Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0009956

Physical Location & Seq

Genomic Coordinates Forward (+)

1181630 .. 1183968

Gene Structure 2339 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1014100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2070 bp

ATGGCTGCCGCAGCTGCTTCTTCCTTCCTATTTTTCTTCTCGCTTCTAACTGTCTCTGCATTTGAACAAAAACCACACAACATTTTGAGCTGCAAGTCCACGTCTCCCGACGCTTCCGGCTACTACTGCAACGCTACAAATGCATCATCTGTAGAGAACAAGTGTGCAACTTTTGCGATTCTTCGCACCAACGCGTACTACTCCTCTCTCTCCAATCTGAGCTCGTACTTGGGCATCAGTCCGTTTGTGATAGCAGACGCGAACGGATTTTCAGCTGACACGGAGTTTCTTCCTAAAGACGAGCTTTTGTTGATACCGATTGATTGTAAGTACGGCAATGGTGGTGTTTTTTGTGCCGAGTTGACAAGGACTAGTGTGAAAGGTGAGAGCTTTTATGGCATTGCTCAGTCACTAGAGGGCTTGACAACCTGCAGAGCTATTCGAGAGAGGAATCCAGGCGTTTCGCCATGGGGGCTTGCTGATAAGCTTCAGTTGGTGATCCCCTTGAGATGTGCTTGTCCTTCTTCATCATCTCGACTTGTGACACGATCAAGACTCTTGATTTCATATCCTGTGAGTGAAGGCGACACGATTTCTGATTTGGCTGTTAAGTTCAATACAACACAAGAAGCTATCATATCTGCAAATAACAGATCATTCAAAAGCGTTAGACCCGAAAGTTTGACACCTCTTACATCTCTTCTGATTCCGCTTGAAGGAAAACCTATACTCGGTCCCCTAGGAAAACCCCGGGAACCCAATTTGCGCTTTCCAGCAGCTAGCATCCCTGCAGTTAGTCCCCACAAGAAGAAGGCGAAAATGAACCAGATTGGATTGTATGTCGCGCTTAGCGGAGTCGTTGTTGGAGCCAGCATTGCGGTCGCGGCAGCATTCTTGCTATTTCAGATGAAGAAAAAGAAAAAGACTTCACCAAAAGGATGTGATGTGGATCTGCAACAGCTCAGCCTAAGTGTGAGGACAACAAGTGACAAAAAAGTCTCGTTTGAGGGATCACAAGCTACTTTTGACGGTCAGATCATCGAGACAACCACGCCGCGAAAGGTTCTGGTGGAGATGTATACAATTGAGGAGCTGAGCAGAGCAACCGAGGACTTCAGTTCCGGCAACCACATTGAAGGATCTGTGTACCATGGCCGCCTAAGCGGGAAGAACTTGGCAGTAAAGCGCATACAGCCAGATACAATTTCGAAGATTGAGTTTGGTCTTTTTCATGATGCCATTCATCATCACCCCAACATAATGAGGCTGTTGGGAACTTGCTTGAGGCCAGAGGGGCAAGAATCGTTTCTGGTTTTCGAGTATGCGAATAATGGATCTTTGAAGGACTGGCTCCATGGCGGATTGGCAATCAAAAACCAGTTCATTGCGTCGTGCTATTGTTTCTTGACGTGGAGCCAAAGGCTGAGGATATGTCTTGACGTAGCCATGGCATTGCAGTACATGCACCACATTATGAACCCCCTTTATGTCCATCGTAATTTAAAGAGCCGAAACATTTTCCTCGACGAAGAATTCAACGCAAAGATTGGGAATTTCGGCATGGCAAAGTGTGCTGAAAATGACTCCGACGATCAACATTGTAGTCCAACCAGCCCTGCCGCGTCTTGGAGCCTGGGTTACATGGCACCCGAATATGTTCACCAGGGTGTGATTTCTCCAAGCATTGATATTTTCGCATATGGCATCGTGTTGCTAGAGGTCTTGTGTGGACAAACGCCAATAAGCAGGCCGGGCGCTGATGGAGAAGAAAACTTTTACCTCTCAGAGAAGATCAAATCCGTGTTGCATTTGGACAATGCAGAGGAGTTAAGAGAGTGGATGGACAGCGCGTTGGGGGATAACTATTCGTTCGACGCAGCTGTCACACTGGCAAATCTAGCCAGGGCCTGCGTCGACGAAGACCCTAGTTTGAGGCCTAGTGCAGGGGAAGTTGTCCACAAGTTGTCGCGATTGGTGGAGGAGTCGAAAAGCGTGGAGGGGGAGAATATTTTGATCAGTGAGAGCTCTTGTAAGCCGCTGGTGAAGGCGGCGGCGGCAAACAATGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LysM Pkinase Pkinase_Tyr

Protein Analysis

690

Amino Acids

75.23

Weight (kDa)

6.48

Isoelectric Point (pI)

47.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM1_NFP_LYK	PF23446	55 - 110	7.4e-10	NFP/LYK LysM1 domain
LysM2_CERK1_LYK3_4_5	PF23472	120 - 170	9.1e-10	LYK3/4/5 LysM2 domain
LysM3_LYK4_5	PF23473	187 - 238	6e-08	LYK4/5 LysM3 domain
Pkinase	PF00069	380 - 653	2.5e-32	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	380 - 655	1.8e-31	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009956)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01840
fragaria_vesca	FvH4_6g53170 FvH4_6g53170 FvH4_6g53170
malus_domestica	MD09G1013400.v1.1 MD17G1014100.v1.1
prunus_persica	Prupe.3G303700_v2.0.a1
pyrus_communis	pycom111g01140
rosa_chinensis	RchiOBHm_Chr2g0175211
rosa_laevigata	RLG00000022311
rosa_multiflora	Rmu_sc0003920.1_g000020 Rmu_sc0010642.1_g000015 Rmu_sc0043138.1_g000001
rosa_roxburghii	Rroxscaffold_2G00077490
rosa_rugosa	Rorug02G0581400 Rorug02G0581500
rosa_samantha	Rh2AG662100 Rh2BG673300 Rh2CG636500 Rh2DG687200
rosa_wichuraiana	Rw2G054300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	995, 1880
Acc36I	ACCTGC	1 cut(s)	437
AccB1I	GGYRCC	1 cut(s)	1645
AccI	GTMKAC	2 cut(s)	1079, 1914
AccII	CGCG	8 cut(s)	194, 260, 845, 884, 1057, 1622, 1850, 1969
AclWI	GGATC	5 cut(s)	493, 957, 1018, 1147, 1342
AcoI	YGGCCR	1 cut(s)	1153
AcsI	RAATTY	2 cut(s)	1532, 1552
AcuI	CTGAAG	2 cut(s)	473, 1099
AfaI	GTAC	5 cut(s)	197, 227, 332, 1148, 1460
AfiI	CCNNNNNNNGG	4 cut(s)	716, 731, 1626, 1943
AflIII	ACRYGT	1 cut(s)	192
AgsI	TTSAA	7 cut(s)	65, 616, 661, 716, 1136, 1342, 1537
AhlI	ACTAGT	1 cut(s)	371
AjiI	CACGTC	2 cut(s)	102, 1410
AjnI	CCWGG	4 cut(s)	454, 1632, 1662, 1901
AleI	CACNNNNGTG	1 cut(s)	1665
Alw21I	GWGCWC	2 cut(s)	224, 2027
