Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0015462

Physical Location & Seq

Genomic Coordinates Reverse (-)

15517185 .. 15525559

Gene Structure 8375 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G143100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2850 bp

ATGGTAGCTCGACATAAACACATACCTCTTTTAGAAGCGCTTCTAAGATGGAGAGAAAGTGAATCACCAAAAGGTGAAAATGAGGCATCTACATTCCAAAGAAAGCCCAGCATGCGGTGGAGTGCATTTTTTGTTCAGCATGTATTCGCTTTTTCGAGTGCTGTCCGCAAGAAGGACTTGCAGAGAAACTTTGGTCTGGGCTTGAAATCTCTTTACCAACAAACACAACAACCCATTTACTCATTTTCTACTCTTGCACAGAACCAAACAACACCCACCAAGAATTTCAAAACATTCTCCCACATTTTCCAGCAATGCTCCCATGGCAGAGCTCCGAATCCAGGAAAACAAGCCCACGCTCGCATGATAGTTTCTGGGTTTGAGCCCACTGTCTTTGTTACAAATTGTTTGATCCAAATGTACGTAAAGTGTGGCGTTTTGGAATATGCAAGTAAGGTGTTTGATGGAATGCCGCAGCGGGACACGGTCTCGTGGAACACCATGATTTTTGGGTATGCTGAGAGTGGAAACATGGGGTTTGCGCAGTCTTGTTTTGATGTTATGCCCGAGAGAGATGTGGTCTCTTGGAATTCTTTGATTTCAGGGTACTTGCAGAATGGTGACTATCATAAGTCTATTGAAGTTTATGTGAATATGGGGAATGTGGGTGTGGAATTCGACTGTACTACGACTGCTATGGTTCTGAAAGCATGTTCTGTTATGGAAGAGATTGGTTTGGGGATTCAAATTCATTGTGTTTCAGTCAAGATGGGTTTTGATATTGATATGGTCACAGGAAGTGCTTTAGTAGATATGTATGGGAAGTGTAAGGAACTGGATTGCTCACTTCGGGTTTTCCGTGAATTGCCTGAAAAGAATTGGGTTTGTTGGAGCTCTGTGATTGCAGGTTCTGTTCAGAATGACCAGTTTGTCAAGGGTATAGATCTGTTTAAGGAGATGCAGAAAGCAGGAGTCGGGGTAAGCCAATCTATCTATGCTAGTGTCTTCAGGTCCTGTGCAGGATTATCTGCATATAGGTTAGGCACTCAGTTTCATGTACATGCTATAAAGACAGACTTCCTATATGATGTGATAGTTGGAACTGCCACATTGGACATGTATGCAAAATGTGGCAGTATGTCTGATGCTAGAAAGATATTCAACTTGATGCCAAATCGTAGTTTGCAGTCATATAATGCAACTATTGTTGGCTATGCTCGAAATGAGCATGGTTTTGAAGCTCTTGAGTTATTTCTGCTTTTGCTGAAGTCTGGTCTTGGTTTTGATGAGATAACATTATCTGGTGCACTCAGTGCTTGTGCAGTGATCAAGGGGCATTTGGAGGGGCTTCAACTGCAAGCATTAGTGGTTAAGAGTAGCTTGAGATCAAATATATGTGTAGCAAATGCCATTTTGGACATGTATGGTAAATGTGGAGATCTGTTTGGGGCCTCTCGCGTGTTTGATGAGATGGTAAGTAGAGATGCTGTGTCTTGGAATGCAATTATTGCAGCTCATGGACAGAATGAAAATGAAAAGGAGACACTTTCATTCTTCGTTTCCATGCTCCGCTCAAGGATGGAGCCGGATGAGTTCACCTTTGGCAGTGTTCTAAAAGTGTGTGCGGCTCAACATTCTTTAAATTATGGGATGGAAATCCATAGCAGAATTTTTAAATCTGGAATGGGCATGAACTTGTTTATTGGAGGTGCCCTTGTCGATATGTACTGCAAGTGCGGAATGATGGAAGAGGCAGAAAAGATACATGACAGAACAGAAGAACAAACCATGGTTTCATGGAATGCAATCATATCTGGTTTCTCACTACATAAGCAAAATGAGGATGCACAGAGATATTTCTCTCAGATGTTGGAAATGGGTGCAGAACCTGATAACTTCACATACGCAACGGTTCTTGATACCTGTGCTAATTTGGCTACTGTTGGACTTGGGAGGCAGATCCATGCTCAGATTATCAAGCATGAATTGCAATTAGATGTATACATAACCAGCACTCTTGTCGATATGTACTCAAAGTGTGGCAACATGCAAGATTCTTATCTAATGTTCAAAAAGGCACCTAAGCGAGATGCTGTTACATGGAATGCCATGATTTCTGGGTATGCAAACTTCGGCCTTGGAGAAGATGCCCTTAGAATTTTTGAGAACATGCAGCTTGAGAATGTTAAGCCAAACCACTCCACTTTTGTTTCAATACTCCGAGCCTGTGGACATATAGGACAAGTTGAAAAGGGTTTGCATTATTTCCGCACAATGCGTAATGACTATGGTTTACACCCTCAATTGGAGCATTACTCATGTATGGTGGATATCATAGGGAGGTCAGGTCAAGTTCATGAGGCCCTGAGGCTTATTCAAGATATGCCTTTCGAAGCTGACGACATTATATGGAGGACGCTGCTTAGCATTTGCAAGCTCCATGGAAATGTAGAAGTGGCTGAAAAAGCAGCCAGCTCTATTTTGCAACTGGATCCTCAAGATTCTTCTACCTATGTTCTACTATCAAATATATATGCTGAAGCTGGAATGTGGGGTGAGGTCTCGAAGATGAGGAAAACAATGAAGCATAGCAAATTGAAGAAAGAGCCTGGTTGCAGCTGGATTGAGGTGAAAGATGAGTTACATGCATTCCTGGTTGGGGACAAGGCTCATCCAAGATGTAACGAGGTGTATGAGAAGCTCGATTTGCTAGTTGCTGAGATGATGAGAGTTGGATATAGGCCGGAAATTGATGCCCTGCTTGATGAGGAGATGGAAGAACAGGAGCTTGAAGATAAGCTCAAAATTAGTTGGTTACCCTTTGGCAACTCTTCTTCTATGTCTTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016071 GO:0016553 GO:0016554 GO:0016556 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0097159 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

950

Amino Acids

106.69

Weight (kDa)

6.01

Isoelectric Point (pI)

39.83

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0015462)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02330
fragaria_vesca	FvH4_6g28230
malus_domestica	MD09G1077900.v1.1 MD17G1068000.v1.1
prunus_persica	Prupe.3G143100_v2.0.a1
pyrus_communis	pycom17g06860
rosa_chinensis	RchiOBHm_Chr2g0164271
rosa_laevigata	RLG00000021450
rosa_multiflora	Rmu_sc0007154.1_g000008
rosa_roxburghii	Rroxscaffold_2G00086650
rosa_rugosa	Rorug02G0507700
rosa_samantha	Rh2AG575700 Rh2BG586800 Rh2CG557300 Rh2DG596100
rosa_wichuraiana	Rw2G047670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	929
Acc16I	TGCGCA	1 cut(s)	543
Acc36I	ACCTGC	1 cut(s)	896
AccB1I	GGYRCC	2 cut(s)	1709, 2077
AccBSI	CCGCTC	1 cut(s)	1572
AccI	GTMKAC	1 cut(s)	2001
AccII	CGCG	1 cut(s)	1458
AciI	CCGC	8 cut(s)	115, 166, 473, 478, 1570, 1625, 1737, 2269
AclWI	GGATC	4 cut(s)	406, 1954, 2486, 2499
AcsI	RAATTY	6 cut(s)	283, 589, 674, 747, 1668, 2157
AcuI	CTGAAG	3 cut(s)	991, 1286, 2559
AdeI	CACNNNGTG	1 cut(s)	1313
AfaI	GTAC	6 cut(s)	422, 608, 685, 1059, 1727, 2030
