Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009390

Physical Location & Seq

Genomic Coordinates Reverse (-)

627512 .. 629925

Gene Structure 2414 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G02870.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 816 bp

ATGGCGGACAATGATTCTCTAGATCAGTTTTTGGCTGCCGCCATTGATGCCGCTAAAAAAGCTGGACAGATCATTCGTAAAGGGTTTTACGAGACTAAACATGTTGAACACAAAGGCCAGGTGGATTTGGTGACAGAGACTGATAAAGGATGTGAAGAACTTGTGTTTAATCATCTCAAGCAGCTCTTTCCCAATCACAAGTTCATAGGAGAAGAAACTACAGCTGCATTTGGTGTGACAGAACTAACTGACGAACCAACTTGGATTGTTGATCCTCTTGATGGAACAACCAATTTCGTTCACGGGTTCCCTTTCGTGTGTGTTTCCATTGGACTTACGATTGGAAAAGTCCCTGTTGTTGGAGTTGTTTATAATCCTATTATGGAAGAGCTATTCACCGGTGTCCAAGGGAAAGGAGCATTCTTGAATGGAAAGCGAATCAAAGTGTCAGCTCAAAGCGAACTTTTAACCGCTTTGCTCGTGACAGAGGCGGGTACTAAACGAGATAAAGCTACATTAGACGATACAACCAACAGAATCAACAGTTTGCTAACCAAGGTCAGGTCCCTTAGGATGAGTGGTTCGTGTGCACTGGACCTCTGTGGCGTTGCGTGTGGAAGGGTTGATATCTTCTACGAGCTCGGTTTCGGTGGTCCATGGGACATTGCAGCAGGAATTGTTATCGTGAAAGAAGCTGGTGGACTCATCTTTGATCCATCCGGTAAAGATTTGGACATAACATCGCAGAGGATCGCGGCTTCAAACGCTTCTCTCAAGGAGTTATTCGCTGAGGCGTTGCGGCTTACAGGGGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000287 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005975 GO:0005996 GO:0006020 GO:0006021 GO:0006066 GO:0006082 GO:0006732 GO:0006766 GO:0006767 GO:0006793 GO:0006796 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008934 GO:0009056 GO:0009058 GO:0009108 GO:0009110 GO:0009266 GO:0009409 GO:0009628 GO:0009987 GO:0010347 GO:0016020 GO:0016051 GO:0016053 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019203 GO:0019637 GO:0019751 GO:0019752 GO:0019852 GO:0019853 GO:0023052 GO:0034637 GO:0042364 GO:0042578 GO:0043167 GO:0043169 GO:0043436 GO:0043647 GO:0044237 GO:0044238 GO:0044249 GO:0044262 GO:0044281 GO:0044282 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046164 GO:0046165 GO:0046173 GO:0046174 GO:0046364 GO:0046394 GO:0046434 GO:0046838 GO:0046855 GO:0046872 GO:0050308 GO:0050789 GO:0050794 GO:0050896 GO:0051186 GO:0051188 GO:0051716 GO:0052745 GO:0052834 GO:0065007 GO:0070456 GO:0071545 GO:0071704 GO:0071944 GO:0080167 GO:1901575 GO:1901576 GO:1901615 GO:1901616 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00053 ko00562 ko01100 ko01110 ko04070 map00053 map00562 map01100 map01110 map04070

Pfam Domains

Protein Families

Inositol_P

Protein Analysis

271

Amino Acids

29.12

Weight (kDa)

5.21

Isoelectric Point (pI)