Alw26I	GTCTC	4 cut(s)	58, 108, 1003, 1037
AlwI	GGATC	5 cut(s)	493, 957, 1018, 1147, 1342
AlwNI	CAGNNNCTG	1 cut(s)	1908
Ama87I	CYCGRG	1 cut(s)	750
AoxI	GGCC	5 cut(s)	1153, 1286, 1748, 1905, 1934
ApeKI	GCWGC	7 cut(s)	5, 11, 14, 90, 776, 887, 1877
ApoI	RAATTY	2 cut(s)	1532, 1552
Asp700I	GAANNNNTTC	2 cut(s)	1305, 1656
AspA2I	CCTAGG	1 cut(s)	739
AspLEI	GCGC	5 cut(s)	768, 847, 1188, 1757, 1850
AspS9I	GGNCC	2 cut(s)	734, 1905
AsuC2I	CCSGG	3 cut(s)	751, 752, 1752
AsuHPI	GGTGA	6 cut(s)	395, 508, 921, 1241, 1652, 2053
AsuII	TTCGAA	1 cut(s)	1208
AsuNHI	GCTAGC	1 cut(s)	779
AvaI	CYCGRG	1 cut(s)	750
AvaII	GGWCC	1 cut(s)	734
AvrII	CCTAGG	1 cut(s)	739
BanI	GGYRCC	1 cut(s)	1645
BanII	GRGCYC	2 cut(s)	224, 2027
BbsI	GAAGAC	1 cut(s)	1926
Bbv12I	GWGCWC	2 cut(s)	224, 2027
BbvCI	CCTCAGC	1 cut(s)	1424
BbvI	GCAGC	5 cut(s)	23, 77, 788, 899, 1889
BccI	CCATC	3 cut(s)	1500, 1754, 1834
BceAI	ACGGC	1 cut(s)	349
BcgI	CGANNNNNNTGC	2 cut(s)	862, 896
BciT130I	CCWGG	4 cut(s)	456, 1634, 1664, 1903
BclI	TGATCA	1 cut(s)	2013
BcnI	CCSGG	3 cut(s)	751, 752, 1752
BcoDI	GTCTC	4 cut(s)	58, 108, 1003, 1037
BcuI	ACTAGT	1 cut(s)	371
BfaI	CTAG	8 cut(s)	372, 413, 740, 780, 1715, 1898, 1926, 1938
BfmI	CTRYAG	3 cut(s)	150, 430, 789
BfoI	RGCGCY	1 cut(s)	1758
BfuAI	ACCTGC	1 cut(s)	437
BglI	GCCNNNNNGGC	2 cut(s)	472, 1294
BlnI	CCTAGG	1 cut(s)	739
BlpI	GCTNAGC	3 cut(s)	848, 962, 1094
Bme1390I	CCNGG	7 cut(s)	456, 751, 752, 1634, 1664, 1752, 1903
Bme18I	GGWCC	1 cut(s)	734
BmeT110I	CYCGRG	1 cut(s)	750
BmgBI	CACGTC	2 cut(s)	102, 1410
BmgT120I	GGNCC	2 cut(s)	734, 1905
BmiI	GGNNCC	7 cut(s)	736, 756, 868, 1352, 1415, 1631, 1647
BmrFI	CCNGG	7 cut(s)	456, 751, 752, 1634, 1664, 1752, 1903
BmsI	GCATC	5 cut(s)	152, 243, 792, 1225, 1713
BmtI	GCTAGC	1 cut(s)	783
BpiI	GAAGAC	1 cut(s)	1926
Bpu10I	CCTNAGC	2 cut(s)	1160, 1424
Bpu1102I	GCTNAGC	3 cut(s)	848, 962, 1094
Bpu14I	TTCGAA	1 cut(s)	1208
BpuEI	CTTGAG	2 cut(s)	526, 1303
BpuMI	CCSGG	3 cut(s)	751, 752, 1752
BsaBI	GATNNNNATC	1 cut(s)	948
BsaXI	ACNNNNNCTCC	4 cut(s)	846, 876, 1621, 1651
Bsc4I	CCNNNNNNNGG	4 cut(s)	716, 731, 1626, 1943
Bse1I	ACTGG	3 cut(s)	1352, 1378, 1893
