Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0010155

Physical Location & Seq

Genomic Coordinates Forward (+)

337906 .. 340442

Gene Structure 2537 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G02010.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2478 bp

ATGAAACTTTATTGCAACTCTAATGAAGTCCGCTCACGAACTCTTGCCACTTTACGGCAGCTCCGACAACCGTCACCGGCGACATTTCTCGACACACGACGTGTTGATGCTCGCATCATTAAAACTGGCTTCGACACAGATACGTGTCGCTCCAATTTCATCGTCGAGGACCTTCTCAGGAGAGGTCAAGTTTCTGCTGCACGCAAGGTGTACGACGAAATGCCTCACAAGAACACTGTCTCCACCAATACCATGATTTCCGGTCACGTGAAGACGGGTGATGTTTCCAGCGCCCGAGACCTTTTTGACGCAATGCCCGACAGAACTGTTGTCACGTGGACTATCTTGATGGGGTGGTACGCCCGGAACAGCCACTTCGATGAAGCTTTCAAGCTTTTCCGTCAGATGTGCAGGTCTTCTTCCTGTACCCTGCCCGATCATGTCACCTTTACTACGCTTTTACCAGGCTGCAATGACGCTGTTCCCCAGAACGCGGTCGGTCAGGTTCATGCTTTTGCCGTCAAGTTAGGCTTTGATACCAACCCCTTTCTCACTGTCTCCAATGTTCTGCTTAAGTCCTACTGTGAGGTAAGGCGACTCGATTTAGCCTGTGTGTTGTTCGAGGAGATTCCAGAGAAAGACTCTGTCACGTTCAACACCCTTATTACAGGGTACGAGAAGGATGGCTTGTACACGGAGTCCATCCATCTCTTTCTTAAAATGCGGCAGTCTGGTCACCAGCCTTCAGATTTCACATTTTCTGGGGTTCTCAAGGCTGTTGTTGGGCTGCACGATTTTGCTCTTGGTCAGCAACTCCATGCTCTGTCAGTTACTACCGGCTTCTCCAGGGATGCTTCTGTTGGCAATCAAATTCTTGATTTCTACTCCAAACATGACCGTGTTCTTGAAACTAGGATGCTTTTTGATGAGATGCCTGAGTTGGATTTTGTTTCTTACAATGTGGTCATCTCAAGCTACTCACAGGCTGATCAATACGAGGCATCCCTCCACTTCTTTAGAGAAATGCAGTGCATGGGGTTTGATCGCAGAAACTTCCCTTTCGCGACGATGCTGAGCATCGCTGCTAACTTGTCATCCTTGCAGATGGGTCGACAATTGCACTGCCAGGCCCTCCTGGCAACGGCTGATTCAATCCTTCATGTTGGGAATTCTTTAGTAGATATGTATGCAAAATGCGAAATGTTCGAGGAAGCTGAGTTGATATTCAAGAGTTTACCACAACGGACCACCGTTTCCTGGACTGCCTTGATCTCAGGTTACGTTCAGAAAGGGCTTCATGGAGCTGGGCTTAAGTTGTTCACCAAGATGCGAGGATCAAATTTACGAGCAGACCAATCAACTTTTGCTACTGTATTGAAAGCTTCCGCTAGTTTCGCTTCTCTGTTGCTGGGGAAACAACTCCATGCATTCATAATCAGATCAGGGAACTTGGAAAATGTGTTCTCCGGAAGTGGCCTGGTTGATATGTACGCCAAATGTGGTTCTATCAAAGATGCAGTTCAAGTATTCGAAGAGATGCCCGATAGAAATGCAGTTTCCTGGAATGCTTTGATTTCAGCACACGCTGATAACGGAGATGGAGAAGCAGCTATTGGTGCATTTGCAAAGATGATTGAATCTGGTCTCCAGCCAGATTCAGTCAGCATCTTAGGCGTCTTAACTGCATGTAGTCACTGTGGATTTGTTGAACAAGGAACAGAATATTTCCAGGCAATGTCTCCAATCTATGGGATAACTCCAAAAAAGAAGCATTATGCATGCATGCTGGATTTGCTTGGCAGAAACGGAAGATTTGCAGAAGCAGAGAAGTTGATGGACGAAATGCCCTTTGAGCCAGATGAAATTATGTGGTCGTCAGTGTTGAACGCATGTCGGATTCACAAGAATCAAAGCCTTGCTGAGAGAGCAGCAGAGAAGCTCTTCAGTATGGAGAAGCTCAGGGACGCTGCTGCTTATGTAAGCATGTCAAACATCTATGCAGCGGCTGGGGAATGGGAAAAAGTTAGGGATGTGAAGAAAGCAATGCGCGAACGCGGAATCAAAAAGGTTCCGGCTTATAGCTGGGTAGAAGTTAACCACAAGATTCATGTGTTCTCATCAAATGATCAGACACACCCAAACGGAGATGAGATCGTGAGAAAGATCAATGAATTGACAGCTGAGATTGAGAGAGAAGGGTACAAGCCTGACACTAGTTCGGTAGTACAAGACGTAGATGAGCAGATGAAGATTGAGTCGCTTAAGTACCACAGTGAACGTTTAGCCGTTGCATTTGCTCTGATCAGTACACCAGAAGGGTGTCCGATTGTTGTGATGAAGAACTTGAGGGCCTGCAGGGATTGCCATGCTGCAATAAAACTAATATCGAAGATTGTAAAGAGGGAGATAACTGTAAGGGATACAAGCAGATTCCATCACTTTAGTGAGGGGGTCTGTTCTTGTGGTGATTACTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

825

Amino Acids

92.37

Weight (kDa)

6.52

Isoelectric Point (pI)

40.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	109 - 157	1.3e-11	PPR repeat family
PPR	PF01535	111 - 139	3.2e-06	PPR repeat
PPR_2	PF13041	213 - 259	3.6e-10	PPR repeat family
PPR_2	PF13041	416 - 461	3.2e-07	PPR repeat family
PPR_2	PF13041	517 - 564	2e-08	PPR repeat family
E_motif	PF20431	634 - 697	4e-15	E motif
DYW_deaminase	PF14432	733 - 825	2.1e-39	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010155)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02010
malus_domestica	MD09G1003500.v1.1
prunus_persica	Prupe.3G313000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0139751
rosa_laevigata	RLG00000019830
rosa_multiflora	Rmu_co8047706.1_g000001 Rmu_sc0009714.1_g000012
rosa_roxburghii	Rroxscaffold_2G00105230
rosa_rugosa	Rorug02G0359700 Rorug02G0359800 Rorug02G0359900 Rorug04G0363900
rosa_samantha	Rh2AG409400 Rh2AG409500 Rh2BG419800 Rh2BG419900 Rh2CG395700 Rh2CG395800 Rh2DG429300 Rh4CG451800
rosa_wichuraiana	Rw2G033420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	402
AccB7I	CCANNNNNTGG	1 cut(s)	1748
AccBSI	CCGCTC	1 cut(s)	33
AccI	GTMKAC	1 cut(s)	1111
AccII	CGCG	4 cut(s)	494, 1064, 2049, 2055
AccIII	TCCGGA	1 cut(s)	1466
AciI	CCGC	6 cut(s)	31, 494, 724, 1386, 2003, 2055
AclI	AACGTT	1 cut(s)	2278
AclWI	GGATC	1 cut(s)	1342
AcsI	RAATTY	3 cut(s)	870, 1168, 1339
AcuI	CTGAAG	2 cut(s)	729, 1927
