Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0010155

Physical Location & Seq

Genomic Coordinates Forward (+)

326649 .. 328389

Gene Structure 1741 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1003500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1662 bp

ATGAGTCATATGACAGCATTTAGATCGGCAAATGCGCTCCTCAAAGTTAAAACTCCAACTCCAAGACCAAGAGTCCCTGACTCCCCAAAACCATTCCTTAATCCCAACCTCAACGCCCAAAACTCCGTTGATGCCCGTCTCATCAAGACGGGCTTCGATGCCCACACATGCCGGTCCAATTTTCTGGTCAAGAACTTCCTCAATCGAGGTGAATTGTCTCGAGCACGTCAACTGTTCGACCAAATGCCTCACAAAAACACCGTCTCCACAAACATGATGATTTCCAGTTACGTCAACTCCGGTAATCTTTCCAAGGCCAGAGAGTTGCTTGACACCATGGTTGACCGTACAGCGGTAACGTGGACCATACTAATAGGTGGTTTTTCCCAAGCTAATCGATACCATGAGGCATTTAAACTTTACGCCGACATGCACAGGTGGGGAACTAAGCCGGATTATGTGACTTTTGCTACTCTCCTGTCCGGATGCAGCGACATGGGAACCACCGAACAAGTAGTTCAAGTTCACTCACATGTCCTTAAGTTGGGATATGCTTCCACCCTCATGGTCTGCAATTCCTTGATTGATTCCTACTGCAAATCGCATCGCCTGGATTTAGCTTGTCGGCTCTTCAAGGAAATGCCCGAGAGAGATAATGTTACGTTCAATGCATTGATAACAGGATACTCAAAAGATAATTTGAATGAAGAGGCTGTAAACCTTTTTGCTCAAATGCAAAACTTGGGTCACAAGCCTTCAGAGTTCACTTTCGCAGCAGTACTTTGTGCCGGTATTAATTTAGACGACATAGCCTTTGGGCAGCAGGTTCACGGTTTTGTGGTGAAGACTAATTTTGTTTGGAACGTGTTCGTGGGGAATGCATTGCTCGATTTCTACTCAAAGCATGAGTCTTCGGTTGAAGCAAGGAAACTTTTCGATGAGATGCCAGAGTTGGATGGTATTTCTTACAATGTAATCATCACATCTCATGTGTGGGATGGGCAATTTAAAGAGTCTCTCGATCTTTTTCGTGAATTACAGTTAACTAAACATGACAGGAAGAAATTTCCTTTTCCAACCATGTTGAGCATCGCATCAAATACGCTGAACTTAAACATGGGTCGGCAGATCCATTCCCAGGCGATTATAGTAACAGCTGATTCAGAAATTCAGGTCGGAAATTCGTTGGTGGACATGTATGCCAAATGTGGCAGATTTGAGGAAGCCAAAAGGATATTCACAACTCTAGCTGACAGAAGTGCAGTTCCATGGACTGCAATGATATCCGGATACGCACAAAACGGGGTCCATGAGGAAGGCTTGGAACTGTTCAATGAGATGCGCAGAGCAAATGTTAGTCCGGACCAGGCTACTTTTGCTAGCATCTTAAGAGCCTCTGCGAGTTTAGCTTCCCTCTCGCTGGGAAAGCAGTTACACTCATCTGTGATCAAATTAGGATTCACATCCAATGTTTTTCCTGCAAGCGCACTCCTAGATATGTATGCAAAATGTGGTTCTATGAAAGACGCACTTCAATTTTTTCAAGAGATGCCCAAGAGGAATCGGGTCTGCTGGAATGCTCTGATCTCAGCTTATGCTCTAAATGGGGATGGCAAAGGCACTCTTAGATCATTCAAACAGATGCCACTGCGGGCTTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

554

Amino Acids

61.92

Weight (kDa)

8.85

Isoelectric Point (pI)

