Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0009390

Physical Location & Seq

Genomic Coordinates Forward (+)

41219947 .. 41223136

Gene Structure 3190 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1334900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 813 bp

ATGGCGGAAAATGATTCTCTTGCTCAGTTCCTCTCCTCCGCCGTTGATGCAGCCAAGAAAGCCGGCCAGATAATTCGAAAAGGGTTCTACGAGACCAAGCATGTGGAGCACAAAAGCCAGGTGGATTTGGTCACGGAAACTGATAAGGCATGCGAAGATCTAATATTTAATGATCTCAAGCAGCTTTACCCCACTCATAAGTTCATTGGGGAAGAGACTACTGCTGCTAATGGTGTAACGGAGCTGACTGATGACCACACATGGATAGTTGATCCCCTGGACGGAACCACTAACTTTGTACATGGGTTCCCCTTTGTCTGTGTGTCAATCGGCCTTACAATTGGAAAGATACCTACAGTTGGTGTTGTTTACAATCCAATAATTGACGAGCTCTTTACTGGCATACGTGGAGGAGGTGCATTTCTCAATGGAAATCCCATAAAAGTATCATCTAAGAACGAACTTGTGAAGTCTCTCCTTGCAACTGAGGTTGGAGTAAAACGTGATAACCTAACAGTGGATGCAACCACAGGGAGAATTAATCGCTTACTATTTAAGGTGAGATCTATTCGCATGAGCGGCTCCTGTGCACTGAACCTCTGTGGAATTGCATGCGGGAGGATTGATCTATTTTATGAGCTCGGCTTTGGGGGTCCTTGGGATGTTGCAGGTGGTGCTGTGATTGTTACAGAAGCTGGAGGGTGTGTGTATGATCCATCTGGTAAGGAGTTTGGCATCACATCTCAAAGAGTAGCAGCATCAAACCCTCTGCTTAAGGATGCATTTGTTGAGGTTTTGCGAGATTCGGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000287 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005975 GO:0005996 GO:0006020 GO:0006021 GO:0006066 GO:0006082 GO:0006732 GO:0006766 GO:0006767 GO:0006793 GO:0006796 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008934 GO:0009056 GO:0009058 GO:0009108 GO:0009110 GO:0009266 GO:0009409 GO:0009628 GO:0009987 GO:0010347 GO:0016020 GO:0016051 GO:0016053 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019203 GO:0019637 GO:0019751 GO:0019752 GO:0019852 GO:0019853 GO:0023052 GO:0034637 GO:0042364 GO:0042578 GO:0043167 GO:0043169 GO:0043436 GO:0043647 GO:0044237 GO:0044238 GO:0044249 GO:0044262 GO:0044281 GO:0044282 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046164 GO:0046165 GO:0046173 GO:0046174 GO:0046364 GO:0046394 GO:0046434 GO:0046838 GO:0046855 GO:0046872 GO:0050308 GO:0050789 GO:0050794 GO:0050896 GO:0051186 GO:0051188 GO:0051716 GO:0052745 GO:0052834 GO:0065007 GO:0070456 GO:0071545 GO:0071704 GO:0071944 GO:0080167 GO:1901575 GO:1901576 GO:1901615 GO:1901616 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00053 ko00562 ko01100 ko01110 ko04070 map00053 map00562 map01100 map01110 map04070

Pfam Domains

Protein Families

Inositol_P

Protein Analysis

271

Amino Acids

29.05

Weight (kDa)

5.22

Isoelectric Point (pI)