AcvI	CACGTG	2 cut(s)	268, 336
AcyI	GRCGYC	1 cut(s)	1674
AdeI	CACNNNGTG	1 cut(s)	101
AfiI	CCNNNNNNNGG	5 cut(s)	54, 493, 1141, 1257, 1748
AflII	CTTAAG	3 cut(s)	572, 1310, 2261
AflIII	ACRYGT	2 cut(s)	100, 143
AhlI	ACTAGT	1 cut(s)	2213
AjiI	CACGTC	1 cut(s)	101
AjnI	CCWGG	8 cut(s)	463, 845, 1125, 1134, 1256, 1476, 1559, 1728
AjuI	GAANNNNNNNTTGG	2 cut(s)	1596, 1628
AleI	CACNNNNGTG	1 cut(s)	2442
AloI	GAACNNNNNNTCC	4 cut(s)	224, 256, 1445, 1477
Alw26I	GTCTC	5 cut(s)	244, 291, 562, 1649, 1743
AlwI	GGATC	1 cut(s)	1342
AlwNI	CAGNNNCTG	1 cut(s)	2006
Ama87I	CYCGRG	1 cut(s)	294
Aor13HI	TCCGGA	1 cut(s)	1466
AoxI	GGCC	3 cut(s)	1128, 1474, 2349
ApoI	RAATTY	3 cut(s)	870, 1168, 1339
Asp700I	GAANNNNTTC	1 cut(s)	1940
AspLEI	GCGC	2 cut(s)	293, 2049
AspS9I	GGNCC	4 cut(s)	169, 1129, 1245, 2349
AsuC2I	CCSGG	1 cut(s)	364
AsuHPI	GGTGA	6 cut(s)	66, 290, 436, 728, 1312, 2477
AsuII	TTCGAA	1 cut(s)	1530
AvaI	CYCGRG	1 cut(s)	294
AvaII	GGWCC	2 cut(s)	169, 1245
BbrPI	CACGTG	2 cut(s)	268, 336
BbsI	GAAGAC	2 cut(s)	278, 408
BccI	CCATC	8 cut(s)	343, 677, 710, 714, 1099, 1592, 1828, 2442
BceAI	ACGGC	4 cut(s)	71, 503, 1158, 2270
BcgI	CGANNNNNNTGC	4 cut(s)	1091, 1125, 1532, 1566
BciT130I	CCWGG	8 cut(s)	465, 847, 1127, 1136, 1258, 1478, 1561, 1730
BciVI	GTATCC	1 cut(s)	2413
BclI	TGATCA	3 cut(s)	988, 2125, 2301
BcnI	CCSGG	1 cut(s)	364
BcoDI	GTCTC	5 cut(s)	244, 291, 562, 1649, 1743
BcuI	ACTAGT	1 cut(s)	2213
BfaI	CTAG	3 cut(s)	912, 1389, 2214
BfmI	CTRYAG	1 cut(s)	2353
BfoI	RGCGCY	1 cut(s)	294
BfrI	CTTAAG	3 cut(s)	572, 1310, 2261
BfuAI	ACCTGC	1 cut(s)	402
BfuI	GTATCC	1 cut(s)	2413
BglI	GCCNNNNNGGC	1 cut(s)	1136
BlpI	GCTNAGC	1 cut(s)	1073
Bme1390I	CCNGG	9 cut(s)	364, 465, 847, 1127, 1136, 1258, 1478, 1561, 1730
Bme18I	GGWCC	2 cut(s)	169, 1245
BmeT110I	CYCGRG	1 cut(s)	294
BmgBI	CACGTC	1 cut(s)	101
BmgT120I	GGNCC	4 cut(s)	169, 1129, 1245, 2349
BmiI	GGNNCC	1 cut(s)	2070
BmrFI	CCNGG	9 cut(s)	364, 465, 847, 1127, 1136, 1258, 1478, 1561, 1730
BoxI	GACNNNNGTC	1 cut(s)	70
BpiI	GAAGAC	2 cut(s)	278, 408
BplI	GAGNNNNNCTC	2 cut(s)	626, 658
BpmI	CTGGAG	2 cut(s)	829, 1631
Bpu10I	CCTNAGC	1 cut(s)	1958
Bpu1102I	GCTNAGC	1 cut(s)	1073
