Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0009154

Physical Location & Seq

Genomic Coordinates Forward (+)

36481233 .. 36485077

Gene Structure 3845 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1309700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 852 bp

ATGTGGCATAAATGGAAGGAGAAGTTGCGCAGATTCTCCAAGTATATCAAGTCTTTGCTGGGGATTGACAACACAATCCCAATGGTGAACCCAAAACTTCCCTGGCGTCCAGCCATATCCTATAGGCCTATACAACCATCTGACCTTGAGATCTTAGAGAAAATCCATGCTGATTTGTTTCCCATTAGGTATGAGGCTGAGTTTTTCCAAAATGTCGTCAATGGACATGATATTGTGTCATGGGCAGCTGTTGATCGAAGTCGTCCAAATGGTCAAAGTGATGAACTTATTGGATTTGTAACTGCACGAGTTGTTCCTGCAAGAGAAAGTGAGATTGGGGATTTGCTCAGTTTTGACTCGTCAAATTCAGATCAGACGTTGGTCTACATTTTGACACTGGGAGTGGTAGAATCTTTCAGAAATCTTGGCATAGCATCAGCACTTATTCGTGAGGTCATAAAATATGCCTCAAGTATTCCAACCTGCCGAGCAATTTACTTGCACGTCATTTCTTACAATAATTCTGCAATCCATTTGTACCAAAAAATGTCATTCATGTGTGTAAGAAGGTTGGAAGGCTTTTACTTGATCAATGGTCAGCATTATGATTCATATCTGTTTGTGTACTATGTAAATGGTGGCCGATCTCCTTGCTCCCCATTGGAGCTGGTTACAGGAACGCTGAATTGTATGAGGAATGGTCTTAAGTCTCTGCTTGCAATGCTACGGAAGAACGAAGACAGGAAGGTGTCAAAGTGGGCGAAATGTAAAGAAACCCATAGCCATATATCAACTGCACAAAACAGGAGAAACCTGACTGCAGCAGAGTGTACAGGGTATGAGTATGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003674 GO:0003824 GO:0004402 GO:0004596 GO:0006323 GO:0006325 GO:0006333 GO:0006334 GO:0006464 GO:0006473 GO:0006474 GO:0006475 GO:0006807 GO:0006996 GO:0007049 GO:0007059 GO:0008080 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016043 GO:0016407 GO:0016410 GO:0016569 GO:0016570 GO:0016573 GO:0016740 GO:0016746 GO:0016747 GO:0017196 GO:0018193 GO:0018205 GO:0018206 GO:0018393 GO:0018394 GO:0019538 GO:0022414 GO:0022607 GO:0031365 GO:0031497 GO:0034212 GO:0034622 GO:0034728 GO:0036211 GO:0043170 GO:0043412 GO:0043543 GO:0043933 GO:0043966 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0051276 GO:0051321 GO:0051604 GO:0061733 GO:0065003 GO:0065004 GO:0071103 GO:0071704 GO:0071824 GO:0071840 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acetyltransf_1

Protein Analysis

284

Amino Acids

32.45

Weight (kDa)

9.13

Isoelectric Point (pI)