22.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inositol_P	PF00459	8 - 267	9.7e-81	Inositol monophosphatase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009390)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02870 AT3G02870 AT3G02870
fragaria_vesca	FvH4_3g00781
malus_domestica	MD05G1359400.v1.1 MD10G1334900.v1.1
prunus_persica	Prupe.4G008700_v2.0.a1
pyrus_communis	pycom05g32460 pycom10g28470
rosa_chinensis	RchiOBHm_Chr5g0001031 RchiOBHm_Chr6g0245961
rosa_laevigata	RLG00000030915
rosa_multiflora	Rmu_sc0000255.1_g000031 Rmu_sc0002281.1_g000006 Rmu_sc0004189.1_g000002
rosa_rugosa	Rorug04G0389100
rosa_samantha	Rh5AG008300 Rh5BG010400 Rh5CG009000 Rh5DG009200
rosa_wichuraiana	Rw5G000850 Rw6G002740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	659
Acc36I	ACCTGC	1 cut(s)	659
AccBSI	CCGCTC	1 cut(s)	579
AciI	CCGC	4 cut(s)	5, 39, 579, 615
AclWI	GGATC	2 cut(s)	266, 707
AcoI	YGGCCR	1 cut(s)	64
AfaI	GTAC	1 cut(s)	300
AfiI	CCNNNNNNNGG	3 cut(s)	281, 359, 517
AflII	CTTAAG	1 cut(s)	773
AjnI	CCWGG	2 cut(s)	117, 276
AluBI	AGCT	5 cut(s)	184, 244, 391, 640, 695
AluI	AGCT	5 cut(s)	184, 244, 391, 640, 695
Alw21I	GWGCWC	4 cut(s)	111, 393, 592, 642
Alw26I	GTCTC	3 cut(s)	86, 209, 477
Alw44I	GTGCAC	1 cut(s)	588
AlwI	GGATC	2 cut(s)	266, 707
AlwNI	CAGNNNCTG	1 cut(s)	695
AoxI	GGCC	2 cut(s)	64, 331
ApaLI	GTGCAC	1 cut(s)	588
ApeKI	GCWGC	4 cut(s)	50, 181, 224, 755
AseI	ATTAAT	1 cut(s)	540
AspS9I	GGNCC	1 cut(s)	653
AsuHPI	GGTGA	1 cut(s)	571
AsuII	TTCGAA	1 cut(s)	76
AvaII	GGWCC	1 cut(s)	653
BaeGI	GKGCMC	1 cut(s)	592
BanII	GRGCYC	2 cut(s)	393, 642
Bbv12I	GWGCWC	4 cut(s)	111, 393, 592, 642
BbvI	GCAGC	4 cut(s)	62, 193, 211, 767
BccI	CCATC	1 cut(s)	724
BceAI	ACGGC	1 cut(s)	26
BciT130I	CCWGG	2 cut(s)	119, 278
BcoDI	GTCTC	3 cut(s)	86, 209, 477
BfmI	CTRYAG	1 cut(s)	354
BfrI	CTTAAG	1 cut(s)	773
BfuAI	ACCTGC	1 cut(s)	659
BglII	AGATCT	2 cut(s)	157, 563
BisI	GCNGC	5 cut(s)	51, 182, 225, 580, 756
BlsI	GCNGC	5 cut(s)	52, 183, 226, 581, 757
Bme1390I	CCNGG	2 cut(s)	119, 278
Bme18I	GGWCC	1 cut(s)	653
BmgT120I	GGNCC	1 cut(s)	653
BmiI	GGNNCC	4 cut(s)	286, 308, 583, 654
BmrFI	CCNGG	2 cut(s)	119, 278
BmsI	GCATC	5 cut(s)	37, 511, 744, 767, 769
BpmI	CTGGAG	1 cut(s)	717
Bpu14I	TTCGAA	1 cut(s)	76
BpuEI	CTTGAG	1 cut(s)	161
BsaAI	YACGTR	1 cut(s)	407
BsaI	GGTCTC	1 cut(s)	86
BsaJI	CCNNGG	2 cut(s)	276, 656
BsaXI	ACNNNNNCTCC	2 cut(s)	690, 720