35.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	117 - 164	1.8e-14	PPR repeat family
PPR	PF01535	119 - 148	3.4e-06	PPR repeat
PPR_2	PF13041	190 - 217	7.7e-06	PPR repeat family
PPR	PF01535	191 - 217	4e-06	PPR repeat
PPR_1	PF12854	192 - 214	1e-05	PPR repeat
PPR_2	PF13041	218 - 261	7.7e-11	PPR repeat family
PPR	PF01535	220 - 249	3.9e-06	PPR repeat
PPR_2	PF13041	421 - 465	8e-11	PPR repeat family
PPR	PF01535	423 - 452	2.8e-08	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010155)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02010
malus_domestica	MD09G1003500.v1.1
prunus_persica	Prupe.3G313000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0139751
rosa_laevigata	RLG00000019830
rosa_multiflora	Rmu_co8047706.1_g000001 Rmu_sc0009714.1_g000012
rosa_roxburghii	Rroxscaffold_2G00105230
rosa_rugosa	Rorug02G0359700 Rorug02G0359800 Rorug02G0359900 Rorug04G0363900
rosa_samantha	Rh2AG409400 Rh2AG409500 Rh2BG419800 Rh2BG419900 Rh2CG395700 Rh2CG395800 Rh2DG429300 Rh4CG451800
rosa_wichuraiana	Rw2G033420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1343
Acc36I	ACCTGC	1 cut(s)	814
AccIII	TCCGGA	3 cut(s)	482, 1286, 1360
AciI	CCGC	2 cut(s)	353, 1651
AclWI	GGATC	1 cut(s)	1123
AcsI	RAATTY	3 cut(s)	1064, 1167, 1180
AcuI	CTGAAG	1 cut(s)	741
AfaI	GTAC	2 cut(s)	349, 780
AfiI	CCNNNNNNNGG	4 cut(s)	352, 544, 1138, 1420
AflII	CTTAAG	2 cut(s)	539, 1387
AflIII	ACRYGT	3 cut(s)	532, 864, 1194
AgsI	TTSAA	9 cut(s)	521, 634, 667, 703, 920, 1333, 1535, 1544, 1636
AhdI	GACNNNNNGTC	1 cut(s)	71
AjiI	CACGTC	1 cut(s)	227
AjnI	CCWGG	3 cut(s)	609, 1137, 1365
AjuI	GAANNNNNNNTTGG	2 cut(s)	1220, 1252
AluBI	AGCT	6 cut(s)	392, 620, 1157, 1250, 1409, 1592
AluI	AGCT	6 cut(s)	392, 620, 1157, 1250, 1409, 1592
Alw21I	GWGCWC	1 cut(s)	226
Alw26I	GTCTC	4 cut(s)	143, 222, 268, 1020
AlwI	GGATC	1 cut(s)	1123
Ama87I	CYCGRG	2 cut(s)	219, 644
Aor13HI	TCCGGA	3 cut(s)	482, 1286, 1360
AoxI	GGCC	1 cut(s)	315
ApeKI	GCWGC	3 cut(s)	489, 773, 820
ApoI	RAATTY	3 cut(s)	1064, 1167, 1180
ArsI	GACNNNNNNTTYG	8 cut(s)	246, 278, 730, 762, 797, 829, 893, 925
AseI	ATTAAT	1 cut(s)	795
Asp700I	GAANNNNTTC	2 cut(s)	866, 932
AspLEI	GCGC	3 cut(s)	37, 1344, 1487
AspS9I	GGNCC	4 cut(s)	174, 363, 1306, 1363
AsuHPI	GGTGA	2 cut(s)	221, 853
AsuNHI	GCTAGC	1 cut(s)	1379
AvaI	CYCGRG	2 cut(s)	219, 644
AvaII	GGWCC	4 cut(s)	174, 363, 1306, 1363
BbsI	GAAGAC	2 cut(s)	851, 903
Bbv12I	GWGCWC	1 cut(s)	226
BbvI	GCAGC	3 cut(s)	501, 785, 832
BccI	CCATC	3 cut(s)	950, 992, 1604
BcgI	CGANNNNNNTGC	2 cut(s)	6, 40
BciT130I	CCWGG	3 cut(s)	611, 1139, 1367
BciVI	GTATCC	2 cut(s)	677, 1283
BclI	TGATCA	1 cut(s)	1446
BcoDI	GTCTC	4 cut(s)	143, 222, 268, 1020
BfaI	CTAG	3 cut(s)	1247, 1380, 1493
BfrI	CTTAAG	2 cut(s)	539, 1387
BfuAI	ACCTGC	1 cut(s)	814
BfuI	GTATCC	2 cut(s)	677, 1283
BisI	GCNGC	3 cut(s)	490, 774, 821
BlsI	GCNGC	3 cut(s)	491, 775, 822
BmcAI	AGTACT	1 cut(s)	780
Bme1390I	CCNGG	3 cut(s)	611, 1139, 1367
Bme18I	GGWCC	4 cut(s)	174, 363, 1306, 1363
BmeRI	GACNNNNNGTC	1 cut(s)	71
BmeT110I	CYCGRG	2 cut(s)	219, 644
BmgBI	CACGTC	1 cut(s)	227
BmgT120I	GGNCC	4 cut(s)	174, 363, 1306, 1363
BmiI	GGNNCC	2 cut(s)	502, 1307
BmrFI	CCNGG	3 cut(s)	611, 1139, 1367
BmtI	GCTAGC	1 cut(s)	1383
BpiI	GAAGAC	2 cut(s)	851, 903
Bsa29I	ATCGAT	1 cut(s)	397
BsaBI	GATNNNNATC	1 cut(s)	1462
BsaJI	CCNNGG	4 cut(s)	312, 336, 1137, 1268
BsaWI	WCCGGW	4 cut(s)	299, 482, 1286, 1360
BsaXI	ACNNNNNCTCC	6 cut(s)	43, 73, 248, 278, 281, 311
Bsc4I	CCNNNNNNNGG	4 cut(s)	352, 544, 1138, 1420
Bse118I	RCCGGY	2 cut(s)	171, 788
Bse1I	ACTGG	1 cut(s)	285
Bse3DI	GCAATG	2 cut(s)	881, 1284
Bse8I	GATNNNNATC	1 cut(s)	1462
BseAI	TCCGGA	3 cut(s)	482, 1286, 1360
BseBI	CCWGG	3 cut(s)	611, 1139, 1367
BseCI	ATCGAT	1 cut(s)	397
BseDI	CCNNGG	4 cut(s)	312, 336, 1137, 1268
BseGI	GGATG	5 cut(s)	491, 961, 1003, 1463, 1615
BseJI	GATNNNNATC	1 cut(s)	1462
BseLI	CCNNNNNNNGG	4 cut(s)	352, 544, 1138, 1420
BseMI	GCAATG	2 cut(s)	881, 1284
BseMII	CTCAG	1 cut(s)	1602
BseNI	ACTGG	1 cut(s)	285
BseRI	GAGGAG	1 cut(s)	29
BseXI	GCAGC	3 cut(s)	501, 785, 832
BseYI	CCCAGC	1 cut(s)	1420
BsgI	GTGCAG	1 cut(s)	1281
BshFI	GGCC	1 cut(s)	317
BshVI	ATCGAT	1 cut(s)	397
BsiHKAI	GWGCWC	1 cut(s)	226
BsiHKCI	CYCGRG	2 cut(s)	219, 644