Bpu14I	TTCGAA	1 cut(s)	1530
BpuEI	CTTGAG	3 cut(s)	755, 955, 2365
BpuMI	CCSGG	1 cut(s)	364
BsaAI	YACGTR	3 cut(s)	144, 268, 336
BsaHI	GRCGYC	1 cut(s)	1674
BsaI	GGTCTC	2 cut(s)	291, 1649
BsaJI	CCNNGG	1 cut(s)	846
BsaWI	WCCGGW	2 cut(s)	260, 1466
BsaXI	ACNNNNNCTCC	4 cut(s)	45, 75, 224, 254
Bsc4I	CCNNNNNNNGG	5 cut(s)	54, 493, 1141, 1257, 1748
Bse118I	RCCGGY	2 cut(s)	76, 836
Bse1I	ACTGG	2 cut(s)	130, 2477
Bse3DI	GCAATG	4 cut(s)	318, 478, 1740, 2049
BseAI	TCCGGA	1 cut(s)	1466
BseBI	CCWGG	8 cut(s)	465, 847, 1127, 1136, 1258, 1478, 1561, 1730
BseDI	CCNNGG	1 cut(s)	846
BseGI	GGATG	7 cut(s)	688, 702, 856, 921, 1001, 1094, 2035
BseLI	CCNNNNNNNGG	5 cut(s)	54, 493, 1141, 1257, 1748
BseMI	GCAATG	4 cut(s)	318, 478, 1740, 2049
BseMII	CTCAG	8 cut(s)	190, 927, 1064, 1206, 1287, 1911, 1972, 2172
BseNI	ACTGG	2 cut(s)	130, 2477
BseRI	GAGGAG	1 cut(s)	638
BseYI	CCCAGC	4 cut(s)	1304, 1408, 2006, 2082
BsgI	GTGCAG	3 cut(s)	183, 430, 773
Bsh1236I	CGCG	4 cut(s)	494, 1064, 2049, 2055
Bsh1285I	CGRYCG	1 cut(s)	498
BshFI	GGCC	3 cut(s)	1130, 1476, 2351
BsiEI	CGRYCG	1 cut(s)	498
BsiHKCI	CYCGRG	1 cut(s)	294
BsiSI	CCGG	6 cut(s)	77, 261, 364, 837, 1467, 2072
BslFI	GGGAC	1 cut(s)	1976
BslI	CCNNNNNNNGG	5 cut(s)	54, 493, 1141, 1257, 1748
BsmAI	GTCTC	5 cut(s)	244, 291, 562, 1649, 1743
BsmFI	GGGAC	1 cut(s)	1976
BsmI	GAATGC	2 cut(s)	1427, 1570
BsnI	GGCC	3 cut(s)	1130, 1476, 2351
Bso31I	GGTCTC	2 cut(s)	291, 1649
BsoBI	CYCGRG	1 cut(s)	294
Bsp119I	TTCGAA	1 cut(s)	1530
Bsp13I	TCCGGA	1 cut(s)	1466
Bsp1407I	TGTACA	1 cut(s)	690
Bsp1720I	GCTNAGC	1 cut(s)	1073
Bsp68I	TCGCGA	1 cut(s)	1064
BspACI	CCGC	6 cut(s)	31, 494, 724, 1386, 2003, 2055
BspANI	GGCC	3 cut(s)	1130, 1476, 2351
BspCNI	CTCAG	8 cut(s)	189, 928, 1065, 1207, 1286, 1912, 1971, 2173
BspEI	TCCGGA	1 cut(s)	1466
BspFNI	CGCG	4 cut(s)	494, 1064, 2049, 2055
BspLI	GGNNCC	1 cut(s)	2070
BspMAI	CTGCAG	1 cut(s)	2357
BspMI	ACCTGC	1 cut(s)	402
BspPI	GGATC	1 cut(s)	1342
BspQI	GCTCTTC	1 cut(s)	1946
BspT104I	TTCGAA	1 cut(s)	1530
BspTI	CTTAAG	3 cut(s)	572, 1310, 2261
BspTNI	GGTCTC	2 cut(s)	291, 1649
BsrBI	CCGCTC	1 cut(s)	33
BsrDI	GCAATG	4 cut(s)	318, 478, 1740, 2049
