No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G02010 |
| malus_domestica | MD09G1003500.v1.1 |
| prunus_persica | Prupe.3G313000_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0139751 |
| rosa_laevigata | RLG00000019830 |
| rosa_multiflora | Rmu_co8047706.1_g000001 Rmu_sc0009714.1_g000012 |
| rosa_roxburghii | Rroxscaffold_2G00105230 |
| rosa_rugosa | Rorug02G0359700 Rorug02G0359800 Rorug02G0359900 Rorug04G0363900 |
| rosa_samantha | Rh2AG409400 Rh2AG409500 Rh2BG419800 Rh2BG419900 Rh2CG395700 Rh2CG395800 Rh2DG429300 Rh4CG451800 |
| rosa_wichuraiana | Rw2G033420 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 328 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 109 |
| AgsI | TTSAA | 2 cut(s) | 127, 194 |
| AjnI | CCWGG | 1 cut(s) | 45 |
| Alw21I | GWGCWC | 1 cut(s) | 214 |
| AoxI | GGCC | 1 cut(s) | 163 |
| ApoI | RAATTY | 1 cut(s) | 328 |
| AspS9I | GGNCC | 1 cut(s) | 163 |
| Bbv12I | GWGCWC | 1 cut(s) | 214 |
| BccI | CCATC | 2 cut(s) | 227, 235 |
| BciT130I | CCWGG | 1 cut(s) | 47 |
| BfaI | CTAG | 1 cut(s) | 156 |
| Bme1390I | CCNGG | 1 cut(s) | 47 |
| BmgT120I | GGNCC | 1 cut(s) | 163 |
| BmrFI | CCNGG | 1 cut(s) | 47 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 109 |
| Bse1I | ACTGG | 1 cut(s) | 119 |
| BseBI | CCWGG | 1 cut(s) | 47 |
| BseGI | GGATG | 1 cut(s) | 219 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 109 |
| BseMII | CTCAG | 1 cut(s) | 220 |
| BseNI | ACTGG | 1 cut(s) | 119 |
| BshFI | GGCC | 1 cut(s) | 165 |
| BsiHKAI | GWGCWC | 1 cut(s) | 214 |
| BslFI | GGGAC | 1 cut(s) | 281 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 109 |
| BsmFI | GGGAC | 1 cut(s) | 281 |
| BsnI | GGCC | 1 cut(s) | 165 |
| Bsp1286I | GDGCHC | 1 cut(s) | 214 |
| BspANI | GGCC | 1 cut(s) | 165 |
| BspCNI | CTCAG | 1 cut(s) | 219 |
| BspHI | TCATGA | 1 cut(s) | 171 |
| BsrI | ACTGG | 1 cut(s) | 119 |
| Bst2UI | CCWGG | 1 cut(s) | 47 |
| Bst6I | CTCTTC | 1 cut(s) | 237 |
| BstC8I | GCNNGC | 1 cut(s) | 150 |
| BstDEI | CTNAG | 2 cut(s) | 38, 206 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 107 |
| BstF5I | GGATG | 1 cut(s) | 219 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 223 |
| BstNI | CCWGG | 1 cut(s) | 47 |
| BstNSI | RCATGY | 1 cut(s) | 152 |
| BstSCI | CCNGG | 1 cut(s) | 45 |
| BsuRI | GGCC | 1 cut(s) | 165 |
| BtsCI | GGATG | 1 cut(s) | 219 |
| BtsIMutI | CAGTG | 1 cut(s) | 214 |
| Cac8I | GCNNGC | 1 cut(s) | 150 |
| CciI | TCATGA | 1 cut(s) | 171 |
| Cfr13I | GGNCC | 1 cut(s) | 163 |
| CviAII | CATG | 3 cut(s) | 149, 172, 335 |
| CviJI | RGCY | 2 cut(s) | 165, 226 |
| CviKI_1 | RGCY | 2 cut(s) | 165, 226 |
| DdeI | CTNAG | 2 cut(s) | 38, 206 |
| Eam1104I | CTCTTC | 1 cut(s) | 237 |
| EarI | CTCTTC | 1 cut(s) | 237 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 107 |
| EcoO109I | RGGNCCY | 1 cut(s) | 163 |
| EcoRII | CCWGG | 1 cut(s) | 45 |
| FaeI | CATG | 3 cut(s) | 152, 175, 338 |
| FaqI | GGGAC | 1 cut(s) | 281 |
| FatI | CATG | 3 cut(s) | 148, 171, 334 |
| FokI | GGATG | 1 cut(s) | 206 |
| FspBI | CTAG | 1 cut(s) | 156 |
| HaeIII | GGCC | 1 cut(s) | 165 |
| Hin1II | CATG | 3 cut(s) | 152, 175, 338 |
| HinfI | GANTC | 1 cut(s) | 127 |
| Hpy188III | TCNNGA | 2 cut(s) | 131, 172 |
| HpyCH4V | TGCA | 3 cut(s) | 148, 152, 284 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 223 |
| HpyF3I | CTNAG | 2 cut(s) | 38, 206 |
| Hsp92II | CATG | 3 cut(s) | 152, 175, 338 |
| LpnPI | CCDG | 8 cut(s) | 32, 59, 95, 132, 179, 233, 236, 313 |
| MaeI | CTAG | 1 cut(s) | 156 |
| MaeIII | GTNAC | 1 cut(s) | 112 |
| MboII | GAAGA | 1 cut(s) | 224 |
| MfeI | CAATTG | 1 cut(s) | 321 |
| MhlI | GDGCHC | 1 cut(s) | 214 |
| MluCI | AATT | 2 cut(s) | 321, 328 |
| MnlI | CCTC | 4 cut(s) | 34, 113, 215, 296 |
| MspR9I | CCNGG | 1 cut(s) | 47 |
| MunI | CAATTG | 1 cut(s) | 321 |
| MvaI | CCWGG | 1 cut(s) | 47 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 223 |
| NlaIII | CATG | 3 cut(s) | 152, 175, 338 |
| NspI | RCATGY | 1 cut(s) | 152 |
| PaeI | GCATGC | 1 cut(s) | 152 |
| PagI | TCATGA | 1 cut(s) | 171 |
| PfeI | GAWTC | 1 cut(s) | 127 |
| Psp6I | CCWGG | 1 cut(s) | 45 |
| PspGI | CCWGG | 1 cut(s) | 45 |
| PspPI | GGNCC | 1 cut(s) | 163 |
| Sau96I | GGNCC | 1 cut(s) | 163 |
| ScrFI | CCNGG | 1 cut(s) | 47 |
| SduI | GDGCHC | 1 cut(s) | 214 |
| SetI | ASST | 2 cut(s) | 114, 307 |
| SphI | GCATGC | 1 cut(s) | 152 |
| Sse9I | AATT | 2 cut(s) | 321, 328 |
| SspI | AATATT | 2 cut(s) | 70, 183 |
| SspMI | CTAG | 1 cut(s) | 156 |
| StyD4I | CCNGG | 1 cut(s) | 45 |
| TaqI | TCGA | 1 cut(s) | 243 |
| TasI | AATT | 2 cut(s) | 321, 328 |
| TfiI | GAWTC | 1 cut(s) | 127 |
| TscAI | CASTG | 1 cut(s) | 214 |
| TspDTI | ATGAA | 2 cut(s) | 62, 160 |
| TspRI | CASTG | 1 cut(s) | 214 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 107 |
| XapI | RAATTY | 1 cut(s) | 328 |
| XceI | RCATGY | 1 cut(s) | 152 |
| XspI | CTAG | 1 cut(s) | 156 |