Bse3DI	GCAATG	5 cut(s)	343, 399, 873, 1383, 1451
Bse8I	GATNNNNATC	1 cut(s)	948
BseBI	CCWGG	4 cut(s)	456, 1634, 1664, 1903
BseGI	GGATG	3 cut(s)	783, 944, 1845
BseJI	GATNNNNATC	1 cut(s)	948
BseLI	CCNNNNNNNGG	4 cut(s)	716, 731, 1626, 1943
BseMI	GCAATG	5 cut(s)	343, 399, 873, 1383, 1451
BseMII	CTCAG	6 cut(s)	209, 419, 976, 1085, 1415, 1797
BseNI	ACTGG	3 cut(s)	1352, 1378, 1893
BseRI	GAGGAG	4 cut(s)	193, 1103, 1838, 1994
BseXI	GCAGC	5 cut(s)	23, 77, 788, 899, 1889
BsgI	GTGCAG	1 cut(s)	1962
Bsh1236I	CGCG	8 cut(s)	194, 260, 845, 884, 1057, 1622, 1850, 1969
Bsh1285I	CGRYCG	1 cut(s)	882
BshFI	GGCC	5 cut(s)	1155, 1288, 1750, 1907, 1936
BshNI	GGYRCC	1 cut(s)	1645
BsiEI	CGRYCG	1 cut(s)	882
BsiHKAI	GWGCWC	2 cut(s)	224, 2027
BsiHKCI	CYCGRG	1 cut(s)	750
BsiSI	CCGG	4 cut(s)	117, 751, 1122, 1751
BslFI	GGGAC	2 cut(s)	720, 783
BslI	CCNNNNNNNGG	4 cut(s)	716, 731, 1626, 1943
BsmAI	GTCTC	4 cut(s)	58, 108, 1003, 1037
BsmBI	CGTCTC	1 cut(s)	108
BsmFI	GGGAC	2 cut(s)	720, 783
BsmI	GAATGC	1 cut(s)	890
BsnI	GGCC	5 cut(s)	1155, 1288, 1750, 1907, 1936
BsoBI	CYCGRG	1 cut(s)	750
Bsp119I	TTCGAA	1 cut(s)	1208
Bsp1286I	GDGCHC	2 cut(s)	224, 2027
Bsp1720I	GCTNAGC	3 cut(s)	848, 962, 1094
Bsp19I	CCATGG	4 cut(s)	467, 1150, 1354, 1446
Bsp68I	TCGCGA	1 cut(s)	1969
BspANI	GGCC	5 cut(s)	1155, 1288, 1750, 1907, 1936
BspCNI	CTCAG	6 cut(s)	210, 418, 975, 1086, 1416, 1796
BspFNI	CGCG	8 cut(s)	194, 260, 845, 884, 1057, 1622, 1850, 1969
BspHI	TCATGA	1 cut(s)	1231
BspLI	GGNNCC	7 cut(s)	736, 756, 868, 1352, 1415, 1631, 1647
BspMAI	CTGCAG	2 cut(s)	434, 793
BspMI	ACCTGC	1 cut(s)	437
BspOI	GCTAGC	1 cut(s)	783
BspPI	GGATC	5 cut(s)	493, 957, 1018, 1147, 1342
BspT104I	TTCGAA	1 cut(s)	1208
BspT107I	GGYRCC	1 cut(s)	1645
BsrDI	GCAATG	5 cut(s)	343, 399, 873, 1383, 1451
BsrI	ACTGG	3 cut(s)	1352, 1378, 1893
BssNAI	GTATAC	1 cut(s)	1080
BssT1I	CCWWGG	5 cut(s)	467, 739, 1150, 1354, 1446
Bst1107I	GTATAC	1 cut(s)	1080
Bst2UI	CCWGG	4 cut(s)	456, 1634, 1664, 1903
Bst4CI	ACNGT	2 cut(s)	52, 1031
Bst6I	CTCTTC	1 cut(s)	705
BstAPI	GCANNNNNTGC	3 cut(s)	173, 1462, 1571
BstBI	TTCGAA	1 cut(s)	1208
BstC8I	GCNNGC	5 cut(s)	477, 781, 871, 1748, 1909
