Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0010155

Physical Location & Seq

Genomic Coordinates Reverse (-)

27095469 .. 27097940

Gene Structure 2472 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G313000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2472 bp

ATGACAGCATTTAGATCAAATGCGCTCCTAAAATTTAGGACTCCAAGAGTTTCTGAACCTCCAAAAGCAAAACCACTCCTCAACCTCAACCTCAACGACCAAAATTACGTTGACGCCCGTATGATTAAGACGGGCTTCGATCCAAACATTTGCCGCTCTAATTTTCTGGTGAAGAGCTTTCTAAAACGAGGTGAATTATCTCAAGCACGCATACTGTTCGACCAAATGCCTCATAAAAACACTGTCTCGACAAACATGATGATTTCCAGTTACGTCAACTCCGGCAATCTTTATGAGGCTAGAGAGTTGCTTGACACCATGCTTGACCGTACAGCGGTAACATGGACGATACTAATAGGTGGGTATTCGCAAGCAAATCAATACCATGAGGCATTTAAACTTTACGCCGAGATGCATAGGTGGGGAACTAAGCCGGATTATGTGACTTTTGCAACTCTCCTATCTGGATGCAGTGACATGGAGACCACAAAACAAGTAGTTCAAGTTCATTCTCATATCCTTAAATTGGGATATCATTCCACCCTCATGGTCTGCAATTCCTTGCTTGATTCTTACTGCAAATCCCATCGCCTGGATTTAGCGTGTCGACTCTTCAAGGAAATGCCTGAGAGAGATAACGTTACATTCAATGCATTGATAACAGGGTACTCAAAAGATGGTTTGAATGAGGAGGCTATTAACCTCTTTGCTCAAATGCAAAATCTTGGTTACAAGCCTTCTGAGTTTACTTTCGCAGCACTACTTTGTGCTGGTATCGGTTTATATGACATAGCCTTTGGGCAGCAGGTTCATGGTTTTGTGGTGAAGACTAATTTTGTTTCGAACGTGTTCGTGGGGAATGCATTGCTAGATTTCTACTCAAAGCATGACTGTTCGGTTGAAGTAGGGAAACTATTTGATGAGATGCCAGAGTTGGATGGTATTTCCTACAATGTAATCATCACATCTTATGTATGGGATGGGCATTTTAAAAAGTCTCTTGATCTTTTCCGTGAATTACAGCTTACCAAATATGACAGGAAGCAATTCCCTTATGCAACCATGTTGAGCATTGCATCAAATACTCTCAACTTAAACATGGGTCGGCAGATCCATTCCCAGGCCATTGTAGCAACAGCTGATTCAGAAATTCAAGTTGGAAATTCCTTGGTGGATATGTATGCCAAATGTGGCAGATTTGAGGAAGCCAAAAGGATATTTGCACGTCTGGCTGACAGAAGTGCAGTTCCATGGACTGCAATCATCTCCGCATATGTTCAGAACGGGCTCCATGAAGAAGCCCTTGAACTGTTCAATGAGATGCGCAGAGCAAATGTTAGTCCTGACCAAGCCACTTTTGCAAGCATCTTAAGAGCCTCTGCCAATTTAGCTTCACTCTCGCTGGGAAAGCAGTTACACTCATCTGTGATCAGATTAGGATTTGCATCCAATGTTTTTGCTGGAAGTGCACTCCTTGATATGTATGCGAAATGTGGGTCCATGAAAGATGCACTTCAAACTTTTCAAGAGATGCCCAAAAGAAATCTGGTCTGTTGGAATGCCCTGATCTCAGCTTATGCACAAAATGGAGATGGTGAAGGTACTCTTAGATCGTTTGAACAGATGGTTCAGTCAGGTTTTGAGCCAGATTCAGTGAGCTTCCTGAGCGTTTTAACTGCTTGTAGCCACTGTGGGCTTGTTGAGGAAGGATTGCAATACTTCAACTCCTTGAACCGTAACTGTAAAATCGTCCCAAAGAGAGAACACTACGCATCAATGGTTGATATGTTGTGTCGAAGTGGGAGGTTCAATGAAGCAGAGAAATTGATGGCTCAAATGCCATTTGAACCTGATGAAATTATGTGGTCATCAGTTCTAAACTCATGCAAAATTCATAAGAATCAAGAATTGGCAGAGAGAGCAGCAGACCGACTTTTCAATATGGTGGACCTTAGAGATGCAGCTGCTTATGTGAACATGTCGAATATTTATGCAGCAACAGGTCAATGGGAGAGTGTTGGAAAGGTGAAGAGGGCGATGAGGGACAGAGGAGTCAGGAAAGTTACAGCATATAGTTGGGTGGAAGTCAACCACAAAACTCATGTATTTACAGTGAAAGACACAAGCCACCCACAAAGTGGGAAGATTATGAGAAAGATTGATGAGTTGACGAAGGAGATGGAAAAGGAAGGGTACAAGCCGGACACAAGTTGTGCCCTTCACAACGAGGATGAGGAAATAAAAGTGGAGTCTCTTAAATATCACAGCGAACGCTTAGCAATTGTCTTTGCATTGATCAGTACACCGGAAGGATCACCGATAGTGGTGATGAAGAACTTGCGAGCTTGCAGAGACTGCCATGCTGCAATCAAGGTGATGACAAAGATTGTTGGGAGGGAAATAACAGTTCGAGACTCAAGCAGGTTCCATCATTTTAGAGATGGGCTTTGCTCCTGTGGGGACTTTTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