BsrFI	RCCGGY	2 cut(s)	76, 836
BsrGI	TGTACA	1 cut(s)	690
BsrI	ACTGG	2 cut(s)	130, 2477
BssAI	RCCGGY	2 cut(s)	76, 836
BssECI	CCNNGG	1 cut(s)	846
BssNI	GRCGYC	1 cut(s)	1674
Bst2UI	CCWGG	8 cut(s)	465, 847, 1127, 1136, 1258, 1478, 1561, 1730
Bst6I	CTCTTC	2 cut(s)	1527, 1946
BstACI	GRCGYC	1 cut(s)	1674
BstAFI	CTTAAG	3 cut(s)	572, 1310, 2261
BstAPI	GCANNNNNTGC	1 cut(s)	2361
BstAUI	TGTACA	1 cut(s)	690
BstBAI	YACGTR	3 cut(s)	144, 268, 336
BstBI	TTCGAA	1 cut(s)	1530
BstC8I	GCNNGC	5 cut(s)	112, 202, 1780, 1784, 2353
BstDEI	CTNAG	9 cut(s)	176, 936, 1073, 1215, 1273, 1669, 1920, 1958, 2181
BstEII	GGTNACC	1 cut(s)	734
BstF5I	GGATG	7 cut(s)	688, 702, 856, 921, 1001, 1094, 2035
BstFNI	CGCG	4 cut(s)	494, 1064, 2049, 2055
BstH2I	RGCGCY	1 cut(s)	294
BstHHI	GCGC	2 cut(s)	293, 2049
BstMAI	GTCTC	5 cut(s)	244, 291, 562, 1649, 1743
BstMCI	CGRYCG	1 cut(s)	498
BstMWI	GCNNNNNNNGC	8 cut(s)	1136, 1394, 1616, 1671, 1792, 1852, 1925, 2361
BstNI	CCWGG	8 cut(s)	465, 847, 1127, 1136, 1258, 1478, 1561, 1730
BstNSI	RCATGY	5 cut(s)	1689, 1782, 1786, 1893, 1987
BstPAI	GACNNNNGTC	1 cut(s)	70
BstPI	GGTNACC	1 cut(s)	734
BstSCI	CCNGG	9 cut(s)	362, 463, 845, 1125, 1134, 1256, 1476, 1559, 1728
BstSFI	CTRYAG	1 cut(s)	2353
BstUI	CGCG	4 cut(s)	494, 1064, 2049, 2055
BstV2I	GAAGAC	2 cut(s)	278, 408
BsuI	GTATCC	1 cut(s)	2413
BsuRI	GGCC	3 cut(s)	1130, 1476, 2351
BtgZI	GCGATG	1 cut(s)	1063
BtrI	CACGTC	1 cut(s)	101
BtsCI	GGATG	7 cut(s)	688, 702, 856, 921, 1001, 1094, 2035
BtsI	GCAGTG	2 cut(s)	1034, 1120
BtsIMutI	CAGTG	7 cut(s)	234, 552, 1034, 1120, 1693, 1884, 2278
BtuMI	TCGCGA	1 cut(s)	1064
BveI	ACCTGC	1 cut(s)	402
Cac8I	GCNNGC	5 cut(s)	112, 202, 1780, 1784, 2353
CaiI	CAGNNNCTG	1 cut(s)	2006
CfoI	GCGC	2 cut(s)	293, 2049
Cfr10I	RCCGGY	2 cut(s)	76, 836
Cfr13I	GGNCC	4 cut(s)	169, 1129, 1245, 2349
CseI	GACGC	4 cut(s)	317, 485, 1663, 1973
DdeI	CTNAG	9 cut(s)	176, 936, 1073, 1215, 1273, 1669, 1920, 1958, 2181
DraIII	CACNNNGTG	1 cut(s)	101
Eam1104I	CTCTTC	2 cut(s)	1527, 1946
EarI	CTCTTC	2 cut(s)	1527, 1946
Eco31I	GGTCTC	2 cut(s)	291, 1649
Eco47I	GGWCC	2 cut(s)	169, 1245
Eco57I	CTGAAG	2 cut(s)	729, 1927
Eco72I	CACGTG	2 cut(s)	268, 336