Bsc4I	CCNNNNNNNGG	3 cut(s)	281, 359, 517
Bse118I	RCCGGY	1 cut(s)	62
Bse1I	ACTGG	1 cut(s)	403
BseBI	CCWGG	2 cut(s)	119, 278
BseDI	CCNNGG	2 cut(s)	276, 656
BseGI	GGATG	3 cut(s)	526, 667, 784
BseLI	CCNNNNNNNGG	3 cut(s)	281, 359, 517
BseMII	CTCAG	2 cut(s)	38, 477
BseNI	ACTGG	1 cut(s)	403
BseRI	GAGGAG	2 cut(s)	25, 426
BseSI	GKGCMC	1 cut(s)	592
BseXI	GCAGC	4 cut(s)	62, 193, 211, 767
BshFI	GGCC	2 cut(s)	66, 333
BsiHKAI	GWGCWC	4 cut(s)	111, 393, 592, 642
BsiSI	CCGG	1 cut(s)	63
BslI	CCNNNNNNNGG	3 cut(s)	281, 359, 517
BsmAI	GTCTC	3 cut(s)	86, 209, 477
BsnI	GGCC	2 cut(s)	66, 333
Bso31I	GGTCTC	1 cut(s)	86
Bsp119I	TTCGAA	1 cut(s)	76
Bsp1286I	GDGCHC	4 cut(s)	111, 393, 592, 642
Bsp1407I	TGTACA	1 cut(s)	298
Bsp143I	GATC	6 cut(s)	157, 172, 271, 563, 625, 712
BspACI	CCGC	4 cut(s)	5, 39, 579, 615
BspANI	GGCC	2 cut(s)	66, 333
BspCNI	CTCAG	2 cut(s)	37, 478
BspLI	GGNNCC	4 cut(s)	286, 308, 583, 654
BspMI	ACCTGC	1 cut(s)	659
BspPI	GGATC	2 cut(s)	266, 707
BspT104I	TTCGAA	1 cut(s)	76
BspTI	CTTAAG	1 cut(s)	773
BspTNI	GGTCTC	1 cut(s)	86
BsrBI	CCGCTC	1 cut(s)	579
BsrFI	RCCGGY	1 cut(s)	62
BsrGI	TGTACA	1 cut(s)	298
BsrI	ACTGG	1 cut(s)	403
BssAI	RCCGGY	1 cut(s)	62
BssECI	CCNNGG	2 cut(s)	276, 656
BssMI	GATC	6 cut(s)	157, 172, 271, 563, 625, 712
BssT1I	CCWWGG	1 cut(s)	656
Bst2UI	CCWGG	2 cut(s)	119, 278
Bst4CI	ACNGT	2 cut(s)	358, 517
Bst6I	CTCTTC	1 cut(s)	207
BstAFI	CTTAAG	1 cut(s)	773
BstAPI	GCANNNNNTGC	1 cut(s)	674
BstAUI	TGTACA	1 cut(s)	298
BstBAI	YACGTR	1 cut(s)	407
BstBI	TTCGAA	1 cut(s)	76
BstC8I	GCNNGC	3 cut(s)	64, 151, 613
BstDEI	CTNAG	3 cut(s)	24, 453, 486
BstF5I	GGATG	3 cut(s)	526, 667, 784
BstKTI	GATC	6 cut(s)	160, 175, 274, 566, 628, 715
BstMAI	GTCTC	3 cut(s)	86, 209, 477
BstMBI	GATC	6 cut(s)	157, 172, 271, 563, 625, 712
BstMWI	GCNNNNNNNGC	5 cut(s)	47, 59, 106, 579, 674
BstNI	CCWGG	2 cut(s)	119, 278
BstNSI	RCATGY	3 cut(s)	104, 153, 615
BstSCI	CCNGG	2 cut(s)	117, 276
BstSFI	CTRYAG	1 cut(s)	354
BstSLI	GKGCMC	1 cut(s)	592
BstV1I	GCAGC	4 cut(s)	62, 193, 211, 767
BstX2I	RGATCY	2 cut(s)	157, 563
BstXI	CCANNNNNNTGG	1 cut(s)	103
BstYI	RGATCY	2 cut(s)	157, 563
BsuRI	GGCC	2 cut(s)	66, 333
BtsCI	GGATG	3 cut(s)	526, 667, 784
BtsIMutI	CAGTG	2 cut(s)	522, 590
BveI	ACCTGC	1 cut(s)	659
Cac8I	GCNNGC	3 cut(s)	64, 151, 613
CaiI	CAGNNNCTG	1 cut(s)	695
Cfr10I	RCCGGY	1 cut(s)	62
Cfr13I	GGNCC	1 cut(s)	653
Csp6I	GTAC	1 cut(s)	299
CspCI	CAANNNNNGTGG	2 cut(s)	277, 312
