Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

SuperScaffold_111

Orthogroup ID

OG0009956

Physical Location & Seq

Genomic Coordinates Forward (+)

724221 .. 726264

Gene Structure 2044 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom111g01140.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1899 bp

ATGGCTGCAGCTGCTGCTTCTTCTTCTTCCTTCCTATTTTTCTTCTCACTTCTTACTGTCTCTGCATTTGAACAAAAACCACACAACATTTTAAGCTGCAAGTCCACGTCTCCTGACGCTTCCGGCTACTACTGCAACGTTGCAAATGCATCATCTGTCGGGAACAAGTGTGCAGCTTTTGCGATTCTTCGCACTAACGCTCGTGGTGTTCTTCGTGCCGAGTTGACAAAGACTAGTAGTGTGAAAGGAGAGAGCTTTTACGGCATTGCTGAGTCACTAGCGGGCTTGACGACCTGCAGAGCTATTCGAGAGAACAATCTGGGAGTTTCGCCGTGGGGGCTTGCTGATAAGCTTCAGTTGGTGATCCCCTTGAGATGTGCTTGTCCATCATCATCTCAACTTGTGAAACAACCAAGACTCTTGATTTCATATCCGGTGAGTGGTGGGAAAACGATTTTCGAATTGGCTGTTAAGCTCAATACAACACAAGAAGCTATCATATCTGCAAATAACAGATCATTCGAAAGCCTTAGACCCGAAAGTTTGACACCTATTACATCTCTTTTGATTCCGCTTGAAGGAAAACCTATACTCGGTTCCCTAGCAAAACCCCGGCAACCCAATTTGCGCTTTCCGGCAACTAGCATCCCAGCAATTAGTCTACACAAGAAGAAGGCGAAAATGGACCAGATCGGATTATATGTCGCACTTAGCGGAGCCATTGTTGGAGCCAGCATTGCGATCGCGGCAGCATTCTTGCTACTTAAGATGAAGAAAAAGAAAAGGACTTCACCTAAAGGATGTGATGTGGAGCTGCAACAGCTCAGCCTAAGTGTGAGGACAAGTGACAAGAAAGTCTCGTTTGAAGGATTTCAAGATACTTCTGACGGTCAGATCGTCCAGACCACCACCCCACGAAAGGCGCTGGTGGAGATGTATACAATTGAGGAGCTGAGGAGAGCAACCGAGGACTTCAGTTCGAGCAACCATATCGAGGGATCTGTGTACCACGGCCGCCTAAGCGGGAAGAACTTGGCTGTAAAGCGCACGCAGCCGGACAGCATTTCGAAGATAGAGTTCGGCCTTTTTCATGGTGCAATTCACCACCACCCCAACATAATGAGGCTGTTGGGAACTTGCTTGAGGCCGGAGGGCGAAGAATCGCTTCTGGTTTTCGAGTACGCAAAGAATGGATCTTTGAAGGACTGGCTCCACGGCGGATTGGCAATCAAAAACCAGTTCATTGCGTCATGCTATTGTTTCTTAACGTGGAGCCAAAGGCTGAGGATAAGTCTTGATGTGGCCATGGCATTGCAGTACATGCACCACATTATGAACCCCCCTTATGTCCATCGAAATGTCAAGAGCCGAAACATTTTCCTAGATGAAGAATTCAATGCGAAGATTGGGAATTTCGGCATGGCAAAGTGCGCTGAAAATGAAGCCGAGGATCAAAGCTTCGGGTACATGGCACCCGAATATCTTCAACAGGGTGTGATTTCTCCGAGCATTGACATATTTGCATACGGTGTGGTGTTGCTAGAGGTCTTGTGTGGACAAACGCCAATAAGCAGGCCGGGCGCTAAGGGAGAAGGAAACTTTTACATGTCGGAGAAGATCAAATCCGTGTTGAAGTCAGACAATGCAGAGGAGCTAAGAGAGTGGATGGACAGCGCGTTGGGGGATAATTATTCGTTTGATGCAGCTGTCACATTGGCAAATCTTGCGAGGGCCTGCGTCGACGAAGACCCTAGTTTGAGGCCTAGTGCAGGGGAAGTTGTCGAGAAGTTGTCGCGATTGGTGGAGGAGTCGAAAAGCGTGGAGGGAGAGAATATTTTTATCAGTGAGAGCTCTTGTAAGCCGCTGGTGAAGGCAGCAGCAGCGGCAAACAATAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LysM Pkinase Pkinase_Tyr