AfeI	AGCGCT	1 cut(s)	39
AfiI	CCNNNNNNNGG	5 cut(s)	114, 172, 341, 2305, 2659
AflIII	ACRYGT	2 cut(s)	1116, 1419
AjnI	CCWGG	3 cut(s)	340, 2608, 2652
Alw21I	GWGCWC	3 cut(s)	334, 896, 1309
Alw26I	GTCTC	4 cut(s)	493, 586, 1535, 2566
Alw44I	GTGCAC	1 cut(s)	1305
AlwI	GGATC	4 cut(s)	406, 1954, 2486, 2499
AlwNI	CAGNNNCTG	3 cut(s)	911, 1014, 1889
Ama87I	CYCGRG	1 cut(s)	566
Aor51HI	AGCGCT	1 cut(s)	39
AoxI	GGCC	4 cut(s)	1449, 2134, 2361, 2741
ApaLI	GTGCAC	1 cut(s)	1305
ApeKI	GCWGC	6 cut(s)	475, 1511, 2173, 2419, 2468, 2616
ApoI	RAATTY	6 cut(s)	283, 589, 674, 747, 1668, 2157
Asp700I	GAANNNNTTC	1 cut(s)	39
AspLEI	GCGC	2 cut(s)	40, 544
AspS9I	GGNCC	3 cut(s)	1011, 1449, 2362
AsuHPI	GGTGA	6 cut(s)	57, 86, 632, 1588, 2567, 2641
AsuII	TTCGAA	1 cut(s)	2391
AvaI	CYCGRG	1 cut(s)	566
AvaII	GGWCC	1 cut(s)	1011
AxyI	CCTNAGG	1 cut(s)	2366
BaeGI	GKGCMC	2 cut(s)	1309, 1714
BamHI	GGATCC	1 cut(s)	2491
BanI	GGYRCC	2 cut(s)	1709, 2077
BanII	GRGCYC	3 cut(s)	334, 387, 896
BarI	GAAGNNNNNNTAC	2 cut(s)	2114, 2146
BauI	CACGAG	1 cut(s)	490
BbsI	GAAGAC	1 cut(s)	997
Bbv12I	GWGCWC	3 cut(s)	334, 896, 1309
BbvI	GCAGC	6 cut(s)	487, 1523, 2185, 2406, 2480, 2628
BccI	CCATC	8 cut(s)	42, 458, 763, 1465, 1573, 1645, 1738, 2767
BcgI	CGANNNNNNTGC	2 cut(s)	2002, 2036
BciT130I	CCWGG	3 cut(s)	342, 2610, 2654
BclI	TGATCA	1 cut(s)	1326
BcoDI	GTCTC	4 cut(s)	493, 586, 1535, 2566
BfaI	CTAG	3 cut(s)	999, 1149, 2711
BfoI	RGCGCY	1 cut(s)	41
BfuAI	ACCTGC	1 cut(s)	896
BglII	AGATCT	2 cut(s)	943, 1438
BisI	GCNGC	8 cut(s)	473, 476, 1512, 1626, 2174, 2420, 2469, 2617
BlpI	GCTNAGC	1 cut(s)	2423
BlsI	GCNGC	8 cut(s)	474, 477, 1513, 1627, 2175, 2421, 2470, 2618
Bme1390I	CCNGG	3 cut(s)	342, 2610, 2654
Bme18I	GGWCC	1 cut(s)	1011
BmeT110I	CYCGRG	1 cut(s)	566
BmgT120I	GGNCC	3 cut(s)	1011, 1449, 2362
BmiI	GGNNCC	5 cut(s)	1450, 1584, 1711, 2079, 2493
BmrFI	CCNGG	3 cut(s)	342, 2610, 2654
BmsI	GCATC	9 cut(s)	95, 948, 1135, 1158, 1474, 1834, 2080, 2137, 2743
BpiI	GAAGAC	1 cut(s)	997
BplI	GAGNNNNNCTC	2 cut(s)	2300, 2332
Bpu10I	CCTNAGC	1 cut(s)	2082
Bpu1102I	GCTNAGC	1 cut(s)	2423
Bpu14I	TTCGAA	1 cut(s)	2391
BpuEI	CTTGAG	5 cut(s)	1265, 1402, 1558, 2198, 2481
BsaAI	YACGTR	1 cut(s)	424
BsaBI	GATNNNNATC	2 cut(s)	1655, 2058
BsaI	GGTCTC	3 cut(s)	493, 586, 2566
