Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0009956

Physical Location & Seq

Genomic Coordinates Reverse (-)

39031995 .. 39034683

Gene Structure 2689 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g53170.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1785 bp

ATGGATCATCATCATCTTCACTCAACCAAAGCAAATGGCTTTTCAGCGCACACGGAGTTTCTTCCTAAAGACCAGCCTTTGTTGATACCGATTGATTGCAAATGCAGCAATGGGGGCTTGTTTCAAGCGCAGTTGACAAAAACAACCATCAGAGGTGAGAGCTTTTATGGCATTGCTGAAGCGCTAGAGGGTTTGACAACTTGCAAAGACATCCGAGAGAAGAACCCGGGTGTCTCGCCTTGGGAACTTGCTGATAAAGTTGAGTTACACATTCCCTTGAGATGTGCTTGTCCCTCTAAATCATCTCAGTCAAGACTCTTGCTTTCTTACCCAGTAAAACAAGGTGACACCATTTCTTCTTTGGCCATTCAATTCAATACCACTCAAGAAGCTATCATATCTGCAAATAATAGATCAACATTTAGACCTGAAAGCAGTTTAGTACCACTTACATCTCTTCTGATTCCACTCAATGCTAAACCGATACTTGGTCCTCTAGAAAAGCCCCGCGAACCCAATTTGCGTTTTCCAGCAACTAGCGTCCCAGCAATTAGTCCACACAGGAAGAAAGCAAAAATGCATAAGGCTGGACTATATGTCGCGATCATTGTGGTGGTTGTTGTAGCTAGCATTGCCATTGCTGCGGCTTTGTTGGTGATTCAGCTGAGGAAGAAGAAACAGATCATTTCATCCAAAGGAGTCGTTGATTTGGAACTGCAACAGCTTAGCCTAAGCATCAGAACCACAAGTGACAAGAAGGTCTCATTTGAGGGATCACAGGACACATTAGATGGTCACACTGTTGAAGCCACCACGCCGCGCAAGGTGCTGGTGGAGACATACACCATGGAGGAGCTGAAAAGAGCAACAGAAGACTTCAGTTCGAGCAACCACATCGAAGGGTCTGTGTACCACGGCCGTCTCAGTGGCAACAACTTGGCAATAAAGCCCACACAACATGACATCATCTCAAGGATCGAGTTTGGGCTTTTCCATGATGCAATTCACCACCATCCGAACATAATGAGGCTGTTGGGGACATGTTTGACTGAAGGTCAAGACTCATTTCTGGTTTTCGAGTATGCAAAGAACGGATCATTGAAAGACTGGCTTCACGGTGGATTGGCAATTAAAAACCAGTTCATTGCCTCATGTGATTGTTTCTTGACGTGGAGCCAAAGGCTGAGGATATGTCTTGATGTGGCCATGGCATTACAGTACATGCACCACATAATGAACCCAAGTTATGTGCATCGCAATGTGAAGAGCCGAAACATCTTCTTGGATGAAGAATTCAATGCCAAGATTGGAAACTTTGGAATGGCAAAGTGTGTTGAAAATGACACGGAAAATTTGGCTCCTGAATATGTTCACCAAGGTGTGGTTTCTCCAAGCACTGATATATTTGCTTATGGAATAGTGTTGTTGGAGGTCTTGTGTGGGCAAAAGGCATTAACCAAGCCTAGTGAAATGGGGCAGGGGAAACATTTCTGGCTCTCGGAGAAAATCAAATCCATATTGCAGTCAGACAATGCAGATGAGCTGAGGGAATGGATGGACAGCGCATTGGGCGAGAATTATTCTTTCGATGCAGCTCTCACATTAGCCAATCTTGCGAGTGCTTGTGTAAATGAAGATCCTTGTTTGAGACCAAGTTCAGGAGAAGTAGTTGAGAAACTTTCGCAAATGGTGGAGTACCCGGCGGTAGAAGGAGAAAATATGTTGATGAGTGAGAGCTCTTGCAAACCTCTGGTGAAGGCAGCTGCTGCAAGCAACATGTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LysM Pkinase Pkinase_Tyr

Protein Analysis

595

Amino Acids

65.56

Weight (kDa)

6.52

Isoelectric Point (pI)

