LysM domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G01840 |
| fragaria_vesca | FvH4_6g53170 FvH4_6g53170 FvH4_6g53170 |
| malus_domestica | MD09G1013400.v1.1 MD17G1014100.v1.1 |
| prunus_persica | Prupe.3G303700_v2.0.a1 |
| pyrus_communis | pycom111g01140 |
| rosa_chinensis | RchiOBHm_Chr2g0175211 |
| rosa_laevigata | RLG00000022311 |
| rosa_multiflora | Rmu_sc0003920.1_g000020 Rmu_sc0010642.1_g000015 Rmu_sc0043138.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00077490 |
| rosa_rugosa | Rorug02G0581400 Rorug02G0581500 |
| rosa_samantha | Rh2AG662100 Rh2BG673300 Rh2CG636500 Rh2DG687200 |
| rosa_wichuraiana | Rw2G054300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1013 |
| Acc36I | ACCTGC | 1 cut(s) | 461 |
| AccB1I | GGYRCC | 1 cut(s) | 1660 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 734 |
| AccI | GTMKAC | 1 cut(s) | 1929 |
| AccIII | TCCGGA | 1 cut(s) | 204 |
| AciI | CCGC | 2 cut(s) | 71, 1863 |
| AclWI | GGATC | 4 cut(s) | 172, 1036, 1165, 1357 |
| AcoI | YGGCCR | 2 cut(s) | 1171, 1458 |
| AcuI | CTGAAG | 3 cut(s) | 450, 497, 1117 |
| AdeI | CACNNNGTG | 2 cut(s) | 869, 1081 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 405, 734, 749, 956, 1153, 1227, 1958 |
| AflIII | ACRYGT | 1 cut(s) | 2085 |
| AgeI | ACCGGT | 1 cut(s) | 261 |
| AgsI | TTSAA | 8 cut(s) | 52, 235, 440, 628, 928, 1357, 1552, 1623 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1308 |
| AjnI | CCWGG | 1 cut(s) | 1677 |
| AleI | CACNNNNGTG | 1 cut(s) | 1680 |
| Alw21I | GWGCWC | 1 cut(s) | 2042 |
| Alw26I | GTCTC | 6 cut(s) | 104, 490, 1021, 1085, 1181, 1942 |
| AlwI | GGATC | 4 cut(s) | 172, 1036, 1165, 1357 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 97 |
| Aor13HI | TCCGGA | 1 cut(s) | 204 |
| AoxI | GGCC | 5 cut(s) | 751, 1171, 1458, 1464, 1763 |
| AsiGI | ACCGGT | 1 cut(s) | 261 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1320, 1671 |
| AspLEI | GCGC | 1 cut(s) | 1206 |
| AspS9I | GGNCC | 1 cut(s) | 752 |
| AsuHPI | GGTGA | 6 cut(s) | 598, 608, 971, 1253, 1667, 1883 |
| AsuNHI | GCTAGC | 1 cut(s) | 887 |
| BaeGI | GKGCMC | 1 cut(s) | 1295 |
| BalI | TGGCCA | 1 cut(s) | 1460 |
| BanI | GGYRCC | 1 cut(s) | 1660 |
| BanII | GRGCYC | 2 cut(s) | 777, 2042 |
| BauI | CACGAG | 1 cut(s) | 62 |
| BbsI | GAAGAC | 1 cut(s) | 1941 |
| Bbv12I | GWGCWC | 1 cut(s) | 2042 |
| BbvCI | CCTCAGC | 1 cut(s) | 1439 |
| BccI | CCATC | 4 cut(s) | 470, 1229, 1275, 1849 |
| BceAI | ACGGC | 3 cut(s) | 753, 1158, 1186 |
| BciT130I | CCWGG | 1 cut(s) | 1679 |
| BcoDI | GTCTC | 6 cut(s) | 104, 490, 1021, 1085, 1181, 1942 |
| BfaI | CTAG | 7 cut(s) | 173, 671, 798, 888, 1214, 1953, 2054 |
| BfmI | CTRYAG | 1 cut(s) | 6 |
| BfuAI | ACCTGC | 1 cut(s) | 461 |
| BlpI | GCTNAGC | 1 cut(s) | 2003 |
