Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0009154

Physical Location & Seq

Genomic Coordinates Forward (+)

32421522 .. 32424967

Gene Structure 3446 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1237100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 855 bp

ATGTGGCATAAATGGAAGGAGAAGTTCATGAGCAAATTATCCAAGTATATCAAGTATTTGCTGGGGATTGACAACACAATCCCAATGGTGAACCCAAAACTTCCCCGTCGTCCAGCCATATCCTATAGGCCTATACAACCTTCTGACCTTGAGATCTTAGAGAAAATCCATGACGATTTATTTCCCATTAGGTACGAGGCTGAGTTTTTCCAAAATGTCGTCAATGGACATGATATTGTGTCATGGGCAGCTGTTGATCGAAGTCGTCCAAATGGTCAAGGTGATGAACTTATTGGATTTGTAACCGCACGAATTGTTCTTGCAAGAGAAAGTGAGATAGGGGATTTGCTCAGTTTCGACTCATCAAATTCAGATCAGACATTAGTCTACATTTTGACACTGGGAGTAGTAGAATCTTTCAGAAATCTTGGCATAGCTTCAGCACTTATTCGTGAGGTCATAAAATATGCCTCAAGTATTCCAACCTGCAGAGCAATTTACTTGCATGTCATTTCTTACAATAATTCTGCAATCCATTTGTACAAGAAAATGTCATTCATGTGTGTCAGAAGGTTGCAAGGCTTTTACTTGATCAATGGTCAGCATTATGATTCATATCTGTTTGTGTACTATGTAAATGGTGGCCGATCTCCTTGCTCGCCATTGGAGCTGGTTACAGGGACGCTGAATTTTATGAGGAATGGTCTTAAGTCTGTGTTTGCAATGCTACGGAAGAATGAAGACAGGAAGGTGTCAAAGTGGGCAAAATGTAAAGAAAACCATAGCCTTATATCGACCGGACCAAACAGGAGAAACCTGACTGCGGCAGAGTGTACAGGGTACGAGTGTGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003674 GO:0003824 GO:0004402 GO:0004596 GO:0006323 GO:0006325 GO:0006333 GO:0006334 GO:0006464 GO:0006473 GO:0006474 GO:0006475 GO:0006807 GO:0006996 GO:0007049 GO:0007059 GO:0008080 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016043 GO:0016407 GO:0016410 GO:0016569 GO:0016570 GO:0016573 GO:0016740 GO:0016746 GO:0016747 GO:0017196 GO:0018193 GO:0018205 GO:0018206 GO:0018393 GO:0018394 GO:0019538 GO:0022414 GO:0022607 GO:0031365 GO:0031497 GO:0034212 GO:0034622 GO:0034728 GO:0036211 GO:0043170 GO:0043412 GO:0043543 GO:0043933 GO:0043966 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0051276 GO:0051321 GO:0051604 GO:0061733 GO:0065003 GO:0065004 GO:0071103 GO:0071704 GO:0071824 GO:0071840 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acetyltransf_1

Protein Analysis

285

Amino Acids

32.52

Weight (kDa)

9.19

Isoelectric Point (pI)

