Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0009154

Physical Location & Seq

Genomic Coordinates Forward (+)

30161523 .. 30163694

Gene Structure 2172 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G327400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 852 bp

ATGTGGCATAAATGGAAGGAGAAATTCATGTGCAAATTCTCCAAGTCTATCAAATTTTTGCAGGGGATTGACCACACAATCCCAATGGTGAACCCAAAACTTTCCCGCCGTCCAACCATATCCTACAGGCCTATACAACCATCTGACCTTGAGATCTTAGAGCAAATCCATGCTGATTTATTTCCCATTAGGTATGAGGCTGAGTTTTTTCAAAATGTAGTCAATGGACATGATATTGTGTCATGGGCAGCTGTTGATCGAAGTCGTCCAAATGGTCAAAGTGATGAACTTATTGGATTTGTAACCGCCCGAATTGTTCTTGCCAAAGAAAGTGAGATAGGGGATCTGCTCAGTTACGAACCGTCAAAATCAGATCAGACATTAATCTACATTCTGACACTGGGAGTTGTAGAATCTTTCAGAAATCTTGGCATAGCTTCAGCACTTATTCGTGAGGTCATAAAATATGCCTCAAGTATTCCAACCTGCCGAGGAATTTACTTGCATGTCATTTCTTACAATAATGCGGCAATCCATTTGTACAAGAAAATGTCATTCATGTGTGTAAGAAGGTTGCAAGGCTTTTACTTGATCAATGGTCAGCATTATGATTCGTATCTGTTTGTTTACTATGTAAATGGTGGCCGATCTCCTTGTTCACCATTAGAGCTTGTTACAGGGACGCTGAATTTGATGAGGAATGGGCTTAAGTCTGTGTTTGCAAGGCTACGGAAGAAGGAAGACAGGAAGGTCTCAAAATGGGGGAAATGTAAAGAAACGCATTGCCTTATATCGACTACACAAAGCAGGAGAAACCTGACAACGGAGTGTACAGGGTATGAGTGTGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003674 GO:0003824 GO:0004402 GO:0004596 GO:0006323 GO:0006325 GO:0006333 GO:0006334 GO:0006464 GO:0006473 GO:0006474 GO:0006475 GO:0006807 GO:0006996 GO:0007049 GO:0007059 GO:0008080 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016043 GO:0016407 GO:0016410 GO:0016569 GO:0016570 GO:0016573 GO:0016740 GO:0016746 GO:0016747 GO:0017196 GO:0018193 GO:0018205 GO:0018206 GO:0018393 GO:0018394 GO:0019538 GO:0022414 GO:0022607 GO:0031365 GO:0031497 GO:0034212 GO:0034622 GO:0034728 GO:0036211 GO:0043170 GO:0043412 GO:0043543 GO:0043933 GO:0043966 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0051276 GO:0051321 GO:0051604 GO:0061733 GO:0065003 GO:0065004 GO:0071103 GO:0071704 GO:0071824 GO:0071840 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acetyltransf_1

Protein Analysis

284

Amino Acids

32.53

Weight (kDa)

9.31

Isoelectric Point (pI)

