Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0015462

Physical Location & Seq

Genomic Coordinates Reverse (-)

8815941 .. 8821665

Gene Structure 5725 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00086650.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2433 bp

ATGCTCGTTTCCGGGTTCGAGCCCACCGTCTTCGTTACGAACTGTCTCATCCAAATGTATGTGAAATGCTGGGTCTTTGGTTATGCAGCCAAGGTGTTCGATGAAATGCCTCAACGGGACATGGTGTCGTGGAACACCATGAGTTTCGGGTATGCCGAGAGTGGCGACATGGGGTCTGCGCAGGCTTGTTTTGATGCCATGCCGGAGAGAGATGTGGTTTCTTGGAATTCGTTGATTTCGGGGTACTTGCAGAATGGGGAGTGTTTGAAGTCCATTGATGTTTATGTGAAGATGGGGAGTGCAGGGGTGCGATGTGACCGTACTACATCTGCTGTTGTTCTGAAAGTGTGCGCGGTGATGGAAGAGATTGAATTGGGGATTCAAATTCACTGTGTTGCGGTCAAAATGGCTTTCGACATTGATGTGTTCACGGGTAGTGCTTTAGCGGACATGTATGGCAAGTGTACAAGATTGGATTGTTCACTACATGTTTTTCGTGAATTGCCTGAAAAGAATTCAGTCTCGTGGAGCGCTGTAATTGCAGGTTCGGTTCAGAATGATAGGTTTGCTATGGGTATAGAACTATTTAATGAGATGCAGAAAGCAGGCATTGGGGTGAGCCAATCTACCTATGCTAGTGTTTTCAGGTCTTGTGCAGGATTATCTGCGCACTGCTTAGGCACTCAGTTACATGGACATGCTATAAAAACACAATTTCATTCTGATGTCGTAGTTGGTACTGCCACATTGGACATGTATGCAAAATGTGACAATGTAGCTGATGCGAGAAAGATATTTAACTCGATGCCAAACCGAAGTTTGCAGTCATATAATGCAATGATAGTTGGTTATGCTCGAAATGGGCAAGGTTTTGAAGCTCTGCAGCTATTTATGCTTCTGCGGAAGTTTGGCATTTGTTTTGATGAAATAACGTTGTCTGGCGCACTTAGTGCTTGTGCAATGATCAAAGGACACTTGGAGGGCCTTCAACTACAAGGATTAGTTGTTAAGAGTAGCTTCAGATCCAATGTATGTGTAACAAATGCCATTCTTGACATGTATGGTAAATGTGGAGATGTGTTGGGAGCTTCTTATGTGTTTGATGAGATGGTAAGAAGAGATGCTGTGTCTTGGAATGCAATCATTGCAGCTCATGGACAGAACGAAAATAAAGAGGAGACACTTTCTTGTTTTGTTTCCATGCTCCGCTCAAGGATGGAACCTGACGAGTTCACCTATGGTAGTGTTTTAAGAGCTTGTGCAGGTCAGCATTCTTTAAACCATGGTATGGAAATCCATAGCAGAATAATTAAATCGGGAATGGGCATGAACTTGTTTATTGGAGGTGCCCTTGTTGATATGTACTCCAAGTGTGGAATGATGGAAGAGGCTGAAAAAATACATCACAGAACAGAACACACGATGGTCTCATGGAATGCAATCATATCTGGTTTCTCACTGCTGAAGCAAAATGAGGATGCACAGACATTTTTTTCTCAGATGTTGGAGATGGGAGCAAAGCCTGATAATTTCACATATGCAACAGTGCTTGATACCTGTGCAAATTTGGCTACTGTTGGACTTGGGAAGCAGATCCATGCTCAAATTATCAAGCATGAATTGCAATCGGATGTATATGTGACCAGCACTCTTGTTGATATGTATGCCAAGTGTGGTAACATGCAAGACTCTCATCTAATGTTTAAGAAAGCACCTAAGCGGGATGCTGTTACATGGAATGCCATGATTTCTGGCTATGCGAACTATGGTCTTGGAGAAGATGCCCTTAGAATTTTTGAGAGTATGCAGTTTGAGAATGTGGAGCCAAACCACGTAACTTTTGTTTCTGTCCTCCGAGCCTGTGGACATGTTGGAAATGCTGAAAAAGGTTTGTACTACTTCCGCACAATGCTTTCTGACTATGGGTTGAAACCTCAGTTGGAGCATTACTCGTGTATGGTGGATATTATAGGGAGGTCAGGCCAAGTAGATCAAGCACTGAGGCTTATTCAAGATATGCCTTTTGAACCTGATGATGTAATATGGAGAACTCTGCTCAGCATTTGCAAGCTTCATGGGAATGTACAAGTGGCTGAAATAGCAGCCAACTCTATTTGGCAATTGGACCCGCAAGACTCTTCTACCTATGTCCTGTTGTCAAATATATATGCTGAAGCTGGAATGTGGGGTGAGGTCTTGGAGATGAGGAAAACAATGAGGTATAATAGGATGAAGAAGGAGCCGGGTTGCAGCTGGATTGAGGTAAAAGATGAAGTACACGCATTTTTTGTTGGGGACAAGGCTCATCCAAGAAGTAAGGAGGTATATGAGAGACTTGATTTGTTAGTTGTTGAGATGATGAGGATTGGGTATAGGCCAGAAATTGAATTTGTGCTTGATGAGGAGATGGAAGAGCAGGAGCACCTAGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016071 GO:0016553 GO:0016554 GO:0016556 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0097159 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

