AT3G10410

serine carboxypeptidase-like 49

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
3235290 .. 3238267
2978 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G10410.1

Sequence Viewer

Length: 1551 bp
ATGGAGAAACTAACTTTTCTCAGCCTTCTCCTGCATTTCGTCGTCTTCATCGCTTCAACGATACCGTCTTCATCGTTCCTCTTGAATGATCGCACCTTTGAGAGATCGAACTTGCCGTCTACGCGCGCGGAGAAGCTGATCCGTGAGCTAAACCTTTTCCCGCAGCAGGATCTGAATGTGATCGATGTCGCTGATTTGCCTCTCACTGCTGCGGAGGGACCGGGGATTGTTGAACGGAAGTTCGTATTCCCGAATATACTTGCCGATGGTGGCCCTACTGTCGACGATTTAGGTCATCATGCTGGTTATTACAAGCTCCCGAAATCTCGTGGCGCAAGCATGTTCTACTTCTTCTTCGAGTCACGGAACAAGAAGGATGCTCCTGTTGTGATTTGGTTGACGGGAGGGCCTGGATGTAGTAGTGAGTTGGCTGTGTTCTATGAGAATGGTCCTTTCAAGATCACTAGTAACATGTCTCTTGCTTGGAATGAGTATGGATGGGATCAGGTTTCCAATCTTCTGTATGTTGATCAGCCTGTTGGAACTGGTTTCAGCTACACGACAGATAAAAGTGATATCCGTCATGACGAAACTGGAGTTAGCAATGATCTTTATGATTTTCTGCAGGCTTTCTTTGCGGAGCACCCTAAGTTGGCAAAAAACGACTTTTATATTACTGGAGAGTCATATGCTGGGCACTATATCCCAGCTTTTGCTTCCCGAGTCCATAAAGGAAACAAGGCTAATGAGGGAGTTCATATTAACCTAAAGGGATTCGCTATTGGAAATGGGCTTACAGATCCTGCACTCCAATACCCAGCCTATCCTGACTACGCTTTGGAAATGGGTCTAATCACGCAAAAAGAGCATGATCGCTTAGAAAAGATTGTCCCACTGTGCGAACTATCAATCAAGCTTTGTGGAACTGATGGCACAACTTCTTGTTTGGCATCATATCTTGTCTGCAACTCTTTGTTCAGTGGTGTAATGAGTCATGCTGGTGGAGTAAACTATTACGACATCAGGAAGAAGTGCGTGGGAAGTTTGTGCTACGATTTCTCAAACATGGAGAAATTTTTGAATCTGCAATCTGTGAGGAAGTCACTTGGTGTTGGGGACATAGACTTTGTCTCCTGCAGTACTTCAGTCTATCAGGCAATGCTTGTAGATTGGATGAGGAATCTCGAGGTTGGAATTCCCACGCTCTTGGAAGATGGAATCAGCCTCCTTGTGTATGCTGGAGAATATGATCTTATCTGCAACTGGCTCGGTAACTCGAGGTGGGTGAATGCAATGGAGTGGTCAGGGAAAACAAACTTTGGGGCGGCTAAAGAAGTTCCGTTTATTGTGGATGGCAAAGAAGCAGGCTTGTTAAAGACTTATGAACAACTCAGTTTCCTCAAGGTGAGAGATGCAGGACACATGGTTCCAATGGACCAGCCTAAAGCTGCATTGAAAATGCTGAAGCGATGGATGGAGAATTCACTTATCGAAGATGCTACTGTGACTGTTGCTGCTCAGGGAGGAGAGGAACTGGTTGCTCAGATGTGA

Protein Analysis

516

Amino Acids

57.3

Weight (kDa)

5.2

Isoelectric Point (pI)