824

Amino Acids

92.95

Weight (kDa)

7.77

Isoelectric Point (pI)

36.78

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010155)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02010
malus_domestica	MD09G1003500.v1.1
prunus_persica	Prupe.3G313000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0139751
rosa_laevigata	RLG00000019830
rosa_multiflora	Rmu_co8047706.1_g000001 Rmu_sc0009714.1_g000012
rosa_roxburghii	Rroxscaffold_2G00105230
rosa_rugosa	Rorug02G0359700 Rorug02G0359800 Rorug02G0359900 Rorug04G0363900
rosa_samantha	Rh2AG409400 Rh2AG409500 Rh2BG419800 Rh2BG419900 Rh2CG395700 Rh2CG395800 Rh2DG429300 Rh4CG451800
rosa_wichuraiana	Rw2G033420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2051
Acc16I	TGCGCA	1 cut(s)	1325
Acc36I	ACCTGC	2 cut(s)	796, 2412
AccB7I	CCANNNNNTGG	2 cut(s)	592, 2138
AccBSI	CCGCTC	1 cut(s)	156
AccI	GTMKAC	1 cut(s)	607
AciI	CCGC	3 cut(s)	154, 335, 1269
AclI	AACGTT	1 cut(s)	639
AclWI	GGATC	3 cut(s)	134, 1105, 2320
AcsI	RAATTY	4 cut(s)	32, 1149, 1162, 1890
AcyI	GRCGYC	1 cut(s)	114
AdeI	CACNNNGTG	1 cut(s)	2138
AfaI	GTAC	5 cut(s)	331, 668, 1603, 2195, 2302
AfiI	CCNNNNNNNGG	5 cut(s)	334, 526, 592, 1120, 2138
AflII	CTTAAG	1 cut(s)	1369
AflIII	ACRYGT	2 cut(s)	846, 1977
AjiI	CACGTC	1 cut(s)	1226
AjnI	CCWGG	2 cut(s)	591, 1119
AjuI	GAANNNNNNNTTGG	4 cut(s)	1140, 1172, 1892, 1924
AluBI	AGCT	8 cut(s)	177, 1024, 1139, 1391, 1574, 1659, 1964, 2345
AluI	AGCT	8 cut(s)	177, 1024, 1139, 1391, 1574, 1659, 1964, 2345
Alw21I	GWGCWC	1 cut(s)	1471
Alw26I	GTCTC	6 cut(s)	250, 476, 1002, 2256, 2346, 2406
Alw44I	GTGCAC	1 cut(s)	1467
AlwI	GGATC	3 cut(s)	134, 1105, 2320
AlwNI	CAGNNNCTG	1 cut(s)	2355
AoxI	GGCC	1 cut(s)	1122
ApaLI	GTGCAC	1 cut(s)	1467
ApeKI	GCWGC	7 cut(s)	755, 802, 1922, 1961, 1964, 1994, 2363
ApoI	RAATTY	4 cut(s)	32, 1149, 1162, 1890
ArsI	GACNNNNNNTTYG	4 cut(s)	779, 811, 1481, 1513
Asp700I	GAANNNNTTC	2 cut(s)	848, 1046
AspLEI	GCGC	2 cut(s)	25, 1326
AspS9I	GGNCC	2 cut(s)	1497, 1948
AsuHPI	GGTGA	8 cut(s)	181, 203, 835, 1607, 2038, 2307, 2338, 2386
AsuII	TTCGAA	1 cut(s)	842
AvaII	GGWCC	2 cut(s)	1497, 1948
BaeGI	GKGCMC	2 cut(s)	1471, 2218
BanII	GRGCYC	1 cut(s)	1290
BbsI	GAAGAC	1 cut(s)	833