810

Amino Acids

90.53

Weight (kDa)

5.42

Isoelectric Point (pI)

39.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	70 - 118	3e-07	PPR repeat family
PPR_2	PF13041	171 - 219	1.9e-07	PPR repeat family
PPR	PF01535	276 - 305	4e-06	PPR repeat
PPR_2	PF13041	374 - 421	2.4e-09	PPR repeat family
PPR_2	PF13041	475 - 522	5.2e-10	PPR repeat family
PPR_3	PF13812	574 - 622	8.8e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	575 - 622	1e-12	PPR repeat family
PPR	PF01535	577 - 605	4.4e-07	PPR repeat
E_motif	PF20431	692 - 754	2e-21	E motif
Eplus_motif	PF20430	759 - 783	3.1e-07	E+ motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0015462)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02330
fragaria_vesca	FvH4_6g28230
malus_domestica	MD09G1077900.v1.1 MD17G1068000.v1.1
prunus_persica	Prupe.3G143100_v2.0.a1
pyrus_communis	pycom17g06860
rosa_chinensis	RchiOBHm_Chr2g0164271
rosa_laevigata	RLG00000021450
rosa_multiflora	Rmu_sc0007154.1_g000008
rosa_roxburghii	Rroxscaffold_2G00086650
rosa_rugosa	Rorug02G0507700
rosa_samantha	Rh2AG575700 Rh2BG586800 Rh2CG557300 Rh2DG596100
rosa_wichuraiana	Rw2G047670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	180, 669
Acc36I	ACCTGC	2 cut(s)	533, 1253
AccB1I	GGYRCC	1 cut(s)	1346
AccB7I	CCANNNNNTGG	1 cut(s)	1288
AccBSI	CCGCTC	1 cut(s)	1209
AccII	CGCG	1 cut(s)	353
AciI	CCGC	8 cut(s)	353, 398, 446, 901, 1207, 1720, 1903, 2129
AclI	AACGTT	1 cut(s)	932
AclWI	GGATC	2 cut(s)	1017, 1588
AcsI	RAATTY	6 cut(s)	226, 384, 514, 1564, 1791, 2387
AcuI	CTGAAG	3 cut(s)	1003, 1484, 2193
AdeI	CACNNNGTG	1 cut(s)	950
AfaI	GTAC	8 cut(s)	245, 322, 466, 739, 1364, 1895, 2085, 2277
AfeI	AGCGCT	1 cut(s)	532
AfiI	CCNNNNNNNGG	1 cut(s)	1288
AflIII	ACRYGT	5 cut(s)	450, 487, 753, 1056, 1867
AgsI	TTSAA	9 cut(s)	268, 371, 383, 875, 989, 1930, 2012, 2027, 2387
AhdI	GACNNNNNGTC	2 cut(s)	124, 172
AjuI	GAANNNNNNNTTGG	2 cut(s)	1922, 1954
Alw21I	GWGCWC	1 cut(s)	2424
Alw26I	GTCTC	5 cut(s)	50, 526, 1172, 1432, 2326
AlwI	GGATC	2 cut(s)	1017, 1588
Aor51HI	AGCGCT	1 cut(s)	532
AoxI	GGCC	3 cut(s)	982, 1981, 2375
ApeKI	GCWGC	5 cut(s)	86, 883, 1148, 2102, 2250
