Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0015462

Physical Location & Seq

Genomic Coordinates Reverse (-)

473774 .. 476662

Gene Structure 2889 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G02330.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2712 bp

ATGGCGGAGAGTCTCAGATTATTGCATATGACCAGATCAGTGGTTTCATTCAATCGTTGTCTAACAGAGAAAATTTCATACCGGAGAGTTCCAAGCTTTTCTTATTTCACTGATTTTCTGAATCAAGTGAACTCAGTTAGCACGACGAACTTTTCGTTTGTTTTCAAGGAATGTGCGAAGCAAGGAGCGTTAGAGCTAGGCAAGCAAGCTCATGCTCATATGATAATATCTGGGTTTCGTCCGACTACATTCGTACTGAACTGTTTGCTGCAGGTCTACACAAATTCAAGAGATTTCGTGTCTGCTTCTATGGTGTTCGACAAAATGCCGCTGAGAGATGTTGTTTCTTGGAACAAAATGATAAATGGTTACTCGAAGAGTAATGACATGTTTAAAGCGAATTCTTTCTTCAATATGATGCCTGTGAGAGATGTTGTGTCTTGGAACTCAATGCTTTCTGGGTATCTGCAAAACGGCGAGAGTTTGAAATCTATCGAGGTTTTCGTTGACATGGGGAGAGAAGGTATTGAGTTTGACGGTAGAACTTTTGCAATTATTCTTAAAGTTTGTTCCTTTTTAGAGGATACCAGTTTAGGAATGCAGATTCATGGGATTGTCGTTCGAGTGGGTTGTGATACTGATGTGGTTGCTGCGAGTGCGTTGTTGGATATGTATGCAAAAGGCAAGAGGTTTGTCGAGTCTCTTAGAGTGTTTCAAGGTATACCAGAGAAGAATTCTGTCTCGTGGAGTGCTATAATCGCAGGTTGTGTTCAGAATAACTTGTTGTCCCTTGCTTTGAAGTTTTTCAAGGAGATGCAAAAGGTAAATGCTGGAGTGAGCCAGTCAATTTACGCTAGCGTCTTGAGGTCATGTGCTGCGTTATCCGAATTGAGGTTAGGCGGTCAGTTACATGCTCATGCCTTGAAGTCAGATTTTGCAGCAGATGGTATAGTGAGGACGGCGACATTGGACATGTACGCAAAGTGTGATAATATGCAAGATGCTCAAATTTTGTTTGACAACTCAGAAAATCTTAATAGGCAATCTTATAACGCAATGATTACTGGTTATTCGCAAGAAGAACATGGTTTCAAAGCTCTACTGTTGTTTCACCGACTCATGTCATCGGGTCTTGGTTTCGACGAGATAAGTTTATCAGGAGTATTCAGGGCTTGTGCCTTGGTGAAAGGACTTTCAGAGGGGCTTCAGATTTACGGTTTGGCGATAAAAAGCAGCTTATCGCTAGATGTTTGCGTTGCAAATGCTGCTATCGACATGTATGGGAAATGTCAAGCTCTGGCTGAAGCCTTTCGTGTATTCGATGAGATGAGAAGACGAGACGCTGTGTCTTGGAATGCGATTATAGCTGCACATGAGCAGAACGGAAAAGGATATGAAACGCTTTTTCTTTTTGTCTCGATGCTCCGTTCTAGGATCGAACCTGATGAGTTTACCTTTGGAAGCATATTGAAAGCTTGCACTGGTGGTTCTTTAGGTTACGGTATGGAGATCCATTCCAGCATTGTCAAATCAGGAATGGCTTCAAACTCCTCTGTCGGATGCTCTCTGATCGATATGTATTCAAAGTGTGGAATGATAGAAGAGGCGGAGAAGATACATAGTCGATTCTTTCAACGAGCCAATGTCTCGGGAACAATGGAAGAGCTTGAAAAGATGCACAATAAGAGACTGCAGGAAATGTGTGTTTCATGGAATTCAATTATTTCCGGATATGTAATGAAGGAACAAAGCGAGGATGCTCAGATGCTTTTTACCCGGATGATGGAGATGGGTATAACTCCTGACAAATTTACTTATGCAACAGTTCTTGATACCTGTGCGAATCTTGCTTCCGCTGGATTAGGTAAACAGATTCATGCTCAGGTCATCAAGAAAGAATTGCAATCTGATGTGTATATCTGTAGCACCCTCGTTGACATGTACTCGAAATGTGGAGATCTCCATGATTCAAGATTGATGTTTGAGAAGTCGCTGAGAAGAGATTTCGTGACCTGGAACGCCATGATTTGCGGGTATGCACATCATGGGAAAGGAGAGGAAGCTATACAACTGTTTGAGAGAATGATACTCGAAAACATCAAACCAAATCACGTTACTTTCATATCGATACTCCGAGCTTGTGCTCACATGGGTCTGATCGACAAAGGGCTCGAGTACTTCTATATGATGAAGAGAGACTATGGCCTGGATCCTCAGCTACCGCATTACTCGAACATGGTAGATATATTAGGAAAATCCGGAAAAGTCAAGAGAGCATTAGAGCTTATTCGAGAGATGCCATTTGAAGCAGACGATGTCATATGGAGAACCCTGTTAGGAGTCTGCACGATACATAGAAACAATGTAGAGGTTGCAGAAGAAGCAACTGCTGCCCTGTTGAGATTGGATCCACAAGACTCTTCAGCTTATACACTTTTATCAAATGTATACGCAGATGCAGGAATGTGGGAAAAGGTTTCAGATTTGAGGAGAAATATGAGAGGCTTTAAGCTTAAGAAGGAGCCTGGTTGCAGTTGGGTTGAGCTAAAAGATGAGCTTCATGTGTTTCTCGTTGGAGATAAGGCTCATCCTAGATGGGAAGAGATTTACGAAGAGCTTGGTTTGATTTACAGTGAAATGAAACCTTTTGATGATTCTTCTTTCGTGCGTGGGGTTGAAGTAGAAGAAGAGGACCAATGGTGTTACTGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016071 GO:0016553 GO:0016554 GO:0016556 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0097159 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

903

Amino Acids

101.71

Weight (kDa)

5.99

Isoelectric Point (pI)

43.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	143 - 190	2.4e-09	PPR repeat family
PPR	PF01535	146 - 176	6.8e-06	PPR repeat
PPR_2	PF13041	447 - 493	3.7e-08	PPR repeat family
PPR_2	PF13041	569 - 615	1.9e-11	PPR repeat family
PPR_3	PF13812	662 - 715	1.3e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	668 - 716	6.9e-14	PPR repeat family
PPR	PF01535	670 - 699	3.2e-09	PPR repeat
E_motif	PF20431	787 - 848	1e-20	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0015462)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02330
fragaria_vesca	FvH4_6g28230
malus_domestica	MD09G1077900.v1.1 MD17G1068000.v1.1
prunus_persica	Prupe.3G143100_v2.0.a1
pyrus_communis	pycom17g06860
rosa_chinensis	RchiOBHm_Chr2g0164271
rosa_laevigata	RLG00000021450
rosa_multiflora	Rmu_sc0007154.1_g000008
rosa_roxburghii	Rroxscaffold_2G00086650