46.32

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009154)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02980 AT3G02980 AT5G16800 AT5G16800 AT5G16800
fragaria_vesca	FvH4_7g34080 FvH4_7g34080
malus_domestica	MD01G1237100.v1.1 MD07G1309700.v1.1
prunus_persica	Prupe.2G327400_v2.0.a1
pyrus_communis	pycom01g24490
rosa_chinensis	RchiOBHm_Chr1g0384361
rosa_laevigata	RLG00000026045
rosa_multiflora	Rmu_sc0016737.1_g000007
rosa_roxburghii	Rroxscaffold_4G00276740
rosa_rugosa	Rorug01G0447000 Rorug01G0447000 Rorug01G0447100 Rorug01G0447200 Rorug01G0447200
rosa_samantha	Rh1CG443200
rosa_wichuraiana	Rw1G040010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	749
Acc36I	ACCTGC	1 cut(s)	494
AciI	CCGC	3 cut(s)	106, 306, 527
AclWI	GGATC	1 cut(s)	351
AcoI	YGGCCR	1 cut(s)	643
AcsI	RAATTY	5 cut(s)	23, 35, 53, 495, 688
AcuI	CTGAAG	1 cut(s)	423
AfaI	GTAC	2 cut(s)	542, 832
AfiI	CCNNNNNNNGG	1 cut(s)	823
AflII	CTTAAG	1 cut(s)	707
AgsI	TTSAA	1 cut(s)	212
AluBI	AGCT	3 cut(s)	251, 437, 670
AluI	AGCT	3 cut(s)	251, 437, 670
Alw26I	GTCTC	1 cut(s)	757
AlwI	GGATC	1 cut(s)	351
AoxI	GGCC	2 cut(s)	128, 643
ApeKI	GCWGC	1 cut(s)	248
ApoI	RAATTY	5 cut(s)	23, 35, 53, 495, 688
ArsI	GACNNNNNNTTYG	2 cut(s)	673, 705
AseI	ATTAAT	1 cut(s)	383
AsuHPI	GGTGA	2 cut(s)	100, 651
BbsI	GAAGAC	1 cut(s)	747
BbvI	GCAGC	1 cut(s)	260
BccI	CCATC	1 cut(s)	148
BceAI	ACGGC	1 cut(s)	93
BclI	TGATCA	1 cut(s)	591
BcoDI	GTCTC	1 cut(s)	757
BfmI	CTRYAG	1 cut(s)	124
BfrI	CTTAAG	1 cut(s)	707
BfuAI	ACCTGC	1 cut(s)	494
BglII	AGATCT	1 cut(s)	153
BisI	GCNGC	2 cut(s)	249, 528
BlsI	GCNGC	2 cut(s)	250, 529
BmrI	ACTGGG	1 cut(s)	410
BmuI	ACTGGG	1 cut(s)	410
BpiI	GAAGAC	1 cut(s)	747
BpuEI	CTTGAG	2 cut(s)	170, 457
BsaBI	GATNNNNATC	1 cut(s)	615
BsaI	GGTCTC	1 cut(s)	757
BsaJI	CCNNGG	1 cut(s)	490
Bsc4I	CCNNNNNNNGG	1 cut(s)	823
Bse1I	ACTGG	1 cut(s)	405
Bse3DI	GCAATG	1 cut(s)	781
Bse8I	GATNNNNATC	1 cut(s)	615
BseDI	CCNNGG	1 cut(s)	490
BseJI	GATNNNNATC	1 cut(s)	615
BseLI	CCNNNNNNNGG	1 cut(s)	823
BseMI	GCAATG	1 cut(s)	781
BseMII	CTCAG	2 cut(s)	192, 364
BseNI	ACTGG	1 cut(s)	405
BseXI	GCAGC	1 cut(s)	260
BshFI	GGCC	2 cut(s)	130, 645
BslFI	GGGAC	1 cut(s)	694
BslI	CCNNNNNNNGG	1 cut(s)	823