ApoI	RAATTY	6 cut(s)	226, 384, 514, 1564, 1791, 2387
AspLEI	GCGC	5 cut(s)	181, 353, 533, 670, 944
AspS9I	GGNCC	2 cut(s)	982, 2125
AsuC2I	CCSGG	2 cut(s)	13, 2244
AsuHPI	GGTGA	4 cut(s)	367, 628, 1225, 2201
AvaII	GGWCC	1 cut(s)	2125
BaeGI	GKGCMC	1 cut(s)	1351
BanI	GGYRCC	1 cut(s)	1346
BanII	GRGCYC	1 cut(s)	24
BauI	CACGAG	2 cut(s)	523, 1951
BbsI	GAAGAC	1 cut(s)	22
Bbv12I	GWGCWC	1 cut(s)	2424
BbvI	GCAGC	5 cut(s)	98, 895, 1160, 2114, 2262
BccI	CCATC	8 cut(s)	286, 352, 1102, 1210, 1375, 1417, 1504, 2401
BclI	TGATCA	1 cut(s)	963
BcnI	CCSGG	2 cut(s)	13, 2244
BcoDI	GTCTC	5 cut(s)	50, 526, 1172, 1432, 2326
BfaI	CTAG	2 cut(s)	636, 2426
BfmI	CTRYAG	1 cut(s)	881
BfoI	RGCGCY	1 cut(s)	534
BfuAI	ACCTGC	2 cut(s)	533, 1253
BisI	GCNGC	5 cut(s)	87, 884, 1149, 2103, 2251
BlpI	GCTNAGC	1 cut(s)	2057
BlsI	GCNGC	5 cut(s)	88, 885, 1150, 2104, 2252
Bme1390I	CCNGG	2 cut(s)	13, 2244
Bme18I	GGWCC	1 cut(s)	2125
BmeRI	GACNNNNNGTC	2 cut(s)	124, 172
BmgT120I	GGNCC	2 cut(s)	982, 2125
BmiI	GGNNCC	5 cut(s)	1221, 1348, 1824, 2127, 2241
BmrFI	CCNGG	2 cut(s)	13, 2244
BmsI	GCATC	8 cut(s)	184, 585, 772, 795, 1111, 1468, 1714, 1771
BpiI	GAAGAC	1 cut(s)	22
BplI	GAGNNNNNCTC	2 cut(s)	1934, 1966
Bpu10I	CCTNAGC	2 cut(s)	676, 1716
Bpu1102I	GCTNAGC	1 cut(s)	2057
BpuEI	CTTGAG	1 cut(s)	1195
BpuMI	CCSGG	2 cut(s)	13, 2244
BsaAI	YACGTR	1 cut(s)	1834
BsaI	GGTCTC	1 cut(s)	1432
BsaJI	CCNNGG	2 cut(s)	90, 1282
Bsc4I	CCNNNNNNNGG	1 cut(s)	1288
Bse3DI	GCAATG	3 cut(s)	843, 966, 1143
BseDI	CCNNGG	2 cut(s)	90, 1282
BseGI	GGATG	7 cut(s)	48, 1221, 1483, 1636, 1729, 2235, 2305
BseLI	CCNNNNNNNGG	1 cut(s)	1288
BseMI	GCAATG	3 cut(s)	843, 966, 1143
BseMII	CTCAG	5 cut(s)	698, 1511, 1949, 1991, 2071
BseRI	GAGGAG	2 cut(s)	1190, 2417
BseSI	GKGCMC	1 cut(s)	1351
BseXI	GCAGC	5 cut(s)	98, 895, 1160, 2114, 2262
BseYI	CCCAGC	1 cut(s)	69
BsgI	GTGCAG	3 cut(s)	321, 675, 1281
Bsh1236I	CGCG	1 cut(s)	353
BshFI	GGCC	3 cut(s)	984, 1983, 2377
BshNI	GGYRCC	1 cut(s)	1346
BsiHKAI	GWGCWC	1 cut(s)	2424
BsiSI	CCGG	3 cut(s)	12, 203, 2243
BslFI	GGGAC	2 cut(s)	131, 2309
BslI	CCNNNNNNNGG	1 cut(s)	1288
BsmAI	GTCTC	5 cut(s)	50, 526, 1172, 1432, 2326
BsmFI	GGGAC	2 cut(s)	131, 2309