rosa_rugosa	Rorug02G0507700
rosa_samantha	Rh2AG575700 Rh2BG586800 Rh2CG557300 Rh2DG596100
rosa_wichuraiana	Rw2G047670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1050
Acc36I	ACCTGC	2 cut(s)	262, 752
AccI	GTMKAC	3 cut(s)	276, 721, 2448
AccIII	TCCGGA	2 cut(s)	1727, 2258
AciI	CCGC	7 cut(s)	5, 329, 900, 1607, 1854, 2031, 2222
AclWI	GGATC	6 cut(s)	1442, 1504, 2204, 2217, 2402, 2415
AcsI	RAATTY	7 cut(s)	72, 283, 400, 733, 1008, 1714, 1808
AcuI	CTGAAG	3 cut(s)	1190, 1323, 2406
AfaI	GTAC	4 cut(s)	255, 977, 1943, 2177
AfiI	CCNNNNNNNGG	2 cut(s)	891, 1783
AflII	CTTAAG	1 cut(s)	2513
AflIII	ACRYGT	4 cut(s)	387, 972, 1275, 1938
AhdI	GACNNNNNGTC	1 cut(s)	1345
AjnI	CCWGG	3 cut(s)	2012, 2205, 2524
Alw21I	GWGCWC	1 cut(s)	2146
Alw26I	GTCTC	8 cut(s)	17, 705, 745, 1332, 1420, 1651, 1681, 2190
AlwI	GGATC	6 cut(s)	1442, 1504, 2204, 2217, 2402, 2415
Ama87I	CYCGRG	2 cut(s)	1648, 2171
Aor13HI	TCCGGA	2 cut(s)	1727, 2258
AoxI	GGCC	1 cut(s)	2203
ApeKI	GCWGC	8 cut(s)	268, 650, 875, 938, 1233, 1265, 1367, 2390
ApoI	RAATTY	7 cut(s)	72, 283, 400, 733, 1008, 1714, 1808
ArsI	GACNNNNNNTTYG	2 cut(s)	136, 168
Asp700I	GAANNNNTTC	4 cut(s)	404, 803, 1308, 1540
AspS9I	GGNCC	1 cut(s)	2692
AsuC2I	CCSGG	1 cut(s)	1777
AsuHPI	GGTGA	2 cut(s)	1103, 1195
AsuNHI	GCTAGC	1 cut(s)	854
AvaI	CYCGRG	2 cut(s)	1648, 2171
AvaII	GGWCC	1 cut(s)	2692
BaeI	ACNNNNGTAYC	2 cut(s)	627, 660
BamHI	GGATCC	2 cut(s)	2209, 2407
BanII	GRGCYC	1 cut(s)	2172
BauI	CACGAG	1 cut(s)	742
BbsI	GAAGAC	1 cut(s)	1339
Bbv12I	GWGCWC	1 cut(s)	2146
BbvCI	CCTCAGC	1 cut(s)	2214
BbvI	GCAGC	8 cut(s)	255, 637, 862, 950, 1245, 1252, 1354, 2377
BccI	CCATC	4 cut(s)	938, 1777, 1783, 2589
BceAI	ACGGC	2 cut(s)	490, 975
BciT130I	CCWGG	3 cut(s)	2014, 2207, 2526
BciVI	GTATCC	1 cut(s)	577
BcnI	CCSGG	1 cut(s)	1777
BcoDI	GTCTC	8 cut(s)	17, 705, 745, 1332, 1420, 1651, 1681, 2190
BfaI	CTAG	5 cut(s)	197, 855, 1244, 1431, 2592
BfmI	CTRYAG	3 cut(s)	269, 1691, 1921
BfrI	CTTAAG	1 cut(s)	2513
BfuAI	ACCTGC	2 cut(s)	262, 752
BfuI	GTATCC	1 cut(s)	577
BglII	AGATCT	1 cut(s)	1957
BisI	GCNGC	9 cut(s)	269, 329, 651, 876, 939, 1234, 1266, 1368, 2391