45.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM1_NFP_LYK	PF23446	106 - 162	1.2e-10	NFP/LYK LysM1 domain
LysM2_CERK1_LYK3_4_5	PF23472	168 - 221	1.4e-11	LYK3/4/5 LysM2 domain
LysM3_LYK4_5	PF23473	234 - 284	9.2e-10	LYK4/5 LysM3 domain
LysM	PF01476	237 - 264	6.8e-06	LysM domain
PK_Tyr_Ser-Thr	PF07714	462 - 687	2.1e-26	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	462 - 685	8.4e-25	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009956)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01840
fragaria_vesca	FvH4_6g53170 FvH4_6g53170 FvH4_6g53170
malus_domestica	MD09G1013400.v1.1 MD17G1014100.v1.1
prunus_persica	Prupe.3G303700_v2.0.a1
pyrus_communis	pycom111g01140
rosa_chinensis	RchiOBHm_Chr2g0175211
rosa_laevigata	RLG00000022311
rosa_multiflora	Rmu_sc0003920.1_g000020 Rmu_sc0010642.1_g000015 Rmu_sc0043138.1_g000001
rosa_roxburghii	Rroxscaffold_2G00077490
rosa_rugosa	Rorug02G0581400 Rorug02G0581500
rosa_samantha	Rh2AG662100 Rh2BG673300 Rh2CG636500 Rh2DG687200
rosa_wichuraiana	Rw2G054300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	758
AccB7I	CCANNNNNTGG	1 cut(s)	1381
AccII	CGCG	3 cut(s)	510, 602, 820
AciI	CCGC	4 cut(s)	508, 644, 818, 1703
AclWI	GGATC	5 cut(s)	12, 781, 983, 1102, 1631
AcoI	YGGCCR	3 cut(s)	363, 916, 1203
AcsI	RAATTY	2 cut(s)	1292, 1351
AcuI	CTGAAG	3 cut(s)	198, 862, 1071
AfaI	GTAC	4 cut(s)	444, 911, 1220, 1697
AfeI	AGCGCT	1 cut(s)	183
AfiI	CCNNNNNNNGG	3 cut(s)	488, 1381, 1658
AflIII	ACRYGT	2 cut(s)	1040, 1776
AgsI	TTSAA	7 cut(s)	125, 371, 376, 806, 1102, 1297, 1337
AhdI	GACNNNNNGTC	2 cut(s)	596, 1053
AjiI	CACGTC	1 cut(s)	1170
AleI	CACNNNNGTG	1 cut(s)	1377
Alw21I	GWGCWC	1 cut(s)	1739
Alw26I	GTCTC	5 cut(s)	238, 766, 830, 926, 1642
AlwI	GGATC	5 cut(s)	12, 781, 983, 1102, 1631
AlwNI	CAGNNNCTG	1 cut(s)	1766
Ama87I	CYCGRG	1 cut(s)	226
Aor51HI	AGCGCT	1 cut(s)	183
AoxI	GGCC	3 cut(s)	363, 916, 1203
ApeKI	GCWGC	6 cut(s)	105, 641, 1592, 1760, 1763, 1766
ApoI	RAATTY	2 cut(s)	1292, 1351
Asp700I	GAANNNNTTC	2 cut(s)	1368, 1487
AspLEI	GCGC	5 cut(s)	49, 130, 184, 822, 1565
AspS9I	GGNCC	1 cut(s)	491
AsuC2I	CCSGG	3 cut(s)	227, 228, 1700
AsuHPI	GGTGA	6 cut(s)	167, 356, 667, 998, 1364, 1765
AsuNHI	GCTAGC	1 cut(s)	626
AvaI	CYCGRG	1 cut(s)	226
AvaII	GGWCC	1 cut(s)	491
BalI	TGGCCA	2 cut(s)	365, 1205