BstDEI	CTNAG	9 cut(s)	218, 405, 848, 962, 968, 1094, 1160, 1424, 1783
BstDSI	CCRYGG	4 cut(s)	467, 1150, 1354, 1446
BstENI	CCTNNNNNAGG	1 cut(s)	1941
BstF5I	GGATG	3 cut(s)	783, 944, 1845
BstFNI	CGCG	8 cut(s)	194, 260, 845, 884, 1057, 1622, 1850, 1969
BstH2I	RGCGCY	1 cut(s)	1758
BstHHI	GCGC	5 cut(s)	768, 847, 1188, 1757, 1850
BstMAI	GTCTC	4 cut(s)	58, 108, 1003, 1037
BstMCI	CGRYCG	1 cut(s)	882
BstNI	CCWGG	4 cut(s)	456, 1634, 1664, 1903
BstNSI	RCATGY	1 cut(s)	1465
BstSCI	CCNGG	7 cut(s)	454, 749, 750, 1632, 1662, 1750, 1901
BstSFI	CTRYAG	3 cut(s)	150, 430, 789
BstUI	CGCG	8 cut(s)	194, 260, 845, 884, 1057, 1622, 1850, 1969
BstV1I	GCAGC	5 cut(s)	23, 77, 788, 899, 1889
BstV2I	GAAGAC	1 cut(s)	1926
BstX2I	RGATCY	3 cut(s)	949, 1139, 1334
BstYI	RGATCY	3 cut(s)	949, 1139, 1334
BstZ17I	GTATAC	1 cut(s)	1080
BsuRI	GGCC	5 cut(s)	1155, 1288, 1750, 1907, 1936
BtgI	CCRYGG	4 cut(s)	467, 1150, 1354, 1446
BtrI	CACGTC	2 cut(s)	102, 1410
BtsCI	GGATG	3 cut(s)	783, 944, 1845
BtsIMutI	CAGTG	2 cut(s)	1886, 2023
BtuMI	TCGCGA	1 cut(s)	1969
BveI	ACCTGC	1 cut(s)	437
Cac8I	GCNNGC	5 cut(s)	477, 781, 871, 1748, 1909
CaiI	CAGNNNCTG	1 cut(s)	1908
CciI	TCATGA	1 cut(s)	1231
CfoI	GCGC	5 cut(s)	768, 847, 1188, 1757, 1850
Cfr13I	GGNCC	2 cut(s)	734, 1905
Cfr9I	CCCGGG	1 cut(s)	750
CseI	GACGC	6 cut(s)	119, 266, 1377, 1611, 1883, 1900
Csp6I	GTAC	5 cut(s)	196, 226, 331, 1147, 1459
CviAII	CATG	8 cut(s)	468, 1151, 1232, 1355, 1447, 1462, 1561, 1642
CviQI	GTAC	5 cut(s)	196, 226, 331, 1147, 1459
DdeI	CTNAG	9 cut(s)	218, 405, 848, 962, 968, 1094, 1160, 1424, 1783
DraI	TTTAAA	1 cut(s)	1503
DrdI	GACNNNNNNGTC	2 cut(s)	995, 1880
DseDI	GACNNNNNNGTC	2 cut(s)	995, 1880
EaeI	YGGCCR	1 cut(s)	1153
Eam1104I	CTCTTC	1 cut(s)	705
EarI	CTCTTC	1 cut(s)	705
EciI	GGCGGA	1 cut(s)	1374
Ecl136II	GAGCTC	2 cut(s)	222, 2025
Eco130I	CCWWGG	5 cut(s)	467, 739, 1150, 1354, 1446
Eco147I	AGGCCT	1 cut(s)	1936
Eco24I	GRGCYC	2 cut(s)	224, 2027
Eco47I	GGWCC	1 cut(s)	734
Eco53kI	GAGCTC	2 cut(s)	222, 2025
Eco57I	CTGAAG	2 cut(s)	473, 1099
Eco88I	CYCGRG	1 cut(s)	750
EcoICRI	GAGCTC	2 cut(s)	222, 2025