BsmAI	GTCTC	1 cut(s)	757
BsmFI	GGGAC	1 cut(s)	694
BsnI	GGCC	2 cut(s)	130, 645
Bso31I	GGTCTC	1 cut(s)	757
Bsp1407I	TGTACA	2 cut(s)	540, 830
Bsp143I	GATC	6 cut(s)	153, 256, 343, 373, 591, 647
BspACI	CCGC	3 cut(s)	106, 306, 527
BspANI	GGCC	2 cut(s)	130, 645
BspCNI	CTCAG	2 cut(s)	193, 363
BspMI	ACCTGC	1 cut(s)	494
BspPI	GGATC	1 cut(s)	351
BspTI	CTTAAG	1 cut(s)	707
BspTNI	GGTCTC	1 cut(s)	757
BsrDI	GCAATG	1 cut(s)	781
BsrGI	TGTACA	2 cut(s)	540, 830
BsrI	ACTGG	1 cut(s)	405
BssECI	CCNNGG	1 cut(s)	490
BssMI	GATC	6 cut(s)	153, 256, 343, 373, 591, 647
Bst4CI	ACNGT	1 cut(s)	363
BstAFI	CTTAAG	1 cut(s)	707
BstAUI	TGTACA	2 cut(s)	540, 830
BstDEI	CTNAG	3 cut(s)	157, 201, 350
BstKTI	GATC	6 cut(s)	156, 259, 346, 376, 594, 650
BstMAI	GTCTC	1 cut(s)	757
BstMBI	GATC	6 cut(s)	153, 256, 343, 373, 591, 647
BstNSI	RCATGY	1 cut(s)	509
BstSFI	CTRYAG	1 cut(s)	124
BstV1I	GCAGC	1 cut(s)	260
BstV2I	GAAGAC	1 cut(s)	747
BstX2I	RGATCY	2 cut(s)	153, 343
BstYI	RGATCY	2 cut(s)	153, 343
BsuRI	GGCC	2 cut(s)	130, 645
BtsIMutI	CAGTG	1 cut(s)	398
BveI	ACCTGC	1 cut(s)	494
CseI	GACGC	1 cut(s)	691
Csp6I	GTAC	2 cut(s)	541, 831
CviAII	CATG	6 cut(s)	28, 170, 230, 243, 506, 559
CviJI	RGCY	9 cut(s)	130, 200, 251, 437, 582, 645, 670, 706, 727
CviKI_1	RGCY	9 cut(s)	130, 200, 251, 437, 582, 645, 670, 706, 727
CviQI	GTAC	2 cut(s)	541, 831
DdeI	CTNAG	3 cut(s)	157, 201, 350
DpnI	GATC	6 cut(s)	155, 258, 345, 375, 593, 649
DpnII	GATC	6 cut(s)	153, 256, 343, 373, 591, 647
DrdI	GACNNNNNNGTC	1 cut(s)	749
DseDI	GACNNNNNNGTC	1 cut(s)	749
EaeI	YGGCCR	1 cut(s)	643
Eco147I	AGGCCT	1 cut(s)	130
Eco31I	GGTCTC	1 cut(s)	757
Eco57I	CTGAAG	1 cut(s)	423
FaeI	CATG	6 cut(s)	31, 173, 233, 246, 509, 562
FaqI	GGGAC	1 cut(s)	694
FatI	CATG	6 cut(s)	27, 169, 229, 242, 505, 558
FauI	CCCGC	1 cut(s)	113
FbaI	TGATCA	1 cut(s)	591
Fnu4HI	GCNGC	2 cut(s)	249, 528
Fsp4HI	GCNGC	2 cut(s)	249, 528
GluI	GCNGC	2 cut(s)	249, 528
HaeIII	GGCC	2 cut(s)	130, 645
HgaI	GACGC	1 cut(s)	691
Hin1II	CATG	6 cut(s)	31, 173, 233, 246, 509, 562
HinfI	GANTC	2 cut(s)	413, 611
HphI	GGTGA	2 cut(s)	100, 651
Hpy166II	GTNNAC	4 cut(s)	91, 628, 659, 831
Hpy188I	TCNGA	5 cut(s)	145, 373, 378, 396, 422
Hpy188III	TCNNGA	1 cut(s)	452
