 1331
FbaI	TGATCA	2 cut(s)	655, 1153
Fnu4HI	GCNGC	3 cut(s)	742, 866, 869
FokI	GGATG	7 cut(s)	602, 632, 682, 869, 1486, 1621, 1871
Fsp4HI	GCNGC	3 cut(s)	742, 866, 869
FspBI	CTAG	1 cut(s)	513
GlaI	GCGC	2 cut(s)	745, 1822
GluI	GCNGC	3 cut(s)	742, 866, 869
GsuI	CTGGAG	3 cut(s)	774, 1010, 1521
HaeIII	GGCC	4 cut(s)	326, 1022, 1289, 1816
HapII	CCGG	2 cut(s)	533, 682
HgaI	GACGC	4 cut(s)	254, 529, 820, 871
HhaI	GCGC	2 cut(s)	746, 1823
Hin1I	GRCGYC	1 cut(s)	540
Hin1II	CATG	5 cut(s)	31, 730, 781, 1203, 1335
Hin6I	GCGC	2 cut(s)	744, 1821
HinP1I	GCGC	2 cut(s)	744, 1821
HindIII	AAGCTT	1 cut(s)	443
HpaII	CCGG	2 cut(s)	533, 682
Hpy166II	GTNNAC	3 cut(s)	491, 1405, 1529
Hpy8I	GTNNAC	3 cut(s)	491, 1405, 1529
Hpy99I	CGWCG	3 cut(s)	248, 257, 962
HpyAV	CCTTC	6 cut(s)	145, 214, 491, 911, 1012, 1677
HpyCH4III	ACNGT	5 cut(s)	711, 932, 958, 1322, 1533
HpyCH4IV	ACGT	3 cut(s)	144, 527, 1401
HpyF10VI	GCNNNNNNNGC	4 cut(s)	558, 1615, 1778, 1802
HpyF3I	CTNAG	7 cut(s)	188, 224, 375, 872, 878, 1448, 1709
HpySE526I	ACGT	3 cut(s)	144, 527, 1401
Hsp92I	GRCGYC	1 cut(s)	540
Hsp92II	CATG	5 cut(s)	31, 730, 781, 1203, 1335
HspAI	GCGC	2 cut(s)	744, 1821
KflI	GGGWCCC	1 cut(s)	1257
Ksp22I	TGATCA	2 cut(s)	655, 1153
LguI	GCTCTTC	1 cut(s)	59
Lsp1109I	GCAGC	2 cut(s)	753, 880
LweI	GCATC	4 cut(s)	324, 580, 891, 1396
MaeI	CTAG	1 cut(s)	513
MaeII	ACGT	3 cut(s)	144, 527, 1401
MflI	RGATCY	2 cut(s)	677, 1444
MhlI	GDGCHC	1 cut(s)	485
MlsI	TGGCCA	1 cut(s)	1289
MluCI	AATT	6 cut(s)	340, 1030, 1283, 1301, 1496, 1911
MluI	ACGCGT	1 cut(s)	999
MluNI	TGGCCA	1 cut(s)	1289
MlyI	GAGTC	4 cut(s)	235, 883, 1319, 1817
MmeI	TCCRAC	2 cut(s)	104, 1441
Mox20I	TGGCCA	1 cut(s)	1289
Mph1103I	ATGCAT	1 cut(s)	1389
MroXI	GAANNNNTTC	2 cut(s)	1130, 1301
MscI	TGGCCA	1 cut(s)	1289
MseI	TTAA	8 cut(s)	336, 348, 459, 576, 1376, 1679, 1910, 1963
MslI	CAYNNNNRTG	2 cut(s)	99, 776
Msp20I	TGGCCA	1 cut(s)	1289
MspA1I	CMGCKG	2 cut(s)	99, 871
MspI	CCGG	2 cut(s)	533, 682
MspR9I	CCNGG	2 cut(s)	563, 682
MvaI	CCWGG	1 cut(s)	563
MvnI	CGCG	6 cut(s)	546, 746, 865, 1001, 1373, 1823
MwoI	GCNNNNNNNGC	4 cut(s)	558, 1615, 1778, 1802
NciI	CCSGG	1 cut(s)	682
NlaIII	CATG	5 cut(s)	31, 730, 781, 1203, 1335
NlaIV	GGNNCC	6 cut(s)	627, 679, 934, 964, 1258, 1259
NmeAIII	GCCGAG	2 cut(s)	1831, 1842
NmuCI	GTSAC	5 cut(s)	101, 769, 896, 1158, 1355
NsiI	ATGCAT	1 cut(s)	1389
NspI	RCATGY	1 cut(s)	1203
OliI	CACNNNNGTG	1 cut(s)	99
PagI	TCATGA	1 cut(s)	726
PaqCI	CACCTGC	2 cut(s)	291, 407
PciI	ACATGT	1 cut(s)	1199
PciSI	GCTCTTC	1 cut(s)	59