Protein Analysis

633

Amino Acids

68.93

Weight (kDa)

8.74

Isoelectric Point (pI)

51.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM2_CERK1_LYK3_4_5	PF23472	74 - 125	5.1e-08	LYK3/4/5 LysM2 domain
Pkinase	PF00069	333 - 595	7.5e-31	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	367 - 597	7.3e-30	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009956)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01840
fragaria_vesca	FvH4_6g53170 FvH4_6g53170 FvH4_6g53170
malus_domestica	MD09G1013400.v1.1 MD17G1014100.v1.1
prunus_persica	Prupe.3G303700_v2.0.a1
pyrus_communis	pycom111g01140
rosa_chinensis	RchiOBHm_Chr2g0175211
rosa_laevigata	RLG00000022311
rosa_multiflora	Rmu_sc0003920.1_g000020 Rmu_sc0010642.1_g000015 Rmu_sc0043138.1_g000001
rosa_roxburghii	Rroxscaffold_2G00077490
rosa_rugosa	Rorug02G0581400 Rorug02G0581500
rosa_samantha	Rh2AG662100 Rh2BG673300 Rh2CG636500 Rh2DG687200
rosa_wichuraiana	Rw2G054300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	854
Acc36I	ACCTGC	1 cut(s)	302
AccB1I	GGYRCC	1 cut(s)	1471
AccI	GTMKAC	3 cut(s)	661, 938, 1740
AccII	CGCG	3 cut(s)	746, 1676, 1795
AciI	CCGC	9 cut(s)	281, 572, 714, 746, 1015, 1023, 1218, 1862, 1883
AclI	AACGTT	1 cut(s)	138
AclWI	GGATC	4 cut(s)	358, 1006, 1201, 1458
AcoI	YGGCCR	2 cut(s)	1012, 1302
AcsI	RAATTY	2 cut(s)	1391, 1411
AcuI	CTGAAG	2 cut(s)	338, 958
AfaI	GTAC	4 cut(s)	1007, 1181, 1319, 1466
AfiI	CCNNNNNNNGG	6 cut(s)	440, 578, 593, 919, 994, 1769
AflII	CTTAAG	1 cut(s)	764
AflIII	ACRYGT	1 cut(s)	1605
AgsI	TTSAA	8 cut(s)	71, 578, 866, 875, 1201, 1396, 1487, 1633
AhlI	ACTAGT	1 cut(s)	233
AjiI	CACGTC	1 cut(s)	108
Alw21I	GWGCWC	1 cut(s)	1853
Alw26I	GTCTC	3 cut(s)	64, 114, 862
AlwI	GGATC	4 cut(s)	358, 1006, 1201, 1458
AlwNI	CAGNNNCTG	1 cut(s)	14
AoxI	GGCC	7 cut(s)	1012, 1081, 1145, 1302, 1574, 1731, 1760
ApoI	RAATTY	2 cut(s)	1391, 1411
AsiSI	GCGATCGC	1 cut(s)	744
Asp700I	GAANNNNTTC	3 cut(s)	870, 1164, 1482
AspLEI	GCGC	6 cut(s)	630, 925, 1047, 1433, 1583, 1676
AspS9I	GGNCC	2 cut(s)	685, 1731
AsuC2I	CCSGG	2 cut(s)	613, 1578
AsuHPI	GGTGA	5 cut(s)	373, 448, 783, 1094, 1879
AsuII	TTCGAA	3 cut(s)	459, 522, 1067
AvaII	GGWCC	1 cut(s)	685
BalI	TGGCCA	1 cut(s)	1304
BanI	GGYRCC	1 cut(s)	1471
BanII	GRGCYC	1 cut(s)	1853
BauI	CACGAG	1 cut(s)	201