BlsI	GCNGC	9 cut(s)	270, 330, 652, 877, 940, 1235, 1267, 1369, 2392
BmcAI	AGTACT	1 cut(s)	2177
Bme1390I	CCNGG	4 cut(s)	1777, 2014, 2207, 2526
Bme18I	GGWCC	1 cut(s)	2692
BmeRI	GACNNNNNGTC	1 cut(s)	1345
BmeT110I	CYCGRG	2 cut(s)	1648, 2171
BmgT120I	GGNCC	1 cut(s)	2692
BmiI	GGNNCC	3 cut(s)	2211, 2409, 2523
BmrFI	CCNGG	4 cut(s)	1777, 2014, 2207, 2526
BmtI	GCTAGC	1 cut(s)	858
BoxI	GACNNNNGTC	1 cut(s)	1120
BpiI	GAAGAC	1 cut(s)	1339
BpmI	CTGGAG	1 cut(s)	852
Bpu10I	CCTNAGC	2 cut(s)	1881, 2214
BpuEI	CTTGAG	1 cut(s)	883
BpuMI	CCSGG	1 cut(s)	1777
Bsa29I	ATCGAT	2 cut(s)	1572, 2126
BsaJI	CCNNGG	1 cut(s)	1179
BsaWI	WCCGGW	3 cut(s)	81, 1727, 2258
BsaXI	ACNNNNNCTCC	2 cut(s)	508, 538
Bsc4I	CCNNNNNNNGG	2 cut(s)	891, 1783
Bse1I	ACTGG	4 cut(s)	588, 841, 1069, 1486
Bse3DI	GCAATG	1 cut(s)	1062
BseAI	TCCGGA	2 cut(s)	1727, 2258
BseBI	CCWGG	3 cut(s)	2014, 2207, 2526
BseCI	ATCGAT	2 cut(s)	1572, 2126
BseDI	CCNNGG	1 cut(s)	1179
BseGI	GGATG	4 cut(s)	1565, 1762, 1785, 2587
BseLI	CCNNNNNNNGG	2 cut(s)	891, 1783
BseMI	GCAATG	1 cut(s)	1062
BseMII	CTCAG	8 cut(s)	28, 147, 323, 1038, 1775, 1895, 1985, 2228
BseNI	ACTGG	4 cut(s)	588, 841, 1069, 1486
BseRI	GAGGAG	2 cut(s)	1540, 2503
BseXI	GCAGC	8 cut(s)	255, 637, 862, 950, 1245, 1252, 1354, 2377
BsgI	GTGCAG	2 cut(s)	1353, 2329
BshFI	GGCC	1 cut(s)	2205
BshVI	ATCGAT	2 cut(s)	1572, 2126
BsiHKAI	GWGCWC	1 cut(s)	2146
BsiHKCI	CYCGRG	2 cut(s)	1648, 2171
BsiSI	CCGG	4 cut(s)	82, 1728, 1777, 2259
BslFI	GGGAC	1 cut(s)	772
BslI	CCNNNNNNNGG	2 cut(s)	891, 1783
BsmAI	GTCTC	8 cut(s)	17, 705, 745, 1332, 1420, 1651, 1681, 2190
BsmBI	CGTCTC	1 cut(s)	1332
BsmFI	GGGAC	1 cut(s)	772
BsmI	GAATGC	2 cut(s)	603, 1360
BsnI	GGCC	1 cut(s)	2205
BsoBI	CYCGRG	2 cut(s)	1648, 2171
Bsp1286I	GDGCHC	2 cut(s)	2146, 2172
Bsp13I	TCCGGA	2 cut(s)	1727, 2258
Bsp143I	GATC	8 cut(s)	35, 1434, 1509, 1569, 1957, 2157, 2209, 2407
BspACI	CCGC	7 cut(s)	5, 329, 900, 1607, 1854, 2031, 2222
BspANI	GGCC	1 cut(s)	2205
BspCNI	CTCAG	8 cut(s)	27, 146, 324, 1037, 1774, 1894, 1986, 2227
BspDI	ATCGAT	2 cut(s)	1572, 2126
BspEI	TCCGGA	2 cut(s)	1727, 2258
BspLI	GGNNCC	3 cut(s)	2211, 2409, 2523