Eco88I	CYCGRG	1 cut(s)	294
Eco91I	GGTNACC	1 cut(s)	734
EcoO109I	RGGNCCY	3 cut(s)	169, 1129, 2349
EcoO65I	GGTNACC	1 cut(s)	734
EcoRI	GAATTC	1 cut(s)	1168
EcoRII	CCWGG	8 cut(s)	463, 845, 1125, 1134, 1256, 1476, 1559, 1728
EcoT22I	ATGCAT	3 cut(s)	1429, 1780, 1784
FalI	AAGNNNNNCTT	4 cut(s)	515, 547, 671, 703
FaqI	GGGAC	1 cut(s)	1976
FbaI	TGATCA	3 cut(s)	988, 2125, 2301
FblI	GTMKAC	1 cut(s)	1111
FokI	GGATG	7 cut(s)	689, 695, 863, 928, 988, 1081, 2042
FspBI	CTAG	3 cut(s)	912, 1389, 2214
GlaI	GCGC	2 cut(s)	292, 2048
GsaI	CCCAGC	4 cut(s)	1308, 1412, 2010, 2086
GsuI	CTGGAG	2 cut(s)	829, 1631
HaeII	RGCGCY	1 cut(s)	294
HaeIII	GGCC	3 cut(s)	1130, 1476, 2351
HapII	CCGG	6 cut(s)	77, 261, 364, 837, 1467, 2072
HgaI	GACGC	4 cut(s)	317, 485, 1663, 1973
HhaI	GCGC	2 cut(s)	293, 2049
Hin1I	GRCGYC	1 cut(s)	1674
Hin6I	GCGC	2 cut(s)	291, 2047
HinP1I	GCGC	2 cut(s)	291, 2047
HincII	GTYRAC	2 cut(s)	1112, 2095
HindII	GTYRAC	2 cut(s)	1112, 2095
HindIII	AAGCTT	3 cut(s)	384, 392, 1380
HpaI	GTTAAC	1 cut(s)	2095
HpaII	CCGG	6 cut(s)	77, 261, 364, 837, 1467, 2072
HphI	GGTGA	6 cut(s)	66, 290, 436, 728, 1312, 2477
Hpy166II	GTNNAC	9 cut(s)	211, 339, 693, 1112, 1235, 1320, 2095, 2276, 2309
Hpy188I	TCNGA	9 cut(s)	65, 405, 748, 1287, 1439, 1896, 2130, 2301, 2325
Hpy8I	GTNNAC	9 cut(s)	211, 339, 693, 1112, 1235, 1320, 2095, 2276, 2309
Hpy99I	CGWCG	4 cut(s)	102, 167, 218, 1069
HpyAV	CCTTC	6 cut(s)	182, 673, 753, 1166, 2189, 2309
HpyCH4IV	ACGT	8 cut(s)	100, 143, 267, 335, 650, 1281, 2232, 2278
HpyF10VI	GCNNNNNNNGC	8 cut(s)	1136, 1394, 1616, 1671, 1792, 1852, 1925, 2361
HpyF3I	CTNAG	9 cut(s)	176, 936, 1073, 1215, 1273, 1669, 1920, 1958, 2181
HpySE526I	ACGT	8 cut(s)	100, 143, 267, 335, 650, 1281, 2232, 2278
Hsp92I	GRCGYC	1 cut(s)	1674
HspAI	GCGC	2 cut(s)	291, 2047
Kpn2I	TCCGGA	1 cut(s)	1466
Ksp22I	TGATCA	3 cut(s)	988, 2125, 2301
KspAI	GTTAAC	1 cut(s)	2095
LguI	GCTCTTC	1 cut(s)	1946
LmnI	GCTCC	3 cut(s)	66, 155, 1301
MaeI	CTAG	3 cut(s)	912, 1389, 2214
MaeII	ACGT	8 cut(s)	100, 143, 267, 335, 650, 1281, 2232, 2278
MaeIII	GTNAC	9 cut(s)	72, 263, 331, 442, 646, 734, 829, 1277, 1691
MbiI	CCGCTC	1 cut(s)	33