BsaJI	CCNNGG	4 cut(s)	322, 1788, 2137, 2440
BsaXI	ACNNNNNCTCC	6 cut(s)	43, 73, 963, 993, 2332, 2362
Bsc4I	CCNNNNNNNGG	5 cut(s)	114, 172, 341, 2305, 2659
Bse1I	ACTGG	3 cut(s)	840, 925, 2493
Bse21I	CCTNAGG	1 cut(s)	2366
Bse3DI	GCAATG	1 cut(s)	320
Bse8I	GATNNNNATC	2 cut(s)	1655, 2058
BseBI	CCWGG	3 cut(s)	342, 2610, 2654
BseDI	CCNNGG	4 cut(s)	322, 1788, 2137, 2440
BseGI	GGATG	5 cut(s)	1584, 1594, 1656, 1849, 2671
BseJI	GATNNNNATC	2 cut(s)	1655, 2058
BseLI	CCNNNNNNNGG	5 cut(s)	114, 172, 341, 2305, 2659
BseMI	GCAATG	1 cut(s)	320
BseMII	CTCAG	7 cut(s)	510, 1061, 1324, 1877, 1982, 2357, 2709
BseNI	ACTGG	3 cut(s)	840, 925, 2493
BseRI	GAGGAG	1 cut(s)	2783
BseSI	GKGCMC	2 cut(s)	1309, 1714
BseXI	GCAGC	6 cut(s)	487, 1523, 2185, 2406, 2480, 2628
BseYI	CCCAGC	1 cut(s)	107
BsgI	GTGCAG	3 cut(s)	1038, 1341, 1902
Bsh1236I	CGCG	1 cut(s)	1458
BshFI	GGCC	4 cut(s)	1451, 2136, 2363, 2743
BshNI	GGYRCC	2 cut(s)	1709, 2077
BsiHKAI	GWGCWC	3 cut(s)	334, 896, 1309
BsiHKCI	CYCGRG	1 cut(s)	566
BsiSI	CCGG	2 cut(s)	1586, 2744
BslFI	GGGAC	2 cut(s)	494, 2675
BslI	CCNNNNNNNGG	5 cut(s)	114, 172, 341, 2305, 2659
BsmAI	GTCTC	4 cut(s)	493, 586, 1535, 2566
BsmFI	GGGAC	2 cut(s)	494, 2675
BsmI	GAATGC	5 cut(s)	474, 1504, 1807, 2110, 2648
BsnI	GGCC	4 cut(s)	1451, 2136, 2363, 2743
Bso31I	GGTCTC	3 cut(s)	493, 586, 2566
BsoBI	CYCGRG	1 cut(s)	566
Bsp119I	TTCGAA	1 cut(s)	2391
Bsp1286I	GDGCHC	5 cut(s)	334, 387, 896, 1309, 1714
Bsp1407I	TGTACA	1 cut(s)	1057
Bsp143I	GATC	7 cut(s)	411, 943, 1326, 1385, 1438, 1959, 2491
Bsp1720I	GCTNAGC	1 cut(s)	2423
Bsp19I	CCATGG	3 cut(s)	322, 1788, 2440
BspACI	CCGC	8 cut(s)	115, 166, 473, 478, 1570, 1625, 1737, 2269
BspANI	GGCC	4 cut(s)	1451, 2136, 2363, 2743
BspCNI	CTCAG	7 cut(s)	511, 1060, 1323, 1876, 1981, 2358, 2710
BspFNI	CGCG	1 cut(s)	1458
BspHI	TCATGA	1 cut(s)	2356
BspLI	GGNNCC	5 cut(s)	1450, 1584, 1711, 2079, 2493
BspMI	ACCTGC	1 cut(s)	896
BspPI	GGATC	4 cut(s)	406, 1954, 2486, 2499
BspT104I	TTCGAA	1 cut(s)	2391
BspT107I	GGYRCC	2 cut(s)	1709, 2077
BspTNI	GGTCTC	3 cut(s)	493, 586, 2566
BsrBI	CCGCTC	1 cut(s)	1572
BsrDI	GCAATG	1 cut(s)	320
BsrGI	TGTACA	1 cut(s)	1057
BsrI	ACTGG	3 cut(s)	840, 925, 2493
BssECI	CCNNGG	4 cut(s)	322, 1788, 2137, 2440
BssMI	GATC	7 cut(s)	411, 943, 1326, 1385, 1438, 1959, 2491