BbsI	GAAGAC	1 cut(s)	1752
Bbv12I	GWGCWC	1 cut(s)	1853
BbvCI	CCTCAGC	2 cut(s)	953, 1283
BccI	CCATC	3 cut(s)	394, 1359, 1660
BceAI	ACGGC	4 cut(s)	277, 316, 1027, 1231
BcgI	CGANNNNNNTGC	4 cut(s)	724, 758, 973, 1007
BcnI	CCSGG	2 cut(s)	613, 1578
BcoDI	GTCTC	3 cut(s)	64, 114, 862
BcuI	ACTAGT	1 cut(s)	233
BfaI	CTAG	8 cut(s)	234, 278, 602, 642, 1382, 1541, 1752, 1764
BfmI	CTRYAG	2 cut(s)	6, 295
BfoI	RGCGCY	2 cut(s)	926, 1584
BfrI	CTTAAG	1 cut(s)	764
BfuAI	ACCTGC	1 cut(s)	302
BglI	GCCNNNNNGGC	1 cut(s)	337
BlpI	GCTNAGC	1 cut(s)	824
Bme1390I	CCNGG	2 cut(s)	613, 1578
Bme18I	GGWCC	1 cut(s)	685
BmgBI	CACGTC	1 cut(s)	108
BmgT120I	GGNCC	2 cut(s)	685, 1731
BmiI	GGNNCC	6 cut(s)	598, 718, 730, 1211, 1274, 1473
BmrFI	CCNGG	2 cut(s)	613, 1578
BmsI	GCATC	3 cut(s)	158, 654, 1690
BpiI	GAAGAC	1 cut(s)	1752
Bpu10I	CCTNAGC	4 cut(s)	953, 1019, 1283, 1584
Bpu1102I	GCTNAGC	1 cut(s)	824
Bpu14I	TTCGAA	3 cut(s)	459, 522, 1067
BpuEI	CTTGAG	2 cut(s)	391, 1162
BpuMI	CCSGG	2 cut(s)	613, 1578
BsaJI	CCNNGG	7 cut(s)	332, 611, 966, 1009, 1213, 1305, 1446
BsaWI	WCCGGW	1 cut(s)	433
BsaXI	ACNNNNNCTCC	2 cut(s)	708, 738
Bsc4I	CCNNNNNNNGG	6 cut(s)	440, 578, 593, 919, 994, 1769
Bse1I	ACTGG	2 cut(s)	1211, 1237
Bse3DI	GCAATG	4 cut(s)	264, 735, 1242, 1310
BseDI	CCNNGG	7 cut(s)	332, 611, 966, 1009, 1213, 1305, 1446
BseGI	GGATG	3 cut(s)	645, 806, 1671
BseLI	CCNNNNNNNGG	6 cut(s)	440, 578, 593, 919, 994, 1769
BseMI	GCAATG	4 cut(s)	264, 735, 1242, 1310
BseMII	CTCAG	4 cut(s)	261, 838, 944, 1274
BseNI	ACTGG	2 cut(s)	1211, 1237
BseRI	GAGGAG	4 cut(s)	962, 970, 1664, 1820
BseX3I	CGGCCG	1 cut(s)	1012
BseYI	CCCAGC	1 cut(s)	649
BsgI	GTGCAG	2 cut(s)	192, 1788
Bsh1236I	CGCG	3 cut(s)	746, 1676, 1795
Bsh1285I	CGRYCG	2 cut(s)	744, 1015
BshFI	GGCC	7 cut(s)	1014, 1083, 1147, 1304, 1576, 1733, 1762
BshNI	GGYRCC	1 cut(s)	1471
BsiEI	CGRYCG	2 cut(s)	744, 1015
BsiHKAI	GWGCWC	1 cut(s)	1853
BsiSI	CCGG	7 cut(s)	123, 434, 613, 635, 1055, 1148, 1577
BslI	CCNNNNNNNGG	6 cut(s)	440, 578, 593, 919, 994, 1769
BsmAI	GTCTC	3 cut(s)	64, 114, 862
BsmBI	CGTCTC	1 cut(s)	114
BsmI	GAATGC	1 cut(s)	752
BsnI	GGCC	7 cut(s)	1014, 1083, 1147, 1304, 1576, 1733, 1762
Bsp119I	TTCGAA	3 cut(s)	459, 522, 1067
Bsp1286I	GDGCHC	1 cut(s)	1853
Bsp143I	GATC	9 cut(s)	363, 515, 690, 741, 894, 998, 1193, 1450, 1617
Bsp1720I	GCTNAGC	1 cut(s)	824