35.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 96 - 494 2e-131 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 119, 282
AccII CGCG 3 cut(s) 124, 126, 128
AciI CCGC 5 cut(s) 128, 161, 212, 638, 1325
AclWI GGATC 4 cut(s) 133, 177, 510, 794
AcsI RAATTY 3 cut(s) 1073, 1194, 1480
AcuI CTGAAG 2 cut(s) 1128, 1484
AdeI CACNNNGTG 1 cut(s) 1109
AfaI GTAC 1 cut(s) 1141
AfiI CCNNNNNNNGG 2 cut(s) 166, 652
AflIII ACRYGT 1 cut(s) 471
AgsI TTSAA 6 cut(s) 57, 85, 233, 457, 1081, 1456
AhlI ACTAGT 1 cut(s) 464
AjnI CCWGG 1 cut(s) 409
AloI GAACNNNNNNTCC 2 cut(s) 1410, 1442
AluBI AGCT 7 cut(s) 136, 148, 316, 555, 710, 916, 1448
AluI AGCT 7 cut(s) 136, 148, 316, 555, 710, 916, 1448
Alw21I GWGCWC 1 cut(s) 645
Alw26I GTCTC 2 cut(s) 480, 1135
AlwI GGATC 4 cut(s) 133, 177, 510, 794
AlwNI CAGNNNCTG 2 cut(s) 172, 803
Ama87I CYCGRG 3 cut(s) 720, 1184, 1276
AoxI GGCC 2 cut(s) 271, 407
ApeKI GCWGC 4 cut(s) 163, 209, 1448, 1514
ApoI RAATTY 3 cut(s) 1073, 1194, 1480
ArsI GACNNNNNNTTYG 4 cut(s) 101, 133, 1109, 1141
AspLEI GCGC 3 cut(s) 126, 128, 335
AspS9I GGNCC 5 cut(s) 218, 272, 407, 449, 1435
AsuC2I CCSGG 1 cut(s) 222
AsuHPI GGTGA 2 cut(s) 1297, 1417
AvaI CYCGRG 3 cut(s) 720, 1184, 1276
AvaII GGWCC 3 cut(s) 218, 449, 1435
BaeGI GKGCMC 1 cut(s) 699
BauI CACGAG 1 cut(s) 327
BbsI GAAGAC 2 cut(s) 37, 60
Bbv12I GWGCWC 1 cut(s) 645
BbvI GCAGC 4 cut(s) 175, 196, 1435, 1501
BccI CCATC 7 cut(s) 260, 492, 923, 1208, 1346, 1464, 1468
BceAI ACGGC 1 cut(s) 100
BcgI CGANNNNNNTGC 2 cut(s) 1249, 1283
BciT130I CCWGG 1 cut(s) 411
BclI TGATCA 1 cut(s) 529
BcnI CCSGG 1 cut(s) 222
BcoDI GTCTC 2 cut(s) 480, 1135
BcuI ACTAGT 1 cut(s) 464
BfaI CTAG 1 cut(s) 465
BfmI CTRYAG 2 cut(s) 623, 1135
BisI GCNGC 5 cut(s) 164, 210, 1326, 1449, 1515
BlsI GCNGC 5 cut(s) 165, 211, 1327, 1450, 1516
BmcAI AGTACT 1 cut(s) 1141
Bme1390I CCNGG 2 cut(s) 222, 411
Bme18I GGWCC 3 cut(s) 218, 449, 1435
BmeT110I CYCGRG 3 cut(s) 720, 1184, 1276
BmgT120I GGNCC 5 cut(s) 218, 272, 407, 449, 1435
BmiI GGNNCC 2 cut(s) 219, 1428
BmrFI CCNGG 2 cut(s) 222, 411
BmsI GCATC 4 cut(s) 367, 959, 1402, 1486