BanII	GRGCYC	1 cut(s)	1739
BbsI	GAAGAC	1 cut(s)	879
Bbv12I	GWGCWC	1 cut(s)	1739
BbvCI	CCTCAGC	3 cut(s)	665, 1184, 1544
BbvI	GCAGC	6 cut(s)	117, 628, 1604, 1750, 1753, 1772
BccI	CCATC	4 cut(s)	155, 785, 1020, 1549
BceAI	ACGGC	2 cut(s)	903, 931
BcgI	CGANNNNNNTGC	2 cut(s)	877, 911
BcnI	CCSGG	3 cut(s)	227, 228, 1700
BcoDI	GTCTC	5 cut(s)	238, 766, 830, 926, 1642
BfaI	CTAG	5 cut(s)	185, 497, 537, 627, 1464
BfoI	RGCGCY	1 cut(s)	185
BisI	GCNGC	8 cut(s)	106, 642, 645, 818, 1593, 1761, 1764, 1767
BlpI	GCTNAGC	1 cut(s)	725
BlsI	GCNGC	8 cut(s)	107, 643, 646, 819, 1594, 1762, 1765, 1768
Bme1390I	CCNGG	3 cut(s)	227, 228, 1700
Bme18I	GGWCC	1 cut(s)	491
BmeRI	GACNNNNNGTC	2 cut(s)	596, 1053
BmeT110I	CYCGRG	1 cut(s)	226
BmgBI	CACGTC	1 cut(s)	1170
BmgT120I	GGNCC	1 cut(s)	491
BmiI	GGNNCC	2 cut(s)	1175, 1359
BmrFI	CCNGG	3 cut(s)	227, 228, 1700
BmrI	ACTGGG	1 cut(s)	326
BmsI	GCATC	4 cut(s)	744, 988, 1261, 1579
BmtI	GCTAGC	1 cut(s)	630
BmuI	ACTGGG	1 cut(s)	326
BpiI	GAAGAC	1 cut(s)	879
Bpu10I	CCTNAGC	4 cut(s)	665, 731, 1184, 1544
Bpu1102I	GCTNAGC	1 cut(s)	725
BpuEI	CTTGAG	3 cut(s)	298, 369, 955
BpuMI	CCSGG	3 cut(s)	227, 228, 1700
BsaBI	GATNNNNATC	1 cut(s)	9
BsaI	GGTCTC	2 cut(s)	766, 1642
BsaJI	CCNNGG	6 cut(s)	226, 239, 846, 913, 1206, 1375
BsaXI	ACNNNNNCTCC	4 cut(s)	1421, 1451, 1653, 1683
Bsc4I	CCNNNNNNNGG	3 cut(s)	488, 1381, 1658
Bse1I	ACTGG	3 cut(s)	332, 1112, 1138
Bse3DI	GCAATG	6 cut(s)	115, 171, 630, 636, 1143, 1264
Bse8I	GATNNNNATC	1 cut(s)	9
BseDI	CCNNGG	6 cut(s)	226, 239, 846, 913, 1206, 1375
BseGI	GGATG	5 cut(s)	210, 689, 1012, 1291, 1560
BseJI	GATNNNNATC	1 cut(s)	9
BseLI	CCNNNNNNNGG	3 cut(s)	488, 1381, 1658
BseMI	GCAATG	6 cut(s)	115, 171, 630, 636, 1143, 1264
BseMII	CTCAG	5 cut(s)	320, 656, 937, 1175, 1535
BseNI	ACTGG	3 cut(s)	332, 1112, 1138
BseRI	GAGGAG	1 cut(s)	866
BseX3I	CGGCCG	1 cut(s)	916
BseXI	GCAGC	6 cut(s)	117, 628, 1604, 1750, 1753, 1772
BseYI	CCCAGC	1 cut(s)	544
Bsh1236I	CGCG	3 cut(s)	510, 602, 820
Bsh1285I	CGRYCG	1 cut(s)	919
BshFI	GGCC	3 cut(s)	365, 918, 1205
BsiEI	CGRYCG	1 cut(s)	919
BsiHKAI	GWGCWC	1 cut(s)	1739
BsiHKCI	CYCGRG	1 cut(s)	226
BsiSI	CCGG	2 cut(s)	227, 1700
BslFI	GGGAC	3 cut(s)	276, 527, 1051
BslI	CCNNNNNNNGG	3 cut(s)	488, 1381, 1658
BsmAI	GTCTC	5 cut(s)	238, 766, 830, 926, 1642
BsmBI	CGTCTC	1 cut(s)	926