23.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inositol_P	PF00459	7 - 265	1.7e-81	Inositol monophosphatase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009390)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02870 AT3G02870 AT3G02870
fragaria_vesca	FvH4_3g00781
malus_domestica	MD05G1359400.v1.1 MD10G1334900.v1.1
prunus_persica	Prupe.4G008700_v2.0.a1
pyrus_communis	pycom05g32460 pycom10g28470
rosa_chinensis	RchiOBHm_Chr5g0001031 RchiOBHm_Chr6g0245961
rosa_laevigata	RLG00000030915
rosa_multiflora	Rmu_sc0000255.1_g000031 Rmu_sc0002281.1_g000006 Rmu_sc0004189.1_g000002
rosa_rugosa	Rorug04G0389100
rosa_samantha	Rh5AG008300 Rh5BG010400 Rh5CG009000 Rh5DG009200
rosa_wichuraiana	Rw5G000850 Rw6G002740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	372
AccII	CGCG	1 cut(s)	755
AciI	CCGC	7 cut(s)	5, 39, 51, 471, 491, 755, 799
AclWI	GGATC	3 cut(s)	266, 707, 758
AfaI	GTAC	1 cut(s)	496
AfiI	CCNNNNNNNGG	3 cut(s)	281, 359, 561
AflIII	ACRYGT	1 cut(s)	100
AgeI	ACCGGT	1 cut(s)	398
AgsI	TTSAA	3 cut(s)	107, 427, 762
AjnI	CCWGG	1 cut(s)	117
AjuI	GAANNNNNNNTTGG	2 cut(s)	185, 217
AloI	GAACNNNNNNTCC	2 cut(s)	565, 597
AluBI	AGCT	8 cut(s)	62, 184, 224, 391, 452, 512, 640, 695
AluI	AGCT	8 cut(s)	62, 184, 224, 391, 452, 512, 640, 695
Alw21I	GWGCWC	2 cut(s)	592, 642
Alw26I	GTCTC	2 cut(s)	86, 131
Alw44I	GTGCAC	1 cut(s)	588
AlwI	GGATC	3 cut(s)	266, 707, 758
AlwNI	CAGNNNCTG	1 cut(s)	140
AoxI	GGCC	1 cut(s)	115
ApaLI	GTGCAC	1 cut(s)	588
ApeKI	GCWGC	4 cut(s)	35, 181, 224, 668
ArsI	GACNNNNNNTTYG	2 cut(s)	57, 89
AsiGI	ACCGGT	1 cut(s)	398
AspS9I	GGNCC	3 cut(s)	564, 595, 653
AsuHPI	GGTGA	2 cut(s)	142, 388
AvaII	GGWCC	3 cut(s)	564, 595, 653
AxyI	CCTNAGG	1 cut(s)	569
BaeGI	GKGCMC	1 cut(s)	592
BanII	GRGCYC	1 cut(s)	642
BauI	CACGAG	1 cut(s)	479
Bbv12I	GWGCWC	2 cut(s)	592, 642
BbvCI	CCTCAGC	1 cut(s)	789
BbvI	GCAGC	4 cut(s)	22, 193, 211, 680
BccI	CCATC	2 cut(s)	275, 724
BciT130I	CCWGG	1 cut(s)	119
BcoDI	GTCTC	2 cut(s)	86, 131
BfaI	CTAG	1 cut(s)	20
BfmI	CTRYAG	1 cut(s)	219
BisI	GCNGC	8 cut(s)	36, 39, 51, 182, 225, 669, 756, 800
BlsI	GCNGC	8 cut(s)	37, 40, 52, 183, 226, 670, 757, 801
Bme1390I	CCNGG	1 cut(s)	119
Bme18I	GGWCC	3 cut(s)	564, 595, 653
BmgT120I	GGNCC	3 cut(s)	564, 595, 653
BmiI	GGNNCC	2 cut(s)	308, 566
BmrFI	CCNGG	1 cut(s)	119