BsmI	GAATGC	4 cut(s)	1141, 1270, 1441, 1744
BsnI	GGCC	3 cut(s)	984, 1983, 2377
Bso31I	GGTCTC	1 cut(s)	1432
Bsp1286I	GDGCHC	3 cut(s)	24, 1351, 2424
Bsp1407I	TGTACA	2 cut(s)	464, 2083
Bsp143I	GATC	4 cut(s)	963, 1022, 1593, 1990
Bsp1720I	GCTNAGC	1 cut(s)	2057
Bsp19I	CCATGG	1 cut(s)	1282
BspACI	CCGC	8 cut(s)	353, 398, 446, 901, 1207, 1720, 1903, 2129
BspANI	GGCC	3 cut(s)	984, 1983, 2377
BspCNI	CTCAG	5 cut(s)	697, 1510, 1948, 1992, 2070
BspFNI	CGCG	1 cut(s)	353
BspLI	GGNNCC	5 cut(s)	1221, 1348, 1824, 2127, 2241
BspMAI	CTGCAG	1 cut(s)	885
BspMI	ACCTGC	2 cut(s)	533, 1253
BspPI	GGATC	2 cut(s)	1017, 1588
BspQI	GCTCTTC	1 cut(s)	2406
BspT107I	GGYRCC	1 cut(s)	1346
BspTNI	GGTCTC	1 cut(s)	1432
BsrBI	CCGCTC	1 cut(s)	1209
BsrDI	GCAATG	3 cut(s)	843, 966, 1143
BsrGI	TGTACA	2 cut(s)	464, 2083
BssECI	CCNNGG	2 cut(s)	90, 1282
BssMI	GATC	4 cut(s)	963, 1022, 1593, 1990
BssSI	CACGAG	2 cut(s)	523, 1951
BssT1I	CCWWGG	2 cut(s)	90, 1282
Bst2BI	CACGAG	2 cut(s)	523, 1951
Bst4CI	ACNGT	6 cut(s)	28, 44, 320, 392, 1546, 1576
Bst6I	CTCTTC	5 cut(s)	357, 1111, 1380, 2143, 2406
BstAPI	GCANNNNNTGC	3 cut(s)	950, 1145, 1621
BstAUI	TGTACA	2 cut(s)	464, 2083
BstBAI	YACGTR	1 cut(s)	1834
BstC8I	GCNNGC	3 cut(s)	183, 607, 2069
BstDEI	CTNAG	9 cut(s)	676, 684, 947, 1497, 1716, 1787, 1935, 2000, 2057
BstDSI	CCRYGG	1 cut(s)	1282
BstF5I	GGATG	7 cut(s)	48, 1221, 1483, 1636, 1729, 2235, 2305
BstFNI	CGCG	1 cut(s)	353
BstH2I	RGCGCY	1 cut(s)	534
BstHHI	GCGC	5 cut(s)	181, 353, 533, 670, 944
BstKTI	GATC	4 cut(s)	966, 1025, 1596, 1993
BstMAI	GTCTC	5 cut(s)	50, 526, 1172, 1432, 2326
BstMBI	GATC	4 cut(s)	963, 1022, 1593, 1990
BstMWI	GCNNNNNNNGC	7 cut(s)	539, 892, 950, 1145, 1568, 1621, 2099
BstNSI	RCATGY	7 cut(s)	454, 491, 701, 757, 1060, 1684, 1871
BstSCI	CCNGG	2 cut(s)	11, 2242
BstSFI	CTRYAG	1 cut(s)	881
BstSLI	GKGCMC	1 cut(s)	1351
BstUI	CGCG	1 cut(s)	353
BstV1I	GCAGC	5 cut(s)	98, 895, 1160, 2114, 2262
BstV2I	GAAGAC	1 cut(s)	22
BstX2I	RGATCY	2 cut(s)	1022, 1593
BstYI	RGATCY	2 cut(s)	1022, 1593
BsuRI	GGCC	3 cut(s)	984, 1983, 2377
BtgI	CCRYGG	1 cut(s)	1282
BtgZI	GCGATG	1 cut(s)	325
BtsCI	GGATG	7 cut(s)	48, 1221, 1483, 1636, 1729, 2235, 2305