BspMAI	CTGCAG	2 cut(s)	273, 1695
BspMI	ACCTGC	2 cut(s)	262, 752
BspOI	GCTAGC	1 cut(s)	858
BspPI	GGATC	6 cut(s)	1442, 1504, 2204, 2217, 2402, 2415
BspQI	GCTCTTC	2 cut(s)	1656, 2607
BspTI	CTTAAG	1 cut(s)	2513
BsrDI	GCAATG	1 cut(s)	1062
BsrI	ACTGG	4 cut(s)	588, 841, 1069, 1486
BssECI	CCNNGG	1 cut(s)	1179
BssMI	GATC	8 cut(s)	35, 1434, 1509, 1569, 1957, 2157, 2209, 2407
BssNAI	GTATAC	2 cut(s)	722, 2449
BssSI	CACGAG	1 cut(s)	742
BssT1I	CCWWGG	1 cut(s)	1179
Bst1107I	GTATAC	2 cut(s)	722, 2449
Bst2BI	CACGAG	1 cut(s)	742
Bst2UI	CCWGG	3 cut(s)	2014, 2207, 2526
Bst4CI	ACNGT	8 cut(s)	263, 539, 1104, 1217, 1502, 1825, 2073, 2633
Bst6I	CTCTTC	9 cut(s)	371, 1596, 1656, 1993, 2186, 2425, 2595, 2607, 2682
BstAFI	CTTAAG	1 cut(s)	2513
BstAPI	GCANNNNNTGC	2 cut(s)	1265, 2390
BstC8I	GCNNGC	4 cut(s)	203, 207, 856, 1477
BstDEI	CTNAG	9 cut(s)	14, 133, 332, 704, 1024, 1761, 1881, 1994, 2214
BstF5I	GGATG	4 cut(s)	1565, 1762, 1785, 2587
BstKTI	GATC	8 cut(s)	38, 1437, 1512, 1572, 1960, 2160, 2212, 2410
BstMAI	GTCTC	8 cut(s)	17, 705, 745, 1332, 1420, 1651, 1681, 2190
BstMBI	GATC	8 cut(s)	35, 1434, 1509, 1569, 1957, 2157, 2209, 2407
BstMWI	GCNNNNNNNGC	8 cut(s)	202, 656, 758, 1265, 1364, 1847, 2381, 2390
BstNI	CCWGG	3 cut(s)	2014, 2207, 2526
BstNSI	RCATGY	5 cut(s)	391, 914, 976, 1279, 1942
BstPAI	GACNNNNGTC	1 cut(s)	1120
BstSCI	CCNGG	4 cut(s)	1775, 2012, 2205, 2524
BstSFI	CTRYAG	3 cut(s)	269, 1691, 1921
BstV1I	GCAGC	8 cut(s)	255, 637, 862, 950, 1245, 1252, 1354, 2377
BstV2I	GAAGAC	1 cut(s)	1339
BstX2I	RGATCY	4 cut(s)	1509, 1957, 2209, 2407
BstXI	CCANNNNNNTGG	1 cut(s)	40
BstYI	RGATCY	4 cut(s)	1509, 1957, 2209, 2407
BstZ17I	GTATAC	2 cut(s)	722, 2449
Bsu15I	ATCGAT	2 cut(s)	1572, 2126
BsuI	GTATCC	1 cut(s)	577
BsuRI	GGCC	1 cut(s)	2205
BsuTUI	ATCGAT	2 cut(s)	1572, 2126
BtsCI	GGATG	4 cut(s)	1565, 1762, 1785, 2587
BtsIMutI	CAGTG	4 cut(s)	45, 108, 1479, 2638
BveI	ACCTGC	2 cut(s)	262, 752
Cac8I	GCNNGC	4 cut(s)	203, 207, 856, 1477
Cfr13I	GGNCC	1 cut(s)	2692
ClaI	ATCGAT	2 cut(s)	1572, 2126
CseI	GACGC	2 cut(s)	847, 1349
Csp6I	GTAC	4 cut(s)	254, 976, 1942, 2176