| Bme1390I | CCNGG | 1 cut(s) | 1679 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1308 |
| BmgT120I | GGNCC | 1 cut(s) | 752 |
| BmiI | GGNNCC | 5 cut(s) | 157, 679, 754, 1430, 1662 |
| BmrFI | CCNGG | 1 cut(s) | 1679 |
| BmrI | ACTGGG | 1 cut(s) | 487 |
| BmsI | GCATC | 6 cut(s) | 115, 264, 810, 1027, 1243, 1879 |
| BmtI | GCTAGC | 1 cut(s) | 891 |
| BmuI | ACTGGG | 1 cut(s) | 487 |
| BoxI | GACNNNNGTC | 1 cut(s) | 85 |
| BpiI | GAAGAC | 1 cut(s) | 1941 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1439, 1844 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2003 |
| BpuEI | CTTGAG | 2 cut(s) | 550, 1210 |
| Bsa29I | ATCGAT | 1 cut(s) | 1059 |
| BsaBI | GATNNNNATC | 1 cut(s) | 338 |
| BsaI | GGTCTC | 2 cut(s) | 104, 1942 |
| BsaJI | CCNNGG | 4 cut(s) | 491, 1125, 1461, 1678 |
| BsaWI | WCCGGW | 3 cut(s) | 204, 261, 583 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 103, 133, 948, 978, 1953, 1983 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 405, 734, 749, 956, 1153, 1227, 1958 |
| Bse118I | RCCGGY | 1 cut(s) | 261 |
| Bse1I | ACTGG | 3 cut(s) | 482, 1367, 1393 |
| Bse3DI | GCAATG | 4 cut(s) | 367, 423, 891, 1398 |
| Bse8I | GATNNNNATC | 1 cut(s) | 338 |
| BseAI | TCCGGA | 1 cut(s) | 204 |
| BseBI | CCWGG | 1 cut(s) | 1679 |
| BseCI | ATCGAT | 1 cut(s) | 1059 |
| BseDI | CCNNGG | 4 cut(s) | 491, 1125, 1461, 1678 |
| BseGI | GGATG | 6 cut(s) | 462, 522, 801, 1042, 1267, 1860 |
| BseJI | GATNNNNATC | 1 cut(s) | 338 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 405, 734, 749, 956, 1153, 1227, 1958 |
| BseMI | GCAATG | 4 cut(s) | 367, 423, 891, 1398 |
| BseMII | CTCAG | 7 cut(s) | 230, 1046, 1103, 1192, 1296, 1430, 1812 |
| BseNI | ACTGG | 3 cut(s) | 482, 1367, 1393 |
| BseRI | GAGGAG | 1 cut(s) | 1121 |
| BseSI | GKGCMC | 1 cut(s) | 1295 |
| BseX3I | CGGCCG | 1 cut(s) | 1171 |
| BseYI | CCCAGC | 1 cut(s) | 805 |
| BsgI | GTGCAG | 3 cut(s) | 127, 205, 1977 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1174 |
| BshFI | GGCC | 5 cut(s) | 753, 1173, 1460, 1466, 1765 |
| BshNI | GGYRCC | 1 cut(s) | 1660 |
| BshTI | ACCGGT | 1 cut(s) | 261 |
| BshVI | ATCGAT | 1 cut(s) | 1059 |
| BsiEI | CGRYCG | 1 cut(s) | 1174 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2042 |
| BsiSI | CCGG | 3 cut(s) | 205, 262, 584 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 405, 734, 749, 956, 1153, 1227, 1958 |
| BsmAI | GTCTC | 6 cut(s) | 104, 490, 1021, 1085, 1181, 1942 |
| BsmBI | CGTCTC | 1 cut(s) | 1181 |
| BsnI | GGCC | 5 cut(s) | 753, 1173, 1460, 1466, 1765 |
| Bso31I | GGTCTC | 2 cut(s) | 104, 1942 |
| Bsp1286I | GDGCHC | 3 cut(s) | 777, 1295, 2042 |
| Bsp13I | TCCGGA | 1 cut(s) | 204 |
| Bsp143I | GATC | 6 cut(s) | 164, 665, 1028, 1053, 1157, 1349 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2003 |