Bsp19I	CCATGG	1 cut(s)	1305
Bsp68I	TCGCGA	1 cut(s)	1795
BspACI	CCGC	9 cut(s)	281, 572, 714, 746, 1015, 1023, 1218, 1862, 1883
BspANI	GGCC	7 cut(s)	1014, 1083, 1147, 1304, 1576, 1733, 1762
BspCNI	CTCAG	4 cut(s)	262, 837, 945, 1275
BspFNI	CGCG	3 cut(s)	746, 1676, 1795
BspLI	GGNNCC	6 cut(s)	598, 718, 730, 1211, 1274, 1473
BspMAI	CTGCAG	2 cut(s)	10, 299
BspMI	ACCTGC	1 cut(s)	302
BspPI	GGATC	4 cut(s)	358, 1006, 1201, 1458
BspT104I	TTCGAA	3 cut(s)	459, 522, 1067
BspT107I	GGYRCC	1 cut(s)	1471
BspTI	CTTAAG	1 cut(s)	764
BsrDI	GCAATG	4 cut(s)	264, 735, 1242, 1310
BsrI	ACTGG	2 cut(s)	1211, 1237
BssECI	CCNNGG	7 cut(s)	332, 611, 966, 1009, 1213, 1305, 1446
BssMI	GATC	9 cut(s)	363, 515, 690, 741, 894, 998, 1193, 1450, 1617
BssNAI	GTATAC	1 cut(s)	939
BssSI	CACGAG	1 cut(s)	201
BssT1I	CCWWGG	1 cut(s)	1305
Bst1107I	GTATAC	1 cut(s)	939
Bst2BI	CACGAG	1 cut(s)	201
Bst4CI	ACNGT	3 cut(s)	58, 890, 1529
BstAFI	CTTAAG	1 cut(s)	764
BstAPI	GCANNNNNTGC	4 cut(s)	14, 179, 1321, 1724
BstBI	TTCGAA	3 cut(s)	459, 522, 1067
BstC8I	GCNNGC	6 cut(s)	283, 342, 733, 1049, 1574, 1735
BstDSI	CCRYGG	4 cut(s)	332, 1009, 1213, 1305
BstENI	CCTNNNNNAGG	1 cut(s)	1767
BstF5I	GGATG	3 cut(s)	645, 806, 1671
BstFNI	CGCG	3 cut(s)	746, 1676, 1795
BstH2I	RGCGCY	2 cut(s)	926, 1584
BstHHI	GCGC	6 cut(s)	630, 925, 1047, 1433, 1583, 1676
BstKTI	GATC	9 cut(s)	366, 518, 693, 744, 897, 1001, 1196, 1453, 1620
BstMAI	GTCTC	3 cut(s)	64, 114, 862
BstMBI	GATC	9 cut(s)	363, 515, 690, 741, 894, 998, 1193, 1450, 1617
BstMCI	CGRYCG	2 cut(s)	744, 1015
BstNSI	RCATGY	2 cut(s)	1324, 1609
BstSCI	CCNGG	2 cut(s)	611, 1576
BstSFI	CTRYAG	2 cut(s)	6, 295
BstUI	CGCG	3 cut(s)	746, 1676, 1795
BstV2I	GAAGAC	1 cut(s)	1752
BstX2I	RGATCY	2 cut(s)	998, 1193
BstYI	RGATCY	2 cut(s)	998, 1193
BstZ17I	GTATAC	1 cut(s)	939
BstZI	CGGCCG	1 cut(s)	1012
BsuRI	GGCC	7 cut(s)	1014, 1083, 1147, 1304, 1576, 1733, 1762
BtgI	CCRYGG	4 cut(s)	332, 1009, 1213, 1305
BtrI	CACGTC	1 cut(s)	108
BtsCI	GGATG	3 cut(s)	645, 806, 1671
BtsIMutI	CAGTG	1 cut(s)	1849
BtuMI	TCGCGA	1 cut(s)	1795
BveI	ACCTGC	1 cut(s)	302
Cac8I	GCNNGC	6 cut(s)	283, 342, 733, 1049, 1574, 1735
CaiI	CAGNNNCTG	1 cut(s)	14
CfoI	GCGC	6 cut(s)	630, 925, 1047, 1433, 1583, 1676
Cfr13I	GGNCC	2 cut(s)	685, 1731
CseI	GACGC	3 cut(s)	125, 1236, 1726