BsiSI	CCGG	7 cut(s)	172, 300, 452, 483, 789, 1287, 1361
BslFI	GGGAC	1 cut(s)	59
BslI	CCNNNNNNNGG	4 cut(s)	352, 544, 1138, 1420
BsmAI	GTCTC	4 cut(s)	143, 222, 268, 1020
BsmBI	CGTCTC	2 cut(s)	143, 268
BsmFI	GGGAC	1 cut(s)	59
BsmI	GAATGC	2 cut(s)	883, 1582
BsnI	GGCC	1 cut(s)	317
BsoBI	CYCGRG	2 cut(s)	219, 644
Bsp1286I	GDGCHC	1 cut(s)	226
Bsp13I	TCCGGA	3 cut(s)	482, 1286, 1360
Bsp143I	GATC	6 cut(s)	23, 1021, 1128, 1446, 1584, 1628
Bsp19I	CCATGG	2 cut(s)	336, 1268
BspACI	CCGC	2 cut(s)	353, 1651
BspANI	GGCC	1 cut(s)	317
BspCNI	CTCAG	1 cut(s)	1601
BspDI	ATCGAT	1 cut(s)	397
BspEI	TCCGGA	3 cut(s)	482, 1286, 1360
BspLI	GGNNCC	2 cut(s)	502, 1307
BspMI	ACCTGC	1 cut(s)	814
BspOI	GCTAGC	1 cut(s)	1383
BspPI	GGATC	1 cut(s)	1123
BspQI	GCTCTTC	1 cut(s)	635
BspTI	CTTAAG	2 cut(s)	539, 1387
BsrDI	GCAATG	2 cut(s)	881, 1284
BsrFI	RCCGGY	2 cut(s)	171, 788
BsrI	ACTGG	1 cut(s)	285
BssAI	RCCGGY	2 cut(s)	171, 788
BssECI	CCNNGG	4 cut(s)	312, 336, 1137, 1268
BssMI	GATC	6 cut(s)	23, 1021, 1128, 1446, 1584, 1628
BssT1I	CCWWGG	3 cut(s)	312, 336, 1268
Bst2UI	CCWGG	3 cut(s)	611, 1139, 1367
Bst4CI	ACNGT	6 cut(s)	234, 262, 347, 833, 1041, 1329
Bst6I	CTCTTC	2 cut(s)	635, 702
BstAFI	CTTAAG	2 cut(s)	539, 1387
BstC8I	GCNNGC	3 cut(s)	1381, 1483, 1653
BstDEI	CTNAG	3 cut(s)	447, 1588, 1625
BstDSI	CCRYGG	2 cut(s)	336, 1268
BstF5I	GGATG	5 cut(s)	491, 961, 1003, 1463, 1615
BstHHI	GCGC	3 cut(s)	37, 1344, 1487
BstKTI	GATC	6 cut(s)	26, 1024, 1131, 1449, 1587, 1631
BstMAI	GTCTC	4 cut(s)	143, 222, 268, 1020
BstMBI	GATC	6 cut(s)	23, 1021, 1128, 1446, 1584, 1628
BstMWI	GCNNNNNNNGC	3 cut(s)	1376, 1406, 1426
BstNI	CCWGG	3 cut(s)	611, 1139, 1367
BstNSI	RCATGY	4 cut(s)	171, 433, 536, 1198
BstSCI	CCNGG	3 cut(s)	609, 1137, 1365
BstV1I	GCAGC	3 cut(s)	501, 785, 832
BstV2I	GAAGAC	2 cut(s)	851, 903
BstX2I	RGATCY	1 cut(s)	1128
BstXI	CCANNNNNNTGG	2 cut(s)	184, 565
BstYI	RGATCY	1 cut(s)	1128
Bsu15I	ATCGAT	1 cut(s)	397
BsuI	GTATCC	2 cut(s)	677, 1283
BsuRI	GGCC	1 cut(s)	317
BsuTUI	ATCGAT	1 cut(s)	397
BtgI	CCRYGG	2 cut(s)	336, 1268
BtgZI	GCGATG	2 cut(s)	590, 1075
BtrI	CACGTC	1 cut(s)	227