BpiI GAAGAC 2 cut(s) 37, 60
BpmI CTGGAG 3 cut(s) 615, 699, 1260
Bpu10I CCTNAGC 1 cut(s) 1518
BpuEI CTTGAG 1 cut(s) 1385
BpuMI CCSGG 1 cut(s) 222
Bsa29I ATCGAT 1 cut(s) 183
BsaJI CCNNGG 1 cut(s) 221
BsaXI ACNNNNNCTCC 2 cut(s) 1115, 1145
Bsc4I CCNNNNNNNGG 2 cut(s) 166, 652
Bse1I ACTGG 5 cut(s) 550, 598, 682, 1268, 1539
Bse3DI GCAATG 3 cut(s) 610, 1164, 1299
BseBI CCWGG 1 cut(s) 411
BseCI ATCGAT 1 cut(s) 183
BseDI CCNNGG 1 cut(s) 221
BseGI GGATG 6 cut(s) 382, 419, 503, 1179, 1357, 1479
BseLI CCNNNNNNNGG 2 cut(s) 166, 652
BseMI GCAATG 3 cut(s) 610, 1164, 1299
BseMII CTCAG 3 cut(s) 34, 1405, 1532
BseNI ACTGG 5 cut(s) 550, 598, 682, 1268, 1539
BsePI GCGCGC 1 cut(s) 124
BseRI GAGGAG 1 cut(s) 1539
BseSI GKGCMC 1 cut(s) 699
BseXI GCAGC 4 cut(s) 175, 196, 1435, 1501
BseYI CCCAGC 3 cut(s) 692, 706, 817
BsgI GTGCAG 1 cut(s) 789
Bsh1236I CGCG 3 cut(s) 124, 126, 128
BshFI GGCC 2 cut(s) 273, 409
BshVI ATCGAT 1 cut(s) 183
BsiHKAI GWGCWC 1 cut(s) 645
BsiHKCI CYCGRG 3 cut(s) 720, 1184, 1276
BsiSI CCGG 1 cut(s) 221
BslFI GGGAC 3 cut(s) 231, 875, 1130
BslI CCNNNNNNNGG 2 cut(s) 166, 652
BsmAI GTCTC 2 cut(s) 480, 1135
BsmFI GGGAC 3 cut(s) 231, 875, 1130
BsmI GAATGC 1 cut(s) 1294
BsnI GGCC 2 cut(s) 273, 409
BsoBI CYCGRG 3 cut(s) 720, 1184, 1276
Bsp1286I GDGCHC 2 cut(s) 645, 699
BspACI CCGC 5 cut(s) 128, 161, 212, 638, 1325
BspANI GGCC 2 cut(s) 273, 409
BspCNI CTCAG 3 cut(s) 33, 1404, 1531
BspDI ATCGAT 1 cut(s) 183
BspFNI CGCG 3 cut(s) 124, 126, 128
BspHI TCATGA 1 cut(s) 583
BspLI GGNNCC 2 cut(s) 219, 1428
BspMAI CTGCAG 2 cut(s) 627, 1139
BspPI GGATC 4 cut(s) 133, 177, 510, 794
BsrDI GCAATG 3 cut(s) 610, 1164, 1299
BsrI ACTGG 5 cut(s) 550, 598, 682, 1268, 1539
BssECI CCNNGG 1 cut(s) 221
BssHII GCGCGC 1 cut(s) 124
BssSI CACGAG 1 cut(s) 327
Bst2BI CACGAG 1 cut(s) 327
Bst2UI CCWGG 1 cut(s) 411
Bst4CI ACNGT 5 cut(s) 66, 280, 897, 1504, 1510
BstC8I GCNNGC 4 cut(s) 126, 337, 627, 1366
BstDEI CTNAG 6 cut(s) 20, 648, 877, 1391, 1518, 1542
BstF5I GGATG 6 cut(s) 382, 419, 503, 1179, 1357, 1479
BstFNI CGCG 3 cut(s) 124, 126, 128
BstHHI GCGC 3 cut(s) 126, 128, 335