Bbv12I	GWGCWC	1 cut(s)	1471
BbvI	GCAGC	7 cut(s)	767, 814, 1934, 1951, 1973, 2006, 2350
BcgI	CGANNNNNNTGC	2 cut(s)	199, 233
BciT130I	CCWGG	2 cut(s)	593, 1121
BclI	TGATCA	2 cut(s)	1428, 2295
BcoDI	GTCTC	6 cut(s)	250, 476, 1002, 2256, 2346, 2406
BfaI	CTAG	2 cut(s)	300, 869
BfrI	CTTAAG	1 cut(s)	1369
BfuAI	ACCTGC	2 cut(s)	796, 2412
BisI	GCNGC	8 cut(s)	154, 756, 803, 1923, 1962, 1965, 1995, 2364
BlpI	GCTNAGC	1 cut(s)	2275
BlsI	GCNGC	8 cut(s)	155, 757, 804, 1924, 1963, 1966, 1996, 2365
Bme1390I	CCNGG	2 cut(s)	593, 1121
Bme18I	GGWCC	2 cut(s)	1497, 1948
BmgBI	CACGTC	1 cut(s)	1226
BmgT120I	GGNCC	2 cut(s)	1497, 1948
BmiI	GGNNCC	3 cut(s)	1289, 1498, 2426
BmrFI	CCNGG	2 cut(s)	593, 1121
BpiI	GAAGAC	1 cut(s)	833
Bpu10I	CCTNAGC	1 cut(s)	1664
Bpu1102I	GCTNAGC	1 cut(s)	2275
Bpu14I	TTCGAA	1 cut(s)	842
BpuEI	CTTGAG	2 cut(s)	186, 2401
BsaBI	GATNNNNATC	1 cut(s)	1444
BsaHI	GRCGYC	1 cut(s)	114
BsaI	GGTCTC	1 cut(s)	476
BsaJI	CCNNGG	3 cut(s)	1119, 1167, 1250
BsaWI	WCCGGW	1 cut(s)	2305
BsaXI	ACNNNNNCTCC	4 cut(s)	263, 293, 1709, 1739
Bsc4I	CCNNNNNNNGG	5 cut(s)	334, 526, 592, 1120, 2138
Bse1I	ACTGG	1 cut(s)	267
Bse3DI	GCAATG	2 cut(s)	863, 1071
Bse8I	GATNNNNATC	1 cut(s)	1444
BseBI	CCWGG	2 cut(s)	593, 1121
BseDI	CCNNGG	3 cut(s)	1119, 1167, 1250
BseGI	GGATG	5 cut(s)	473, 943, 985, 1445, 2236
BseJI	GATNNNNATC	1 cut(s)	1444
BseLI	CCNNNNNNNGG	5 cut(s)	334, 526, 592, 1120, 2138
BseMI	GCAATG	2 cut(s)	863, 1071
BseMII	CTCAG	4 cut(s)	618, 732, 1584, 1655
BseNI	ACTGG	1 cut(s)	267
BseRI	GAGGAG	3 cut(s)	68, 704, 2064
BseSI	GKGCMC	2 cut(s)	1471, 2218
BseXI	GCAGC	7 cut(s)	767, 814, 1934, 1951, 1973, 2006, 2350
BseYI	CCCAGC	1 cut(s)	1402
BsgI	GTGCAG	1 cut(s)	1263
BshFI	GGCC	1 cut(s)	1124
BsiHKAI	GWGCWC	1 cut(s)	1471
BsiSI	CCGG	4 cut(s)	282, 434, 2201, 2306
BslFI	GGGAC	2 cut(s)	1736, 2057
BslI	CCNNNNNNNGG	5 cut(s)	334, 526, 592, 1120, 2138
BsmAI	GTCTC	6 cut(s)	250, 476, 1002, 2256, 2346, 2406
BsmFI	GGGAC	2 cut(s)	1736, 2057
BsmI	GAATGC	2 cut(s)	865, 1564
BsnI	GGCC	1 cut(s)	1124
Bso31I	GGTCTC	1 cut(s)	476
Bsp119I	TTCGAA	1 cut(s)	842
Bsp1286I	GDGCHC	3 cut(s)	1290, 1471, 2218
Bsp143I	GATC	9 cut(s)	14, 139, 1003, 1110, 1428, 1566, 1610, 2295, 2312
Bsp1720I	GCTNAGC	1 cut(s)	2275