CviAII	CATG	6 cut(s)	101, 150, 261, 302, 574, 612
CviQI	GTAC	1 cut(s)	299
DdeI	CTNAG	3 cut(s)	24, 453, 486
DpnI	GATC	6 cut(s)	159, 174, 273, 565, 627, 714
DpnII	GATC	6 cut(s)	157, 172, 271, 563, 625, 712
EaeI	YGGCCR	1 cut(s)	64
Eam1104I	CTCTTC	1 cut(s)	207
EarI	CTCTTC	1 cut(s)	207
EciI	GGCGGA	2 cut(s)	20, 28
Ecl136II	GAGCTC	2 cut(s)	391, 640
Eco130I	CCWWGG	1 cut(s)	656
Eco24I	GRGCYC	2 cut(s)	393, 642
Eco31I	GGTCTC	1 cut(s)	86
Eco47I	GGWCC	1 cut(s)	653
Eco53kI	GAGCTC	2 cut(s)	391, 640
EcoICRI	GAGCTC	2 cut(s)	391, 640
EcoO109I	RGGNCCY	1 cut(s)	653
EcoRII	CCWGG	2 cut(s)	117, 276
EcoT14I	CCWWGG	1 cut(s)	656
EcoT22I	ATGCAT	1 cut(s)	784
EcoT38I	GRGCYC	2 cut(s)	393, 642
ErhI	CCWWGG	1 cut(s)	656
FaeI	CATG	6 cut(s)	104, 153, 264, 305, 577, 615
FatI	CATG	6 cut(s)	100, 149, 260, 301, 573, 611
FauI	CCCGC	1 cut(s)	608
Fnu4HI	GCNGC	5 cut(s)	51, 182, 225, 580, 756
FokI	GGATG	3 cut(s)	533, 674, 791
FriOI	GRGCYC	2 cut(s)	393, 642
Fsp4HI	GCNGC	5 cut(s)	51, 182, 225, 580, 756
GluI	GCNGC	5 cut(s)	51, 182, 225, 580, 756
GsuI	CTGGAG	1 cut(s)	717
HaeIII	GGCC	2 cut(s)	66, 333
HapII	CCGG	1 cut(s)	63
Hin1II	CATG	6 cut(s)	104, 153, 264, 305, 577, 615
HinfI	GANTC	2 cut(s)	14, 803
HpaII	CCGG	1 cut(s)	63
HphI	GGTGA	1 cut(s)	571
Hpy166II	GTNNAC	2 cut(s)	370, 590
Hpy188I	TCNGA	1 cut(s)	808
Hpy8I	GTNNAC	2 cut(s)	370, 590
HpyCH4III	ACNGT	2 cut(s)	358, 517
HpyCH4IV	ACGT	2 cut(s)	406, 502
HpyCH4V	TGCA	8 cut(s)	50, 419, 482, 524, 590, 611, 668, 782
HpyF10VI	GCNNNNNNNGC	5 cut(s)	47, 59, 106, 579, 674
HpyF3I	CTNAG	3 cut(s)	24, 453, 486
HpySE526I	ACGT	2 cut(s)	406, 502
Hsp92II	CATG	6 cut(s)	104, 153, 264, 305, 577, 615
KroI	GCCGGC	1 cut(s)	62
KroNI	GCCGGC	1 cut(s)	64
Kzo9I	GATC	6 cut(s)	157, 172, 271, 563, 625, 712
LmnI	GCTCC	3 cut(s)	106, 241, 587
Lsp1109I	GCAGC	4 cut(s)	62, 193, 211, 767
LweI	GCATC	5 cut(s)	37, 511, 744, 767, 769
MaeII	ACGT	2 cut(s)	406, 502
MaeIII	GTNAC	3 cut(s)	130, 235, 685
MalI	GATC	6 cut(s)	159, 174, 273, 565, 627, 714
MbiI	CCGCTC	1 cut(s)	579
MboI	GATC	6 cut(s)	157, 172, 271, 563, 625, 712
MboII	GAAGA	2 cut(s)	167, 224
MfeI	CAATTG	1 cut(s)	339
MflI	RGATCY	2 cut(s)	157, 563
MhlI	GDGCHC	4 cut(s)	111, 393, 592, 642
MluCI	AATT	5 cut(s)	72, 339, 381, 537, 606
MmeI	TCCRAC	1 cut(s)	472
Mph1103I	ATGCAT	1 cut(s)	784
MroNI	GCCGGC	1 cut(s)	62
MseI	TTAA	4 cut(s)	168, 540, 555, 774
MspCI	CTTAAG	1 cut(s)	773
MspI	CCGG	1 cut(s)	63
MspR9I	CCNGG	2 cut(s)	119, 278