MfeI	CAATTG	1 cut(s)	1115
MluCI	AATT	7 cut(s)	154, 870, 1115, 1168, 1339, 1863, 2171
MlyI	GAGTC	4 cut(s)	591, 635, 707, 2264
MmeI	TCCRAC	3 cut(s)	88, 921, 1874
Mph1103I	ATGCAT	3 cut(s)	1429, 1780, 1784
MroI	TCCGGA	1 cut(s)	1466
MroXI	GAANNNNTTC	1 cut(s)	1940
MseI	TTAA	7 cut(s)	120, 573, 717, 1311, 1679, 2094, 2262
MslI	CAYNNNNRTG	4 cut(s)	378, 897, 1325, 2442
MspA1I	CMGCKG	2 cut(s)	2003, 2180
MspCI	CTTAAG	3 cut(s)	572, 1310, 2261
MspI	CCGG	6 cut(s)	77, 261, 364, 837, 1467, 2072
MspR9I	CCNGG	9 cut(s)	364, 465, 847, 1127, 1136, 1258, 1478, 1561, 1730
MunI	CAATTG	1 cut(s)	1115
Mva1269I	GAATGC	2 cut(s)	1427, 1570
MvaI	CCWGG	8 cut(s)	465, 847, 1127, 1136, 1258, 1478, 1561, 1730
MvnI	CGCG	4 cut(s)	494, 1064, 2049, 2055
MwoI	GCNNNNNNNGC	8 cut(s)	1136, 1394, 1616, 1671, 1792, 1852, 1925, 2361
NciI	CCSGG	1 cut(s)	364
NlaIV	GGNNCC	1 cut(s)	2070
NmuCI	GTSAC	7 cut(s)	72, 263, 331, 442, 646, 734, 1691
NruI	TCGCGA	1 cut(s)	1064
NsiI	ATGCAT	3 cut(s)	1429, 1780, 1784
NspI	RCATGY	5 cut(s)	1689, 1782, 1786, 1893, 1987
NspV	TTCGAA	1 cut(s)	1530
OliI	CACNNNNGTG	1 cut(s)	2442
PaeI	GCATGC	2 cut(s)	1782, 1786
PciSI	GCTCTTC	1 cut(s)	1946
PcsI	WCGNNNNNNNCGW	2 cut(s)	61, 315
PctI	GAATGC	2 cut(s)	1427, 1570
PdmI	GAANNNNTTC	1 cut(s)	1940
PfeI	GAWTC	9 cut(s)	628, 1148, 1637, 1655, 1897, 1906, 2058, 2104, 2430
PflFI	GACNNNGTC	1 cut(s)	644
PflMI	CCANNNNNTGG	1 cut(s)	1748
PfoI	TCCNGGA	2 cut(s)	1256, 1559
PleI	GAGTC	4 cut(s)	591, 635, 706, 2263
PmaCI	CACGTG	2 cut(s)	268, 336
PmlI	CACGTG	2 cut(s)	268, 336
PpsI	GAGTC	4 cut(s)	591, 635, 706, 2263
Ppu21I	YACGTR	3 cut(s)	144, 268, 336
PpuMI	RGGWCCY	1 cut(s)	169
PshAI	GACNNNNGTC	1 cut(s)	70
Psp1406I	AACGTT	1 cut(s)	2278
Psp5II	RGGWCCY	1 cut(s)	169
Psp6I	CCWGG	8 cut(s)	463, 845, 1125, 1134, 1256, 1476, 1559, 1728
PspCI	CACGTG	2 cut(s)	268, 336
PspEI	GGTNACC	1 cut(s)	734
PspFI	CCCAGC	4 cut(s)	1304, 1408, 2006, 2082
PspGI	CCWGG	8 cut(s)	463, 845, 1125, 1134, 1256, 1476, 1559, 1728
PspN4I	GGNNCC	1 cut(s)	2070
PspPI	GGNCC	4 cut(s)	169, 1129, 1245, 2349
PspPPI	RGGWCCY	1 cut(s)	169
PstI	CTGCAG	1 cut(s)	2357
PstNI	CAGNNNCTG	1 cut(s)	2006
PsyI	GACNNNGTC	1 cut(s)	644