BtsI	GCAGTG	2 cut(s)	670, 1457
BtsIMutI	CAGTG	5 cut(s)	388, 670, 1457, 1551, 1997
BveI	ACCTGC	2 cut(s)	533, 1253
Cac8I	GCNNGC	3 cut(s)	183, 607, 2069
CfoI	GCGC	5 cut(s)	181, 353, 533, 670, 944
Cfr13I	GGNCC	2 cut(s)	982, 2125
Csp6I	GTAC	8 cut(s)	244, 321, 465, 738, 1363, 1894, 2084, 2276
CviQI	GTAC	8 cut(s)	244, 321, 465, 738, 1363, 1894, 2084, 2276
DdeI	CTNAG	9 cut(s)	676, 684, 947, 1497, 1716, 1787, 1935, 2000, 2057
DpnI	GATC	4 cut(s)	965, 1024, 1595, 1992
DpnII	GATC	4 cut(s)	963, 1022, 1593, 1990
DraI	TTTAAA	1 cut(s)	1278
DraIII	CACNNNGTG	1 cut(s)	950
DriI	GACNNNNNGTC	2 cut(s)	124, 172
Eam1104I	CTCTTC	5 cut(s)	357, 1111, 1380, 2143, 2406
Eam1105I	GACNNNNNGTC	2 cut(s)	124, 172
EarI	CTCTTC	5 cut(s)	357, 1111, 1380, 2143, 2406
Eco130I	CCWWGG	2 cut(s)	90, 1282
Eco24I	GRGCYC	1 cut(s)	24
Eco31I	GGTCTC	1 cut(s)	1432
Eco47I	GGWCC	1 cut(s)	2125
Eco47III	AGCGCT	1 cut(s)	532
Eco57I	CTGAAG	3 cut(s)	1003, 1484, 2193
EcoO109I	RGGNCCY	1 cut(s)	982
EcoRI	GAATTC	2 cut(s)	226, 514
EcoT14I	CCWWGG	2 cut(s)	90, 1282
EcoT38I	GRGCYC	1 cut(s)	24
ErhI	CCWWGG	2 cut(s)	90, 1282
FalI	AAGNNNNNCTT	4 cut(s)	1001, 1033, 1770, 1802
FaqI	GGGAC	2 cut(s)	131, 2309
FauI	CCCGC	2 cut(s)	1713, 2136
FauNDI	CATATG	1 cut(s)	1537
FbaI	TGATCA	1 cut(s)	963
Fnu4HI	GCNGC	5 cut(s)	87, 884, 1149, 2103, 2251
FokI	GGATG	7 cut(s)	35, 1228, 1490, 1643, 1736, 2242, 2292
FriOI	GRGCYC	1 cut(s)	24
Fsp4HI	GCNGC	5 cut(s)	87, 884, 1149, 2103, 2251
FspBI	CTAG	2 cut(s)	636, 2426
FspI	TGCGCA	2 cut(s)	180, 669
GlaI	GCGC	5 cut(s)	180, 352, 532, 669, 943
GluI	GCNGC	5 cut(s)	87, 884, 1149, 2103, 2251
GsaI	CCCAGC	1 cut(s)	73
HaeII	RGCGCY	1 cut(s)	534
HaeIII	GGCC	3 cut(s)	984, 1983, 2377
HapII	CCGG	3 cut(s)	12, 203, 2243
HhaI	GCGC	5 cut(s)	181, 353, 533, 670, 944
Hin6I	GCGC	5 cut(s)	179, 351, 531, 668, 942
HinP1I	GCGC	5 cut(s)	179, 351, 531, 668, 942
HindIII	AAGCTT	1 cut(s)	2069
HinfI	GANTC	3 cut(s)	379, 1688, 2135
HpaII	CCGG	3 cut(s)	12, 203, 2243
HphI	GGTGA	4 cut(s)	367, 628, 1225, 2201
Hpy166II	GTNNAC	6 cut(s)	429, 465, 482, 1233, 1865, 2278
Hpy188I	TCNGA	8 cut(s)	342, 555, 724, 1022, 1500, 1630, 1856, 1918