BsmFI	GGGAC	3 cut(s)	276, 527, 1051
BsnI	GGCC	3 cut(s)	365, 918, 1205
Bso31I	GGTCTC	2 cut(s)	766, 1642
BsoBI	CYCGRG	1 cut(s)	226
Bsp1286I	GDGCHC	1 cut(s)	1739
Bsp143I	GATC	8 cut(s)	4, 413, 603, 681, 773, 975, 1094, 1636
Bsp1720I	GCTNAGC	1 cut(s)	725
Bsp19I	CCATGG	2 cut(s)	846, 1206
Bsp68I	TCGCGA	1 cut(s)	602
BspACI	CCGC	4 cut(s)	508, 644, 818, 1703
BspANI	GGCC	3 cut(s)	365, 918, 1205
BspCNI	CTCAG	5 cut(s)	319, 657, 936, 1176, 1536
BspFNI	CGCG	3 cut(s)	510, 602, 820
BspLI	GGNNCC	2 cut(s)	1175, 1359
BspOI	GCTAGC	1 cut(s)	630
BspPI	GGATC	5 cut(s)	12, 781, 983, 1102, 1631
BspQI	GCTCTTC	1 cut(s)	1259
BspTNI	GGTCTC	2 cut(s)	766, 1642
BsrDI	GCAATG	6 cut(s)	115, 171, 630, 636, 1143, 1264
BsrI	ACTGG	3 cut(s)	332, 1112, 1138
BssECI	CCNNGG	6 cut(s)	226, 239, 846, 913, 1206, 1375
BssMI	GATC	8 cut(s)	4, 413, 603, 681, 773, 975, 1094, 1636
BssT1I	CCWWGG	4 cut(s)	239, 846, 1206, 1375
Bst4CI	ACNGT	3 cut(s)	802, 1118, 1218
Bst6I	CTCTTC	2 cut(s)	462, 1259
BstAPI	GCANNNNNTGC	1 cut(s)	1766
BstC8I	GCNNGC	2 cut(s)	628, 1771
BstDEI	CTNAG	7 cut(s)	306, 665, 725, 731, 923, 1184, 1544
BstDSI	CCRYGG	3 cut(s)	846, 913, 1206
BstF5I	GGATG	5 cut(s)	210, 689, 1012, 1291, 1560
BstFNI	CGCG	3 cut(s)	510, 602, 820
BstH2I	RGCGCY	1 cut(s)	185
BstHHI	GCGC	5 cut(s)	49, 130, 184, 822, 1565
BstKTI	GATC	8 cut(s)	7, 416, 606, 684, 776, 978, 1097, 1639
BstMAI	GTCTC	5 cut(s)	238, 766, 830, 926, 1642
BstMBI	GATC	8 cut(s)	4, 413, 603, 681, 773, 975, 1094, 1636
BstMCI	CGRYCG	1 cut(s)	919
BstMWI	GCNNNNNNNGC	9 cut(s)	105, 114, 168, 632, 641, 826, 1569, 1613, 1766
BstNSI	RCATGY	3 cut(s)	1044, 1225, 1780
BstSCI	CCNGG	3 cut(s)	225, 226, 1698
BstUI	CGCG	3 cut(s)	510, 602, 820
BstV1I	GCAGC	6 cut(s)	117, 628, 1604, 1750, 1753, 1772
BstV2I	GAAGAC	1 cut(s)	879
BstX2I	RGATCY	1 cut(s)	1636
BstYI	RGATCY	1 cut(s)	1636
BstZI	CGGCCG	1 cut(s)	916
BsuRI	GGCC	3 cut(s)	365, 918, 1205
BtgI	CCRYGG	3 cut(s)	846, 913, 1206
BtgZI	GCGATG	1 cut(s)	1238
BtrI	CACGTC	1 cut(s)	1170
BtsCI	GGATG	5 cut(s)	210, 689, 1012, 1291, 1560
BtsIMutI	CAGTG	3 cut(s)	798, 931, 1395
BtuMI	TCGCGA	1 cut(s)	602
Cac8I	GCNNGC	2 cut(s)	628, 1771
CaiI	CAGNNNCTG	1 cut(s)	1766
CfoI	GCGC	5 cut(s)	49, 130, 184, 822, 1565
Cfr13I	GGNCC	1 cut(s)	491
Cfr9I	CCCGGG	1 cut(s)	226
CseI	GACGC	1 cut(s)	529
Csp6I	GTAC	4 cut(s)	443, 910, 1219, 1696