BstMAI GTCTC 2 cut(s) 480, 1135
BstMWI GCNNNNNNNGC 3 cut(s) 121, 635, 865
BstNI CCWGG 1 cut(s) 411
BstNSI RCATGY 2 cut(s) 343, 475
BstSCI CCNGG 2 cut(s) 220, 409
BstSFI CTRYAG 2 cut(s) 623, 1135
BstSLI GKGCMC 1 cut(s) 699
BstUI CGCG 3 cut(s) 124, 126, 128
BstV1I GCAGC 4 cut(s) 175, 196, 1435, 1501
BstV2I GAAGAC 2 cut(s) 37, 60
BstX2I RGATCY 2 cut(s) 169, 799
BstXI CCANNNNNNTGG 1 cut(s) 1207
BstYI RGATCY 2 cut(s) 169, 799
Bsu15I ATCGAT 1 cut(s) 183
BsuRI GGCC 2 cut(s) 273, 409
BsuTUI ATCGAT 1 cut(s) 183
BtgZI GCGATG 2 cut(s) 34, 1483
BtsCI GGATG 6 cut(s) 382, 419, 503, 1179, 1357, 1479
BtsI GCAGTG 1 cut(s) 204
BtsIMutI CAGTG 3 cut(s) 204, 893, 985
Cac8I GCNNGC 4 cut(s) 126, 337, 627, 1366
CaiI CAGNNNCTG 2 cut(s) 172, 803
CciI TCATGA 1 cut(s) 583
CfoI GCGC 3 cut(s) 126, 128, 335
Cfr13I GGNCC 5 cut(s) 218, 272, 407, 449, 1435
ClaI ATCGAT 1 cut(s) 183
Csp6I GTAC 1 cut(s) 1140
CspCI CAANNNNNGTGG 2 cut(s) 901, 936
CviAII CATG 8 cut(s) 299, 340, 472, 584, 869, 995, 1066, 1423
CviQI GTAC 1 cut(s) 1140
DdeI CTNAG 6 cut(s) 20, 648, 877, 1391, 1518, 1542
DraIII CACNNNGTG 1 cut(s) 1109
Eco32I GATATC 1 cut(s) 577
Eco47I GGWCC 3 cut(s) 218, 449, 1435
Eco57I CTGAAG 2 cut(s) 1128, 1484
Eco88I CYCGRG 3 cut(s) 720, 1184, 1276
EcoO109I RGGNCCY 1 cut(s) 407
EcoRI GAATTC 2 cut(s) 1194, 1480
EcoRII CCWGG 1 cut(s) 409
EcoRV GATATC 1 cut(s) 577
FaeI CATG 8 cut(s) 302, 343, 475, 587, 872, 998, 1069, 1426
FaqI GGGAC 3 cut(s) 231, 875, 1130
FatI CATG 8 cut(s) 298, 339, 471, 583, 868, 994, 1065, 1422
FauI CCCGC 1 cut(s) 168
FauNDI CATATG 1 cut(s) 688
FbaI TGATCA 1 cut(s) 529
FblI GTMKAC 2 cut(s) 119, 282
Fnu4HI GCNGC 5 cut(s) 164, 210, 1326, 1449, 1515
FokI GGATG 6 cut(s) 389, 426, 510, 1186, 1364, 1486
Fsp4HI GCNGC 5 cut(s) 164, 210, 1326, 1449, 1515
FspBI CTAG 1 cut(s) 465
GlaI GCGC 3 cut(s) 125, 127, 334
GluI GCNGC 5 cut(s) 164, 210, 1326, 1449, 1515
GsaI CCCAGC 3 cut(s) 696, 710, 821
GsuI CTGGAG 3 cut(s) 615, 699, 1260
HaeIII GGCC 2 cut(s) 273, 409
HapII CCGG 1 cut(s) 221
HhaI GCGC 3 cut(s) 126, 128, 335
Hin1II CATG 8 cut(s) 302, 343, 475, 587, 872, 998, 1069, 1426