EcoNI	CCTNNNNNAGG	1 cut(s)	1941
EcoO109I	RGGNCCY	1 cut(s)	1905
EcoRI	GAATTC	1 cut(s)	1532
EcoRII	CCWGG	4 cut(s)	454, 1632, 1662, 1901
EcoT14I	CCWWGG	5 cut(s)	467, 739, 1150, 1354, 1446
EcoT22I	ATGCAT	1 cut(s)	145
EcoT38I	GRGCYC	2 cut(s)	224, 2027
ErhI	CCWWGG	5 cut(s)	467, 739, 1150, 1354, 1446
Esp3I	CGTCTC	1 cut(s)	108
FaeI	CATG	8 cut(s)	471, 1154, 1235, 1358, 1450, 1465, 1564, 1645
FalI	AAGNNNNNCTT	2 cut(s)	288, 320
FaqI	GGGAC	2 cut(s)	720, 783
FatI	CATG	8 cut(s)	467, 1150, 1231, 1354, 1446, 1461, 1560, 1641
FauI	CCCGC	1 cut(s)	1157
FauNDI	CATATG	1 cut(s)	1699
FbaI	TGATCA	1 cut(s)	2013
FblI	GTMKAC	2 cut(s)	1079, 1914
FokI	GGATG	3 cut(s)	770, 951, 1852
FriOI	GRGCYC	2 cut(s)	224, 2027
FspBI	CTAG	8 cut(s)	372, 413, 740, 780, 1715, 1898, 1926, 1938
GlaI	GCGC	5 cut(s)	767, 846, 1187, 1756, 1849
HaeII	RGCGCY	1 cut(s)	1758
HaeIII	GGCC	5 cut(s)	1155, 1288, 1750, 1907, 1936
HapII	CCGG	4 cut(s)	117, 751, 1122, 1751
HgaI	GACGC	6 cut(s)	119, 266, 1377, 1611, 1883, 1900
HhaI	GCGC	5 cut(s)	768, 847, 1188, 1757, 1850
Hin1II	CATG	8 cut(s)	471, 1154, 1235, 1358, 1450, 1465, 1564, 1645
Hin6I	GCGC	5 cut(s)	766, 845, 1186, 1755, 1848
HinP1I	GCGC	5 cut(s)	766, 845, 1186, 1755, 1848
HincII	GTYRAC	2 cut(s)	363, 1915
HindII	GTYRAC	2 cut(s)	363, 1915
HindIII	AAGCTT	1 cut(s)	485
HinfI	GANTC	8 cut(s)	178, 451, 555, 706, 855, 1301, 1583, 1982
HpaII	CCGG	4 cut(s)	117, 751, 1122, 1751
HphI	GGTGA	6 cut(s)	395, 508, 921, 1241, 1652, 2053
Hpy166II	GTNNAC	8 cut(s)	99, 363, 1080, 1147, 1660, 1730, 1915, 1957
Hpy188I	TCNGA	7 cut(s)	219, 598, 705, 906, 1035, 1588, 1786
Hpy8I	GTNNAC	8 cut(s)	99, 363, 1080, 1147, 1660, 1730, 1915, 1957
Hpy99I	CGWCG	7 cut(s)	113, 1393, 1529, 1592, 1877, 1916, 1919
HpyAV	CCTTC	8 cut(s)	34, 531, 575, 710, 805, 1130, 1336, 2038
HpyCH4III	ACNGT	2 cut(s)	52, 1031
HpyCH4IV	ACGT	3 cut(s)	101, 1409, 1440
HpyF3I	CTNAG	9 cut(s)	218, 405, 848, 962, 968, 1094, 1160, 1424, 1783
HpySE526I	ACGT	3 cut(s)	101, 1409, 1440
Hsp92II	CATG	8 cut(s)	471, 1154, 1235, 1358, 1450, 1465, 1564, 1645
HspAI	GCGC	5 cut(s)	766, 845, 1186, 1755, 1848
Ksp22I	TGATCA	1 cut(s)	2013
