AT3G07310

Protein of unknown function (DUF760)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0010353
Physical Location & Seq
Reverse (-)
2327818 .. 2329926
2109 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G07310.1

Sequence Viewer

Length: 1107 bp
ATGGATAGTTGTCTCTCTAATCAAACGGCGCTTCAGTTTCTCCCGTCGCGTTCCAGGAGACAGAGCGGCGATGGAGGCGGTGGTTTTGTTATTCCGGCGAAGAGGAAGATCCAGTATAGTTCGATGGTTGTGGTTGCGGCGGCGGGACAGAGTCGGTGTGAGCCTGGAAGCAGTCTAAACGCGCCGCTTGAGCCACGATCGGCGCAGGGGAGGTTTCTGAGAAGCGTGTTGCTAAACAAACGGCAGCTATTTCATTACGCCGCCGCTGATGAGCTAAAGCAACTGGCTGATGATAGGGAAGCTGCTTTAGCTCGTATGTCTCTCAGCTCTGGTTCCGATGAGGCTTCTCTCCACAGAAGGATAGCTGAACTCAAGGAACGCTACTGTAAAACTGCAGTCCAAGACATAATGTACATGTTAATCTTTTACAAATACTCCGAGATAAGAGTCCCTCTTGTTCCAAAGCTATCCAGATGCATCTATAATGGAAGACTCGAGATCTGGCCTTCAAAAGACTGGGAGTTAGAGTCAATTTACAGCTGCGATACCCTTGAGATCATCAAAGAACACGTTAGCGCAGTCATCGGATTACGGGTCAACTCATGTGTGACTGACAATTGGGCAACAACGCAGATACAGAAACTGCATCTCAGGAAAGTATATGCTGCCTCGATCTTGTACGGTTACTTCTTGAAATCAGCTTCCCTAAGGCACCAGCTTGAGTGTTCCTTATCAGATATTCATGGAAGCGGATATCTGAAAAGTCCCATCTTTGGATGCTCATTCACAACGGGCACTGCACAGATCTCCAACAAGCAGCAGCTGAGACATTACATCTCAGACTTTGATCCCGAGACATTGCAGAGATGCGCAAAACCAAGGACAGAGGAGGCAAGGAATCTGATAGAGAAGCAAAGTTTGGCTCTTTTTGGCACGGAAGAGAGTGATGAGACCATAGTGACATCGTTTTCGAGTCTGAAGCGGTTGGTTCTCGAGGCTGTGGCGTTTGGGACATTCCTGTGGGACACGGAATTGTATGTAGATGGTGCATATAAGCTGAAGGAGAATGGGAATGCAGAAGAACAAGAAGGAAAGAAAAGCATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF760

Protein Analysis

368

Amino Acids

41.37

Weight (kDa)

8.46

Isoelectric Point (pI)