Csp6I	GTAC	4 cut(s)	1006, 1180, 1318, 1465
CviAII	CATG	7 cut(s)	1091, 1251, 1306, 1321, 1420, 1468, 1606
CviQI	GTAC	4 cut(s)	1006, 1180, 1318, 1465
DpnI	GATC	9 cut(s)	365, 517, 692, 743, 896, 1000, 1195, 1452, 1619
DpnII	GATC	9 cut(s)	363, 515, 690, 741, 894, 998, 1193, 1450, 1617
DrdI	GACNNNNNNGTC	1 cut(s)	854
DseDI	GACNNNNNNGTC	1 cut(s)	854
EaeI	YGGCCR	2 cut(s)	1012, 1302
EagI	CGGCCG	1 cut(s)	1012
EciI	GGCGGA	1 cut(s)	1233
Ecl136II	GAGCTC	1 cut(s)	1851
EclXI	CGGCCG	1 cut(s)	1012
Eco130I	CCWWGG	1 cut(s)	1305
Eco147I	AGGCCT	1 cut(s)	1762
Eco24I	GRGCYC	1 cut(s)	1853
Eco47I	GGWCC	1 cut(s)	685
Eco52I	CGGCCG	1 cut(s)	1012
Eco53kI	GAGCTC	1 cut(s)	1851
Eco57I	CTGAAG	2 cut(s)	338, 958
EcoICRI	GAGCTC	1 cut(s)	1851
EcoNI	CCTNNNNNAGG	1 cut(s)	1767
EcoO109I	RGGNCCY	1 cut(s)	1731
EcoRI	GAATTC	1 cut(s)	1391
EcoT14I	CCWWGG	1 cut(s)	1305
EcoT22I	ATGCAT	1 cut(s)	151
EcoT38I	GRGCYC	1 cut(s)	1853
ErhI	CCWWGG	1 cut(s)	1305
Esp3I	CGTCTC	1 cut(s)	114
FaeI	CATG	7 cut(s)	1094, 1254, 1309, 1324, 1423, 1471, 1609
FalI	AAGNNNNNCTT	2 cut(s)	1149, 1181
FatI	CATG	7 cut(s)	1090, 1250, 1305, 1320, 1419, 1467, 1605
FauI	CCCGC	2 cut(s)	274, 1016
FblI	GTMKAC	3 cut(s)	661, 938, 1740
FokI	GGATG	3 cut(s)	632, 813, 1678
FriOI	GRGCYC	1 cut(s)	1853
FspBI	CTAG	8 cut(s)	234, 278, 602, 642, 1382, 1541, 1752, 1764
GlaI	GCGC	6 cut(s)	629, 924, 1046, 1432, 1582, 1675
GsaI	CCCAGC	1 cut(s)	653
HaeII	RGCGCY	2 cut(s)	926, 1584
HaeIII	GGCC	7 cut(s)	1014, 1083, 1147, 1304, 1576, 1733, 1762
HapII	CCGG	7 cut(s)	123, 434, 613, 635, 1055, 1148, 1577
HgaI	GACGC	3 cut(s)	125, 1236, 1726
HhaI	GCGC	6 cut(s)	630, 925, 1047, 1433, 1583, 1676
Hin1II	CATG	7 cut(s)	1094, 1254, 1309, 1324, 1423, 1471, 1609
Hin6I	GCGC	6 cut(s)	628, 923, 1045, 1431, 1581, 1674
HinP1I	GCGC	6 cut(s)	628, 923, 1045, 1431, 1581, 1674
HincII	GTYRAC	2 cut(s)	225, 1741
HindII	GTYRAC	2 cut(s)	225, 1741
HindIII	AAGCTT	2 cut(s)	350, 1456
HinfI	GANTC	6 cut(s)	184, 272, 417, 568, 1160, 1808
HpaII	CCGG	7 cut(s)	123, 434, 613, 635, 1055, 1148, 1577
HphI	GGTGA	5 cut(s)	373, 448, 783, 1094, 1879
Hpy166II	GTNNAC	7 cut(s)	105, 225, 662, 939, 1006, 1556, 1741
Hpy188I	TCNGA	6 cut(s)	695, 886, 894, 1506, 1612, 1639
Hpy8I	GTNNAC	7 cut(s)	105, 225, 662, 939, 1006, 1556, 1741
Hpy99I	CGWCG	2 cut(s)	1742, 1745
HpyAV	CCTTC	7 cut(s)	40, 572, 667, 860, 1195, 1586, 1864