41.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Acetyltransf_1	PF00583	65 - 186	7.8e-14	Acetyltransferase (GNAT) family
Acetyltransf_7	PF13508	102 - 186	1.4e-06	Acetyltransferase (GNAT) domain
Acetyltransf_4	PF13420	136 - 206	1.9e-07	Acetyltransferase (GNAT) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009154)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02980 AT3G02980 AT5G16800 AT5G16800 AT5G16800
fragaria_vesca	FvH4_7g34080 FvH4_7g34080
malus_domestica	MD01G1237100.v1.1 MD07G1309700.v1.1
prunus_persica	Prupe.2G327400_v2.0.a1
pyrus_communis	pycom01g24490
rosa_chinensis	RchiOBHm_Chr1g0384361
rosa_laevigata	RLG00000026045
rosa_multiflora	Rmu_sc0016737.1_g000007
rosa_roxburghii	Rroxscaffold_4G00276740
rosa_rugosa	Rorug01G0447000 Rorug01G0447000 Rorug01G0447100 Rorug01G0447200 Rorug01G0447200
rosa_samantha	Rh1CG443200
rosa_wichuraiana	Rw1G040010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	494
AccI	GTMKAC	1 cut(s)	387
AciI	CCGC	2 cut(s)	306, 824
AcoI	YGGCCR	1 cut(s)	643
AcsI	RAATTY	2 cut(s)	367, 688
AcuI	CTGAAG	1 cut(s)	423
AfaI	GTAC	5 cut(s)	194, 542, 629, 835, 842
AfiI	CCNNNNNNNGG	1 cut(s)	823
AflII	CTTAAG	1 cut(s)	707
AluBI	AGCT	3 cut(s)	251, 437, 670
AluI	AGCT	3 cut(s)	251, 437, 670
AoxI	GGCC	2 cut(s)	128, 643
ApeKI	GCWGC	1 cut(s)	248
ApoI	RAATTY	2 cut(s)	367, 688
AspS9I	GGNCC	1 cut(s)	800
AsuHPI	GGTGA	2 cut(s)	100, 293
AvaII	GGWCC	1 cut(s)	800
BaeI	ACNNNNGTAYC	1 cut(s)	832
BbsI	GAAGAC	1 cut(s)	747
BbvI	GCAGC	1 cut(s)	260
BcgI	CGANNNNNNTGC	2 cut(s)	636, 670
BclI	TGATCA	1 cut(s)	591
BfmI	CTRYAG	2 cut(s)	124, 487
BfrI	CTTAAG	1 cut(s)	707
BfuAI	ACCTGC	1 cut(s)	494
BglII	AGATCT	1 cut(s)	153
BisI	GCNGC	2 cut(s)	249, 825
BlsI	GCNGC	2 cut(s)	250, 826
Bme18I	GGWCC	1 cut(s)	800
BmgT120I	GGNCC	1 cut(s)	800
BmrI	ACTGGG	1 cut(s)	410
BmuI	ACTGGG	1 cut(s)	410
BoxI	GACNNNNGTC	1 cut(s)	383
BpiI	GAAGAC	1 cut(s)	747
BpuEI	CTTGAG	2 cut(s)	170, 457
BsaBI	GATNNNNATC	1 cut(s)	615
BsaWI	WCCGGW	1 cut(s)	797
Bsc4I	CCNNNNNNNGG	1 cut(s)	823
Bse1I	ACTGG	1 cut(s)	405
Bse3DI	GCAATG	1 cut(s)	729
Bse8I	GATNNNNATC	1 cut(s)	615
BseJI	GATNNNNATC	1 cut(s)	615
BseLI	CCNNNNNNNGG	1 cut(s)	823
BseMI	GCAATG	1 cut(s)	729
BseMII	CTCAG	2 cut(s)	192, 364
BseNI	ACTGG	1 cut(s)	405
BseXI	GCAGC	1 cut(s)	260
BseYI	CCCAGC	1 cut(s)	61
Bsh1285I	CGRYCG	1 cut(s)	798
BshFI	GGCC	2 cut(s)	130, 645
BsiEI	CGRYCG	1 cut(s)	798