58.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF760 PF05542 117 - 244 1.4e-17 Protein of unknown function (DUF760)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010353)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07310 AT3G07310 AT5G48590
fragaria_vesca FvH4_2g18230 FvH4_2g18230 FvH4_2g18230
malus_domestica MD05G1166700.v1.1 MD10G1156700.v1.1
prunus_persica Prupe.8G195000_v2.0.a1
pyrus_communis pycom05g15550 pycom10g13490
rosa_chinensis RchiOBHm_Chr6g0283601
rosa_laevigata RLG00000012813
rosa_multiflora Rmu_co8416891.1_g000001
rosa_roxburghii Rroxscaffold_7G00185360
rosa_rugosa Rorug06G0156000
rosa_samantha Rh6AG267800 Rh6BG270300 Rh6CG270100 Rh6DG263800
rosa_wichuraiana Rw6G023200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 871
AccB1I GGYRCC 1 cut(s) 711
AccBSI CCGCTC 1 cut(s) 66
AccII CGCG 2 cut(s) 49, 182
AclWI GGATC 2 cut(s) 103, 842
AcuI CTGAAG 3 cut(s) 17, 998, 1079
AfaI GTAC 2 cut(s) 413, 680
AfiI CCNNNNNNNGG 1 cut(s) 773
AflIII ACRYGT 2 cut(s) 414, 568
AgsI TTSAA 2 cut(s) 510, 694
AjnI CCWGG 2 cut(s) 53, 163
AjuI GAANNNNNNNTTGG 2 cut(s) 902, 934
Alw26I GTCTC 6 cut(s) 17, 52, 324, 820, 848, 944
AlwI GGATC 2 cut(s) 103, 842
AlwNI CAGNNNCTG 2 cut(s) 643, 823
Ama87I CYCGRG 3 cut(s) 494, 851, 992
AoxI GGCC 1 cut(s) 503
ApeKI GCWGC 6 cut(s) 244, 302, 540, 665, 817, 820
ArsI GACNNNNNNTTYG 2 cut(s) 952, 984
AspLEI GCGC 5 cut(s) 31, 184, 205, 578, 872
AvaI CYCGRG 3 cut(s) 494, 851, 992
AxyI CCTNAGG 1 cut(s) 707
BaeGI GKGCMC 1 cut(s) 797
BanI GGYRCC 1 cut(s) 711
BarI GAAGNNNNNNTAC 2 cut(s) 671, 703
BbsI GAAGAC 1 cut(s) 496
BbvI GCAGC 6 cut(s) 256, 289, 527, 652, 829, 832
BccI CCATC 4 cut(s) 65, 118, 776, 1037
BceAI ACGGC 2 cut(s) 42, 257
BciT130I CCWGG 2 cut(s) 55, 165
BcoDI GTCTC 6 cut(s) 17, 52, 324, 820, 848, 944
BfmI CTRYAG 1 cut(s) 393
BfoI RGCGCY 1 cut(s) 32
BglII AGATCT 2 cut(s) 498, 804
Bme1390I CCNGG 2 cut(s) 55, 165
BmeT110I CYCGRG 3 cut(s) 494, 851, 992
BmiI GGNNCC 2 cut(s) 334, 713
BmrFI CCNGG 2 cut(s) 55, 165
BmrI ACTGGG 1 cut(s) 526
BmsI GCATC 5 cut(s) 464, 486, 655, 767, 857
BmuI ACTGGG 1 cut(s) 526
BpiI GAAGAC 1 cut(s) 496
BpuEI CTTGAG 4 cut(s) 209, 356, 572, 740
BsaI GGTCTC 1 cut(s) 944
BsaJI CCNNGG 1 cut(s) 878
BsaXI ACNNNNNCTCC 4 cut(s) 419, 449, 512, 542
Bsc4I CCNNNNNNNGG 1 cut(s) 773
Bse1I ACTGG 3 cut(s) 112, 288, 521
Bse21I CCTNAGG 1 cut(s) 707
Bse3DI GCAATG 1 cut(s) 857
BseBI CCWGG 2 cut(s) 55, 165
BseDI CCNNGG 1 cut(s) 878