HpyCH4III	ACNGT	3 cut(s)	58, 890, 1529
HpyCH4IV	ACGT	3 cut(s)	107, 138, 1268
HpySE526I	ACGT	3 cut(s)	107, 138, 1268
Hsp92II	CATG	7 cut(s)	1094, 1254, 1309, 1324, 1423, 1471, 1609
HspAI	GCGC	6 cut(s)	628, 923, 1045, 1431, 1581, 1674
Kzo9I	GATC	9 cut(s)	363, 515, 690, 741, 894, 998, 1193, 1450, 1617
LmnI	GCTCC	7 cut(s)	716, 728, 811, 949, 1215, 1272, 1651
LweI	GCATC	3 cut(s)	158, 654, 1690
MaeI	CTAG	8 cut(s)	234, 278, 602, 642, 1382, 1541, 1752, 1764
MaeII	ACGT	3 cut(s)	107, 138, 1268
MaeIII	GTNAC	3 cut(s)	273, 845, 1708
MalI	GATC	9 cut(s)	365, 517, 692, 743, 896, 1000, 1195, 1452, 1619
MboI	GATC	9 cut(s)	363, 515, 690, 741, 894, 998, 1193, 1450, 1617
MfeI	CAATTG	1 cut(s)	942
MflI	RGATCY	2 cut(s)	998, 1193
MhlI	GDGCHC	1 cut(s)	1853
MlsI	TGGCCA	1 cut(s)	1304
MluCI	AATT	8 cut(s)	461, 622, 654, 942, 1098, 1391, 1411, 1687
MluNI	TGGCCA	1 cut(s)	1304
MlyI	GAGTC	3 cut(s)	281, 411, 1817
MmeI	TCCRAC	2 cut(s)	706, 1590
Mox20I	TGGCCA	1 cut(s)	1304
Mph1103I	ATGCAT	1 cut(s)	151
MroXI	GAANNNNTTC	3 cut(s)	870, 1164, 1482
MscI	TGGCCA	1 cut(s)	1304
MseI	TTAA	4 cut(s)	92, 471, 765, 1265
MslI	CAYNNNNRTG	1 cut(s)	1356
Msp20I	TGGCCA	1 cut(s)	1304
MspA1I	CMGCKG	4 cut(s)	11, 1706, 1864, 1883
MspCI	CTTAAG	1 cut(s)	764
MspI	CCGG	7 cut(s)	123, 434, 613, 635, 1055, 1148, 1577
MspR9I	CCNGG	2 cut(s)	613, 1578
MunI	CAATTG	1 cut(s)	942
Mva1269I	GAATGC	1 cut(s)	752
MvnI	CGCG	3 cut(s)	746, 1676, 1795
NciI	CCSGG	2 cut(s)	613, 1578
NcoI	CCATGG	1 cut(s)	1305
NdeII	GATC	9 cut(s)	363, 515, 690, 741, 894, 998, 1193, 1450, 1617
NlaIII	CATG	7 cut(s)	1094, 1254, 1309, 1324, 1423, 1471, 1609
NlaIV	GGNNCC	6 cut(s)	598, 718, 730, 1211, 1274, 1473
NmeAIII	GCCGAG	2 cut(s)	244, 1471
NmuCI	GTSAC	3 cut(s)	273, 845, 1708
NruI	TCGCGA	1 cut(s)	1795
NsiI	ATGCAT	1 cut(s)	151
NspI	RCATGY	2 cut(s)	1324, 1609
NspV	TTCGAA	3 cut(s)	459, 522, 1067
PceI	AGGCCT	1 cut(s)	1762
PciI	ACATGT	1 cut(s)	1605
PcsI	WCGNNNNNNNCGW	1 cut(s)	894
PctI	GAATGC	1 cut(s)	752
PdmI	GAANNNNTTC	3 cut(s)	870, 1164, 1482
PfeI	GAWTC	3 cut(s)	184, 568, 1160
Ple19I	CGATCG	1 cut(s)	744
PleI	GAGTC	3 cut(s)	280, 411, 1816
PpsI	GAGTC	3 cut(s)	280, 411, 1816
PscI	ACATGT	1 cut(s)	1605
Psp124BI	GAGCTC	1 cut(s)	1853
Psp1406I	AACGTT	1 cut(s)	138
PspFI	CCCAGC	1 cut(s)	649
