Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009154

Physical Location & Seq

Genomic Coordinates Reverse (-)

670657 .. 672504

Gene Structure 1848 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G02980.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 744 bp

ATGTCGCGATTTCCTCGAAGATTCATAGATGATTCATCAATGGAAGATGCAGGAATCTCTCTTTGCCCAAGTATTCACTATAGACCTATAAACCCTAATGATCTAGATCGTTTGGAGCAAATCCATCGCGATATCTTCCCCATCAAGTATGAGTCTGAGTTTTTCCAGAGTGTTGTGAACGGAGTTGATATCGTCTCATGGGCTGCTGTTGATCGGAGCCGGCCTGATGATCACTCTGATGAACTTATTGGTTTTGTTACTGCCAAATTTGTGCTTGCCAAAGATAGCGAGATAGATGATCTTATACATTACGATTCCTCGAAAGGAGAGGAGACTTTGATATACATCTTGACACTCGGAGTTGTAGAAACATACAGAAACCGTGGAATCGCAATGTCACTTATTAGTGAGGTAATTAAATATGCTTCCGGTTTATCTGTGTGTCGCGGAGTTTACCTTCATGTGATTGCACACAACAATGCTGCGATCTGTTTGTACAAAAGATTGATGTTCAGATGCGTGCGGAGATTACATGGATTTTATCTAATCAATCGACATCATTTTGATGCGTTCTTGTTTGTCTACTTCATCAACGGTTCTCGAACTCCTTGCTCACCCTTAGAGGTGGCGATGTTTGTTGTGAATTATATGAAGAGTGGTATCAAGTCAGTGGCATCTAAGCTGGCTAACAAGGATGAGAAAGGTTTGAAATGGCTGTTTTGCAAAGACACGGATTGTGTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003674 GO:0003824 GO:0004402 GO:0004596 GO:0006323 GO:0006325 GO:0006333 GO:0006334 GO:0006464 GO:0006473 GO:0006474 GO:0006475 GO:0006807 GO:0006996 GO:0007049 GO:0007059 GO:0008080 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016043 GO:0016407 GO:0016410 GO:0016569 GO:0016570 GO:0016573 GO:0016740 GO:0016746 GO:0016747 GO:0017196 GO:0018193 GO:0018205 GO:0018206 GO:0018393 GO:0018394 GO:0019538 GO:0022414 GO:0022607 GO:0031365 GO:0031497 GO:0034212 GO:0034622 GO:0034728 GO:0036211 GO:0043170 GO:0043412 GO:0043543 GO:0043933 GO:0043966 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0051276 GO:0051321 GO:0051604 GO:0061733 GO:0065003 GO:0065004 GO:0071103 GO:0071704 GO:0071824 GO:0071840 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acetyltransf_1

Protein Analysis

247

Amino Acids

28.31

Weight (kDa)

6.75

Isoelectric Point (pI)