BseGI GGATG 1 cut(s) 782
BseLI CCNNNNNNNGG 1 cut(s) 773
BseMI GCAATG 1 cut(s) 857
BseMII CTCAG 5 cut(s) 209, 337, 664, 815, 852
BseNI ACTGG 3 cut(s) 112, 288, 521
BseRI GAGGAG 1 cut(s) 902
BseSI GKGCMC 1 cut(s) 797
BseXI GCAGC 6 cut(s) 256, 289, 527, 652, 829, 832
BsgI GTGCAG 1 cut(s) 783
Bsh1236I CGCG 2 cut(s) 49, 182
Bsh1285I CGRYCG 1 cut(s) 200
BshFI GGCC 1 cut(s) 505
BshNI GGYRCC 1 cut(s) 711
BsiEI CGRYCG 1 cut(s) 200
BsiHKCI CYCGRG 3 cut(s) 494, 851, 992
BsiSI CCGG 1 cut(s) 95
BslFI GGGAC 5 cut(s) 159, 434, 750, 1024, 1037
BslI CCNNNNNNNGG 1 cut(s) 773
BsmAI GTCTC 6 cut(s) 17, 52, 324, 820, 848, 944
BsmFI GGGAC 5 cut(s) 159, 434, 750, 1024, 1037
BsmI GAATGC 1 cut(s) 1078
BsnI GGCC 1 cut(s) 505
Bso31I GGTCTC 1 cut(s) 944
BsoBI CYCGRG 3 cut(s) 494, 851, 992
Bsp1286I GDGCHC 1 cut(s) 797
Bsp1407I TGTACA 1 cut(s) 411
Bsp143I GATC 7 cut(s) 108, 197, 498, 555, 672, 804, 847
BspANI GGCC 1 cut(s) 505
BspCNI CTCAG 5 cut(s) 210, 336, 663, 816, 851
BspFNI CGCG 2 cut(s) 49, 182
BspLI GGNNCC 2 cut(s) 334, 713
BspMAI CTGCAG 1 cut(s) 397
BspPI GGATC 2 cut(s) 103, 842
BspT107I GGYRCC 1 cut(s) 711
BspTNI GGTCTC 1 cut(s) 944
BsrBI CCGCTC 1 cut(s) 66
BsrDI GCAATG 1 cut(s) 857
BsrGI TGTACA 1 cut(s) 411
BsrI ACTGG 3 cut(s) 112, 288, 521
BssECI CCNNGG 1 cut(s) 878
BssMI GATC 7 cut(s) 108, 197, 498, 555, 672, 804, 847
BssT1I CCWWGG 1 cut(s) 878
Bst2UI CCWGG 2 cut(s) 55, 165
Bst4CI ACNGT 2 cut(s) 386, 683
Bst6I CTCTTC 2 cut(s) 95, 933
BstAUI TGTACA 1 cut(s) 411
BstDEI CTNAG 6 cut(s) 218, 323, 650, 707, 824, 838
BstF5I GGATG 1 cut(s) 782
BstFNI CGCG 2 cut(s) 49, 182
BstH2I RGCGCY 1 cut(s) 32
BstHHI GCGC 5 cut(s) 31, 184, 205, 578, 872
BstKTI GATC 7 cut(s) 111, 200, 501, 558, 675, 807, 850
BstMAI GTCTC 6 cut(s) 17, 52, 324, 820, 848, 944
BstMBI GATC 7 cut(s) 108, 197, 498, 555, 672, 804, 847
BstMCI CGRYCG 1 cut(s) 200
BstMWI GCNNNNNNNGC 3 cut(s) 75, 190, 308
BstNI CCWGG 2 cut(s) 55, 165
BstNSI RCATGY 1 cut(s) 418
BstSCI CCNGG 2 cut(s) 53, 163
BstSFI CTRYAG 1 cut(s) 393
BstSLI GKGCMC 1 cut(s) 797
BstUI CGCG 2 cut(s) 49, 182
BstV1I GCAGC 6 cut(s) 256, 289, 527, 652, 829, 832
BstV2I GAAGAC 1 cut(s) 496
BstX2I RGATCY 3 cut(s) 108, 498, 804
BstYI RGATCY 3 cut(s) 108, 498, 804
Bsu36I CCTNAGG 1 cut(s) 707
BsuRI GGCC 1 cut(s) 505
BtgZI GCGATG 1 cut(s) 84
BtsCI GGATG 1 cut(s) 782
BtsI GCAGTG 1 cut(s) 795
BtsIMutI CAGTG 1 cut(s) 795
CaiI CAGNNNCTG 2 cut(s) 643, 823
CfoI GCGC 5 cut(s) 31, 184, 205, 578, 872
Csp6I GTAC 2 cut(s) 412, 679