Hpy8I	GTNNAC	4 cut(s)	91, 628, 659, 831
HpyAV	CCTTC	4 cut(s)	10, 564, 730, 742
HpyCH4III	ACNGT	1 cut(s)	363
HpyCH4V	TGCA	5 cut(s)	33, 61, 505, 577, 722
HpyF3I	CTNAG	3 cut(s)	157, 201, 350
Hsp92II	CATG	6 cut(s)	31, 173, 233, 246, 509, 562
Ksp22I	TGATCA	1 cut(s)	591
Kzo9I	GATC	6 cut(s)	153, 256, 343, 373, 591, 647
LpnPI	CCDG	9 cut(s)	47, 112, 386, 499, 663, 730, 793, 819, 830
Lsp1109I	GCAGC	1 cut(s)	260
MaeIII	GTNAC	3 cut(s)	301, 353, 673
MalI	GATC	6 cut(s)	155, 258, 345, 375, 593, 649
MboI	GATC	6 cut(s)	153, 256, 343, 373, 591, 647
MboII	GAAGA	2 cut(s)	745, 752
MflI	RGATCY	2 cut(s)	153, 343
MluCI	AATT	6 cut(s)	23, 35, 53, 312, 495, 688
MmeI	TCCRAC	2 cut(s)	137, 506
MnlI	CCTC	5 cut(s)	190, 448, 481, 485, 690
MseI	TTAA	2 cut(s)	383, 708
MslI	CAYNNNNRTG	1 cut(s)	559
MspA1I	CMGCKG	1 cut(s)	251
MspCI	CTTAAG	1 cut(s)	707
NdeII	GATC	6 cut(s)	153, 256, 343, 373, 591, 647
NlaIII	CATG	6 cut(s)	31, 173, 233, 246, 509, 562
NmeAIII	GCCGAG	1 cut(s)	515
NspI	RCATGY	1 cut(s)	509
PceI	AGGCCT	1 cut(s)	130
PfeI	GAWTC	2 cut(s)	413, 611
PkrI	GCNGC	2 cut(s)	250, 529
PshBI	ATTAAT	1 cut(s)	383
PsuI	RGATCY	2 cut(s)	153, 343
PvuII	CAGCTG	1 cut(s)	251
RsaI	GTAC	2 cut(s)	542, 832
RsaNI	GTAC	2 cut(s)	541, 831
RseI	CAYNNNNRTG	1 cut(s)	559
SaqAI	TTAA	2 cut(s)	383, 708
SatI	GCNGC	2 cut(s)	249, 528
Sau3AI	GATC	6 cut(s)	153, 256, 343, 373, 591, 647
SfcI	CTRYAG	1 cut(s)	124
SmiMI	CAYNNNNRTG	1 cut(s)	559
SmlI	CTYRAG	3 cut(s)	149, 472, 707
SmoI	CTYRAG	3 cut(s)	149, 472, 707
Sse9I	AATT	6 cut(s)	23, 35, 53, 312, 495, 688
SseBI	AGGCCT	1 cut(s)	130
SsiI	CCGC	3 cut(s)	106, 306, 527
StuI	AGGCCT	1 cut(s)	130
TaaI	ACNGT	1 cut(s)	363
TaqI	TCGA	2 cut(s)	259, 794
TasI	AATT	6 cut(s)	23, 35, 53, 312, 495, 688
TatI	WGTACW	2 cut(s)	540, 830
TauI	GCSGC	1 cut(s)	530
TfiI	GAWTC	2 cut(s)	413, 611
Tru1I	TTAA	2 cut(s)	383, 708
Tru9I	TTAA	2 cut(s)	383, 708
TscAI	CASTG	1 cut(s)	405
TseI	GCWGC	1 cut(s)	248
TspDTI	ATGAA	3 cut(s)	16, 300, 547
TspGWI	ACGGA	2 cut(s)	745, 839
TspRI	CASTG	1 cut(s)	405
Vha464I	CTTAAG	1 cut(s)	707
VspI	ATTAAT	1 cut(s)	383
XapI	RAATTY	5 cut(s)	23, 35, 53, 495, 688
XceI	RCATGY	1 cut(s)	509

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.