BtsCI	GGATG	5 cut(s)	491, 961, 1003, 1463, 1615
BtsI	GCAGTG	1 cut(s)	1646
BtsIMutI	CAGTG	1 cut(s)	1646
BveI	ACCTGC	1 cut(s)	814
Cac8I	GCNNGC	3 cut(s)	1381, 1483, 1653
CfoI	GCGC	3 cut(s)	37, 1344, 1487
Cfr10I	RCCGGY	2 cut(s)	171, 788
Cfr13I	GGNCC	4 cut(s)	174, 363, 1306, 1363
ClaI	ATCGAT	1 cut(s)	397
CseI	GACGC	1 cut(s)	1535
Csp6I	GTAC	2 cut(s)	348, 779
CviQI	GTAC	2 cut(s)	348, 779
DdeI	CTNAG	3 cut(s)	447, 1588, 1625
DpnI	GATC	6 cut(s)	25, 1023, 1130, 1448, 1586, 1630
DpnII	GATC	6 cut(s)	23, 1021, 1128, 1446, 1584, 1628
DraI	TTTAAA	2 cut(s)	415, 1009
DriI	GACNNNNNGTC	1 cut(s)	71
Eam1104I	CTCTTC	2 cut(s)	635, 702
Eam1105I	GACNNNNNGTC	1 cut(s)	71
EarI	CTCTTC	2 cut(s)	635, 702
Eco130I	CCWWGG	3 cut(s)	312, 336, 1268
Eco32I	GATATC	1 cut(s)	1284
Eco47I	GGWCC	4 cut(s)	174, 363, 1306, 1363
Eco57I	CTGAAG	1 cut(s)	741
Eco88I	CYCGRG	2 cut(s)	219, 644
EcoRII	CCWGG	3 cut(s)	609, 1137, 1365
EcoRV	GATATC	1 cut(s)	1284
EcoT14I	CCWWGG	3 cut(s)	312, 336, 1268
EcoT22I	ATGCAT	2 cut(s)	673, 883
ErhI	CCWWGG	3 cut(s)	312, 336, 1268
Esp3I	CGTCTC	2 cut(s)	143, 268
FalI	AAGNNNNNCTT	6 cut(s)	137, 169, 1515, 1547, 1608, 1640
FaqI	GGGAC	1 cut(s)	59
FauI	CCCGC	1 cut(s)	1644
FauNDI	CATATG	1 cut(s)	9
FbaI	TGATCA	1 cut(s)	1446
Fnu4HI	GCNGC	3 cut(s)	490, 774, 821
FokI	GGATG	5 cut(s)	498, 968, 1010, 1450, 1622
Fsp4HI	GCNGC	3 cut(s)	490, 774, 821
FspBI	CTAG	3 cut(s)	1247, 1380, 1493
FspI	TGCGCA	1 cut(s)	1343
GlaI	GCGC	3 cut(s)	36, 1343, 1486
GluI	GCNGC	3 cut(s)	490, 774, 821
GsaI	CCCAGC	1 cut(s)	1424
HaeIII	GGCC	1 cut(s)	317
HapII	CCGG	7 cut(s)	172, 300, 452, 483, 789, 1287, 1361
HgaI	GACGC	1 cut(s)	1535
HhaI	GCGC	3 cut(s)	37, 1344, 1487
Hin6I	GCGC	3 cut(s)	35, 1342, 1485
HinP1I	GCGC	3 cut(s)	35, 1342, 1485
HincII	GTYRAC	4 cut(s)	230, 295, 343, 1044
HindII	GTYRAC	4 cut(s)	230, 295, 343, 1044
HinfI	GANTC	9 cut(s)	4, 72, 80, 587, 908, 1013, 1160, 1458, 1561
HpaI	GTTAAC	1 cut(s)	1044
HpaII	CCGG	7 cut(s)	172, 300, 452, 483, 789, 1287, 1361
HphI	GGTGA	2 cut(s)	221, 853
Hpy188I	TCNGA	4 cut(s)	760, 1165, 1178, 1584
Hpy188III	TCNNGA	9 cut(s)	145, 190, 219, 483, 1019, 1031, 1287, 1361, 1544