CviAII CATG 3 cut(s) 415, 603, 743
CviQI GTAC 2 cut(s) 412, 679
DdeI CTNAG 6 cut(s) 218, 323, 650, 707, 824, 838
DpnI GATC 7 cut(s) 110, 199, 500, 557, 674, 806, 849
DpnII GATC 7 cut(s) 108, 197, 498, 555, 672, 804, 847
Eam1104I CTCTTC 2 cut(s) 95, 933
EarI CTCTTC 2 cut(s) 95, 933
Eco130I CCWWGG 1 cut(s) 878
Eco31I GGTCTC 1 cut(s) 944
Eco32I GATATC 1 cut(s) 755
Eco57I CTGAAG 3 cut(s) 17, 998, 1079
Eco81I CCTNAGG 1 cut(s) 707
Eco88I CYCGRG 3 cut(s) 494, 851, 992
EcoRII CCWGG 2 cut(s) 53, 163
EcoRV GATATC 1 cut(s) 755
EcoT14I CCWWGG 1 cut(s) 878
EcoT22I ATGCAT 1 cut(s) 479
ErhI CCWWGG 1 cut(s) 878
FaeI CATG 3 cut(s) 418, 606, 746
FaqI GGGAC 5 cut(s) 159, 434, 750, 1024, 1037
FatI CATG 3 cut(s) 414, 602, 742
FauI CCCGC 1 cut(s) 136
FauNDI CATATG 1 cut(s) 1103
FokI GGATG 1 cut(s) 789
FspI TGCGCA 1 cut(s) 871
GlaI GCGC 5 cut(s) 30, 183, 204, 577, 871
HaeII RGCGCY 1 cut(s) 32
HaeIII GGCC 1 cut(s) 505
HapII CCGG 1 cut(s) 95
HhaI GCGC 5 cut(s) 31, 184, 205, 578, 872
Hin1II CATG 3 cut(s) 418, 606, 746
Hin6I GCGC 5 cut(s) 29, 182, 203, 576, 870
HinP1I GCGC 5 cut(s) 29, 182, 203, 576, 870
HincII GTYRAC 1 cut(s) 598
HindII GTYRAC 1 cut(s) 598
HinfI GANTC 6 cut(s) 151, 447, 492, 527, 898, 973
HpaII CCGG 1 cut(s) 95
Hpy166II GTNNAC 1 cut(s) 598
Hpy188I TCNGA 9 cut(s) 219, 337, 439, 587, 736, 759, 841, 903, 978
Hpy188III TCNNGA 6 cut(s) 471, 496, 652, 691, 851, 992
Hpy8I GTNNAC 1 cut(s) 598
Hpy99I CGWCG 1 cut(s) 49
HpyAV CCTTC 4 cut(s) 351, 516, 1054, 1082
HpyCH4III ACNGT 2 cut(s) 386, 683
HpyCH4IV ACGT 1 cut(s) 570
HpyCH4V TGCA 7 cut(s) 395, 477, 646, 800, 862, 1049, 1076
HpyF10VI GCNNNNNNNGC 3 cut(s) 75, 190, 308
HpyF3I CTNAG 6 cut(s) 218, 323, 650, 707, 824, 838
HpySE526I ACGT 1 cut(s) 570
Hsp92II CATG 3 cut(s) 418, 606, 746
HspAI GCGC 5 cut(s) 29, 182, 203, 576, 870
Kzo9I GATC 7 cut(s) 108, 197, 498, 555, 672, 804, 847
Lsp1109I GCAGC 6 cut(s) 256, 289, 527, 652, 829, 832
LweI GCATC 5 cut(s) 464, 486, 655, 767, 857
MaeII ACGT 1 cut(s) 570
MaeIII GTNAC 3 cut(s) 607, 683, 958
MalI GATC 7 cut(s) 110, 199, 500, 557, 674, 806, 849
MbiI CCGCTC 1 cut(s) 66
MboI GATC 7 cut(s) 108, 197, 498, 555, 672, 804, 847
MboII GAAGA 5 cut(s) 112, 118, 501, 950, 1091
MfeI CAATTG 1 cut(s) 616
MflI RGATCY 3 cut(s) 108, 498, 804
MhlI GDGCHC 1 cut(s) 797
MluCI AATT 3 cut(s) 531, 616, 1031
MlyI GAGTC 5 cut(s) 160, 456, 486, 536, 982
MmeI TCCRAC 1 cut(s) 834
MnlI CCTC 9 cut(s) 68, 96, 204, 334, 462, 679, 880, 883, 988