| Bsp19I | CCATGG | 1 cut(s) | 1461 |
| BspACI | CCGC | 2 cut(s) | 71, 1863 |
| BspANI | GGCC | 5 cut(s) | 753, 1173, 1460, 1466, 1765 |
| BspCNI | CTCAG | 7 cut(s) | 231, 1045, 1104, 1191, 1297, 1431, 1811 |
| BspDI | ATCGAT | 1 cut(s) | 1059 |
| BspEI | TCCGGA | 1 cut(s) | 204 |
| BspHI | TCATGA | 1 cut(s) | 1249 |
| BspLI | GGNNCC | 5 cut(s) | 157, 679, 754, 1430, 1662 |
| BspMAI | CTGCAG | 1 cut(s) | 10 |
| BspMI | ACCTGC | 1 cut(s) | 461 |
| BspOI | GCTAGC | 1 cut(s) | 891 |
| BspPI | GGATC | 4 cut(s) | 172, 1036, 1165, 1357 |
| BspQI | GCTCTTC | 1 cut(s) | 1111 |
| BspT107I | GGYRCC | 1 cut(s) | 1660 |
| BspTNI | GGTCTC | 2 cut(s) | 104, 1942 |
| BsrDI | GCAATG | 4 cut(s) | 367, 423, 891, 1398 |
| BsrFI | RCCGGY | 1 cut(s) | 261 |
| BsrI | ACTGG | 3 cut(s) | 482, 1367, 1393 |
| BssAI | RCCGGY | 1 cut(s) | 261 |
| BssECI | CCNNGG | 4 cut(s) | 491, 1125, 1461, 1678 |
| BssMI | GATC | 6 cut(s) | 164, 665, 1028, 1053, 1157, 1349 |
| BssSI | CACGAG | 1 cut(s) | 62 |
| BssT1I | CCWWGG | 2 cut(s) | 491, 1461 |
| Bst2BI | CACGAG | 1 cut(s) | 62 |
| Bst2UI | CCWGG | 1 cut(s) | 1679 |
| Bst4CI | ACNGT | 5 cut(s) | 306, 347, 1049, 1473, 1980 |
| Bst6I | CTCTTC | 4 cut(s) | 723, 1111, 1539, 1989 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1586 |
| BstC8I | GCNNGC | 2 cut(s) | 889, 1763 |
| BstDSI | CCRYGG | 1 cut(s) | 1461 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1956 |
| BstF5I | GGATG | 6 cut(s) | 462, 522, 801, 1042, 1267, 1860 |
| BstHHI | GCGC | 1 cut(s) | 1206 |
| BstKTI | GATC | 6 cut(s) | 167, 668, 1031, 1056, 1160, 1352 |
| BstMAI | GTCTC | 6 cut(s) | 104, 490, 1021, 1085, 1181, 1942 |
| BstMBI | GATC | 6 cut(s) | 164, 665, 1028, 1053, 1157, 1349 |
| BstMCI | CGRYCG | 1 cut(s) | 1174 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 22, 141, 420, 781, 893, 902, 1586, 1913 |
| BstNI | CCWGG | 1 cut(s) | 1679 |
| BstNSI | RCATGY | 1 cut(s) | 2089 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 85 |
| BstSCI | CCNGG | 1 cut(s) | 1677 |
| BstSFI | CTRYAG | 1 cut(s) | 6 |
| BstSLI | GKGCMC | 1 cut(s) | 1295 |
| BstV2I | GAAGAC | 1 cut(s) | 1941 |
| BstX2I | RGATCY | 2 cut(s) | 1028, 1157 |
| BstYI | RGATCY | 2 cut(s) | 1028, 1157 |
| BstZI | CGGCCG | 1 cut(s) | 1171 |
| Bsu15I | ATCGAT | 1 cut(s) | 1059 |
| BsuRI | GGCC | 5 cut(s) | 753, 1173, 1460, 1466, 1765 |
| BsuTUI | ATCGAT | 1 cut(s) | 1059 |
| BtgI | CCRYGG | 1 cut(s) | 1461 |
| BtsCI | GGATG | 6 cut(s) | 462, 522, 801, 1042, 1267, 1860 |
| BtsI | GCAGTG | 1 cut(s) | 139 |
| BtsIMutI | CAGTG | 5 cut(s) | 139, 188, 1186, 1599, 2038 |
| BveI | ACCTGC | 1 cut(s) | 461 |
| Cac8I | GCNNGC | 2 cut(s) | 889, 1763 |
| CaiI | CAGNNNCTG | 1 cut(s) | 97 |