BssNAI	GTATAC	1 cut(s)	2002
BssSI	CACGAG	1 cut(s)	490
BssT1I	CCWWGG	4 cut(s)	322, 1788, 2137, 2440
Bst1107I	GTATAC	1 cut(s)	2002
Bst2BI	CACGAG	1 cut(s)	490
Bst2UI	CCWGG	3 cut(s)	342, 2610, 2654
Bst4CI	ACNGT	5 cut(s)	391, 487, 683, 1912, 1942
Bst6I	CTCTTC	3 cut(s)	720, 1743, 2836
BstAPI	GCANNNNNTGC	3 cut(s)	1313, 1508, 1987
BstAUI	TGTACA	1 cut(s)	1057
BstBAI	YACGTR	1 cut(s)	424
BstBI	TTCGAA	1 cut(s)	2391
BstC8I	GCNNGC	5 cut(s)	113, 361, 1359, 2435, 2473
BstDSI	CCRYGG	3 cut(s)	322, 1788, 2440
BstEII	GGTNACC	1 cut(s)	2814
BstF5I	GGATG	5 cut(s)	1584, 1594, 1656, 1849, 2671
BstFNI	CGCG	1 cut(s)	1458
BstH2I	RGCGCY	1 cut(s)	41
BstHHI	GCGC	2 cut(s)	40, 544
BstKTI	GATC	7 cut(s)	414, 946, 1329, 1388, 1441, 1962, 2494
BstMAI	GTCTC	4 cut(s)	493, 586, 1535, 2566
BstMBI	GATC	7 cut(s)	411, 943, 1326, 1385, 1438, 1959, 2491
BstMWI	GCNNNNNNNGC	9 cut(s)	112, 324, 1313, 1354, 1508, 1934, 1987, 2465, 2707
BstNI	CCWGG	3 cut(s)	342, 2610, 2654
BstNSI	RCATGY	9 cut(s)	115, 143, 714, 1064, 1120, 1423, 2050, 2173, 2648
BstPI	GGTNACC	1 cut(s)	2814
BstSCI	CCNGG	3 cut(s)	340, 2608, 2652
BstSLI	GKGCMC	2 cut(s)	1309, 1714
BstSNI	TACGTA	1 cut(s)	424
BstUI	CGCG	1 cut(s)	1458
BstV1I	GCAGC	6 cut(s)	487, 1523, 2185, 2406, 2480, 2628
BstV2I	GAAGAC	1 cut(s)	997
BstX2I	RGATCY	4 cut(s)	943, 1438, 1959, 2491
BstYI	RGATCY	4 cut(s)	943, 1438, 1959, 2491
BstZ17I	GTATAC	1 cut(s)	2002
Bsu36I	CCTNAGG	1 cut(s)	2366
BsuRI	GGCC	4 cut(s)	1451, 2136, 2363, 2743
BtgI	CCRYGG	3 cut(s)	322, 1788, 2440
BtsCI	GGATG	5 cut(s)	1584, 1594, 1656, 1849, 2671
BtsI	GCAGTG	2 cut(s)	1329, 1612
BtsIMutI	CAGTG	4 cut(s)	387, 1318, 1329, 1612
BveI	ACCTGC	1 cut(s)	896
Cac8I	GCNNGC	5 cut(s)	113, 361, 1359, 2435, 2473
CaiI	CAGNNNCTG	3 cut(s)	911, 1014, 1889
CciI	TCATGA	1 cut(s)	2356
CfoI	GCGC	2 cut(s)	40, 544
Cfr13I	GGNCC	3 cut(s)	1011, 1449, 2362
CseI	GACGC	1 cut(s)	2425
Csp6I	GTAC	6 cut(s)	421, 607, 684, 1058, 1726, 2029
CspCI	CAANNNNNGTGG	2 cut(s)	376, 411
CviQI	GTAC	6 cut(s)	421, 607, 684, 1058, 1726, 2029
DpnI	GATC	7 cut(s)	413, 945, 1328, 1387, 1440, 1961, 2493
DpnII	GATC	7 cut(s)	411, 943, 1326, 1385, 1438, 1959, 2491
DraI	TTTAAA	2 cut(s)	1641, 1675
DraIII	CACNNNGTG	1 cut(s)	1313
DrdI	GACNNNNNNGTC	1 cut(s)	929
DseDI	GACNNNNNNGTC	1 cut(s)	929