BsiSI	CCGG	1 cut(s)	798
BslFI	GGGAC	1 cut(s)	694
BslI	CCNNNNNNNGG	1 cut(s)	823
BsmFI	GGGAC	1 cut(s)	694
BsnI	GGCC	2 cut(s)	130, 645
Bsp1407I	TGTACA	2 cut(s)	540, 833
Bsp143I	GATC	5 cut(s)	153, 256, 373, 591, 647
BspACI	CCGC	2 cut(s)	306, 824
BspANI	GGCC	2 cut(s)	130, 645
BspCNI	CTCAG	2 cut(s)	193, 363
BspHI	TCATGA	1 cut(s)	27
BspMAI	CTGCAG	1 cut(s)	491
BspMI	ACCTGC	1 cut(s)	494
BspTI	CTTAAG	1 cut(s)	707
BsrDI	GCAATG	1 cut(s)	729
BsrGI	TGTACA	2 cut(s)	540, 833
BsrI	ACTGG	1 cut(s)	405
BssMI	GATC	5 cut(s)	153, 256, 373, 591, 647
BstAFI	CTTAAG	1 cut(s)	707
BstAUI	TGTACA	2 cut(s)	540, 833
BstC8I	GCNNGC	1 cut(s)	659
BstDEI	CTNAG	3 cut(s)	157, 201, 350
BstKTI	GATC	5 cut(s)	156, 259, 376, 594, 650
BstMBI	GATC	5 cut(s)	153, 256, 373, 591, 647
BstMCI	CGRYCG	1 cut(s)	798
BstMWI	GCNNNNNNNGC	1 cut(s)	667
BstNSI	RCATGY	1 cut(s)	509
BstPAI	GACNNNNGTC	1 cut(s)	383
BstSFI	CTRYAG	2 cut(s)	124, 487
BstV1I	GCAGC	1 cut(s)	260
BstV2I	GAAGAC	1 cut(s)	747
BstX2I	RGATCY	1 cut(s)	153
BstYI	RGATCY	1 cut(s)	153
BsuRI	GGCC	2 cut(s)	130, 645
BtsIMutI	CAGTG	1 cut(s)	398
BveI	ACCTGC	1 cut(s)	494
Cac8I	GCNNGC	1 cut(s)	659
CciI	TCATGA	1 cut(s)	27
Cfr13I	GGNCC	1 cut(s)	800
CseI	GACGC	1 cut(s)	691
Csp6I	GTAC	5 cut(s)	193, 541, 628, 834, 841
CviAII	CATG	6 cut(s)	28, 170, 230, 243, 506, 559
CviJI	RGCY	9 cut(s)	116, 130, 200, 251, 437, 582, 645, 670, 786
CviKI_1	RGCY	9 cut(s)	116, 130, 200, 251, 437, 582, 645, 670, 786
CviQI	GTAC	5 cut(s)	193, 541, 628, 834, 841
DdeI	CTNAG	3 cut(s)	157, 201, 350
DpnI	GATC	5 cut(s)	155, 258, 375, 593, 649
DpnII	GATC	5 cut(s)	153, 256, 373, 591, 647
EaeI	YGGCCR	1 cut(s)	643
Eco147I	AGGCCT	1 cut(s)	130
Eco47I	GGWCC	1 cut(s)	800
Eco57I	CTGAAG	1 cut(s)	423
FaeI	CATG	6 cut(s)	31, 173, 233, 246, 509, 562
FaqI	GGGAC	1 cut(s)	694
FatI	CATG	6 cut(s)	27, 169, 229, 242, 505, 558
FbaI	TGATCA	1 cut(s)	591
FblI	GTMKAC	1 cut(s)	387
Fnu4HI	GCNGC	2 cut(s)	249, 825
Fsp4HI	GCNGC	2 cut(s)	249, 825
GluI	GCNGC	2 cut(s)	249, 825
GsaI	CCCAGC	1 cut(s)	65
HaeIII	GGCC	2 cut(s)	130, 645
HapII	CCGG	1 cut(s)	798
HgaI	GACGC	1 cut(s)	691
Hin1II	CATG	6 cut(s)	31, 173, 233, 246, 509, 562
HinfI	GANTC	3 cut(s)	359, 413, 611
HpaII	CCGG	1 cut(s)	798
HphI	GGTGA	2 cut(s)	100, 293
Hpy166II	GTNNAC	4 cut(s)	91, 388, 628, 834
Hpy188I	TCNGA	5 cut(s)	145, 373, 378, 422, 569
Hpy188III	TCNNGA	2 cut(s)	28, 452
Hpy8I	GTNNAC	4 cut(s)	91, 388, 628, 834