CviAII	CATG	8 cut(s)	847, 959, 995, 1041, 1152, 1207, 1222, 1777
CviQI	GTAC	4 cut(s)	443, 910, 1219, 1696
DdeI	CTNAG	7 cut(s)	306, 665, 725, 731, 923, 1184, 1544
DpnI	GATC	8 cut(s)	6, 415, 605, 683, 775, 977, 1096, 1638
DpnII	GATC	8 cut(s)	4, 413, 603, 681, 773, 975, 1094, 1636
DrdI	GACNNNNNNGTC	1 cut(s)	758
DriI	GACNNNNNGTC	2 cut(s)	596, 1053
DseDI	GACNNNNNNGTC	1 cut(s)	758
EaeI	YGGCCR	3 cut(s)	363, 916, 1203
EagI	CGGCCG	1 cut(s)	916
Eam1104I	CTCTTC	2 cut(s)	462, 1259
Eam1105I	GACNNNNNGTC	2 cut(s)	596, 1053
EarI	CTCTTC	2 cut(s)	462, 1259
Ecl136II	GAGCTC	1 cut(s)	1737
EclXI	CGGCCG	1 cut(s)	916
Eco130I	CCWWGG	4 cut(s)	239, 846, 1206, 1375
Eco24I	GRGCYC	1 cut(s)	1739
Eco31I	GGTCTC	2 cut(s)	766, 1642
Eco47I	GGWCC	1 cut(s)	491
Eco47III	AGCGCT	1 cut(s)	183
Eco52I	CGGCCG	1 cut(s)	916
Eco53kI	GAGCTC	1 cut(s)	1737
Eco57I	CTGAAG	3 cut(s)	198, 862, 1071
Eco88I	CYCGRG	1 cut(s)	226
EcoICRI	GAGCTC	1 cut(s)	1737
EcoRI	GAATTC	1 cut(s)	1292
EcoT14I	CCWWGG	4 cut(s)	239, 846, 1206, 1375
EcoT22I	ATGCAT	1 cut(s)	582
EcoT38I	GRGCYC	1 cut(s)	1739
ErhI	CCWWGG	4 cut(s)	239, 846, 1206, 1375
Esp3I	CGTCTC	1 cut(s)	926
FaeI	CATG	8 cut(s)	850, 962, 998, 1044, 1155, 1210, 1225, 1780
FalI	AAGNNNNNCTT	2 cut(s)	1095, 1127
FaqI	GGGAC	3 cut(s)	276, 527, 1051
FatI	CATG	8 cut(s)	846, 958, 994, 1040, 1151, 1206, 1221, 1776
FauI	CCCGC	1 cut(s)	515
Fnu4HI	GCNGC	8 cut(s)	106, 642, 645, 818, 1593, 1761, 1764, 1767
FokI	GGATG	5 cut(s)	197, 676, 999, 1298, 1567
FriOI	GRGCYC	1 cut(s)	1739
Fsp4HI	GCNGC	8 cut(s)	106, 642, 645, 818, 1593, 1761, 1764, 1767
FspBI	CTAG	5 cut(s)	185, 497, 537, 627, 1464
GlaI	GCGC	5 cut(s)	48, 129, 183, 821, 1564
GluI	GCNGC	8 cut(s)	106, 642, 645, 818, 1593, 1761, 1764, 1767
GsaI	CCCAGC	1 cut(s)	548
HaeII	RGCGCY	1 cut(s)	185
HaeIII	GGCC	3 cut(s)	365, 918, 1205
HapII	CCGG	2 cut(s)	227, 1700
HgaI	GACGC	1 cut(s)	529
HhaI	GCGC	5 cut(s)	49, 130, 184, 822, 1565
Hin1II	CATG	8 cut(s)	850, 962, 998, 1044, 1155, 1210, 1225, 1780
Hin6I	GCGC	5 cut(s)	47, 128, 182, 820, 1563
HinP1I	GCGC	5 cut(s)	47, 128, 182, 820, 1563
HincII	GTYRAC	1 cut(s)	135
HindII	GTYRAC	1 cut(s)	135
HinfI	GANTC	5 cut(s)	315, 463, 658, 699, 1061
HpaII	CCGG	2 cut(s)	227, 1700
HphI	GGTGA	6 cut(s)	167, 356, 667, 998, 1364, 1765
Hpy166II	GTNNAC	4 cut(s)	135, 557, 910, 1372