Bsp19I	CCATGG	1 cut(s)	1250
BspACI	CCGC	3 cut(s)	154, 335, 1269
BspANI	GGCC	1 cut(s)	1124
BspCNI	CTCAG	4 cut(s)	619, 733, 1583, 1656
BspLI	GGNNCC	3 cut(s)	1289, 1498, 2426
BspMI	ACCTGC	2 cut(s)	796, 2412
BspPI	GGATC	3 cut(s)	134, 1105, 2320
BspQI	GCTCTTC	1 cut(s)	167
BspT104I	TTCGAA	1 cut(s)	842
BspTI	CTTAAG	1 cut(s)	1369
BspTNI	GGTCTC	1 cut(s)	476
BsrBI	CCGCTC	1 cut(s)	156
BsrDI	GCAATG	2 cut(s)	863, 1071
BsrI	ACTGG	1 cut(s)	267
BssECI	CCNNGG	3 cut(s)	1119, 1167, 1250
BssMI	GATC	9 cut(s)	14, 139, 1003, 1110, 1428, 1566, 1610, 2295, 2312
BssNI	GRCGYC	1 cut(s)	114
BssT1I	CCWWGG	2 cut(s)	1167, 1250
Bst2UI	CCWGG	2 cut(s)	593, 1121
Bst6I	CTCTTC	3 cut(s)	167, 617, 2024
BstACI	GRCGYC	1 cut(s)	114
BstAFI	CTTAAG	1 cut(s)	1369
BstAPI	GCANNNNNTGC	1 cut(s)	2355
BstBI	TTCGAA	1 cut(s)	842
BstC8I	GCNNGC	5 cut(s)	208, 372, 1363, 2343, 2347
BstDEI	CTNAG	8 cut(s)	429, 627, 741, 1570, 1607, 1664, 1952, 2275
BstDSI	CCRYGG	1 cut(s)	1250
BstF5I	GGATG	5 cut(s)	473, 943, 985, 1445, 2236
BstHHI	GCGC	2 cut(s)	25, 1326
BstKTI	GATC	9 cut(s)	17, 142, 1006, 1113, 1431, 1569, 1613, 2298, 2315
BstMAI	GTCTC	6 cut(s)	250, 476, 1002, 2256, 2346, 2406
BstMBI	GATC	9 cut(s)	14, 139, 1003, 1110, 1428, 1566, 1610, 2295, 2312
BstMWI	GCNNNNNNNGC	9 cut(s)	1130, 1229, 1358, 1388, 1408, 1466, 1665, 1919, 2355
BstNI	CCWGG	2 cut(s)	593, 1121
BstNSI	RCATGY	1 cut(s)	1981
BstSCI	CCNGG	2 cut(s)	591, 1119
BstSLI	GKGCMC	2 cut(s)	1471, 2218
BstV1I	GCAGC	7 cut(s)	767, 814, 1934, 1951, 1973, 2006, 2350
BstV2I	GAAGAC	1 cut(s)	833
BstX2I	RGATCY	1 cut(s)	1110
BstXI	CCANNNNNNTGG	1 cut(s)	547
BstYI	RGATCY	1 cut(s)	1110
BsuRI	GGCC	1 cut(s)	1124
BtgI	CCRYGG	1 cut(s)	1250
BtgZI	GCGATG	2 cut(s)	572, 2051
BtrI	CACGTC	1 cut(s)	1226
BtsCI	GGATG	5 cut(s)	473, 943, 985, 1445, 2236
BtsI	GCAGTG	1 cut(s)	478
BtsIMutI	CAGTG	5 cut(s)	240, 478, 1659, 1687, 2118
BveI	ACCTGC	2 cut(s)	796, 2412
Cac8I	GCNNGC	5 cut(s)	208, 372, 1363, 2343, 2347
CaiI	CAGNNNCTG	1 cut(s)	2355
CfoI	GCGC	2 cut(s)	25, 1326
Cfr13I	GGNCC	2 cut(s)	1497, 1948
CseI	GACGC	1 cut(s)	122
Csp6I	GTAC	5 cut(s)	330, 667, 1602, 2194, 2301
CviQI	GTAC	5 cut(s)	330, 667, 1602, 2194, 2301
DdeI	CTNAG	8 cut(s)	429, 627, 741, 1570, 1607, 1664, 1952, 2275