| CciI | TCATGA | 1 cut(s) | 1249 |
| CfoI | GCGC | 1 cut(s) | 1206 |
| Cfr10I | RCCGGY | 1 cut(s) | 261 |
| Cfr13I | GGNCC | 1 cut(s) | 752 |
| ClaI | ATCGAT | 1 cut(s) | 1059 |
| CspAI | ACCGGT | 1 cut(s) | 261 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1598, 1633 |
| CviAII | CATG | 7 cut(s) | 377, 1250, 1370, 1425, 1462, 1576, 2086 |
| DpnI | GATC | 6 cut(s) | 166, 667, 1030, 1055, 1159, 1351 |
| DpnII | GATC | 6 cut(s) | 164, 665, 1028, 1053, 1157, 1349 |
| DraIII | CACNNNGTG | 2 cut(s) | 869, 1081 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1013 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1308 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1013 |
| EaeI | YGGCCR | 2 cut(s) | 1171, 1458 |
| EagI | CGGCCG | 1 cut(s) | 1171 |
| Eam1104I | CTCTTC | 4 cut(s) | 723, 1111, 1539, 1989 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1308 |
| EarI | CTCTTC | 4 cut(s) | 723, 1111, 1539, 1989 |
| Ecl136II | GAGCTC | 1 cut(s) | 2040 |
| EclXI | CGGCCG | 1 cut(s) | 1171 |
| Eco130I | CCWWGG | 2 cut(s) | 491, 1461 |
| Eco24I | GRGCYC | 2 cut(s) | 777, 2042 |
| Eco31I | GGTCTC | 2 cut(s) | 104, 1942 |
| Eco52I | CGGCCG | 1 cut(s) | 1171 |
| Eco53kI | GAGCTC | 1 cut(s) | 2040 |
| Eco57I | CTGAAG | 3 cut(s) | 450, 497, 1117 |
| EcoICRI | GAGCTC | 1 cut(s) | 2040 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1956 |
| EcoRII | CCWGG | 1 cut(s) | 1677 |
| EcoT14I | CCWWGG | 2 cut(s) | 491, 1461 |
| EcoT38I | GRGCYC | 2 cut(s) | 777, 2042 |
| ErhI | CCWWGG | 2 cut(s) | 491, 1461 |
| Esp3I | CGTCTC | 1 cut(s) | 1181 |
| FaeI | CATG | 7 cut(s) | 380, 1253, 1373, 1428, 1465, 1579, 2089 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 14, 46, 1350, 1382 |
| FatI | CATG | 7 cut(s) | 376, 1249, 1369, 1424, 1461, 1575, 2085 |
| FauI | CCCGC | 1 cut(s) | 1856 |
| FauNDI | CATATG | 1 cut(s) | 1714 |
| FblI | GTMKAC | 1 cut(s) | 1929 |
| FokI | GGATG | 6 cut(s) | 449, 509, 788, 1049, 1254, 1867 |
| FriOI | GRGCYC | 2 cut(s) | 777, 2042 |
| FspBI | CTAG | 7 cut(s) | 173, 671, 798, 888, 1214, 1953, 2054 |
| GlaI | GCGC | 1 cut(s) | 1205 |
| GsaI | CCCAGC | 1 cut(s) | 809 |
| HaeIII | GGCC | 5 cut(s) | 753, 1173, 1460, 1466, 1765 |
| HapII | CCGG | 3 cut(s) | 205, 262, 584 |
| HhaI | GCGC | 1 cut(s) | 1206 |
| Hin1II | CATG | 7 cut(s) | 380, 1253, 1373, 1428, 1465, 1579, 2089 |
| Hin6I | GCGC | 1 cut(s) | 1204 |
| HinP1I | GCGC | 1 cut(s) | 1204 |
| HindIII | AAGCTT | 1 cut(s) | 509 |
| HinfI | GANTC | 9 cut(s) | 178, 199, 567, 599, 724, 1316, 1645, 1909, 1997 |
| HpaII | CCGG | 3 cut(s) | 205, 262, 584 |
| HphI | GGTGA | 6 cut(s) | 598, 608, 971, 1253, 1667, 1883 |
| Hpy166II | GTNNAC | 3 cut(s) | 818, 1930, 2048 |
| Hpy188I | TCNGA | 8 cut(s) | 240, 467, 610, 655, 723, 1053, 1801, 1828 |