HpyAV	CCTTC	2 cut(s)	765, 1310
HpyCH4III	ACNGT	6 cut(s)	234, 262, 347, 833, 1041, 1329
HpyCH4IV	ACGT	5 cut(s)	226, 291, 359, 662, 864
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1376, 1406, 1426
HpyF3I	CTNAG	3 cut(s)	447, 1588, 1625
HpySE526I	ACGT	5 cut(s)	226, 291, 359, 662, 864
HspAI	GCGC	3 cut(s)	35, 1342, 1485
Kpn2I	TCCGGA	3 cut(s)	482, 1286, 1360
Ksp22I	TGATCA	1 cut(s)	1446
KspAI	GTTAAC	1 cut(s)	1044
Kzo9I	GATC	6 cut(s)	23, 1021, 1128, 1446, 1584, 1628
LguI	GCTCTTC	1 cut(s)	635
LmnI	GCTCC	1 cut(s)	42
Lsp1109I	GCAGC	3 cut(s)	501, 785, 832
MaeI	CTAG	3 cut(s)	1247, 1380, 1493
MaeII	ACGT	5 cut(s)	226, 291, 359, 662, 864
MaeIII	GTNAC	7 cut(s)	287, 355, 460, 658, 746, 1150, 1431
MalI	GATC	6 cut(s)	25, 1023, 1130, 1448, 1586, 1630
MboI	GATC	6 cut(s)	23, 1021, 1128, 1446, 1584, 1628
MboII	GAAGA	5 cut(s)	622, 719, 856, 903, 1072
MflI	RGATCY	1 cut(s)	1128
MhlI	GDGCHC	1 cut(s)	226
MlyI	GAGTC	5 cut(s)	13, 74, 81, 917, 1022
MmeI	TCCRAC	4 cut(s)	80, 933, 1100, 1156
Mph1103I	ATGCAT	2 cut(s)	673, 883
MroI	TCCGGA	3 cut(s)	482, 1286, 1360
MroXI	GAANNNNTTC	2 cut(s)	866, 932
MseI	TTAA	9 cut(s)	48, 99, 414, 540, 795, 1008, 1043, 1112, 1388
MslI	CAYNNNNRTG	3 cut(s)	272, 531, 563
MspA1I	CMGCKG	2 cut(s)	353, 1157
MspCI	CTTAAG	2 cut(s)	539, 1387
MspI	CCGG	7 cut(s)	172, 300, 452, 483, 789, 1287, 1361
MspR9I	CCNGG	3 cut(s)	611, 1139, 1367
Mva1269I	GAATGC	2 cut(s)	883, 1582
MvaI	CCWGG	3 cut(s)	611, 1139, 1367
MwoI	GCNNNNNNNGC	3 cut(s)	1376, 1406, 1426
NcoI	CCATGG	2 cut(s)	336, 1268
NdeI	CATATG	1 cut(s)	9
NdeII	GATC	6 cut(s)	23, 1021, 1128, 1446, 1584, 1628
NheI	GCTAGC	1 cut(s)	1379
NlaIV	GGNNCC	2 cut(s)	502, 1307
NmuCI	GTSAC	2 cut(s)	460, 746
NsbI	TGCGCA	1 cut(s)	1343
NsiI	ATGCAT	2 cut(s)	673, 883
NspI	RCATGY	4 cut(s)	171, 433, 536, 1198
PaeR7I	CTCGAG	1 cut(s)	219
PciI	ACATGT	2 cut(s)	532, 1194
PciSI	GCTCTTC	1 cut(s)	635
PctI	GAATGC	2 cut(s)	883, 1582
PdmI	GAANNNNTTC	2 cut(s)	866, 932
PfeI	GAWTC	4 cut(s)	587, 1160, 1458, 1561
PkrI	GCNGC	3 cut(s)	491, 775, 822
PleI	GAGTC	5 cut(s)	12, 74, 80, 916, 1021
PpsI	GAGTC	5 cut(s)	12, 74, 80, 916, 1021