Mph1103I ATGCAT 1 cut(s) 479
MseI TTAA 1 cut(s) 419
MslI CAYNNNNRTG 1 cut(s) 1018
MspA1I CMGCKG 3 cut(s) 266, 540, 823
MspI CCGG 1 cut(s) 95
MspR9I CCNGG 2 cut(s) 55, 165
MunI CAATTG 1 cut(s) 616
Mva1269I GAATGC 1 cut(s) 1078
MvaI CCWGG 2 cut(s) 55, 165
MvnI CGCG 2 cut(s) 49, 182
MwoI GCNNNNNNNGC 3 cut(s) 75, 190, 308
NdeI CATATG 1 cut(s) 1103
NdeII GATC 7 cut(s) 108, 197, 498, 555, 672, 804, 847
NlaIII CATG 3 cut(s) 418, 606, 746
NlaIV GGNNCC 2 cut(s) 334, 713
NmuCI GTSAC 2 cut(s) 607, 958
NsbI TGCGCA 1 cut(s) 871
NsiI ATGCAT 1 cut(s) 479
NspI RCATGY 1 cut(s) 418
PaeR7I CTCGAG 2 cut(s) 494, 992
PciI ACATGT 1 cut(s) 414
PctI GAATGC 1 cut(s) 1078
PfeI GAWTC 1 cut(s) 898
PflFI GACNNNGTC 1 cut(s) 150
PfoI TCCNGGA 1 cut(s) 53
Ple19I CGATCG 1 cut(s) 200
PleI GAGTC 5 cut(s) 159, 455, 486, 535, 981
PpsI GAGTC 5 cut(s) 159, 455, 486, 535, 981
PscI ACATGT 1 cut(s) 414
Psp6I CCWGG 2 cut(s) 53, 163
PspGI CCWGG 2 cut(s) 53, 163
PspN4I GGNNCC 2 cut(s) 334, 713
PstI CTGCAG 1 cut(s) 397
PstNI CAGNNNCTG 2 cut(s) 643, 823
PsuI RGATCY 3 cut(s) 108, 498, 804
PsyI GACNNNGTC 1 cut(s) 150
PvuI CGATCG 1 cut(s) 200
PvuII CAGCTG 2 cut(s) 540, 823
RsaI GTAC 2 cut(s) 413, 680
RsaNI GTAC 2 cut(s) 412, 679
RseI CAYNNNNRTG 1 cut(s) 1018
SaqAI TTAA 1 cut(s) 419
Sau3AI GATC 7 cut(s) 108, 197, 498, 555, 672, 804, 847
SchI GAGTC 5 cut(s) 160, 456, 486, 536, 982
ScrFI CCNGG 2 cut(s) 55, 165
SduI GDGCHC 1 cut(s) 797
SfaNI GCATC 5 cut(s) 464, 486, 655, 767, 857
SfcI CTRYAG 1 cut(s) 393
Sfr274I CTCGAG 2 cut(s) 494, 992
SlaI CTCGAG 2 cut(s) 494, 992
SmiMI CAYNNNNRTG 1 cut(s) 1018
SmlI CTYRAG 6 cut(s) 188, 371, 494, 551, 719, 992
SmoI CTYRAG 6 cut(s) 188, 371, 494, 551, 719, 992
Sse9I AATT 3 cut(s) 531, 616, 1031
StyD4I CCNGG 2 cut(s) 53, 163
StyI CCWWGG 1 cut(s) 878
TaaI ACNGT 2 cut(s) 386, 683
TaiI ACGT 1 cut(s) 573
TaqI TCGA 5 cut(s) 122, 495, 671, 971, 993
TasI AATT 3 cut(s) 531, 616, 1031
TatI WGTACW 1 cut(s) 411
TauI GCSGC 6 cut(s) 69, 140, 143, 187, 263, 266
TfiI GAWTC 1 cut(s) 898
Tru1I TTAA 1 cut(s) 419
Tru9I TTAA 1 cut(s) 419
TscAI CASTG 1 cut(s) 802
TseFI GTSAC 2 cut(s) 607, 958
TseI GCWGC 6 cut(s) 244, 302, 540, 665, 817, 820
Tsp45I GTSAC 2 cut(s) 607, 958
TspDTI ATGAA 2 cut(s) 242, 731
TspGWI ACGGA 2 cut(s) 950, 1043
TspRI CASTG 1 cut(s) 802
Tth111I GACNNNGTC 1 cut(s) 150
XceI RCATGY 1 cut(s) 418
XhoI CTCGAG 2 cut(s) 494, 992
Zsp2I ATGCAT 1 cut(s) 479
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.