| Hpy188III | TCNNGA | 9 cut(s) | 122, 205, 268, 564, 1034, 1250, 1313, 1420, 1451 |
| Hpy8I | GTNNAC | 3 cut(s) | 818, 1930, 2048 |
| HpyAV | CCTTC | 7 cut(s) | 359, 434, 555, 587, 1768, 2006, 2053 |
| HpyCH4III | ACNGT | 5 cut(s) | 306, 347, 1049, 1473, 1980 |
| HpyCH4IV | ACGT | 2 cut(s) | 191, 1901 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 22, 141, 420, 781, 893, 902, 1586, 1913 |
| HpySE526I | ACGT | 2 cut(s) | 191, 1901 |
| Hsp92II | CATG | 7 cut(s) | 380, 1253, 1373, 1428, 1465, 1579, 2089 |
| HspAI | GCGC | 1 cut(s) | 1204 |
| Kpn2I | TCCGGA | 1 cut(s) | 204 |
| Kzo9I | GATC | 6 cut(s) | 164, 665, 1028, 1053, 1157, 1349 |
| LguI | GCTCTTC | 1 cut(s) | 1111 |
| LmnI | GCTCC | 4 cut(s) | 30, 884, 1108, 1428 |
| LweI | GCATC | 6 cut(s) | 115, 264, 810, 1027, 1243, 1879 |
| MaeI | CTAG | 7 cut(s) | 173, 671, 798, 888, 1214, 1953, 2054 |
| MaeII | ACGT | 2 cut(s) | 191, 1901 |
| MaeIII | GTNAC | 4 cut(s) | 87, 516, 1004, 1897 |
| MalI | GATC | 6 cut(s) | 166, 667, 1030, 1055, 1159, 1351 |
| MboI | GATC | 6 cut(s) | 164, 665, 1028, 1053, 1157, 1349 |
| MfeI | CAATTG | 1 cut(s) | 897 |
| MflI | RGATCY | 2 cut(s) | 1028, 1157 |
| MhlI | GDGCHC | 3 cut(s) | 777, 1295, 2042 |
| MlsI | TGGCCA | 1 cut(s) | 1460 |
| MluCI | AATT | 9 cut(s) | 383, 618, 810, 897, 918, 1257, 1686, 1876, 1965 |
| MluNI | TGGCCA | 1 cut(s) | 1460 |
| MlyI | GAGTC | 3 cut(s) | 561, 1654, 2006 |
| MmeI | TCCRAC | 1 cut(s) | 1710 |
| Mox20I | TGGCCA | 1 cut(s) | 1460 |
| MroI | TCCGGA | 1 cut(s) | 204 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1320, 1671 |
| MscI | TGGCCA | 1 cut(s) | 1460 |
| MseI | TTAA | 7 cut(s) | 101, 402, 621, 701, 917, 986, 2027 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1512, 1680 |
| Msp20I | TGGCCA | 1 cut(s) | 1460 |
| MspA1I | CMGCKG | 2 cut(s) | 1863, 1895 |
| MspI | CCGG | 3 cut(s) | 205, 262, 584 |
| MspR9I | CCNGG | 1 cut(s) | 1679 |
| MunI | CAATTG | 1 cut(s) | 897 |
| MvaI | CCWGG | 1 cut(s) | 1679 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 22, 141, 420, 781, 893, 902, 1586, 1913 |
| NcoI | CCATGG | 1 cut(s) | 1461 |
| NdeI | CATATG | 1 cut(s) | 1714 |
| NdeII | GATC | 6 cut(s) | 164, 665, 1028, 1053, 1157, 1349 |
| NheI | GCTAGC | 1 cut(s) | 887 |
| NlaIII | CATG | 7 cut(s) | 380, 1253, 1373, 1428, 1465, 1579, 2089 |
| NlaIV | GGNNCC | 5 cut(s) | 157, 679, 754, 1430, 1662 |
| NmuCI | GTSAC | 3 cut(s) | 87, 1004, 1897 |
| NspI | RCATGY | 1 cut(s) | 2089 |
| OliI | CACNNNNGTG | 1 cut(s) | 1680 |
| PagI | TCATGA | 1 cut(s) | 1249 |
| PciI | ACATGT | 1 cut(s) | 2085 |
| PciSI | GCTCTTC | 1 cut(s) | 1111 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1320, 1671 |
| PfeI | GAWTC | 6 cut(s) | 178, 199, 599, 724, 1316, 1909 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 734 |