PvuII	CAGCTG	1 cut(s)	2180
RruI	TCGCGA	1 cut(s)	1064
RseI	CAYNNNNRTG	4 cut(s)	378, 897, 1325, 2442
SalI	GTCGAC	1 cut(s)	1110
SapI	GCTCTTC	1 cut(s)	1946
SaqAI	TTAA	7 cut(s)	120, 573, 717, 1311, 1679, 2094, 2262
Sau96I	GGNCC	4 cut(s)	169, 1129, 1245, 2349
SbfI	CCTGCAGG	1 cut(s)	2357
SchI	GAGTC	4 cut(s)	591, 635, 707, 2264
ScrFI	CCNGG	9 cut(s)	364, 465, 847, 1127, 1136, 1258, 1478, 1561, 1730
SdaI	CCTGCAGG	1 cut(s)	2357
SfcI	CTRYAG	1 cut(s)	2353
SfuI	TTCGAA	1 cut(s)	1530
SgrAI	CRCCGGYG	1 cut(s)	76
SinI	GGWCC	2 cut(s)	169, 1245
SmiMI	CAYNNNNRTG	4 cut(s)	378, 897, 1325, 2442
SmlI	CTYRAG	6 cut(s)	572, 770, 970, 1310, 2261, 2344
SmoI	CTYRAG	6 cut(s)	572, 770, 970, 1310, 2261, 2344
SpeI	ACTAGT	1 cut(s)	2213
SphI	GCATGC	2 cut(s)	1782, 1786
Sse8387I	CCTGCAGG	1 cut(s)	2357
Sse9I	AATT	7 cut(s)	154, 870, 1115, 1168, 1339, 1863, 2171
SsiI	CCGC	6 cut(s)	31, 494, 724, 1386, 2003, 2055
SspI	AATATT	1 cut(s)	1724
SspMI	CTAG	3 cut(s)	912, 1389, 2214
StyD4I	CCNGG	9 cut(s)	362, 463, 845, 1125, 1134, 1256, 1476, 1559, 1728
TaiI	ACGT	8 cut(s)	103, 146, 270, 338, 653, 1284, 2235, 2281
TaqII	GACCGA	1 cut(s)	488
TasI	AATT	7 cut(s)	154, 870, 1115, 1168, 1339, 1863, 2171
TatI	WGTACW	3 cut(s)	690, 2224, 2306
TauI	GCSGC	2 cut(s)	727, 2006
TfiI	GAWTC	9 cut(s)	628, 1148, 1637, 1655, 1897, 1906, 2058, 2104, 2430
Tru1I	TTAA	7 cut(s)	120, 573, 717, 1311, 1679, 2094, 2262
Tru9I	TTAA	7 cut(s)	120, 573, 717, 1311, 1679, 2094, 2262
TscAI	CASTG	7 cut(s)	241, 559, 1034, 1127, 1700, 1884, 2278
TseFI	GTSAC	7 cut(s)	72, 263, 331, 442, 646, 734, 1691
Tsp45I	GTSAC	7 cut(s)	72, 263, 331, 442, 646, 734, 1691
TspGWI	ACGGA	6 cut(s)	389, 710, 1258, 1608, 1821, 2157
TspRI	CASTG	7 cut(s)	241, 559, 1034, 1127, 1700, 1884, 2278
Tth111I	GACNNNGTC	1 cut(s)	644
Van91I	CCANNNNNTGG	1 cut(s)	1748
Vha464I	CTTAAG	3 cut(s)	572, 1310, 2261
VpaK11BI	GGWCC	2 cut(s)	169, 1245
XapI	RAATTY	3 cut(s)	870, 1168, 1339
XceI	RCATGY	5 cut(s)	1689, 1782, 1786, 1893, 1987
XmiI	GTMKAC	1 cut(s)	1111
XmnI	GAANNNNTTC	1 cut(s)	1940
XspI	CTAG	3 cut(s)	912, 1389, 2214
Zsp2I	ATGCAT	3 cut(s)	1429, 1780, 1784

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.