Hpy188III	TCNNGA	4 cut(s)	497, 1052, 1317, 2012
Hpy8I	GTNNAC	6 cut(s)	429, 465, 482, 1233, 1865, 2278
HpyAV	CCTTC	2 cut(s)	995, 2230
HpyCH4III	ACNGT	6 cut(s)	28, 44, 320, 392, 1546, 1576
HpyCH4IV	ACGT	2 cut(s)	932, 1833
HpyF10VI	GCNNNNNNNGC	7 cut(s)	539, 892, 950, 1145, 1568, 1621, 2099
HpyF3I	CTNAG	9 cut(s)	676, 684, 947, 1497, 1716, 1787, 1935, 2000, 2057
HpySE526I	ACGT	2 cut(s)	932, 1833
HspAI	GCGC	5 cut(s)	179, 351, 531, 668, 942
Ksp22I	TGATCA	1 cut(s)	963
Kzo9I	GATC	4 cut(s)	963, 1022, 1593, 1990
LguI	GCTCTTC	1 cut(s)	2406
LmnI	GCTCC	8 cut(s)	528, 1085, 1209, 1514, 1822, 1942, 2239, 2419
Lsp1109I	GCAGC	5 cut(s)	98, 895, 1160, 2114, 2262
LweI	GCATC	8 cut(s)	184, 585, 772, 795, 1111, 1468, 1714, 1771
MaeI	CTAG	2 cut(s)	636, 2426
MaeII	ACGT	2 cut(s)	932, 1833
MaeIII	GTNAC	9 cut(s)	34, 314, 687, 767, 1036, 1639, 1676, 1729, 1834
MalI	GATC	4 cut(s)	965, 1024, 1595, 1992
MbiI	CCGCTC	1 cut(s)	1209
MboI	GATC	4 cut(s)	963, 1022, 1593, 1990
MboII	GAAGA	9 cut(s)	22, 301, 374, 1128, 1397, 1790, 2130, 2245, 2423
MfeI	CAATTG	1 cut(s)	2120
MflI	RGATCY	2 cut(s)	1022, 1593
MhlI	GDGCHC	3 cut(s)	24, 1351, 2424
MlyI	GAGTC	2 cut(s)	1682, 2129
MmeI	TCCRAC	4 cut(s)	1485, 1558, 1852, 1920
MseI	TTAA	7 cut(s)	588, 798, 1008, 1250, 1277, 1311, 1704
MslI	CAYNNNNRTG	6 cut(s)	53, 422, 614, 696, 723, 2079
MspA1I	CMGCKG	1 cut(s)	2253
MspI	CCGG	3 cut(s)	12, 203, 2243
MspR9I	CCNGG	2 cut(s)	13, 2244
MunI	CAATTG	1 cut(s)	2120
Mva1269I	GAATGC	4 cut(s)	1141, 1270, 1441, 1744
MvnI	CGCG	1 cut(s)	353
MwoI	GCNNNNNNNGC	7 cut(s)	539, 892, 950, 1145, 1568, 1621, 2099
NciI	CCSGG	2 cut(s)	13, 2244
NcoI	CCATGG	1 cut(s)	1282
NdeI	CATATG	1 cut(s)	1537
NdeII	GATC	4 cut(s)	963, 1022, 1593, 1990
NlaIV	GGNNCC	5 cut(s)	1221, 1348, 1824, 2127, 2241
NmeAIII	GCCGAG	1 cut(s)	181
NmuCI	GTSAC	3 cut(s)	314, 767, 1639
NsbI	TGCGCA	2 cut(s)	180, 669
NspI	RCATGY	7 cut(s)	454, 491, 701, 757, 1060, 1684, 1871
PciI	ACATGT	5 cut(s)	450, 487, 753, 1056, 1867
PciSI	GCTCTTC	1 cut(s)	2406
PcsI	WCGNNNNNNNCGW	2 cut(s)	24, 153
PctI	GAATGC	4 cut(s)	1141, 1270, 1441, 1744
PfeI	GAWTC	1 cut(s)	379
PflMI	CCANNNNNTGG	1 cut(s)	1288