Eam1104I	CTCTTC	3 cut(s)	720, 1743, 2836
EarI	CTCTTC	3 cut(s)	720, 1743, 2836
Ecl136II	GAGCTC	2 cut(s)	332, 894
Eco105I	TACGTA	1 cut(s)	424
Eco130I	CCWWGG	4 cut(s)	322, 1788, 2137, 2440
Eco24I	GRGCYC	3 cut(s)	334, 387, 896
Eco31I	GGTCTC	3 cut(s)	493, 586, 2566
Eco32I	GATATC	1 cut(s)	2332
Eco47I	GGWCC	1 cut(s)	1011
Eco47III	AGCGCT	1 cut(s)	39
Eco53kI	GAGCTC	2 cut(s)	332, 894
Eco57I	CTGAAG	3 cut(s)	991, 1286, 2559
Eco81I	CCTNAGG	1 cut(s)	2366
Eco88I	CYCGRG	1 cut(s)	566
Eco91I	GGTNACC	1 cut(s)	2814
EcoICRI	GAGCTC	2 cut(s)	332, 894
EcoO109I	RGGNCCY	3 cut(s)	1011, 1449, 2362
EcoO65I	GGTNACC	1 cut(s)	2814
EcoRI	GAATTC	2 cut(s)	589, 674
EcoRII	CCWGG	3 cut(s)	340, 2608, 2652
EcoRV	GATATC	1 cut(s)	2332
EcoT14I	CCWWGG	4 cut(s)	322, 1788, 2137, 2440
EcoT22I	ATGCAT	1 cut(s)	2650
EcoT38I	GRGCYC	3 cut(s)	334, 387, 896
ErhI	CCWWGG	4 cut(s)	322, 1788, 2137, 2440
FalI	AAGNNNNNCTT	8 cut(s)	161, 193, 1061, 1093, 1364, 1396, 2136, 2168
FaqI	GGGAC	2 cut(s)	494, 2675
FauI	CCCGC	1 cut(s)	471
FbaI	TGATCA	1 cut(s)	1326
FblI	GTMKAC	1 cut(s)	2001
Fnu4HI	GCNGC	8 cut(s)	473, 476, 1512, 1626, 2174, 2420, 2469, 2617
FokI	GGATG	5 cut(s)	1591, 1601, 1663, 1856, 2658
FriOI	GRGCYC	3 cut(s)	334, 387, 896
Fsp4HI	GCNGC	8 cut(s)	473, 476, 1512, 1626, 2174, 2420, 2469, 2617
FspBI	CTAG	3 cut(s)	999, 1149, 2711
FspI	TGCGCA	1 cut(s)	543
GlaI	GCGC	2 cut(s)	39, 543
GluI	GCNGC	8 cut(s)	473, 476, 1512, 1626, 2174, 2420, 2469, 2617
GsaI	CCCAGC	1 cut(s)	111
HaeII	RGCGCY	1 cut(s)	41
HaeIII	GGCC	4 cut(s)	1451, 2136, 2363, 2743
HapII	CCGG	2 cut(s)	1586, 2744
HgaI	GACGC	1 cut(s)	2425
HhaI	GCGC	2 cut(s)	40, 544
Hin6I	GCGC	2 cut(s)	38, 542
HinP1I	GCGC	2 cut(s)	38, 542
HinfI	GANTC	6 cut(s)	62, 337, 742, 972, 2054, 2501
HpaII	CCGG	2 cut(s)	1586, 2744
HphI	GGTGA	6 cut(s)	57, 86, 632, 1588, 2567, 2641
Hpy166II	GTNNAC	5 cut(s)	1307, 1596, 2002, 2231, 2294
Hpy188I	TCNGA	7 cut(s)	336, 705, 918, 1144, 1866, 1971, 2222
Hpy188III	TCNNGA	8 cut(s)	766, 1244, 1680, 1916, 2357, 2378, 2498, 2563
Hpy8I	GTNNAC	5 cut(s)	1307, 1596, 2002, 2231, 2294
HpyAV	CCTTC	1 cut(s)	166
HpyCH4III	ACNGT	5 cut(s)	391, 487, 683, 1912, 1942
HpyCH4IV	ACGT	1 cut(s)	423
HpyF10VI	GCNNNNNNNGC	9 cut(s)	112, 324, 1313, 1354, 1508, 1934, 1987, 2465, 2707
HpySE526I	ACGT	1 cut(s)	423