DpnI	GATC	9 cut(s)	16, 141, 1005, 1112, 1430, 1568, 1612, 2297, 2314
DpnII	GATC	9 cut(s)	14, 139, 1003, 1110, 1428, 1566, 1610, 2295, 2312
DraI	TTTAAA	2 cut(s)	397, 991
DraIII	CACNNNGTG	1 cut(s)	2138
DrdI	GACNNNNNNGTC	1 cut(s)	2051
DseDI	GACNNNNNNGTC	1 cut(s)	2051
Eam1104I	CTCTTC	3 cut(s)	167, 617, 2024
EarI	CTCTTC	3 cut(s)	167, 617, 2024
Eco130I	CCWWGG	2 cut(s)	1167, 1250
Eco24I	GRGCYC	1 cut(s)	1290
Eco31I	GGTCTC	1 cut(s)	476
Eco32I	GATATC	1 cut(s)	533
Eco47I	GGWCC	2 cut(s)	1497, 1948
EcoRII	CCWGG	2 cut(s)	591, 1119
EcoRV	GATATC	1 cut(s)	533
EcoT14I	CCWWGG	2 cut(s)	1167, 1250
EcoT22I	ATGCAT	3 cut(s)	417, 655, 865
EcoT38I	GRGCYC	1 cut(s)	1290
ErhI	CCWWGG	2 cut(s)	1167, 1250
FalI	AAGNNNNNCTT	8 cut(s)	119, 151, 1287, 1319, 1497, 1529, 1590, 1622
FaqI	GGGAC	2 cut(s)	1736, 2057
FauNDI	CATATG	1 cut(s)	1273
FbaI	TGATCA	2 cut(s)	1428, 2295
FblI	GTMKAC	1 cut(s)	607
Fnu4HI	GCNGC	8 cut(s)	154, 756, 803, 1923, 1962, 1965, 1995, 2364
FokI	GGATG	5 cut(s)	480, 950, 992, 1432, 2243
FriOI	GRGCYC	1 cut(s)	1290
Fsp4HI	GCNGC	8 cut(s)	154, 756, 803, 1923, 1962, 1965, 1995, 2364
FspBI	CTAG	2 cut(s)	300, 869
FspI	TGCGCA	1 cut(s)	1325
GlaI	GCGC	2 cut(s)	24, 1325
GluI	GCNGC	8 cut(s)	154, 756, 803, 1923, 1962, 1965, 1995, 2364
GsaI	CCCAGC	1 cut(s)	1406
HaeIII	GGCC	1 cut(s)	1124
HapII	CCGG	4 cut(s)	282, 434, 2201, 2306
HgaI	GACGC	1 cut(s)	122
HhaI	GCGC	2 cut(s)	25, 1326
Hin1I	GRCGYC	1 cut(s)	114
Hin6I	GCGC	2 cut(s)	23, 1324
HinP1I	GCGC	2 cut(s)	23, 1324
HincII	GTYRAC	5 cut(s)	112, 277, 608, 2089, 2169
HindII	GTYRAC	5 cut(s)	112, 277, 608, 2089, 2169
HinfI	GANTC	9 cut(s)	40, 569, 609, 1142, 1649, 1900, 2052, 2249, 2414
HpaII	CCGG	4 cut(s)	282, 434, 2201, 2306
HphI	GGTGA	8 cut(s)	181, 203, 835, 1607, 2038, 2307, 2338, 2386
Hpy188I	TCNGA	5 cut(s)	55, 742, 1147, 1281, 1433
Hpy188III	TCNNGA	9 cut(s)	247, 465, 1001, 1343, 1526, 1663, 1904, 2056, 2411
HpyAV	CCTTC	7 cut(s)	747, 1592, 1700, 2167, 2183, 2228, 2303
HpyCH4IV	ACGT	5 cut(s)	108, 273, 639, 846, 1225
HpyF10VI	GCNNNNNNNGC	9 cut(s)	1130, 1229, 1358, 1388, 1408, 1466, 1665, 1919, 2355
HpyF3I	CTNAG	8 cut(s)	429, 627, 741, 1570, 1607, 1664, 1952, 2275