| PinAI | ACCGGT | 1 cut(s) | 261 |
| PleI | GAGTC | 3 cut(s) | 561, 1653, 2005 |
| PpsI | GAGTC | 3 cut(s) | 561, 1653, 2005 |
| PscI | ACATGT | 1 cut(s) | 2085 |
| PshAI | GACNNNNGTC | 1 cut(s) | 85 |
| Psp124BI | GAGCTC | 1 cut(s) | 2042 |
| Psp6I | CCWGG | 1 cut(s) | 1677 |
| PspFI | CCCAGC | 1 cut(s) | 805 |
| PspGI | CCWGG | 1 cut(s) | 1677 |
| PspN4I | GGNNCC | 5 cut(s) | 157, 679, 754, 1430, 1662 |
| PspPI | GGNCC | 1 cut(s) | 752 |
| PstI | CTGCAG | 1 cut(s) | 10 |
| PstNI | CAGNNNCTG | 1 cut(s) | 97 |
| PsuI | RGATCY | 2 cut(s) | 1028, 1157 |
| PvuII | CAGCTG | 1 cut(s) | 1895 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1512, 1680 |
| SacI | GAGCTC | 1 cut(s) | 2042 |
| SapI | GCTCTTC | 1 cut(s) | 1111 |
| SaqAI | TTAA | 7 cut(s) | 101, 402, 621, 701, 917, 986, 2027 |
| Sau3AI | GATC | 6 cut(s) | 164, 665, 1028, 1053, 1157, 1349 |
| Sau96I | GGNCC | 1 cut(s) | 752 |
| SchI | GAGTC | 3 cut(s) | 561, 1654, 2006 |
| ScrFI | CCNGG | 1 cut(s) | 1679 |
| SduI | GDGCHC | 3 cut(s) | 777, 1295, 2042 |
| SfaNI | GCATC | 6 cut(s) | 115, 264, 810, 1027, 1243, 1879 |
| SfcI | CTRYAG | 1 cut(s) | 6 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1512, 1680 |
| SmlI | CTYRAG | 2 cut(s) | 529, 1225 |
| SmoI | CTYRAG | 2 cut(s) | 529, 1225 |
| Sse9I | AATT | 9 cut(s) | 383, 618, 810, 897, 918, 1257, 1686, 1876, 1965 |
| SsiI | CCGC | 2 cut(s) | 71, 1863 |
| SspI | AATATT | 1 cut(s) | 2023 |
| SspMI | CTAG | 7 cut(s) | 173, 671, 798, 888, 1214, 1953, 2054 |
| SstI | GAGCTC | 1 cut(s) | 2042 |
| StyD4I | CCNGG | 1 cut(s) | 1677 |
| StyI | CCWWGG | 2 cut(s) | 491, 1461 |
| TaaI | ACNGT | 5 cut(s) | 306, 347, 1049, 1473, 1980 |
| TaiI | ACGT | 2 cut(s) | 194, 1904 |
| TaqI | TCGA | 5 cut(s) | 342, 1059, 1139, 1332, 1887 |
| TasI | AATT | 9 cut(s) | 383, 618, 810, 897, 918, 1257, 1686, 1876, 1965 |
| TauI | GCSGC | 1 cut(s) | 74 |
| TfiI | GAWTC | 6 cut(s) | 178, 199, 599, 724, 1316, 1909 |
| Tru1I | TTAA | 7 cut(s) | 101, 402, 621, 701, 917, 986, 2027 |
| Tru9I | TTAA | 7 cut(s) | 101, 402, 621, 701, 917, 986, 2027 |
| TscAI | CASTG | 5 cut(s) | 146, 188, 1186, 1606, 2038 |
| TseFI | GTSAC | 3 cut(s) | 87, 1004, 1897 |
| Tsp45I | GTSAC | 3 cut(s) | 87, 1004, 1897 |
| TspDTI | ATGAA | 7 cut(s) | 365, 378, 540, 1358, 1387, 1505, 1557 |
| TspGWI | ACGGA | 2 cut(s) | 300, 1362 |
| TspRI | CASTG | 5 cut(s) | 146, 188, 1186, 1606, 2038 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 734 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1956 |
| XceI | RCATGY | 1 cut(s) | 2089 |
| XmiI | GTMKAC | 1 cut(s) | 1929 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1320, 1671 |
| XspI | CTAG | 7 cut(s) | 173, 671, 798, 888, 1214, 1953, 2054 |