BmsI	GCATC	1 cut(s)	37
Bpu10I	CCTNAGC	1 cut(s)	789
BpuEI	CTTGAG	2 cut(s)	161, 758
BsaJI	CCNNGG	3 cut(s)	406, 555, 656
BsaWI	WCCGGW	2 cut(s)	398, 719
Bsc4I	CCNNNNNNNGG	3 cut(s)	281, 359, 561
Bse118I	RCCGGY	1 cut(s)	398
Bse1I	ACTGG	1 cut(s)	597
Bse21I	CCTNAGG	1 cut(s)	569
Bse3DI	GCAATG	1 cut(s)	663
BseBI	CCWGG	1 cut(s)	119
BseDI	CCNNGG	3 cut(s)	406, 555, 656
BseGI	GGATG	3 cut(s)	155, 579, 716
BseLI	CCNNNNNNNGG	3 cut(s)	281, 359, 561
BseMI	GCAATG	1 cut(s)	663
BseMII	CTCAG	1 cut(s)	780
BseNI	ACTGG	1 cut(s)	597
BseSI	GKGCMC	1 cut(s)	592
BseXI	GCAGC	4 cut(s)	22, 193, 211, 680
Bsh1236I	CGCG	1 cut(s)	755
BshFI	GGCC	1 cut(s)	117
BshTI	ACCGGT	1 cut(s)	398
BsiHKAI	GWGCWC	2 cut(s)	592, 642
BsiSI	CCGG	2 cut(s)	399, 720
BslFI	GGGAC	3 cut(s)	335, 550, 674
BslI	CCNNNNNNNGG	3 cut(s)	281, 359, 561
BsmAI	GTCTC	2 cut(s)	86, 131
BsmFI	GGGAC	3 cut(s)	335, 550, 674
BsmI	GAATGC	1 cut(s)	419
BsnI	GGCC	1 cut(s)	117
Bsp1286I	GDGCHC	2 cut(s)	592, 642
Bsp143I	GATC	5 cut(s)	22, 69, 271, 712, 750
Bsp19I	CCATGG	1 cut(s)	656
BspACI	CCGC	7 cut(s)	5, 39, 51, 471, 491, 755, 799
BspANI	GGCC	1 cut(s)	117
BspCNI	CTCAG	1 cut(s)	781
BspFNI	CGCG	1 cut(s)	755
BspLI	GGNNCC	2 cut(s)	308, 566
BspPI	GGATC	3 cut(s)	266, 707, 758
BspQI	GCTCTTC	1 cut(s)	381
BsrDI	GCAATG	1 cut(s)	663
BsrFI	RCCGGY	1 cut(s)	398
BsrI	ACTGG	1 cut(s)	597
BssAI	RCCGGY	1 cut(s)	398
BssECI	CCNNGG	3 cut(s)	406, 555, 656
BssMI	GATC	5 cut(s)	22, 69, 271, 712, 750
BssSI	CACGAG	1 cut(s)	479
BssT1I	CCWWGG	3 cut(s)	406, 555, 656
Bst2BI	CACGAG	1 cut(s)	479
Bst2UI	CCWGG	1 cut(s)	119
Bst4CI	ACNGT	1 cut(s)	545
Bst6I	CTCTTC	1 cut(s)	381
BstDEI	CTNAG	2 cut(s)	569, 789
BstDSI	CCRYGG	1 cut(s)	656
BstF5I	GGATG	3 cut(s)	155, 579, 716
BstFNI	CGCG	1 cut(s)	755
BstKTI	GATC	5 cut(s)	25, 72, 274, 715, 753
BstMAI	GTCTC	2 cut(s)	86, 131
BstMBI	GATC	5 cut(s)	22, 69, 271, 712, 750
BstMWI	GCNNNNNNNGC	3 cut(s)	47, 59, 764
BstNI	CCWGG	1 cut(s)	119
BstNSI	RCATGY	1 cut(s)	104
BstSCI	CCNGG	1 cut(s)	117
BstSFI	CTRYAG	1 cut(s)	219
BstSLI	GKGCMC	1 cut(s)	592
BstUI	CGCG	1 cut(s)	755
BstV1I	GCAGC	4 cut(s)	22, 193, 211, 680
Bsu36I	CCTNAGG	1 cut(s)	569
BsuRI	GGCC	1 cut(s)	117
BtgI	CCRYGG	1 cut(s)	656
BtgZI	GCGATG	1 cut(s)	726
BtsCI	GGATG	3 cut(s)	155, 579, 716
BtsIMutI	CAGTG	1 cut(s)	590
CaiI	CAGNNNCTG	1 cut(s)	140