HspAI	GCGC	2 cut(s)	38, 542
Ksp22I	TGATCA	1 cut(s)	1326
Kzo9I	GATC	7 cut(s)	411, 943, 1326, 1385, 1438, 1959, 2491
LmnI	GCTCC	8 cut(s)	323, 337, 891, 1572, 1582, 2308, 2442, 2785
Lsp1109I	GCAGC	6 cut(s)	487, 1523, 2185, 2406, 2480, 2628
LweI	GCATC	9 cut(s)	95, 948, 1135, 1158, 1474, 1834, 2080, 2137, 2743
MaeI	CTAG	3 cut(s)	999, 1149, 2711
MaeII	ACGT	1 cut(s)	423
MaeIII	GTNAC	7 cut(s)	397, 620, 790, 2095, 2640, 2681, 2814
MalI	GATC	7 cut(s)	413, 945, 1328, 1387, 1440, 1961, 2493
MbiI	CCGCTC	1 cut(s)	1572
MboI	GATC	7 cut(s)	411, 943, 1326, 1385, 1438, 1959, 2491
MfeI	CAATTG	1 cut(s)	2303
MflI	RGATCY	4 cut(s)	943, 1438, 1959, 2491
MhlI	GDGCHC	5 cut(s)	334, 387, 896, 1309, 1714
MlyI	GAGTC	1 cut(s)	981
MmeI	TCCRAC	5 cut(s)	869, 1078, 1851, 1924, 2713
Mph1103I	ATGCAT	1 cut(s)	2650
MroXI	GAANNNNTTC	1 cut(s)	39
MseI	TTAA	5 cut(s)	951, 1371, 1640, 1674, 2187
MslI	CAYNNNNRTG	2 cut(s)	1059, 2445
MspA1I	CMGCKG	2 cut(s)	478, 2619
MspI	CCGG	2 cut(s)	1586, 2744
MspR9I	CCNGG	3 cut(s)	342, 2610, 2654
MunI	CAATTG	1 cut(s)	2303
Mva1269I	GAATGC	5 cut(s)	474, 1504, 1807, 2110, 2648
MvaI	CCWGG	3 cut(s)	342, 2610, 2654
MvnI	CGCG	1 cut(s)	1458
MwoI	GCNNNNNNNGC	9 cut(s)	112, 324, 1313, 1354, 1508, 1934, 1987, 2465, 2707
NcoI	CCATGG	3 cut(s)	322, 1788, 2440
NdeII	GATC	7 cut(s)	411, 943, 1326, 1385, 1438, 1959, 2491
NlaIV	GGNNCC	5 cut(s)	1450, 1584, 1711, 2079, 2493
NmuCI	GTSAC	2 cut(s)	620, 790
NsbI	TGCGCA	1 cut(s)	543
NsiI	ATGCAT	1 cut(s)	2650
NspI	RCATGY	9 cut(s)	115, 143, 714, 1064, 1120, 1423, 2050, 2173, 2648
NspV	TTCGAA	1 cut(s)	2391
PaeI	GCATGC	1 cut(s)	115
PagI	TCATGA	1 cut(s)	2356
PciI	ACATGT	2 cut(s)	1116, 1419
PcsI	WCGNNNNNNNCGW	2 cut(s)	856, 2397
PctI	GAATGC	5 cut(s)	474, 1504, 1807, 2110, 2648
PdmI	GAANNNNTTC	1 cut(s)	39
PfeI	GAWTC	5 cut(s)	62, 337, 742, 2054, 2501
PflFI	GACNNNGTC	1 cut(s)	485
PfoI	TCCNGGA	1 cut(s)	340
PkrI	GCNGC	8 cut(s)	474, 477, 1513, 1627, 2175, 2421, 2470, 2618
PleI	GAGTC	1 cut(s)	980
PpsI	GAGTC	1 cut(s)	980
Ppu21I	YACGTR	1 cut(s)	424
PpuMI	RGGWCCY	1 cut(s)	1011
PscI	ACATGT	2 cut(s)	1116, 1419
Psp124BI	GAGCTC	2 cut(s)	334, 896
Psp5II	RGGWCCY	1 cut(s)	1011
Psp6I	CCWGG	3 cut(s)	340, 2608, 2652
PspEI	GGTNACC	1 cut(s)	2814
PspFI	CCCAGC	1 cut(s)	107
PspGI	CCWGG	3 cut(s)	340, 2608, 2652