43.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Acetyltransf_1	PF00583	30 - 99	3.7e-09	Acetyltransferase (GNAT) family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009154)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02980 AT3G02980 AT5G16800 AT5G16800 AT5G16800
fragaria_vesca	FvH4_7g34080 FvH4_7g34080
malus_domestica	MD01G1237100.v1.1 MD07G1309700.v1.1
prunus_persica	Prupe.2G327400_v2.0.a1
pyrus_communis	pycom01g24490
rosa_chinensis	RchiOBHm_Chr1g0384361
rosa_laevigata	RLG00000026045
rosa_multiflora	Rmu_sc0016737.1_g000007
rosa_roxburghii	Rroxscaffold_4G00276740
rosa_rugosa	Rorug01G0447000 Rorug01G0447000 Rorug01G0447100 Rorug01G0447200 Rorug01G0447200
rosa_samantha	Rh1CG443200
rosa_wichuraiana	Rw1G040010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	582
AccII	CGCG	3 cut(s)	7, 129, 447
AciI	CCGC	2 cut(s)	447, 523
AcsI	RAATTY	1 cut(s)	266
AfaI	GTAC	1 cut(s)	497
AgsI	TTSAA	1 cut(s)	709
AluBI	AGCT	1 cut(s)	682
AluI	AGCT	1 cut(s)	682
Alw26I	GTCTC	2 cut(s)	199, 326
AoxI	GGCC	1 cut(s)	221
ApeKI	GCWGC	2 cut(s)	203, 482
ApoI	RAATTY	1 cut(s)	266
AsuHPI	GGTGA	1 cut(s)	606
BbvI	GCAGC	2 cut(s)	190, 469
BccI	CCATC	2 cut(s)	132, 149
BcgI	CGANNNNNNTGC	4 cut(s)	107, 141, 591, 625
BclI	TGATCA	1 cut(s)	229
BcoDI	GTCTC	2 cut(s)	199, 326
BfaI	CTAG	1 cut(s)	104
BfmI	CTRYAG	1 cut(s)	79
BisI	GCNGC	2 cut(s)	204, 483
BlsI	GCNGC	2 cut(s)	205, 484
BmiI	GGNNCC	1 cut(s)	218
BmsI	GCATC	4 cut(s)	37, 506, 556, 683
BsaBI	GATNNNNATC	2 cut(s)	105, 344
BsaJI	CCNNGG	1 cut(s)	382
BsaWI	WCCGGW	1 cut(s)	428
Bse118I	RCCGGY	1 cut(s)	219
Bse3DI	GCAATG	1 cut(s)	399
Bse8I	GATNNNNATC	2 cut(s)	105, 344
BseDI	CCNNGG	1 cut(s)	382
BseGI	GGATG	1 cut(s)	700
BseJI	GATNNNNATC	2 cut(s)	105, 344
BseMI	GCAATG	1 cut(s)	399
BseMII	CTCAG	1 cut(s)	147
BseRI	GAGGAG	1 cut(s)	344
BseXI	GCAGC	2 cut(s)	190, 469
Bsh1236I	CGCG	3 cut(s)	7, 129, 447
BshFI	GGCC	1 cut(s)	223
BsiSI	CCGG	2 cut(s)	220, 429
BsmAI	GTCTC	2 cut(s)	199, 326
BsmBI	CGTCTC	1 cut(s)	199
BsnI	GGCC	1 cut(s)	223
Bsp1407I	TGTACA	1 cut(s)	495
Bsp143I	GATC	6 cut(s)	100, 106, 211, 229, 298, 486
Bsp68I	TCGCGA	2 cut(s)	7, 129
BspACI	CCGC	2 cut(s)	447, 523
BspANI	GGCC	1 cut(s)	223
BspCNI	CTCAG	1 cut(s)	148
BspFNI	CGCG	3 cut(s)	7, 129, 447
BspLI	GGNNCC	1 cut(s)	218
BsrDI	GCAATG	1 cut(s)	399
BsrFI	RCCGGY	1 cut(s)	219
BsrGI	TGTACA	1 cut(s)	495
BssAI	RCCGGY	1 cut(s)	219
BssECI	CCNNGG	1 cut(s)	382
BssMI	GATC	6 cut(s)	100, 106, 211, 229, 298, 486
Bst4CI	ACNGT	2 cut(s)	383, 596
Bst6I	CTCTTC	1 cut(s)	647
BstAUI	TGTACA	1 cut(s)	495
BstC8I	GCNNGC	4 cut(s)	221, 276, 521, 684
BstDEI	CTNAG	3 cut(s)	156, 619, 678
BstDSI	CCRYGG	1 cut(s)	382
BstF5I	GGATG	1 cut(s)	700
BstFNI	CGCG	3 cut(s)	7, 129, 447
BstKTI	GATC	6 cut(s)	103, 109, 214, 232, 301, 489
BstMAI	GTCTC	2 cut(s)	199, 326
BstMBI	GATC	6 cut(s)	100, 106, 211, 229, 298, 486
BstSFI	CTRYAG	1 cut(s)	79
BstUI	CGCG	3 cut(s)	7, 129, 447
BstV1I	GCAGC	2 cut(s)	190, 469
BsuRI	GGCC	1 cut(s)	223
BtgI	CCRYGG	1 cut(s)	382
BtgZI	GCGATG	2 cut(s)	110, 644
BtsCI	GGATG	1 cut(s)	700
BtsIMutI	CAGTG	1 cut(s)	675
BtuMI	TCGCGA	2 cut(s)	7, 129
Cac8I	GCNNGC	4 cut(s)	221, 276, 521, 684
Cfr10I	RCCGGY	1 cut(s)	219
Csp6I	GTAC	1 cut(s)	496
CviAII	CATG	3 cut(s)	198, 461, 533
CviJI	RGCY	6 cut(s)	203, 219, 223, 682, 686, 715
CviKI_1	RGCY	6 cut(s)	203, 219, 223, 682, 686, 715