Hpy188I	TCNGA	7 cut(s)	152, 215, 462, 740, 1017, 1501, 1528
Hpy188III	TCNNGA	9 cut(s)	312, 386, 497, 601, 1058, 1165, 1196, 1361, 1659
Hpy8I	GTNNAC	4 cut(s)	135, 557, 910, 1372
HpyAV	CCTTC	5 cut(s)	751, 893, 1046, 1703, 1750
HpyCH4III	ACNGT	3 cut(s)	802, 1118, 1218
HpyCH4IV	ACGT	1 cut(s)	1169
HpyF10VI	GCNNNNNNNGC	9 cut(s)	105, 114, 168, 632, 641, 826, 1569, 1613, 1766
HpyF3I	CTNAG	7 cut(s)	306, 665, 725, 731, 923, 1184, 1544
HpySE526I	ACGT	1 cut(s)	1169
Hsp92II	CATG	8 cut(s)	850, 962, 998, 1044, 1155, 1210, 1225, 1780
HspAI	GCGC	5 cut(s)	47, 128, 182, 820, 1563
Kzo9I	GATC	8 cut(s)	4, 413, 603, 681, 773, 975, 1094, 1636
LguI	GCTCTTC	1 cut(s)	1259
LmnI	GCTCC	3 cut(s)	853, 1173, 1363
Lsp1109I	GCAGC	6 cut(s)	117, 628, 1604, 1750, 1753, 1772
LweI	GCATC	4 cut(s)	744, 988, 1261, 1579
MaeI	CTAG	5 cut(s)	185, 497, 537, 627, 1464
MaeII	ACGT	1 cut(s)	1169
MaeIII	GTNAC	4 cut(s)	264, 344, 749, 794
MalI	GATC	8 cut(s)	6, 415, 605, 683, 775, 977, 1096, 1638
MboI	GATC	8 cut(s)	4, 413, 603, 681, 773, 975, 1094, 1636
MflI	RGATCY	1 cut(s)	1636
MhlI	GDGCHC	1 cut(s)	1739
MlsI	TGGCCA	2 cut(s)	365, 1205
MluCI	AATT	8 cut(s)	371, 517, 549, 1002, 1128, 1292, 1351, 1576
MluNI	TGGCCA	2 cut(s)	365, 1205
MlyI	GAGTC	3 cut(s)	309, 708, 1055
MmeI	TCCRAC	1 cut(s)	1407
Mox20I	TGGCCA	2 cut(s)	365, 1205
Mph1103I	ATGCAT	1 cut(s)	582
MroXI	GAANNNNTTC	2 cut(s)	1368, 1487
MscI	TGGCCA	2 cut(s)	365, 1205
MseI	TTAA	2 cut(s)	1131, 1454
MslI	CAYNNNNRTG	3 cut(s)	611, 1257, 1377
Msp20I	TGGCCA	2 cut(s)	365, 1205
MspA1I	CMGCKG	2 cut(s)	664, 1763
MspI	CCGG	2 cut(s)	227, 1700
MspR9I	CCNGG	3 cut(s)	227, 228, 1700
MvnI	CGCG	3 cut(s)	510, 602, 820
MwoI	GCNNNNNNNGC	9 cut(s)	105, 114, 168, 632, 641, 826, 1569, 1613, 1766
NciI	CCSGG	3 cut(s)	227, 228, 1700
NcoI	CCATGG	2 cut(s)	846, 1206
NdeII	GATC	8 cut(s)	4, 413, 603, 681, 773, 975, 1094, 1636
NheI	GCTAGC	1 cut(s)	626
NlaIII	CATG	8 cut(s)	850, 962, 998, 1044, 1155, 1210, 1225, 1780
NlaIV	GGNNCC	2 cut(s)	1175, 1359
NmuCI	GTSAC	3 cut(s)	344, 749, 794
NruI	TCGCGA	1 cut(s)	602
NsiI	ATGCAT	1 cut(s)	582
NspI	RCATGY	3 cut(s)	1044, 1225, 1780
OliI	CACNNNNGTG	1 cut(s)	1377
PciI	ACATGT	2 cut(s)	1040, 1776
PciSI	GCTCTTC	1 cut(s)	1259
PdmI	GAANNNNTTC	2 cut(s)	1368, 1487
PfeI	GAWTC	2 cut(s)	463, 658
PflMI	CCANNNNNTGG	1 cut(s)	1381
PkrI	GCNGC	8 cut(s)	107, 643, 646, 819, 1594, 1762, 1765, 1768