PspN4I	GGNNCC	5 cut(s)	1450, 1584, 1711, 2079, 2493
PspPI	GGNCC	3 cut(s)	1011, 1449, 2362
PspPPI	RGGWCCY	1 cut(s)	1011
PstNI	CAGNNNCTG	3 cut(s)	911, 1014, 1889
PsuI	RGATCY	4 cut(s)	943, 1438, 1959, 2491
PsyI	GACNNNGTC	1 cut(s)	485
PvuII	CAGCTG	1 cut(s)	2619
RsaI	GTAC	6 cut(s)	422, 608, 685, 1059, 1727, 2030
RsaNI	GTAC	6 cut(s)	421, 607, 684, 1058, 1726, 2029
RseI	CAYNNNNRTG	2 cut(s)	1059, 2445
SacI	GAGCTC	2 cut(s)	334, 896
SaqAI	TTAA	5 cut(s)	951, 1371, 1640, 1674, 2187
SatI	GCNGC	8 cut(s)	473, 476, 1512, 1626, 2174, 2420, 2469, 2617
Sau3AI	GATC	7 cut(s)	411, 943, 1326, 1385, 1438, 1959, 2491
Sau96I	GGNCC	3 cut(s)	1011, 1449, 2362
SchI	GAGTC	1 cut(s)	981
ScrFI	CCNGG	3 cut(s)	342, 2610, 2654
SduI	GDGCHC	5 cut(s)	334, 387, 896, 1309, 1714
SfaNI	GCATC	9 cut(s)	95, 948, 1135, 1158, 1474, 1834, 2080, 2137, 2743
SfuI	TTCGAA	1 cut(s)	2391
SinI	GGWCC	1 cut(s)	1011
SmiMI	CAYNNNNRTG	2 cut(s)	1059, 2445
SmlI	CTYRAG	5 cut(s)	1244, 1381, 1573, 2177, 2496
SmoI	CTYRAG	5 cut(s)	1244, 1381, 1573, 2177, 2496
SnaBI	TACGTA	1 cut(s)	424
SphI	GCATGC	1 cut(s)	115
SsiI	CCGC	8 cut(s)	115, 166, 473, 478, 1570, 1625, 1737, 2269
SspMI	CTAG	3 cut(s)	999, 1149, 2711
SstI	GAGCTC	2 cut(s)	334, 896
StyD4I	CCNGG	3 cut(s)	340, 2608, 2652
StyI	CCWWGG	4 cut(s)	322, 1788, 2137, 2440
TaaI	ACNGT	5 cut(s)	391, 487, 683, 1912, 1942
TaiI	ACGT	1 cut(s)	426
TaqI	TCGA	9 cut(s)	10, 155, 678, 1219, 1719, 2022, 2391, 2564, 2703
TatI	WGTACW	4 cut(s)	683, 1057, 1725, 2028
TauI	GCSGC	2 cut(s)	475, 1628
TfiI	GAWTC	5 cut(s)	62, 337, 742, 2054, 2501
Tru1I	TTAA	5 cut(s)	951, 1371, 1640, 1674, 2187
Tru9I	TTAA	5 cut(s)	951, 1371, 1640, 1674, 2187
TscAI	CASTG	4 cut(s)	394, 1318, 1329, 1612
TseFI	GTSAC	2 cut(s)	620, 790
TseI	GCWGC	6 cut(s)	475, 1511, 2173, 2419, 2468, 2616
Tsp45I	GTSAC	2 cut(s)	620, 790
TspGWI	ACGGA	1 cut(s)	848
TspRI	CASTG	4 cut(s)	394, 1318, 1329, 1612
Tth111I	GACNNNGTC	1 cut(s)	485
VneI	GTGCAC	1 cut(s)	1305
VpaK11BI	GGWCC	1 cut(s)	1011
XapI	RAATTY	6 cut(s)	283, 589, 674, 747, 1668, 2157
XceI	RCATGY	9 cut(s)	115, 143, 714, 1064, 1120, 1423, 2050, 2173, 2648
XmiI	GTMKAC	1 cut(s)	2001
XmnI	GAANNNNTTC	1 cut(s)	39
XspI	CTAG	3 cut(s)	999, 1149, 2711
Zsp2I	ATGCAT	1 cut(s)	2650

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.