CviQI	GTAC	4 cut(s)	254, 976, 1942, 2176
DdeI	CTNAG	9 cut(s)	14, 133, 332, 704, 1024, 1761, 1881, 1994, 2214
DpnI	GATC	8 cut(s)	37, 1436, 1511, 1571, 1959, 2159, 2211, 2409
DpnII	GATC	8 cut(s)	35, 1434, 1509, 1569, 1957, 2157, 2209, 2407
DraI	TTTAAA	1 cut(s)	394
DriI	GACNNNNNGTC	1 cut(s)	1345
Eam1104I	CTCTTC	9 cut(s)	371, 1596, 1656, 1993, 2186, 2425, 2595, 2607, 2682
Eam1105I	GACNNNNNGTC	1 cut(s)	1345
EarI	CTCTTC	9 cut(s)	371, 1596, 1656, 1993, 2186, 2425, 2595, 2607, 2682
EciI	GGCGGA	2 cut(s)	20, 1622
Eco130I	CCWWGG	1 cut(s)	1179
Eco24I	GRGCYC	1 cut(s)	2172
Eco47I	GGWCC	1 cut(s)	2692
Eco57I	CTGAAG	3 cut(s)	1190, 1323, 2406
Eco88I	CYCGRG	2 cut(s)	1648, 2171
EcoRI	GAATTC	3 cut(s)	400, 733, 1714
EcoRII	CCWGG	3 cut(s)	2012, 2205, 2524
EcoT14I	CCWWGG	1 cut(s)	1179
EcoT38I	GRGCYC	1 cut(s)	2172
ErhI	CCWWGG	1 cut(s)	1179
Esp3I	CGTCTC	1 cut(s)	1332
FalI	AAGNNNNNCTT	4 cut(s)	85, 117, 2541, 2573
FaqI	GGGAC	1 cut(s)	772
FauI	CCCGC	1 cut(s)	2024
FauNDI	CATATG	3 cut(s)	27, 219, 2321
FblI	GTMKAC	3 cut(s)	276, 721, 2448
Fnu4HI	GCNGC	9 cut(s)	269, 329, 651, 876, 939, 1234, 1266, 1368, 2391
FokI	GGATG	4 cut(s)	1572, 1769, 1792, 2574
FriOI	GRGCYC	1 cut(s)	2172
Fsp4HI	GCNGC	9 cut(s)	269, 329, 651, 876, 939, 1234, 1266, 1368, 2391
FspBI	CTAG	5 cut(s)	197, 855, 1244, 1431, 2592
GluI	GCNGC	9 cut(s)	269, 329, 651, 876, 939, 1234, 1266, 1368, 2391
GsuI	CTGGAG	1 cut(s)	852
HaeIII	GGCC	1 cut(s)	2205
HapII	CCGG	4 cut(s)	82, 1728, 1777, 2259
HgaI	GACGC	2 cut(s)	847, 1349
HincII	GTYRAC	2 cut(s)	508, 1936
HindII	GTYRAC	2 cut(s)	508, 1936
HindIII	AAGCTT	3 cut(s)	94, 1473, 2510
HpaII	CCGG	4 cut(s)	82, 1728, 1777, 2259
HphI	GGTGA	2 cut(s)	1103, 1195
Hpy166II	GTNNAC	8 cut(s)	130, 277, 508, 722, 1452, 1868, 1936, 2449
Hpy8I	GTNNAC	8 cut(s)	130, 277, 508, 722, 1452, 1868, 1936, 2449
Hpy99I	CGWCG	2 cut(s)	148, 1145
HpyAV	CCTTC	3 cut(s)	515, 1735, 2512
HpyCH4III	ACNGT	8 cut(s)	263, 539, 1104, 1217, 1502, 1825, 2073, 2633
HpyCH4IV	ACGT	1 cut(s)	2112
HpyF10VI	GCNNNNNNNGC	8 cut(s)	202, 656, 758, 1265, 1364, 1847, 2381, 2390