Hpy99I	CGWCG	1 cut(s)	111
HpyAV	CCTTC	4 cut(s)	10, 150, 564, 742
HpyCH4V	TGCA	6 cut(s)	323, 489, 505, 530, 577, 722
HpyF10VI	GCNNNNNNNGC	1 cut(s)	667
HpyF3I	CTNAG	3 cut(s)	157, 201, 350
Hsp92II	CATG	6 cut(s)	31, 173, 233, 246, 509, 562
Ksp22I	TGATCA	1 cut(s)	591
Kzo9I	GATC	5 cut(s)	153, 256, 373, 591, 647
LmnI	GCTCC	1 cut(s)	667
Lsp1109I	GCAGC	1 cut(s)	260
MaeIII	GTNAC	2 cut(s)	301, 673
MalI	GATC	5 cut(s)	155, 258, 375, 593, 649
MboI	GATC	5 cut(s)	153, 256, 373, 591, 647
MboII	GAAGA	2 cut(s)	745, 752
MflI	RGATCY	1 cut(s)	153
MluCI	AATT	6 cut(s)	35, 312, 367, 495, 523, 688
MlyI	GAGTC	1 cut(s)	353
MmeI	TCCRAC	1 cut(s)	506
MnlI	CCTC	4 cut(s)	190, 448, 481, 690
MseI	TTAA	1 cut(s)	708
MslI	CAYNNNNRTG	1 cut(s)	559
MspA1I	CMGCKG	1 cut(s)	251
MspCI	CTTAAG	1 cut(s)	707
MspI	CCGG	1 cut(s)	798
MwoI	GCNNNNNNNGC	1 cut(s)	667
NdeII	GATC	5 cut(s)	153, 256, 373, 591, 647
NlaIII	CATG	6 cut(s)	31, 173, 233, 246, 509, 562
NspI	RCATGY	1 cut(s)	509
PagI	TCATGA	1 cut(s)	27
PceI	AGGCCT	1 cut(s)	130
PfeI	GAWTC	2 cut(s)	413, 611
PkrI	GCNGC	2 cut(s)	250, 826
PleI	GAGTC	1 cut(s)	353
PpsI	GAGTC	1 cut(s)	353
PshAI	GACNNNNGTC	1 cut(s)	383
PspFI	CCCAGC	1 cut(s)	61
PspPI	GGNCC	1 cut(s)	800
PstI	CTGCAG	1 cut(s)	491
PsuI	RGATCY	1 cut(s)	153
PvuII	CAGCTG	1 cut(s)	251
RsaI	GTAC	5 cut(s)	194, 542, 629, 835, 842
RsaNI	GTAC	5 cut(s)	193, 541, 628, 834, 841
RseI	CAYNNNNRTG	1 cut(s)	559
SaqAI	TTAA	1 cut(s)	708
SatI	GCNGC	2 cut(s)	249, 825
Sau3AI	GATC	5 cut(s)	153, 256, 373, 591, 647
Sau96I	GGNCC	1 cut(s)	800
SchI	GAGTC	1 cut(s)	353
SfcI	CTRYAG	2 cut(s)	124, 487
SinI	GGWCC	1 cut(s)	800
SmiMI	CAYNNNNRTG	1 cut(s)	559
SmlI	CTYRAG	3 cut(s)	149, 472, 707
SmoI	CTYRAG	3 cut(s)	149, 472, 707
Sse9I	AATT	6 cut(s)	35, 312, 367, 495, 523, 688
SseBI	AGGCCT	1 cut(s)	130
SsiI	CCGC	2 cut(s)	306, 824
StuI	AGGCCT	1 cut(s)	130
TaqI	TCGA	3 cut(s)	259, 357, 794
TasI	AATT	6 cut(s)	35, 312, 367, 495, 523, 688
TatI	WGTACW	3 cut(s)	540, 627, 833
TauI	GCSGC	1 cut(s)	827
TfiI	GAWTC	2 cut(s)	413, 611
Tru1I	TTAA	1 cut(s)	708
Tru9I	TTAA	1 cut(s)	708
TscAI	CASTG	1 cut(s)	405
TseI	GCWGC	1 cut(s)	248
TspDTI	ATGAA	5 cut(s)	16, 300, 547, 603, 753
TspGWI	ACGGA	1 cut(s)	745
TspRI	CASTG	1 cut(s)	405
Vha464I	CTTAAG	1 cut(s)	707
VpaK11BI	GGWCC	1 cut(s)	800
XapI	RAATTY	2 cut(s)	367, 688
XceI	RCATGY	1 cut(s)	509
XmiI	GTMKAC	1 cut(s)	387

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.