Cfr10I	RCCGGY	1 cut(s)	398
Cfr13I	GGNCC	3 cut(s)	564, 595, 653
Csp6I	GTAC	1 cut(s)	495
CspAI	ACCGGT	1 cut(s)	398
CviAII	CATG	3 cut(s)	101, 657, 813
CviQI	GTAC	1 cut(s)	495
DdeI	CTNAG	2 cut(s)	569, 789
DpnI	GATC	5 cut(s)	24, 71, 273, 714, 752
DpnII	GATC	5 cut(s)	22, 69, 271, 712, 750
Eam1104I	CTCTTC	1 cut(s)	381
EarI	CTCTTC	1 cut(s)	381
EciI	GGCGGA	1 cut(s)	20
Ecl136II	GAGCTC	1 cut(s)	640
Eco130I	CCWWGG	3 cut(s)	406, 555, 656
Eco24I	GRGCYC	1 cut(s)	642
Eco32I	GATATC	1 cut(s)	628
Eco47I	GGWCC	3 cut(s)	564, 595, 653
Eco53kI	GAGCTC	1 cut(s)	640
Eco81I	CCTNAGG	1 cut(s)	569
EcoICRI	GAGCTC	1 cut(s)	640
EcoO109I	RGGNCCY	1 cut(s)	564
EcoRII	CCWGG	1 cut(s)	117
EcoRV	GATATC	1 cut(s)	628
EcoT14I	CCWWGG	3 cut(s)	406, 555, 656
EcoT38I	GRGCYC	1 cut(s)	642
ErhI	CCWWGG	3 cut(s)	406, 555, 656
FaeI	CATG	3 cut(s)	104, 660, 816
FaiI	YATR	7 cut(s)	102, 206, 372, 383, 658, 737, 814
FalI	AAGNNNNNCTT	2 cut(s)	170, 202
FaqI	GGGAC	3 cut(s)	335, 550, 674
FatI	CATG	3 cut(s)	100, 656, 812
FauI	CCCGC	1 cut(s)	484
Fnu4HI	GCNGC	8 cut(s)	36, 39, 51, 182, 225, 669, 756, 800
FokI	GGATG	3 cut(s)	162, 586, 703
FriOI	GRGCYC	1 cut(s)	642
Fsp4HI	GCNGC	8 cut(s)	36, 39, 51, 182, 225, 669, 756, 800
FspBI	CTAG	1 cut(s)	20
GluI	GCNGC	8 cut(s)	36, 39, 51, 182, 225, 669, 756, 800
HaeIII	GGCC	1 cut(s)	117
HapII	CCGG	2 cut(s)	399, 720
Hin1II	CATG	3 cut(s)	104, 660, 816
HinfI	GANTC	4 cut(s)	14, 438, 537, 702
HpaII	CCGG	2 cut(s)	399, 720
HphI	GGTGA	2 cut(s)	142, 388
Hpy166II	GTNNAC	3 cut(s)	301, 590, 701
Hpy188III	TCNNGA	5 cut(s)	20, 278, 424, 481, 685
Hpy8I	GTNNAC	3 cut(s)	301, 590, 701
HpyAV	CCTTC	1 cut(s)	612
HpyCH4III	ACNGT	1 cut(s)	545
HpyCH4V	TGCA	3 cut(s)	227, 590, 668
HpyF10VI	GCNNNNNNNGC	3 cut(s)	47, 59, 764
HpyF3I	CTNAG	2 cut(s)	569, 789
Hsp92II	CATG	3 cut(s)	104, 660, 816
Kzo9I	GATC	5 cut(s)	22, 69, 271, 712, 750
LguI	GCTCTTC	1 cut(s)	381
LmnI	GCTCC	1 cut(s)	416
Lsp1109I	GCAGC	4 cut(s)	22, 193, 211, 680
LweI	GCATC	1 cut(s)	37
MaeI	CTAG	1 cut(s)	20
MaeIII	GTNAC	3 cut(s)	130, 235, 481
MalI	GATC	5 cut(s)	24, 71, 273, 714, 752
MboI	GATC	5 cut(s)	22, 69, 271, 712, 750
MboII	GAAGA	4 cut(s)	167, 224, 398, 622
MhlI	GDGCHC	2 cut(s)	592, 642
MluCI	AATT	2 cut(s)	292, 675
MlyI	GAGTC	1 cut(s)	696
MmeI	TCCRAC	1 cut(s)	340
MnlI	CCTC	5 cut(s)	285, 481, 608, 741, 784