LmnI	GCTCC	5 cut(s)	866, 1090, 1356, 1413, 1629
Lsp1109I	GCAGC	5 cut(s)	23, 77, 788, 899, 1889
LweI	GCATC	5 cut(s)	152, 243, 792, 1225, 1713
MaeI	CTAG	8 cut(s)	372, 413, 740, 780, 1715, 1898, 1926, 1938
MaeII	ACGT	3 cut(s)	101, 1409, 1440
MaeIII	GTNAC	5 cut(s)	408, 541, 986, 1637, 1882
MfeI	CAATTG	1 cut(s)	1083
MflI	RGATCY	3 cut(s)	949, 1139, 1334
MhlI	GDGCHC	2 cut(s)	224, 2027
MluCI	AATT	6 cut(s)	760, 1083, 1203, 1498, 1532, 1552
MluI	ACGCGT	1 cut(s)	192
MlyI	GAGTC	4 cut(s)	549, 864, 1577, 1991
MmeI	TCCRAC	3 cut(s)	844, 1611, 1631
Mph1103I	ATGCAT	1 cut(s)	145
MroXI	GAANNNNTTC	2 cut(s)	1305, 1656
MseI	TTAA	3 cut(s)	609, 1502, 1829
MslI	CAYNNNNRTG	1 cut(s)	1665
MspA1I	CMGCKG	4 cut(s)	14, 275, 1880, 2038
MspI	CCGG	4 cut(s)	117, 751, 1122, 1751
MspR9I	CCNGG	7 cut(s)	456, 751, 752, 1634, 1664, 1752, 1903
MunI	CAATTG	1 cut(s)	1083
Mva1269I	GAATGC	1 cut(s)	890
MvaI	CCWGG	4 cut(s)	456, 1634, 1664, 1903
MvnI	CGCG	8 cut(s)	194, 260, 845, 884, 1057, 1622, 1850, 1969
NciI	CCSGG	3 cut(s)	751, 752, 1752
NcoI	CCATGG	4 cut(s)	467, 1150, 1354, 1446
NdeI	CATATG	1 cut(s)	1699
NheI	GCTAGC	1 cut(s)	779
NlaIII	CATG	8 cut(s)	471, 1154, 1235, 1358, 1450, 1465, 1564, 1645
NlaIV	GGNNCC	7 cut(s)	736, 756, 868, 1352, 1415, 1631, 1647
NmeAIII	GCCGAG	1 cut(s)	382
NmuCI	GTSAC	4 cut(s)	408, 541, 986, 1882
NruI	TCGCGA	1 cut(s)	1969
NsiI	ATGCAT	1 cut(s)	145
NspI	RCATGY	1 cut(s)	1465
NspV	TTCGAA	1 cut(s)	1208
OliI	CACNNNNGTG	1 cut(s)	1665
PagI	TCATGA	1 cut(s)	1231
PceI	AGGCCT	1 cut(s)	1936
PctI	GAATGC	1 cut(s)	890
PdmI	GAANNNNTTC	2 cut(s)	1305, 1656
PfeI	GAWTC	4 cut(s)	178, 451, 706, 1301
PleI	GAGTC	4 cut(s)	549, 863, 1577, 1990
PpsI	GAGTC	4 cut(s)	549, 863, 1577, 1990
Psp124BI	GAGCTC	2 cut(s)	224, 2027
Psp6I	CCWGG	4 cut(s)	454, 1632, 1662, 1901
PspGI	CCWGG	4 cut(s)	454, 1632, 1662, 1901
PspN4I	GGNNCC	7 cut(s)	736, 756, 868, 1352, 1415, 1631, 1647
PspPI	GGNCC	2 cut(s)	734, 1905
PstI	CTGCAG	2 cut(s)	434, 793
PstNI	CAGNNNCTG	1 cut(s)	1908
PsuI	RGATCY	3 cut(s)	949, 1139, 1334
PvuII	CAGCTG	3 cut(s)	14, 275, 1880
RruI	TCGCGA	1 cut(s)	1969
RsaI	GTAC	5 cut(s)	197, 227, 332, 1148, 1460