PleI	GAGTC	3 cut(s)	309, 707, 1055
PpsI	GAGTC	3 cut(s)	309, 707, 1055
PscI	ACATGT	2 cut(s)	1040, 1776
Psp124BI	GAGCTC	1 cut(s)	1739
PspFI	CCCAGC	1 cut(s)	544
PspN4I	GGNNCC	2 cut(s)	1175, 1359
PspPI	GGNCC	1 cut(s)	491
PstNI	CAGNNNCTG	1 cut(s)	1766
PsuI	RGATCY	1 cut(s)	1636
PvuII	CAGCTG	2 cut(s)	664, 1763
RruI	TCGCGA	1 cut(s)	602
RsaI	GTAC	4 cut(s)	444, 911, 1220, 1697
RsaNI	GTAC	4 cut(s)	443, 910, 1219, 1696
RseI	CAYNNNNRTG	3 cut(s)	611, 1257, 1377
SacI	GAGCTC	1 cut(s)	1739
SapI	GCTCTTC	1 cut(s)	1259
SaqAI	TTAA	2 cut(s)	1131, 1454
SatI	GCNGC	8 cut(s)	106, 642, 645, 818, 1593, 1761, 1764, 1767
Sau3AI	GATC	8 cut(s)	4, 413, 603, 681, 773, 975, 1094, 1636
Sau96I	GGNCC	1 cut(s)	491
SchI	GAGTC	3 cut(s)	309, 708, 1055
ScrFI	CCNGG	3 cut(s)	227, 228, 1700
SduI	GDGCHC	1 cut(s)	1739
SfaNI	GCATC	4 cut(s)	744, 988, 1261, 1579
SinI	GGWCC	1 cut(s)	491
SmaI	CCCGGG	1 cut(s)	228
SmiMI	CAYNNNNRTG	3 cut(s)	611, 1257, 1377
SmlI	CTYRAG	3 cut(s)	277, 384, 970
SmoI	CTYRAG	3 cut(s)	277, 384, 970
Sse9I	AATT	8 cut(s)	371, 517, 549, 1002, 1128, 1292, 1351, 1576
SsiI	CCGC	4 cut(s)	508, 644, 818, 1703
SspMI	CTAG	5 cut(s)	185, 497, 537, 627, 1464
SstI	GAGCTC	1 cut(s)	1739
StyD4I	CCNGG	3 cut(s)	225, 226, 1698
StyI	CCWWGG	4 cut(s)	239, 846, 1206, 1375
TaaI	ACNGT	3 cut(s)	802, 1118, 1218
TaiI	ACGT	1 cut(s)	1172
TaqI	TCGA	5 cut(s)	884, 897, 978, 1077, 1587
TasI	AATT	8 cut(s)	371, 517, 549, 1002, 1128, 1292, 1351, 1576
TatI	WGTACW	1 cut(s)	1218
TauI	GCSGC	2 cut(s)	647, 820
TfiI	GAWTC	2 cut(s)	463, 658
Tru1I	TTAA	2 cut(s)	1131, 1454
Tru9I	TTAA	2 cut(s)	1131, 1454
TscAI	CASTG	3 cut(s)	805, 931, 1402
TseFI	GTSAC	3 cut(s)	344, 749, 794
TseI	GCWGC	6 cut(s)	105, 641, 1592, 1760, 1763, 1766
Tsp45I	GTSAC	3 cut(s)	344, 749, 794
TspDTI	ATGAA	5 cut(s)	678, 1132, 1250, 1302, 1647
TspGWI	ACGGA	3 cut(s)	68, 1107, 1361
TspMI	CCCGGG	1 cut(s)	226
TspRI	CASTG	3 cut(s)	805, 931, 1402
Van91I	CCANNNNNTGG	1 cut(s)	1381
VpaK11BI	GGWCC	1 cut(s)	491
XapI	RAATTY	2 cut(s)	1292, 1351
XbaI	TCTAGA	1 cut(s)	496
XceI	RCATGY	3 cut(s)	1044, 1225, 1780
XcmI	CCANNNNNNNNNTGG	1 cut(s)	358
XmaI	CCCGGG	1 cut(s)	226
XmnI	GAANNNNTTC	2 cut(s)	1368, 1487
XspI	CTAG	5 cut(s)	185, 497, 537, 627, 1464
Zsp2I	ATGCAT	1 cut(s)	582

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.