PscI	ACATGT	2 cut(s)	532, 1194
PshBI	ATTAAT	1 cut(s)	795
Psp6I	CCWGG	3 cut(s)	609, 1137, 1365
PspFI	CCCAGC	1 cut(s)	1420
PspGI	CCWGG	3 cut(s)	609, 1137, 1365
PspN4I	GGNNCC	2 cut(s)	502, 1307
PspPI	GGNCC	4 cut(s)	174, 363, 1306, 1363
PsrI	GAACNNNNNNTAC	2 cut(s)	507, 539
PsuI	RGATCY	1 cut(s)	1128
PvuII	CAGCTG	1 cut(s)	1157
RsaI	GTAC	2 cut(s)	349, 780
RsaNI	GTAC	2 cut(s)	348, 779
RseI	CAYNNNNRTG	3 cut(s)	272, 531, 563
SapI	GCTCTTC	1 cut(s)	635
SaqAI	TTAA	9 cut(s)	48, 99, 414, 540, 795, 1008, 1043, 1112, 1388
SatI	GCNGC	3 cut(s)	490, 774, 821
Sau3AI	GATC	6 cut(s)	23, 1021, 1128, 1446, 1584, 1628
Sau96I	GGNCC	4 cut(s)	174, 363, 1306, 1363
ScaI	AGTACT	1 cut(s)	780
SchI	GAGTC	5 cut(s)	13, 74, 81, 917, 1022
ScrFI	CCNGG	3 cut(s)	611, 1139, 1367
SduI	GDGCHC	1 cut(s)	226
Sfr274I	CTCGAG	1 cut(s)	219
SinI	GGWCC	4 cut(s)	174, 363, 1306, 1363
SlaI	CTCGAG	1 cut(s)	219
SmiMI	CAYNNNNRTG	3 cut(s)	272, 531, 563
SmlI	CTYRAG	3 cut(s)	219, 539, 1387
SmoI	CTYRAG	3 cut(s)	219, 539, 1387
SsiI	CCGC	2 cut(s)	353, 1651
SspMI	CTAG	3 cut(s)	1247, 1380, 1493
StyD4I	CCNGG	3 cut(s)	609, 1137, 1365
StyI	CCWWGG	3 cut(s)	312, 336, 1268
TaaI	ACNGT	6 cut(s)	234, 262, 347, 833, 1041, 1329
TaiI	ACGT	5 cut(s)	229, 294, 362, 665, 867
TaqI	TCGA	8 cut(s)	156, 205, 220, 237, 397, 888, 936, 1020
TatI	WGTACW	1 cut(s)	778
TfiI	GAWTC	4 cut(s)	587, 1160, 1458, 1561
Tru1I	TTAA	9 cut(s)	48, 99, 414, 540, 795, 1008, 1043, 1112, 1388
Tru9I	TTAA	9 cut(s)	48, 99, 414, 540, 795, 1008, 1043, 1112, 1388
TscAI	CASTG	1 cut(s)	1653
TseFI	GTSAC	2 cut(s)	460, 746
TseI	GCWGC	3 cut(s)	489, 773, 820
Tsp45I	GTSAC	2 cut(s)	460, 746
TspDTI	ATGAA	2 cut(s)	720, 1535
TspGWI	ACGGA	1 cut(s)	115
TspRI	CASTG	1 cut(s)	1653
Vha464I	CTTAAG	2 cut(s)	539, 1387
VpaK11BI	GGWCC	4 cut(s)	174, 363, 1306, 1363
VspI	ATTAAT	1 cut(s)	795
XapI	RAATTY	3 cut(s)	1064, 1167, 1180
XceI	RCATGY	4 cut(s)	171, 433, 536, 1198
XhoI	CTCGAG	1 cut(s)	219
XmnI	GAANNNNTTC	2 cut(s)	866, 932
XspI	CTAG	3 cut(s)	1247, 1380, 1493
ZrmI	AGTACT	1 cut(s)	780
Zsp2I	ATGCAT	2 cut(s)	673, 883

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.