HpySE526I	ACGT	5 cut(s)	108, 273, 639, 846, 1225
Hsp92I	GRCGYC	1 cut(s)	114
HspAI	GCGC	2 cut(s)	23, 1324
Ksp22I	TGATCA	2 cut(s)	1428, 2295
Kzo9I	GATC	9 cut(s)	14, 139, 1003, 1110, 1428, 1566, 1610, 2295, 2312
LguI	GCTCTTC	1 cut(s)	167
LmnI	GCTCC	3 cut(s)	30, 1293, 2456
Lsp1109I	GCAGC	7 cut(s)	767, 814, 1934, 1951, 1973, 2006, 2350
MaeI	CTAG	2 cut(s)	300, 869
MaeII	ACGT	5 cut(s)	108, 273, 639, 846, 1225
MaeIII	GTNAC	9 cut(s)	269, 337, 442, 473, 640, 728, 1413, 1736, 2062
MalI	GATC	9 cut(s)	16, 141, 1005, 1112, 1430, 1568, 1612, 2297, 2314
MbiI	CCGCTC	1 cut(s)	156
MboI	GATC	9 cut(s)	14, 139, 1003, 1110, 1428, 1566, 1610, 2295, 2312
MboII	GAAGA	7 cut(s)	184, 604, 838, 1307, 2041, 2155, 2344
MfeI	CAATTG	1 cut(s)	2280
MflI	RGATCY	1 cut(s)	1110
MhlI	GDGCHC	3 cut(s)	1290, 1471, 2218
MlyI	GAGTC	5 cut(s)	34, 603, 2061, 2258, 2408
MmeI	TCCRAC	4 cut(s)	915, 1138, 1535, 1999
Mph1103I	ATGCAT	3 cut(s)	417, 655, 865
MroXI	GAANNNNTTC	2 cut(s)	848, 1046
MseI	TTAA	9 cut(s)	126, 396, 522, 699, 990, 1094, 1370, 1673, 2256
MslI	CAYNNNNRTG	1 cut(s)	545
MspA1I	CMGCKG	3 cut(s)	335, 1139, 1964
MspCI	CTTAAG	1 cut(s)	1369
MspI	CCGG	4 cut(s)	282, 434, 2201, 2306
MspR9I	CCNGG	2 cut(s)	593, 1121
MunI	CAATTG	1 cut(s)	2280
Mva1269I	GAATGC	2 cut(s)	865, 1564
MvaI	CCWGG	2 cut(s)	593, 1121
MwoI	GCNNNNNNNGC	9 cut(s)	1130, 1229, 1358, 1388, 1408, 1466, 1665, 1919, 2355
NcoI	CCATGG	1 cut(s)	1250
NdeI	CATATG	1 cut(s)	1273
NdeII	GATC	9 cut(s)	14, 139, 1003, 1110, 1428, 1566, 1610, 2295, 2312
NlaIV	GGNNCC	3 cut(s)	1289, 1498, 2426
NmeAIII	GCCGAG	1 cut(s)	433
NmuCI	GTSAC	2 cut(s)	442, 473
NsbI	TGCGCA	1 cut(s)	1325
NsiI	ATGCAT	3 cut(s)	417, 655, 865
NspI	RCATGY	1 cut(s)	1981
NspV	TTCGAA	1 cut(s)	842
PciI	ACATGT	1 cut(s)	1977
PciSI	GCTCTTC	1 cut(s)	167
PctI	GAATGC	2 cut(s)	865, 1564
PdmI	GAANNNNTTC	2 cut(s)	848, 1046
PfeI	GAWTC	4 cut(s)	569, 1142, 1649, 1900
PflMI	CCANNNNNTGG	2 cut(s)	592, 2138
PkrI	GCNGC	8 cut(s)	155, 757, 804, 1924, 1963, 1966, 1996, 2365
PleI	GAGTC	5 cut(s)	34, 603, 2060, 2257, 2408
PpsI	GAGTC	5 cut(s)	34, 603, 2060, 2257, 2408
PscI	ACATGT	1 cut(s)	1977
Psp1406I	AACGTT	1 cut(s)	639
Psp6I	CCWGG	2 cut(s)	591, 1119
PspFI	CCCAGC	1 cut(s)	1402
PspGI	CCWGG	2 cut(s)	591, 1119