HpyF3I	CTNAG	9 cut(s)	14, 133, 332, 704, 1024, 1761, 1881, 1994, 2214
HpySE526I	ACGT	1 cut(s)	2112
Kpn2I	TCCGGA	2 cut(s)	1727, 2258
Kzo9I	GATC	8 cut(s)	35, 1434, 1509, 1569, 1957, 2157, 2209, 2407
LguI	GCTCTTC	2 cut(s)	1656, 2607
LmnI	GCTCC	3 cut(s)	185, 1428, 2521
Lsp1109I	GCAGC	8 cut(s)	255, 637, 862, 950, 1245, 1252, 1354, 2377
MaeI	CTAG	5 cut(s)	197, 855, 1244, 1431, 2592
MaeII	ACGT	1 cut(s)	2112
MaeIII	GTNAC	6 cut(s)	368, 906, 1496, 2008, 2113, 2702
MalI	GATC	8 cut(s)	37, 1436, 1511, 1571, 1959, 2159, 2211, 2409
MboI	GATC	8 cut(s)	35, 1434, 1509, 1569, 1957, 2157, 2209, 2407
MflI	RGATCY	4 cut(s)	1509, 1957, 2209, 2407
MhlI	GDGCHC	2 cut(s)	2146, 2172
MlyI	GAGTC	5 cut(s)	19, 707, 1110, 2349, 2411
MmeI	TCCRAC	4 cut(s)	266, 645, 1537, 2554
MroI	TCCGGA	2 cut(s)	1727, 2258
MroXI	GAANNNNTTC	4 cut(s)	404, 803, 1308, 1540
MseI	TTAA	5 cut(s)	393, 561, 1035, 2508, 2514
MslI	CAYNNNNRTG	1 cut(s)	915
MspA1I	CMGCKG	2 cut(s)	331, 1856
MspCI	CTTAAG	1 cut(s)	2513
MspI	CCGG	4 cut(s)	82, 1728, 1777, 2259
MspR9I	CCNGG	4 cut(s)	1777, 2014, 2207, 2526
Mva1269I	GAATGC	2 cut(s)	603, 1360
MvaI	CCWGG	3 cut(s)	2014, 2207, 2526
MwoI	GCNNNNNNNGC	8 cut(s)	202, 656, 758, 1265, 1364, 1847, 2381, 2390
NciI	CCSGG	1 cut(s)	1777
NdeI	CATATG	3 cut(s)	27, 219, 2321
NdeII	GATC	8 cut(s)	35, 1434, 1509, 1569, 1957, 2157, 2209, 2407
NheI	GCTAGC	1 cut(s)	854
NlaIV	GGNNCC	3 cut(s)	2211, 2409, 2523
NmuCI	GTSAC	1 cut(s)	2008
NspI	RCATGY	5 cut(s)	391, 914, 976, 1279, 1942
PaeR7I	CTCGAG	1 cut(s)	2171
PciI	ACATGT	4 cut(s)	387, 972, 1275, 1938
PciSI	GCTCTTC	2 cut(s)	1656, 2607
PcsI	WCGNNNNNNNCGW	2 cut(s)	152, 501
PctI	GAATGC	2 cut(s)	603, 1360
PdmI	GAANNNNTTC	4 cut(s)	404, 803, 1308, 1540
PfeI	GAWTC	7 cut(s)	121, 604, 1626, 1843, 1873, 1967, 2654
PflFI	GACNNNGTC	1 cut(s)	2315
PkrI	GCNGC	9 cut(s)	270, 330, 652, 877, 940, 1235, 1267, 1369, 2392
PleI	GAGTC	5 cut(s)	18, 706, 1110, 2348, 2411
PpsI	GAGTC	5 cut(s)	18, 706, 1110, 2348, 2411
PscI	ACATGT	4 cut(s)	387, 972, 1275, 1938
PshAI	GACNNNNGTC	1 cut(s)	1120
PsiI	TTATAA	1 cut(s)	1050
Psp6I	CCWGG	3 cut(s)	2012, 2205, 2524
PspGI	CCWGG	3 cut(s)	2012, 2205, 2524