Hin6I GCGC 3 cut(s) 124, 126, 333
HinP1I GCGC 3 cut(s) 124, 126, 333
HincII GTYRAC 2 cut(s) 283, 399
HindII GTYRAC 2 cut(s) 283, 399
HindIII AAGCTT 1 cut(s) 914
HinfI GANTC 8 cut(s) 359, 683, 723, 774, 991, 1081, 1180, 1218
HpaII CCGG 1 cut(s) 221
HphI GGTGA 2 cut(s) 1297, 1417
Hpy166II GTNNAC 4 cut(s) 120, 283, 399, 1009
Hpy188I TCNGA 2 cut(s) 174, 1545
Hpy188III TCNNGA 9 cut(s) 82, 250, 319, 457, 584, 720, 827, 1024, 1184
Hpy8I GTNNAC 4 cut(s) 120, 283, 399, 1009
Hpy99I CGWCG 2 cut(s) 44, 287
HpyAV CCTTC 2 cut(s) 35, 367
HpyCH4III ACNGT 5 cut(s) 66, 280, 897, 1504, 1510
HpyF10VI GCNNNNNNNGC 3 cut(s) 121, 635, 865
HpyF3I CTNAG 6 cut(s) 20, 648, 877, 1391, 1518, 1542
Hsp92II CATG 8 cut(s) 302, 343, 475, 587, 872, 998, 1069, 1426
HspAI GCGC 3 cut(s) 124, 126, 333
Ksp22I TGATCA 1 cut(s) 529
LmnI GCTCC 3 cut(s) 321, 385, 640
Lsp1109I GCAGC 4 cut(s) 175, 196, 1435, 1501
LweI GCATC 4 cut(s) 367, 959, 1402, 1486
MaeI CTAG 1 cut(s) 465
MaeIII GTNAC 5 cut(s) 360, 467, 1101, 1271, 1504
MauBI CGCGCGCG 1 cut(s) 124
MboII GAAGA 8 cut(s) 37, 60, 343, 346, 509, 1039, 1223, 1505
MflI RGATCY 2 cut(s) 169, 799
MhlI GDGCHC 2 cut(s) 645, 699
MluCI AATT 3 cut(s) 1073, 1194, 1480
MlyI GAGTC 4 cut(s) 368, 692, 732, 1000
MmeI TCCRAC 2 cut(s) 520, 1171
MseI TTAA 2 cut(s) 762, 1373
MslI CAYNNNNRTG 1 cut(s) 999
MspI CCGG 1 cut(s) 221
MspR9I CCNGG 2 cut(s) 222, 411
Mva1269I GAATGC 1 cut(s) 1294
MvaI CCWGG 1 cut(s) 411
MvnI CGCG 3 cut(s) 124, 126, 128
MwoI GCNNNNNNNGC 3 cut(s) 121, 635, 865
NciI CCSGG 1 cut(s) 222
NdeI CATATG 1 cut(s) 688
NlaIII CATG 8 cut(s) 302, 343, 475, 587, 872, 998, 1069, 1426
NlaIV GGNNCC 2 cut(s) 219, 1428
NmuCI GTSAC 3 cut(s) 360, 1101, 1504
NspI RCATGY 2 cut(s) 343, 475
PaeR7I CTCGAG 2 cut(s) 1184, 1276
PagI TCATGA 1 cut(s) 583
PauI GCGCGC 1 cut(s) 124
PciI ACATGT 1 cut(s) 471
PcsI WCGNNNNNNNCGW 1 cut(s) 113
PctI GAATGC 1 cut(s) 1294
PfeI GAWTC 4 cut(s) 774, 1081, 1180, 1218
PflFI GACNNNGTC 1 cut(s) 1127
PkrI GCNGC 5 cut(s) 165, 211, 1327, 1450, 1516
PleI GAGTC 4 cut(s) 367, 691, 731, 999