PspN4I	GGNNCC	3 cut(s)	1289, 1498, 2426
PspPI	GGNCC	2 cut(s)	1497, 1948
PsrI	GAACNNNNNNTAC	2 cut(s)	489, 521
PstNI	CAGNNNCTG	1 cut(s)	2355
PsuI	RGATCY	1 cut(s)	1110
PvuII	CAGCTG	2 cut(s)	1139, 1964
RsaI	GTAC	5 cut(s)	331, 668, 1603, 2195, 2302
RsaNI	GTAC	5 cut(s)	330, 667, 1602, 2194, 2301
RseI	CAYNNNNRTG	1 cut(s)	545
SalI	GTCGAC	1 cut(s)	606
SapI	GCTCTTC	1 cut(s)	167
SaqAI	TTAA	9 cut(s)	126, 396, 522, 699, 990, 1094, 1370, 1673, 2256
SatI	GCNGC	8 cut(s)	154, 756, 803, 1923, 1962, 1965, 1995, 2364
Sau3AI	GATC	9 cut(s)	14, 139, 1003, 1110, 1428, 1566, 1610, 2295, 2312
Sau96I	GGNCC	2 cut(s)	1497, 1948
SchI	GAGTC	5 cut(s)	34, 603, 2061, 2258, 2408
ScrFI	CCNGG	2 cut(s)	593, 1121
SduI	GDGCHC	3 cut(s)	1290, 1471, 2218
SfuI	TTCGAA	1 cut(s)	842
SinI	GGWCC	2 cut(s)	1497, 1948
SmiMI	CAYNNNNRTG	1 cut(s)	545
SmlI	CTYRAG	3 cut(s)	201, 1369, 2416
SmoI	CTYRAG	3 cut(s)	201, 1369, 2416
SsiI	CCGC	3 cut(s)	154, 335, 1269
SspI	AATATT	1 cut(s)	1987
SspMI	CTAG	2 cut(s)	300, 869
StyD4I	CCNGG	2 cut(s)	591, 1119
StyI	CCWWGG	2 cut(s)	1167, 1250
TaiI	ACGT	5 cut(s)	111, 276, 642, 849, 1228
TaqI	TCGA	8 cut(s)	138, 219, 248, 607, 842, 1795, 1982, 2410
TaqII	GACCGA	1 cut(s)	1944
TatI	WGTACW	1 cut(s)	2300
TauI	GCSGC	1 cut(s)	156
TfiI	GAWTC	4 cut(s)	569, 1142, 1649, 1900
Tru1I	TTAA	9 cut(s)	126, 396, 522, 699, 990, 1094, 1370, 1673, 2256
Tru9I	TTAA	9 cut(s)	126, 396, 522, 699, 990, 1094, 1370, 1673, 2256
TscAI	CASTG	5 cut(s)	247, 478, 1659, 1694, 2118
TseFI	GTSAC	2 cut(s)	442, 473
TseI	GCWGC	7 cut(s)	755, 802, 1922, 1961, 1964, 1994, 2363
Tsp45I	GTSAC	2 cut(s)	442, 473
TspDTI	ATGAA	8 cut(s)	497, 800, 1308, 1517, 1827, 1869, 1883, 2345
TspGWI	ACGGA	1 cut(s)	1001
TspRI	CASTG	5 cut(s)	247, 478, 1659, 1694, 2118
Van91I	CCANNNNNTGG	2 cut(s)	592, 2138
Vha464I	CTTAAG	1 cut(s)	1369
VneI	GTGCAC	1 cut(s)	1467
VpaK11BI	GGWCC	2 cut(s)	1497, 1948
XapI	RAATTY	4 cut(s)	32, 1149, 1162, 1890
XceI	RCATGY	1 cut(s)	1981
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1543, 2135
XmiI	GTMKAC	1 cut(s)	607
XmnI	GAANNNNTTC	2 cut(s)	848, 1046
XspI	CTAG	2 cut(s)	300, 869
Zsp2I	ATGCAT	3 cut(s)	417, 655, 865

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.