MunI	CAATTG	1 cut(s)	339
MvaI	CCWGG	2 cut(s)	119, 278
MwoI	GCNNNNNNNGC	5 cut(s)	47, 59, 106, 579, 674
NaeI	GCCGGC	1 cut(s)	64
NdeII	GATC	6 cut(s)	157, 172, 271, 563, 625, 712
NgoMIV	GCCGGC	1 cut(s)	62
NlaIII	CATG	6 cut(s)	104, 153, 264, 305, 577, 615
NlaIV	GGNNCC	4 cut(s)	286, 308, 583, 654
NmeAIII	GCCGAG	1 cut(s)	621
NmuCI	GTSAC	1 cut(s)	130
NsiI	ATGCAT	1 cut(s)	784
NspI	RCATGY	3 cut(s)	104, 153, 615
NspV	TTCGAA	1 cut(s)	76
PaeI	GCATGC	2 cut(s)	153, 615
PaqCI	CACCTGC	1 cut(s)	659
PdiI	GCCGGC	1 cut(s)	64
PfeI	GAWTC	2 cut(s)	14, 803
PkrI	GCNGC	5 cut(s)	52, 183, 226, 581, 757
Ppu21I	YACGTR	1 cut(s)	407
PpuMI	RGGWCCY	1 cut(s)	653
PshBI	ATTAAT	1 cut(s)	540
Psp124BI	GAGCTC	2 cut(s)	393, 642
Psp5II	RGGWCCY	1 cut(s)	653
Psp6I	CCWGG	2 cut(s)	117, 276
PspGI	CCWGG	2 cut(s)	117, 276
PspN4I	GGNNCC	4 cut(s)	286, 308, 583, 654
PspPI	GGNCC	1 cut(s)	653
PspPPI	RGGWCCY	1 cut(s)	653
PstNI	CAGNNNCTG	1 cut(s)	695
PsuI	RGATCY	2 cut(s)	157, 563
RsaI	GTAC	1 cut(s)	300
RsaNI	GTAC	1 cut(s)	299
SacI	GAGCTC	2 cut(s)	393, 642
SaqAI	TTAA	4 cut(s)	168, 540, 555, 774
SatI	GCNGC	5 cut(s)	51, 182, 225, 580, 756
Sau3AI	GATC	6 cut(s)	157, 172, 271, 563, 625, 712
Sau96I	GGNCC	1 cut(s)	653
ScrFI	CCNGG	2 cut(s)	119, 278
SduI	GDGCHC	4 cut(s)	111, 393, 592, 642
SfaNI	GCATC	5 cut(s)	37, 511, 744, 767, 769
SfcI	CTRYAG	1 cut(s)	354
SfuI	TTCGAA	1 cut(s)	76
SinI	GGWCC	1 cut(s)	653
SmlI	CTYRAG	2 cut(s)	176, 773
SmoI	CTYRAG	2 cut(s)	176, 773
SphI	GCATGC	2 cut(s)	153, 615
Sse9I	AATT	5 cut(s)	72, 339, 381, 537, 606
SsiI	CCGC	4 cut(s)	5, 39, 579, 615
SspI	AATATT	1 cut(s)	165
SstI	GAGCTC	2 cut(s)	393, 642
StyD4I	CCNGG	2 cut(s)	117, 276
StyI	CCWWGG	1 cut(s)	656
TaaI	ACNGT	2 cut(s)	358, 517
TaiI	ACGT	2 cut(s)	409, 505
TaqI	TCGA	1 cut(s)	76
TasI	AATT	5 cut(s)	72, 339, 381, 537, 606
TatI	WGTACW	1 cut(s)	298
TauI	GCSGC	1 cut(s)	582
TfiI	GAWTC	2 cut(s)	14, 803
Tru1I	TTAA	4 cut(s)	168, 540, 555, 774
Tru9I	TTAA	4 cut(s)	168, 540, 555, 774
TscAI	CASTG	2 cut(s)	522, 597
TseFI	GTSAC	1 cut(s)	130
TseI	GCWGC	4 cut(s)	50, 181, 224, 755
Tsp45I	GTSAC	1 cut(s)	130
TspDTI	ATGAA	1 cut(s)	193
TspGWI	ACGGA	3 cut(s)	149, 254, 297
TspRI	CASTG	2 cut(s)	522, 597
Vha464I	CTTAAG	1 cut(s)	773
VneI	GTGCAC	1 cut(s)	588
VpaK11BI	GGWCC	1 cut(s)	653
VspI	ATTAAT	1 cut(s)	540
XceI	RCATGY	3 cut(s)	104, 153, 615
Zsp2I	ATGCAT	1 cut(s)	784

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.