PcsI	WCGNNNNNNNCGW	3 cut(s)	249, 252, 1566
PdmI	GAANNNNTTC	2 cut(s)	1130, 1301
PfeI	GAWTC	8 cut(s)	421, 817, 944, 1131, 1223, 1273, 1297, 1754
PflFI	GACNNNGTC	1 cut(s)	107
PfoI	TCCNGGA	1 cut(s)	680
PkrI	GCNGC	3 cut(s)	743, 867, 870
PleI	GAGTC	4 cut(s)	234, 882, 1318, 1816
PpsI	GAGTC	4 cut(s)	234, 882, 1318, 1816
Ppu21I	YACGTR	1 cut(s)	528
PpuMI	RGGWCCY	1 cut(s)	1257
PscI	ACATGT	1 cut(s)	1199
PshAI	GACNNNNGTC	1 cut(s)	225
Psp5II	RGGWCCY	1 cut(s)	1257
Psp6I	CCWGG	1 cut(s)	561
PspGI	CCWGG	1 cut(s)	561
PspN4I	GGNNCC	6 cut(s)	627, 679, 934, 964, 1258, 1259
PspPI	GGNCC	2 cut(s)	220, 1257
PspPPI	RGGWCCY	1 cut(s)	1257
PstI	CTGCAG	1 cut(s)	1798
PstNI	CAGNNNCTG	2 cut(s)	382, 1544
PsuI	RGATCY	2 cut(s)	677, 1444
PsyI	GACNNNGTC	1 cut(s)	107
PvuII	CAGCTG	2 cut(s)	99, 871
RsaI	GTAC	3 cut(s)	26, 1792, 1906
RsaNI	GTAC	3 cut(s)	25, 1791, 1905
RseI	CAYNNNNRTG	2 cut(s)	99, 776
SapI	GCTCTTC	1 cut(s)	59
SaqAI	TTAA	8 cut(s)	336, 348, 459, 576, 1376, 1679, 1910, 1963
SatI	GCNGC	3 cut(s)	742, 866, 869
Sau96I	GGNCC	2 cut(s)	220, 1257
SchI	GAGTC	4 cut(s)	235, 883, 1319, 1817
ScrFI	CCNGG	2 cut(s)	563, 682
SduI	GDGCHC	1 cut(s)	485
SfaNI	GCATC	4 cut(s)	324, 580, 891, 1396
SfcI	CTRYAG	1 cut(s)	1794
SinI	GGWCC	2 cut(s)	220, 1257
SmiMI	CAYNNNNRTG	2 cut(s)	99, 776
SmlI	CTYRAG	1 cut(s)	632
SmoI	CTYRAG	1 cut(s)	632
SnaBI	TACGTA	1 cut(s)	528
Sse9I	AATT	6 cut(s)	340, 1030, 1283, 1301, 1496, 1911
SsiI	CCGC	5 cut(s)	544, 566, 762, 865, 1823
SspMI	CTAG	1 cut(s)	513
StyD4I	CCNGG	2 cut(s)	561, 680
StyI	CCWWGG	1 cut(s)	1639
TaaI	ACNGT	5 cut(s)	711, 932, 958, 1322, 1533
TaiI	ACGT	3 cut(s)	147, 530, 1404
TaqI	TCGA	6 cut(s)	111, 243, 1134, 1215, 1239, 1308
TasI	AATT	6 cut(s)	340, 1030, 1283, 1301, 1496, 1911
TatI	WGTACW	2 cut(s)	24, 1790
TauI	GCSGC	1 cut(s)	868
TfiI	GAWTC	8 cut(s)	421, 817, 944, 1131, 1223, 1273, 1297, 1754
Tru1I	TTAA	8 cut(s)	336, 348, 459, 576, 1376, 1679, 1910, 1963
Tru9I	TTAA	8 cut(s)	336, 348, 459, 576, 1376, 1679, 1910, 1963
TscAI	CASTG	2 cut(s)	803, 1536
TseFI	GTSAC	5 cut(s)	101, 769, 896, 1158, 1355
TseI	GCWGC	2 cut(s)	741, 868
Tsp45I	GTSAC	5 cut(s)	101, 769, 896, 1158, 1355
TspDTI	ATGAA	9 cut(s)	46, 734, 1134, 1139, 1294, 1509, 1881, 1887, 1914
TspGWI	ACGGA	1 cut(s)	1040
TspRI	CASTG	2 cut(s)	803, 1536
Tth111I	GACNNNGTC	1 cut(s)	107
VpaK11BI	GGWCC	2 cut(s)	220, 1257
XapI	RAATTY	1 cut(s)	1030
XceI	RCATGY	1 cut(s)	1203
XmnI	GAANNNNTTC	2 cut(s)	1130, 1301
XspI	CTAG	1 cut(s)	513
Zsp2I	ATGCAT	1 cut(s)	1389

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.