PspN4I	GGNNCC	3 cut(s)	2211, 2409, 2523
PspPI	GGNCC	1 cut(s)	2692
PspXI	VCTCGAGB	1 cut(s)	2171
PstI	CTGCAG	2 cut(s)	273, 1695
PsuI	RGATCY	4 cut(s)	1509, 1957, 2209, 2407
PsyI	GACNNNGTC	1 cut(s)	2315
RsaI	GTAC	4 cut(s)	255, 977, 1943, 2177
RsaNI	GTAC	4 cut(s)	254, 976, 1942, 2176
RseI	CAYNNNNRTG	1 cut(s)	915
SapI	GCTCTTC	2 cut(s)	1656, 2607
SaqAI	TTAA	5 cut(s)	393, 561, 1035, 2508, 2514
SatI	GCNGC	9 cut(s)	269, 329, 651, 876, 939, 1234, 1266, 1368, 2391
Sau3AI	GATC	8 cut(s)	35, 1434, 1509, 1569, 1957, 2157, 2209, 2407
Sau96I	GGNCC	1 cut(s)	2692
ScaI	AGTACT	1 cut(s)	2177
SchI	GAGTC	5 cut(s)	19, 707, 1110, 2349, 2411
ScrFI	CCNGG	4 cut(s)	1777, 2014, 2207, 2526
SduI	GDGCHC	2 cut(s)	2146, 2172
SfcI	CTRYAG	3 cut(s)	269, 1691, 1921
Sfr274I	CTCGAG	1 cut(s)	2171
SinI	GGWCC	1 cut(s)	2692
SlaI	CTCGAG	1 cut(s)	2171
SmiMI	CAYNNNNRTG	1 cut(s)	915
SmlI	CTYRAG	3 cut(s)	862, 2171, 2513
SmoI	CTYRAG	3 cut(s)	862, 2171, 2513
SsiI	CCGC	7 cut(s)	5, 329, 900, 1607, 1854, 2031, 2222
SspMI	CTAG	5 cut(s)	197, 855, 1244, 1431, 2592
StyD4I	CCNGG	4 cut(s)	1775, 2012, 2205, 2524
StyI	CCWWGG	1 cut(s)	1179
TaaI	ACNGT	8 cut(s)	263, 539, 1104, 1217, 1502, 1825, 2073, 2633
TaiI	ACGT	1 cut(s)	2115
TatI	WGTACW	2 cut(s)	1941, 2175
TauI	GCSGC	1 cut(s)	331
TfiI	GAWTC	7 cut(s)	121, 604, 1626, 1843, 1873, 1967, 2654
Tru1I	TTAA	5 cut(s)	393, 561, 1035, 2508, 2514
Tru9I	TTAA	5 cut(s)	393, 561, 1035, 2508, 2514
TscAI	CASTG	4 cut(s)	45, 115, 1486, 2638
TseFI	GTSAC	1 cut(s)	2008
TseI	GCWGC	8 cut(s)	268, 650, 875, 938, 1233, 1265, 1367, 2390
Tsp45I	GTSAC	1 cut(s)	2008
TspGWI	ACGGA	2 cut(s)	1398, 1415
TspRI	CASTG	4 cut(s)	45, 115, 1486, 2638
Tth111I	GACNNNGTC	1 cut(s)	2315
Vha464I	CTTAAG	1 cut(s)	2513
VpaK11BI	GGWCC	1 cut(s)	2692
XapI	RAATTY	7 cut(s)	72, 283, 400, 733, 1008, 1714, 1808
XceI	RCATGY	5 cut(s)	391, 914, 976, 1279, 1942
XhoI	CTCGAG	1 cut(s)	2171
XmiI	GTMKAC	3 cut(s)	276, 721, 2448
XmnI	GAANNNNTTC	4 cut(s)	404, 803, 1308, 1540
XspI	CTAG	5 cut(s)	197, 855, 1244, 1431, 2592
ZrmI	AGTACT	1 cut(s)	2177

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.