44.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Acetyltransf_1	PF00583	63 - 185	2.6e-14	Acetyltransferase (GNAT) family
Acetyltransf_7	PF13508	95 - 185	1.2e-06	Acetyltransferase (GNAT) domain
Acetyltransf_4	PF13420	135 - 205	5.8e-07	Acetyltransferase (GNAT) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0009154)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02980 AT3G02980 AT5G16800 AT5G16800 AT5G16800
fragaria_vesca	FvH4_7g34080 FvH4_7g34080
malus_domestica	MD01G1237100.v1.1 MD07G1309700.v1.1
prunus_persica	Prupe.2G327400_v2.0.a1
pyrus_communis	pycom01g24490
rosa_chinensis	RchiOBHm_Chr1g0384361
rosa_laevigata	RLG00000026045
rosa_multiflora	Rmu_sc0016737.1_g000007
rosa_roxburghii	Rroxscaffold_4G00276740
rosa_rugosa	Rorug01G0447000 Rorug01G0447000 Rorug01G0447100 Rorug01G0447200 Rorug01G0447200
rosa_samantha	Rh1CG443200
rosa_wichuraiana	Rw1G040010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	29
Acc36I	ACCTGC	1 cut(s)	491
AccI	GTMKAC	1 cut(s)	384
AcoI	YGGCCR	1 cut(s)	640
AcsI	RAATTY	1 cut(s)	364
AcyI	GRCGYC	1 cut(s)	106
AfaI	GTAC	3 cut(s)	539, 626, 832
AflII	CTTAAG	1 cut(s)	704
AjiI	CACGTC	1 cut(s)	505
AjnI	CCWGG	1 cut(s)	101
AjuI	GAANNNNNNNTTGG	2 cut(s)	318, 350
AluBI	AGCT	2 cut(s)	248, 667
AluI	AGCT	2 cut(s)	248, 667
Alw26I	GTCTC	1 cut(s)	714
AoxI	GGCC	2 cut(s)	125, 640
ApeKI	GCWGC	2 cut(s)	245, 821
ApoI	RAATTY	1 cut(s)	364
AspLEI	GCGC	1 cut(s)	30
AsuHPI	GGTGA	1 cut(s)	97
BauI	CACGAG	1 cut(s)	306
BbsI	GAAGAC	1 cut(s)	744
BbvI	GCAGC	2 cut(s)	257, 833
BccI	CCATC	1 cut(s)	145
BcgI	CGANNNNNNTGC	2 cut(s)	633, 667
BciT130I	CCWGG	1 cut(s)	103
BclI	TGATCA	1 cut(s)	588
BcoDI	GTCTC	1 cut(s)	714
BfmI	CTRYAG	2 cut(s)	121, 819
BfrI	CTTAAG	1 cut(s)	704
BfuAI	ACCTGC	1 cut(s)	491
BglII	AGATCT	1 cut(s)	150
BisI	GCNGC	2 cut(s)	246, 822
BlsI	GCNGC	2 cut(s)	247, 823
Bme1390I	CCNGG	1 cut(s)	103
BmgBI	CACGTC	1 cut(s)	505
BmrFI	CCNGG	1 cut(s)	103
BmrI	ACTGGG	1 cut(s)	407
BmsI	GCATC	1 cut(s)	443
BmuI	ACTGGG	1 cut(s)	407
BoxI	GACNNNNGTC	1 cut(s)	380
BpiI	GAAGAC	1 cut(s)	744
BpuEI	CTTGAG	2 cut(s)	167, 454
BsaBI	GATNNNNATC	1 cut(s)	612
BsaHI	GRCGYC	1 cut(s)	106
BsaJI	CCNNGG	1 cut(s)	101
Bse1I	ACTGG	1 cut(s)	402
Bse3DI	GCAATG	1 cut(s)	726
Bse8I	GATNNNNATC	1 cut(s)	612
BseBI	CCWGG	1 cut(s)	103
BseDI	CCNNGG	1 cut(s)	101
BseJI	GATNNNNATC	1 cut(s)	612
BseMI	GCAATG	1 cut(s)	726
BseMII	CTCAG	2 cut(s)	189, 361
BseNI	ACTGG	1 cut(s)	402
BseXI	GCAGC	2 cut(s)	257, 833
BseYI	CCCAGC	1 cut(s)	58
BsgI	GTGCAG	2 cut(s)	288, 780
BshFI	GGCC	2 cut(s)	127, 642
BsmAI	GTCTC	1 cut(s)	714
BsnI	GGCC	2 cut(s)	127, 642
Bsp1407I	TGTACA	1 cut(s)	830
Bsp143I	GATC	5 cut(s)	150, 253, 370, 588, 644
BspANI	GGCC	2 cut(s)	127, 642
BspCNI	CTCAG	2 cut(s)	190, 360
BspMAI	CTGCAG	1 cut(s)	823
BspMI	ACCTGC	1 cut(s)	491
BspTI	CTTAAG	1 cut(s)	704
BsrDI	GCAATG	1 cut(s)	726
BsrGI	TGTACA	1 cut(s)	830
BsrI	ACTGG	1 cut(s)	402
BssECI	CCNNGG	1 cut(s)	101
BssMI	GATC	5 cut(s)	150, 253, 370, 588, 644
BssNI	GRCGYC	1 cut(s)	106
BssSI	CACGAG	1 cut(s)	306
Bst2BI	CACGAG	1 cut(s)	306
Bst2UI	CCWGG	1 cut(s)	103
BstACI	GRCGYC	1 cut(s)	106
BstAFI	CTTAAG	1 cut(s)	704
BstAUI	TGTACA	1 cut(s)	830
BstC8I	GCNNGC	1 cut(s)	717
BstDEI	CTNAG	3 cut(s)	154, 198, 347
BstHHI	GCGC	1 cut(s)	30
BstKTI	GATC	5 cut(s)	153, 256, 373, 591, 647
BstMAI	GTCTC	1 cut(s)	714
BstMBI	GATC	5 cut(s)	150, 253, 370, 588, 644
BstMWI	GCNNNNNNNGC	1 cut(s)	721
BstNI	CCWGG	1 cut(s)	103
BstPAI	GACNNNNGTC	1 cut(s)	380
BstSCI	CCNGG	1 cut(s)	101
BstSFI	CTRYAG	2 cut(s)	121, 819
BstV1I	GCAGC	2 cut(s)	257, 833
BstV2I	GAAGAC	1 cut(s)	744
BstX2I	RGATCY	1 cut(s)	150
BstYI	RGATCY	1 cut(s)	150
BsuRI	GGCC	2 cut(s)	127, 642
BtrI	CACGTC	1 cut(s)	505
BtsIMutI	CAGTG	1 cut(s)	395
BveI	ACCTGC	1 cut(s)	491
Cac8I	GCNNGC	1 cut(s)	717
CfoI	GCGC	1 cut(s)	30
CseI	GACGC	1 cut(s)	95
Csp6I	GTAC	3 cut(s)	538, 625, 831
CviAII	CATG	4 cut(s)	167, 227, 240, 556
CviJI	RGCY	8 cut(s)	113, 127, 197, 248, 579, 642, 667, 783
CviKI_1	RGCY	8 cut(s)	113, 127, 197, 248, 579, 642, 667, 783
CviQI	GTAC	3 cut(s)	538, 625, 831
DdeI	CTNAG	3 cut(s)	154, 198, 347
DpnI	GATC	5 cut(s)	152, 255, 372, 590, 646
DpnII	GATC	5 cut(s)	150, 253, 370, 588, 644
EaeI	YGGCCR	1 cut(s)	640
Eco147I	AGGCCT	1 cut(s)	127
EcoRII	CCWGG	1 cut(s)	101
FaeI	CATG	4 cut(s)	170, 230, 243, 559
FatI	CATG	4 cut(s)	166, 226, 239, 555
FbaI	TGATCA	1 cut(s)	588
FblI	GTMKAC	1 cut(s)	384
Fnu4HI	GCNGC	2 cut(s)	246, 822
Fsp4HI	GCNGC	2 cut(s)	246, 822
FspI	TGCGCA	1 cut(s)	29
GlaI	GCGC	1 cut(s)	29
GluI	GCNGC	2 cut(s)	246, 822
GsaI	CCCAGC	1 cut(s)	62
HaeIII	GGCC	2 cut(s)	127, 642
HgaI	GACGC	1 cut(s)	95
HhaI	GCGC	1 cut(s)	30
Hin1I	GRCGYC	1 cut(s)	106
Hin1II	CATG	4 cut(s)	170, 230, 243, 559
Hin6I	GCGC	1 cut(s)	28
HinP1I	GCGC	1 cut(s)	28
HinfI	GANTC	4 cut(s)	33, 356, 410, 608
HphI	GGTGA	1 cut(s)	97
Hpy166II	GTNNAC	4 cut(s)	88, 385, 625, 831
Hpy188I	TCNGA	4 cut(s)	142, 370, 375, 419
Hpy188III	TCNNGA	1 cut(s)	449
Hpy8I	GTNNAC	4 cut(s)	88, 385, 625, 831
HpyAV	CCTTC	4 cut(s)	10, 561, 569, 739