PpsI GAGTC 4 cut(s) 367, 691, 731, 999
PscI ACATGT 1 cut(s) 471
Psp6I CCWGG 1 cut(s) 409
PspFI CCCAGC 3 cut(s) 692, 706, 817
PspGI CCWGG 1 cut(s) 409
PspN4I GGNNCC 2 cut(s) 219, 1428
PspPI GGNCC 5 cut(s) 218, 272, 407, 449, 1435
PspXI VCTCGAGB 1 cut(s) 1276
PstI CTGCAG 2 cut(s) 627, 1139
PstNI CAGNNNCTG 2 cut(s) 172, 803
PsuI RGATCY 2 cut(s) 169, 799
PsyI GACNNNGTC 1 cut(s) 1127
PteI GCGCGC 1 cut(s) 124
RsaI GTAC 1 cut(s) 1141
RsaNI GTAC 1 cut(s) 1140
RseI CAYNNNNRTG 1 cut(s) 999
SalI GTCGAC 1 cut(s) 281
SaqAI TTAA 2 cut(s) 762, 1373
SatI GCNGC 5 cut(s) 164, 210, 1326, 1449, 1515
Sau96I GGNCC 5 cut(s) 218, 272, 407, 449, 1435
ScaI AGTACT 1 cut(s) 1141
SchI GAGTC 4 cut(s) 368, 692, 732, 1000
ScrFI CCNGG 2 cut(s) 222, 411
SduI GDGCHC 2 cut(s) 645, 699
SfaNI GCATC 4 cut(s) 367, 959, 1402, 1486
SfcI CTRYAG 2 cut(s) 623, 1135
Sfr274I CTCGAG 2 cut(s) 1184, 1276
SinI GGWCC 3 cut(s) 218, 449, 1435
SlaI CTCGAG 2 cut(s) 1184, 1276
SmiMI CAYNNNNRTG 1 cut(s) 999
SmlI CTYRAG 3 cut(s) 1184, 1276, 1400
SmoI CTYRAG 3 cut(s) 1184, 1276, 1400
SpeI ACTAGT 1 cut(s) 464
Sse9I AATT 3 cut(s) 1073, 1194, 1480
SsiI CCGC 5 cut(s) 128, 161, 212, 638, 1325
SspMI CTAG 1 cut(s) 465
StyD4I CCNGG 2 cut(s) 220, 409
TaaI ACNGT 5 cut(s) 66, 280, 897, 1504, 1510
TaqI TCGA 7 cut(s) 107, 183, 282, 357, 1185, 1277, 1491
TasI AATT 3 cut(s) 1073, 1194, 1480
TatI WGTACW 1 cut(s) 1139
TauI GCSGC 1 cut(s) 1328
TfiI GAWTC 4 cut(s) 774, 1081, 1180, 1218
Tru1I TTAA 2 cut(s) 762, 1373
Tru9I TTAA 2 cut(s) 762, 1373
TscAI CASTG 3 cut(s) 211, 900, 985
TseFI GTSAC 3 cut(s) 360, 1101, 1504
TseI GCWGC 4 cut(s) 163, 209, 1448, 1514
Tsp45I GTSAC 3 cut(s) 360, 1101, 1504
TspDTI ATGAA 4 cut(s) 37, 60, 746, 1398
TspGWI ACGGA 5 cut(s) 131, 250, 379, 569, 1329
TspRI CASTG 3 cut(s) 211, 900, 985
Tth111I GACNNNGTC 1 cut(s) 1127
VpaK11BI GGWCC 3 cut(s) 218, 449, 1435
XapI RAATTY 3 cut(s) 1073, 1194, 1480
XceI RCATGY 2 cut(s) 343, 475
XhoI CTCGAG 2 cut(s) 1184, 1276
XmiI GTMKAC 2 cut(s) 119, 282
XspI CTAG 1 cut(s) 465
ZrmI AGTACT 1 cut(s) 1141
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.