CviQI	GTAC	1 cut(s)	496
DdeI	CTNAG	3 cut(s)	156, 619, 678
DpnI	GATC	6 cut(s)	102, 108, 213, 231, 300, 488
DpnII	GATC	6 cut(s)	100, 106, 211, 229, 298, 486
Eam1104I	CTCTTC	1 cut(s)	647
EarI	CTCTTC	1 cut(s)	647
Eco32I	GATATC	2 cut(s)	133, 190
EcoRV	GATATC	2 cut(s)	133, 190
Esp3I	CGTCTC	1 cut(s)	199
FaeI	CATG	3 cut(s)	201, 464, 536
FatI	CATG	3 cut(s)	197, 460, 532
FbaI	TGATCA	1 cut(s)	229
FblI	GTMKAC	1 cut(s)	582
Fnu4HI	GCNGC	2 cut(s)	204, 483
FokI	GGATG	1 cut(s)	707
Fsp4HI	GCNGC	2 cut(s)	204, 483
FspBI	CTAG	1 cut(s)	104
GluI	GCNGC	2 cut(s)	204, 483
HaeIII	GGCC	1 cut(s)	223
HapII	CCGG	2 cut(s)	220, 429
Hin1II	CATG	3 cut(s)	201, 464, 536
HinfI	GANTC	6 cut(s)	21, 32, 54, 152, 314, 387
HpaII	CCGG	2 cut(s)	220, 429
HphI	GGTGA	1 cut(s)	606
Hpy166II	GTNNAC	3 cut(s)	178, 454, 583
Hpy188I	TCNGA	5 cut(s)	157, 216, 238, 359, 515
Hpy188III	TCNNGA	6 cut(s)	6, 104, 128, 166, 349, 600
Hpy8I	GTNNAC	3 cut(s)	178, 454, 583
HpyAV	CCTTC	1 cut(s)	467
HpyCH4III	ACNGT	2 cut(s)	383, 596
HpyCH4V	TGCA	3 cut(s)	50, 470, 723
HpyF3I	CTNAG	3 cut(s)	156, 619, 678
Hsp92II	CATG	3 cut(s)	201, 464, 536
KroI	GCCGGC	1 cut(s)	219
KroNI	GCCGGC	1 cut(s)	221
Ksp22I	TGATCA	1 cut(s)	229
Kzo9I	GATC	6 cut(s)	100, 106, 211, 229, 298, 486
LmnI	GCTCC	2 cut(s)	115, 216
LpnPI	CCDG	6 cut(s)	36, 179, 233, 237, 442, 668
Lsp1109I	GCAGC	2 cut(s)	190, 469
LweI	GCATC	4 cut(s)	37, 506, 556, 683
MaeI	CTAG	1 cut(s)	104
MaeIII	GTNAC	2 cut(s)	256, 396
MalI	GATC	6 cut(s)	102, 108, 213, 231, 300, 488
MboI	GATC	6 cut(s)	100, 106, 211, 229, 298, 486
MboII	GAAGA	4 cut(s)	30, 56, 127, 664
MluCI	AATT	3 cut(s)	266, 414, 643
MlyI	GAGTC	1 cut(s)	161
MnlI	CCTC	5 cut(s)	24, 322, 328, 403, 616
MroNI	GCCGGC	1 cut(s)	219
MseI	TTAA	1 cut(s)	417
MslI	CAYNNNNRTG	3 cut(s)	237, 477, 564
MspI	CCGG	2 cut(s)	220, 429
MvnI	CGCG	3 cut(s)	7, 129, 447
NaeI	GCCGGC	1 cut(s)	221
NdeII	GATC	6 cut(s)	100, 106, 211, 229, 298, 486
NgoMIV	GCCGGC	1 cut(s)	219
NlaIII	CATG	3 cut(s)	201, 464, 536
NlaIV	GGNNCC	1 cut(s)	218
NmuCI	GTSAC	1 cut(s)	396
NruI	TCGCGA	2 cut(s)	7, 129
PdiI	GCCGGC	1 cut(s)	221
PfeI	GAWTC	5 cut(s)	21, 32, 54, 314, 387
PkrI	GCNGC	2 cut(s)	205, 484
PleI	GAGTC	1 cut(s)	160
PpsI	GAGTC	1 cut(s)	160
PspN4I	GGNNCC	1 cut(s)	218
RruI	TCGCGA	2 cut(s)	7, 129
RsaI	GTAC	1 cut(s)	497
RsaNI	GTAC	1 cut(s)	496
RseI	CAYNNNNRTG	3 cut(s)	237, 477, 564
SaqAI	TTAA	1 cut(s)	417
SatI	GCNGC	2 cut(s)	204, 483
Sau3AI	GATC	6 cut(s)	100, 106, 211, 229, 298, 486
SchI	GAGTC	1 cut(s)	161
SetI	ASST	6 cut(s)	88, 414, 459, 627, 684, 706
SfaNI	GCATC	4 cut(s)	37, 506, 556, 683
SfcI	CTRYAG	1 cut(s)	79
SmiMI	CAYNNNNRTG	3 cut(s)	237, 477, 564
Sse9I	AATT	3 cut(s)	266, 414, 643
SsiI	CCGC	2 cut(s)	447, 523
SspMI	CTAG	1 cut(s)	104
TaaI	ACNGT	2 cut(s)	383, 596
TaqI	TCGA	4 cut(s)	16, 320, 553, 601
TasI	AATT	3 cut(s)	266, 414, 643
TatI	WGTACW	1 cut(s)	495
TfiI	GAWTC	5 cut(s)	21, 32, 54, 314, 387
Tru1I	TTAA	1 cut(s)	417
Tru9I	TTAA	1 cut(s)	417
TscAI	CASTG	1 cut(s)	675
TseFI	GTSAC	1 cut(s)	396
TseI	GCWGC	2 cut(s)	203, 482
Tsp45I	GTSAC	1 cut(s)	396
TspDTI	ATGAA	6 cut(s)	13, 24, 255, 449, 577, 665
TspGWI	ACGGA	1 cut(s)	195
TspRI	CASTG	1 cut(s)	675
XapI	RAATTY	1 cut(s)	266
XbaI	TCTAGA	1 cut(s)	103
XmiI	GTMKAC	1 cut(s)	582
XspI	CTAG	1 cut(s)	104

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.