MseI	TTAA	2 cut(s)	168, 467
MspA1I	CMGCKG	1 cut(s)	224
MspI	CCGG	2 cut(s)	399, 720
MspR9I	CCNGG	1 cut(s)	119
Mva1269I	GAATGC	1 cut(s)	419
MvaI	CCWGG	1 cut(s)	119
MvnI	CGCG	1 cut(s)	755
MwoI	GCNNNNNNNGC	3 cut(s)	47, 59, 764
NcoI	CCATGG	1 cut(s)	656
NdeII	GATC	5 cut(s)	22, 69, 271, 712, 750
NlaIII	CATG	3 cut(s)	104, 660, 816
NlaIV	GGNNCC	2 cut(s)	308, 566
NmuCI	GTSAC	3 cut(s)	130, 235, 481
NspI	RCATGY	1 cut(s)	104
PciI	ACATGT	1 cut(s)	100
PciSI	GCTCTTC	1 cut(s)	381
PctI	GAATGC	1 cut(s)	419
PfeI	GAWTC	3 cut(s)	14, 438, 537
PinAI	ACCGGT	1 cut(s)	398
PkrI	GCNGC	8 cut(s)	37, 40, 52, 183, 226, 670, 757, 801
PleI	GAGTC	1 cut(s)	696
PpsI	GAGTC	1 cut(s)	696
PpuMI	RGGWCCY	1 cut(s)	564
PscI	ACATGT	1 cut(s)	100
PsiI	TTATAA	1 cut(s)	372
Psp124BI	GAGCTC	1 cut(s)	642
Psp5II	RGGWCCY	1 cut(s)	564
Psp6I	CCWGG	1 cut(s)	117
PspGI	CCWGG	1 cut(s)	117
PspN4I	GGNNCC	2 cut(s)	308, 566
PspPI	GGNCC	3 cut(s)	564, 595, 653
PspPPI	RGGWCCY	1 cut(s)	564
PstNI	CAGNNNCTG	1 cut(s)	140
PvuII	CAGCTG	1 cut(s)	224
RsaI	GTAC	1 cut(s)	496
RsaNI	GTAC	1 cut(s)	495
SacI	GAGCTC	1 cut(s)	642
SapI	GCTCTTC	1 cut(s)	381
SaqAI	TTAA	2 cut(s)	168, 467
SatI	GCNGC	8 cut(s)	36, 39, 51, 182, 225, 669, 756, 800
Sau3AI	GATC	5 cut(s)	22, 69, 271, 712, 750
Sau96I	GGNCC	3 cut(s)	564, 595, 653
SchI	GAGTC	1 cut(s)	696
ScrFI	CCNGG	1 cut(s)	119
SduI	GDGCHC	2 cut(s)	592, 642
SfaNI	GCATC	1 cut(s)	37
SfcI	CTRYAG	1 cut(s)	219
SgrAI	CRCCGGYG	1 cut(s)	398
SinI	GGWCC	3 cut(s)	564, 595, 653
SmlI	CTYRAG	2 cut(s)	176, 773
SmoI	CTYRAG	2 cut(s)	176, 773
Sse9I	AATT	2 cut(s)	292, 675
SsiI	CCGC	7 cut(s)	5, 39, 51, 471, 491, 755, 799
SspMI	CTAG	1 cut(s)	20
SstI	GAGCTC	1 cut(s)	642
StyD4I	CCNGG	1 cut(s)	117
StyI	CCWWGG	3 cut(s)	406, 555, 656
TaaI	ACNGT	1 cut(s)	545
TasI	AATT	2 cut(s)	292, 675
TauI	GCSGC	4 cut(s)	41, 53, 758, 802
TfiI	GAWTC	3 cut(s)	14, 438, 537
Tru1I	TTAA	2 cut(s)	168, 467
Tru9I	TTAA	2 cut(s)	168, 467
TscAI	CASTG	1 cut(s)	597
TseFI	GTSAC	3 cut(s)	130, 235, 481
TseI	GCWGC	4 cut(s)	35, 181, 224, 668
Tsp45I	GTSAC	3 cut(s)	130, 235, 481
TspDTI	ATGAA	1 cut(s)	193
TspRI	CASTG	1 cut(s)	597
VneI	GTGCAC	1 cut(s)	588
VpaK11BI	GGWCC	3 cut(s)	564, 595, 653
XbaI	TCTAGA	1 cut(s)	19
XceI	RCATGY	1 cut(s)	104
XspI	CTAG	1 cut(s)	20

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.