PspN4I	GGNNCC	6 cut(s)	598, 718, 730, 1211, 1274, 1473
PspPI	GGNCC	2 cut(s)	685, 1731
PstI	CTGCAG	2 cut(s)	10, 299
PstNI	CAGNNNCTG	1 cut(s)	14
PsuI	RGATCY	2 cut(s)	998, 1193
PvuI	CGATCG	1 cut(s)	744
PvuII	CAGCTG	2 cut(s)	11, 1706
RgaI	GCGATCGC	1 cut(s)	744
RruI	TCGCGA	1 cut(s)	1795
RsaI	GTAC	4 cut(s)	1007, 1181, 1319, 1466
RsaNI	GTAC	4 cut(s)	1006, 1180, 1318, 1465
RseI	CAYNNNNRTG	1 cut(s)	1356
SacI	GAGCTC	1 cut(s)	1853
SalI	GTCGAC	1 cut(s)	1739
SaqAI	TTAA	4 cut(s)	92, 471, 765, 1265
Sau3AI	GATC	9 cut(s)	363, 515, 690, 741, 894, 998, 1193, 1450, 1617
Sau96I	GGNCC	2 cut(s)	685, 1731
SchI	GAGTC	3 cut(s)	281, 411, 1817
ScrFI	CCNGG	2 cut(s)	613, 1578
SduI	GDGCHC	1 cut(s)	1853
SfaAI	GCGATCGC	1 cut(s)	744
SfaNI	GCATC	3 cut(s)	158, 654, 1690
SfcI	CTRYAG	2 cut(s)	6, 295
SfuI	TTCGAA	3 cut(s)	459, 522, 1067
SgfI	GCGATCGC	1 cut(s)	744
SgrDI	CGTCGACG	1 cut(s)	1739
SinI	GGWCC	1 cut(s)	685
SmiMI	CAYNNNNRTG	1 cut(s)	1356
SmlI	CTYRAG	3 cut(s)	370, 764, 1141
SmoI	CTYRAG	3 cut(s)	370, 764, 1141
SpeI	ACTAGT	1 cut(s)	233
Sse9I	AATT	8 cut(s)	461, 622, 654, 942, 1098, 1391, 1411, 1687
SseBI	AGGCCT	1 cut(s)	1762
SsiI	CCGC	9 cut(s)	281, 572, 714, 746, 1015, 1023, 1218, 1862, 1883
SspI	AATATT	1 cut(s)	1834
SspMI	CTAG	8 cut(s)	234, 278, 602, 642, 1382, 1541, 1752, 1764
SstI	GAGCTC	1 cut(s)	1853
StuI	AGGCCT	1 cut(s)	1762
StyD4I	CCNGG	2 cut(s)	611, 1576
StyI	CCWWGG	1 cut(s)	1305
TaaI	ACNGT	3 cut(s)	58, 890, 1529
TaiI	ACGT	3 cut(s)	110, 141, 1271
TasI	AATT	8 cut(s)	461, 622, 654, 942, 1098, 1391, 1411, 1687
TatI	WGTACW	1 cut(s)	1317
TauI	GCSGC	4 cut(s)	749, 1017, 1864, 1886
TfiI	GAWTC	3 cut(s)	184, 568, 1160
Tru1I	TTAA	4 cut(s)	92, 471, 765, 1265
Tru9I	TTAA	4 cut(s)	92, 471, 765, 1265
TscAI	CASTG	1 cut(s)	1849
TseFI	GTSAC	3 cut(s)	273, 845, 1708
Tsp45I	GTSAC	3 cut(s)	273, 845, 1708
TspDTI	ATGAA	7 cut(s)	417, 785, 1079, 1231, 1349, 1401, 1455
TspGWI	ACGGA	1 cut(s)	1615
TspRI	CASTG	1 cut(s)	1849
Vha464I	CTTAAG	1 cut(s)	764
VpaK11BI	GGWCC	1 cut(s)	685
XagI	CCTNNNNNAGG	1 cut(s)	1767
XapI	RAATTY	2 cut(s)	1391, 1411
XceI	RCATGY	2 cut(s)	1324, 1609
XmiI	GTMKAC	3 cut(s)	661, 938, 1740
XmnI	GAANNNNTTC	3 cut(s)	870, 1164, 1482
XspI	CTAG	8 cut(s)	234, 278, 602, 642, 1382, 1541, 1752, 1764
Zsp2I	ATGCAT	1 cut(s)	151

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.