RsaNI	GTAC	5 cut(s)	196, 226, 331, 1147, 1459
RseI	CAYNNNNRTG	1 cut(s)	1665
SacI	GAGCTC	2 cut(s)	224, 2027
SalI	GTCGAC	1 cut(s)	1913
SaqAI	TTAA	3 cut(s)	609, 1502, 1829
Sau96I	GGNCC	2 cut(s)	734, 1905
SchI	GAGTC	4 cut(s)	549, 864, 1577, 1991
ScrFI	CCNGG	7 cut(s)	456, 751, 752, 1634, 1664, 1752, 1903
SduI	GDGCHC	2 cut(s)	224, 2027
SfaNI	GCATC	5 cut(s)	152, 243, 792, 1225, 1713
SfcI	CTRYAG	3 cut(s)	150, 430, 789
SfuI	TTCGAA	1 cut(s)	1208
SgrDI	CGTCGACG	1 cut(s)	1913
SinI	GGWCC	1 cut(s)	734
SmaI	CCCGGG	1 cut(s)	752
SmiMI	CAYNNNNRTG	1 cut(s)	1665
SmlI	CTYRAG	2 cut(s)	505, 1282
SmoI	CTYRAG	2 cut(s)	505, 1282
SpeI	ACTAGT	1 cut(s)	371
Sse9I	AATT	6 cut(s)	760, 1083, 1203, 1498, 1532, 1552
SseBI	AGGCCT	1 cut(s)	1936
SspI	AATATT	1 cut(s)	2008
SspMI	CTAG	8 cut(s)	372, 413, 740, 780, 1715, 1898, 1926, 1938
SstI	GAGCTC	2 cut(s)	224, 2027
StuI	AGGCCT	1 cut(s)	1936
StyD4I	CCNGG	7 cut(s)	454, 749, 750, 1632, 1662, 1750, 1901
StyI	CCWWGG	5 cut(s)	467, 739, 1150, 1354, 1446
TaaI	ACNGT	2 cut(s)	52, 1031
TaiI	ACGT	3 cut(s)	104, 1412, 1443
TaqI	TCGA	9 cut(s)	442, 535, 1041, 1208, 1317, 1524, 1872, 1914, 1985
TaqII	GACCGA	1 cut(s)	722
TasI	AATT	6 cut(s)	760, 1083, 1203, 1498, 1532, 1552
TatI	WGTACW	1 cut(s)	1458
TauI	GCSGC	9 cut(s)	11, 887, 1057, 1158, 1622, 2038, 2051, 2054, 2057
TfiI	GAWTC	4 cut(s)	178, 451, 706, 1301
Tru1I	TTAA	3 cut(s)	609, 1502, 1829
Tru9I	TTAA	3 cut(s)	609, 1502, 1829
TscAI	CASTG	2 cut(s)	1893, 2023
TseFI	GTSAC	4 cut(s)	408, 541, 986, 1882
TseI	GCWGC	7 cut(s)	5, 11, 14, 90, 776, 887, 1877
Tsp45I	GTSAC	4 cut(s)	408, 541, 986, 1882
TspDTI	ATGAA	8 cut(s)	516, 555, 836, 923, 1220, 1232, 1372, 1490
TspGWI	ACGGA	4 cut(s)	231, 279, 296, 1789
TspMI	CCCGGG	1 cut(s)	750
TspRI	CASTG	2 cut(s)	1893, 2023
VpaK11BI	GGWCC	1 cut(s)	734
XagI	CCTNNNNNAGG	1 cut(s)	1941
XapI	RAATTY	2 cut(s)	1532, 1552
XceI	RCATGY	1 cut(s)	1465
XmaI	CCCGGG	1 cut(s)	750
XmaJI	CCTAGG	1 cut(s)	739
XmiI	GTMKAC	2 cut(s)	1079, 1914
XmnI	GAANNNNTTC	2 cut(s)	1305, 1656
XspI	CTAG	8 cut(s)	372, 413, 740, 780, 1715, 1898, 1926, 1938
Zsp2I	ATGCAT	1 cut(s)	145

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.