HpyCH4IV	ACGT	2 cut(s)	377, 504
HpyCH4V	TGCA	7 cut(s)	305, 320, 502, 527, 719, 797, 821
HpyF10VI	GCNNNNNNNGC	1 cut(s)	721
HpyF3I	CTNAG	3 cut(s)	154, 198, 347
HpySE526I	ACGT	2 cut(s)	377, 504
Hsp92I	GRCGYC	1 cut(s)	106
Hsp92II	CATG	4 cut(s)	170, 230, 243, 559
HspAI	GCGC	1 cut(s)	28
Ksp22I	TGATCA	1 cut(s)	588
Kzo9I	GATC	5 cut(s)	150, 253, 370, 588, 644
LmnI	GCTCC	2 cut(s)	659, 664
Lsp1109I	GCAGC	2 cut(s)	257, 833
LweI	GCATC	1 cut(s)	443
MaeII	ACGT	2 cut(s)	377, 504
MaeIII	GTNAC	2 cut(s)	298, 670
MalI	GATC	5 cut(s)	152, 255, 372, 590, 646
MboI	GATC	5 cut(s)	150, 253, 370, 588, 644
MboII	GAAGA	2 cut(s)	742, 749
MflI	RGATCY	1 cut(s)	150
MluCI	AATT	4 cut(s)	364, 492, 520, 685
MlyI	GAGTC	1 cut(s)	350
MmeI	TCCRAC	2 cut(s)	503, 552
MnlI	CCTC	4 cut(s)	187, 445, 478, 687
MseI	TTAA	1 cut(s)	705
MslI	CAYNNNNRTG	1 cut(s)	556
MspA1I	CMGCKG	1 cut(s)	248
MspCI	CTTAAG	1 cut(s)	704
MspR9I	CCNGG	1 cut(s)	103
MvaI	CCWGG	1 cut(s)	103
MwoI	GCNNNNNNNGC	1 cut(s)	721
NdeII	GATC	5 cut(s)	150, 253, 370, 588, 644
NlaIII	CATG	4 cut(s)	170, 230, 243, 559
NmeAIII	GCCGAG	1 cut(s)	512
NsbI	TGCGCA	1 cut(s)	29
PceI	AGGCCT	1 cut(s)	127
PfeI	GAWTC	3 cut(s)	33, 410, 608
PkrI	GCNGC	2 cut(s)	247, 823
PleI	GAGTC	1 cut(s)	350
PpsI	GAGTC	1 cut(s)	350
PshAI	GACNNNNGTC	1 cut(s)	380
Psp6I	CCWGG	1 cut(s)	101
PspFI	CCCAGC	1 cut(s)	58
PspGI	CCWGG	1 cut(s)	101
PstI	CTGCAG	1 cut(s)	823
PsuI	RGATCY	1 cut(s)	150
PvuII	CAGCTG	1 cut(s)	248
RsaI	GTAC	3 cut(s)	539, 626, 832
RsaNI	GTAC	3 cut(s)	538, 625, 831
RseI	CAYNNNNRTG	1 cut(s)	556
SaqAI	TTAA	1 cut(s)	705
SatI	GCNGC	2 cut(s)	246, 822
Sau3AI	GATC	5 cut(s)	150, 253, 370, 588, 644
SchI	GAGTC	1 cut(s)	350
ScrFI	CCNGG	1 cut(s)	103
SfaNI	GCATC	1 cut(s)	443
SfcI	CTRYAG	2 cut(s)	121, 819
SmiMI	CAYNNNNRTG	1 cut(s)	556
SmlI	CTYRAG	3 cut(s)	146, 469, 704
SmoI	CTYRAG	3 cut(s)	146, 469, 704
Sse9I	AATT	4 cut(s)	364, 492, 520, 685
SseBI	AGGCCT	1 cut(s)	127
StuI	AGGCCT	1 cut(s)	127
StyD4I	CCNGG	1 cut(s)	101
TaiI	ACGT	2 cut(s)	380, 507
TaqI	TCGA	1 cut(s)	256
TasI	AATT	4 cut(s)	364, 492, 520, 685
TatI	WGTACW	2 cut(s)	624, 830
TfiI	GAWTC	3 cut(s)	33, 410, 608
Tru1I	TTAA	1 cut(s)	705
Tru9I	TTAA	1 cut(s)	705
TscAI	CASTG	1 cut(s)	402
TseI	GCWGC	2 cut(s)	245, 821
TspDTI	ATGAA	3 cut(s)	297, 544, 600
TspGWI	ACGGA	1 cut(s)	742
TspRI	CASTG	1 cut(s)	402
Vha464I	CTTAAG	1 cut(s)	704
XapI	RAATTY	1 cut(s)	364
XcmI	CCANNNNNNNNNTGG	1 cut(s)	99
XmiI	GTMKAC	1 cut(s)	384

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.