PkrI	GCNGC	5 cut(s)	88, 885, 1150, 2104, 2252
PleI	GAGTC	2 cut(s)	1682, 2129
PpsI	GAGTC	2 cut(s)	1682, 2129
Ppu21I	YACGTR	1 cut(s)	1834
PscI	ACATGT	5 cut(s)	450, 487, 753, 1056, 1867
Psp1406I	AACGTT	1 cut(s)	932
PspFI	CCCAGC	1 cut(s)	69
PspN4I	GGNNCC	5 cut(s)	1221, 1348, 1824, 2127, 2241
PspPI	GGNCC	2 cut(s)	982, 2125
PstI	CTGCAG	1 cut(s)	885
PsuI	RGATCY	2 cut(s)	1022, 1593
PvuII	CAGCTG	1 cut(s)	2253
RsaI	GTAC	8 cut(s)	245, 322, 466, 739, 1364, 1895, 2085, 2277
RsaNI	GTAC	8 cut(s)	244, 321, 465, 738, 1363, 1894, 2084, 2276
RseI	CAYNNNNRTG	6 cut(s)	53, 422, 614, 696, 723, 2079
SapI	GCTCTTC	1 cut(s)	2406
SaqAI	TTAA	7 cut(s)	588, 798, 1008, 1250, 1277, 1311, 1704
SatI	GCNGC	5 cut(s)	87, 884, 1149, 2103, 2251
Sau3AI	GATC	4 cut(s)	963, 1022, 1593, 1990
Sau96I	GGNCC	2 cut(s)	982, 2125
SchI	GAGTC	2 cut(s)	1682, 2129
ScrFI	CCNGG	2 cut(s)	13, 2244
SduI	GDGCHC	3 cut(s)	24, 1351, 2424
SfaNI	GCATC	8 cut(s)	184, 585, 772, 795, 1111, 1468, 1714, 1771
SfcI	CTRYAG	1 cut(s)	881
SinI	GGWCC	1 cut(s)	2125
SmiMI	CAYNNNNRTG	6 cut(s)	53, 422, 614, 696, 723, 2079
SmlI	CTYRAG	1 cut(s)	1210
SmoI	CTYRAG	1 cut(s)	1210
SsiI	CCGC	8 cut(s)	353, 398, 446, 901, 1207, 1720, 1903, 2129
SspMI	CTAG	2 cut(s)	636, 2426
StyD4I	CCNGG	2 cut(s)	11, 2242
StyI	CCWWGG	2 cut(s)	90, 1282
TaaI	ACNGT	6 cut(s)	28, 44, 320, 392, 1546, 1576
TaiI	ACGT	2 cut(s)	935, 1836
TaqI	TCGA	5 cut(s)	18, 99, 414, 803, 856
TatI	WGTACW	5 cut(s)	464, 1362, 1893, 2083, 2275
TfiI	GAWTC	1 cut(s)	379
Tru1I	TTAA	7 cut(s)	588, 798, 1008, 1250, 1277, 1311, 1704
Tru9I	TTAA	7 cut(s)	588, 798, 1008, 1250, 1277, 1311, 1704
TscAI	CASTG	5 cut(s)	395, 677, 1464, 1551, 2004
TseFI	GTSAC	3 cut(s)	314, 767, 1639
TseI	GCWGC	5 cut(s)	86, 883, 1148, 2102, 2250
Tsp45I	GTSAC	3 cut(s)	314, 767, 1639
TspDTI	ATGAA	8 cut(s)	117, 707, 939, 1343, 1632, 2063, 2246, 2286
TspRI	CASTG	5 cut(s)	395, 677, 1464, 1551, 2004
Van91I	CCANNNNNTGG	1 cut(s)	1288
VpaK11BI	GGWCC	1 cut(s)	2125
XapI	RAATTY	6 cut(s)	226, 384, 514, 1564, 1791, 2387
XceI	RCATGY	7 cut(s)	454, 491, 701, 757, 1060, 1684, 1871
XspI	CTAG	2 cut(s)	636, 2426

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.