Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0007698

Physical Location & Seq

Genomic Coordinates Reverse (-)

7932573 .. 7933169

Gene Structure 597 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G099300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 342 bp

ATGAGCCGTCCAATGTATGGAGGACTGCGTCTTCGGGGTGAGCTCATCAGAGCCTTCAATCTCTTCCCCAAGGAAGATATCAACATCATCGACGGCCCTGATTCCTCGATCTTCCACGATTCGCCGAGGCTCGTCGAGAAGCGCTTCAATCTCCCCAACCTCGTCGGCTCAGGAGTCTCCGTCGAGGACCTCGGCCACCATGCCGGCTACTTTAAGATCGAACATTCTCATGCCGCAAGGATATTCTACCTTTTCTTCGAGTCTCGCACAAACAATAAGGACCCTGTTGTTATATGGTTGACTGGAGGCCCAGGGTGCAGCAGTGAATTGGCTGTATTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004180 GO:0004185 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005829 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0008238 GO:0009056 GO:0009057 GO:0009987 GO:0016787 GO:0017171 GO:0019538 GO:0030163 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0051603 GO:0070008 GO:0070011 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_S10

Protein Analysis

114

Amino Acids

12.69

Weight (kDa)

6.5

Isoelectric Point (pI)

55.47

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007698)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10410
fragaria_vesca	FvH4_2g40053 FvH4_5g04771 FvH4_7g18691 FvH4_7g18691
malus_domestica	MD01G1102600.v1.1 MD07G1169500.v1.1
prunus_persica	Prupe.1G099300_v2.0.a1 Prupe.2G208200_v2.0.a1
pyrus_communis	pycom01g12900 pycom01g12910 pycom07g16320
rosa_chinensis	RchiOBHm_Chr1g0362481
rosa_laevigata	RLG00000027645
rosa_multiflora	Rmu_sc0001823.1_g000006 Rmu_sc0007589.1_g000008
rosa_roxburghii	Rroxscaffold_4G00294130
rosa_rugosa	Rorug01G0298200
rosa_samantha	Rh1AG307700 Rh1BG270800 Rh1CG288400 Rh1DG301000
rosa_wichuraiana	Rw0G003470 Rw1G027300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	17
AciI	CCGC	1 cut(s)	234
AcoI	YGGCCR	1 cut(s)	193
AfeI	AGCGCT	1 cut(s)	143
AfiI	CCNNNNNNNGG	1 cut(s)	17
AgsI	TTSAA	2 cut(s)	58, 148
AjnI	CCWGG	1 cut(s)	310
AluBI	AGCT	1 cut(s)	43
AluI	AGCT	1 cut(s)	43
Alw21I	GWGCWC	1 cut(s)	45
Alw26I	GTCTC	2 cut(s)	181, 267
Aor51HI	AGCGCT	1 cut(s)	143
AoxI	GGCC	3 cut(s)	94, 193, 307
ApeKI	GCWGC	1 cut(s)	318
ArsI	GACNNNNNNTTYG	2 cut(s)	15, 47
Asp700I	GAANNNNTTC	1 cut(s)	143
AspLEI	GCGC	1 cut(s)	144
AspS9I	GGNCC	4 cut(s)	95, 187, 280, 308
AsuHPI	GGTGA	1 cut(s)	50
AvaII	GGWCC	2 cut(s)	187, 280
BanII	GRGCYC	1 cut(s)	45
BbsI	GAAGAC	1 cut(s)	23
Bbv12I	GWGCWC	1 cut(s)	45
BbvI	GCAGC	1 cut(s)	330
BceAI	ACGGC	1 cut(s)	109
BciT130I	CCWGG	1 cut(s)	312
BcoDI	GTCTC	2 cut(s)	181, 267
BfoI	RGCGCY	1 cut(s)	145
BisI	GCNGC	2 cut(s)	234, 319
BlsI	GCNGC	2 cut(s)	235, 320
Bme1390I	CCNGG	1 cut(s)	312
Bme18I	GGWCC	2 cut(s)	187, 280
BmgT120I	GGNCC	4 cut(s)	95, 187, 280, 308
BmiI	GGNNCC	1 cut(s)	282
BmrFI	CCNGG	1 cut(s)	312
BpiI	GAAGAC	1 cut(s)	23
BpmI	CTGGAG	1 cut(s)	324
Bpu10I	CCTNAGC	1 cut(s)	169
BsaJI	CCNNGG	5 cut(s)	69, 125, 190, 310, 311
BsaXI	ACNNNNNCTCC	2 cut(s)	165, 195
Bsc4I	CCNNNNNNNGG	1 cut(s)	17
Bse118I	RCCGGY	1 cut(s)	203
Bse1I	ACTGG	1 cut(s)	307
BseBI	CCWGG	1 cut(s)	312
BseDI	CCNNGG	5 cut(s)	69, 125, 190, 310, 311
BseLI	CCNNNNNNNGG	1 cut(s)	17
BseMII	CTCAG	1 cut(s)	183
BseNI	ACTGG	1 cut(s)	307
BseXI	GCAGC	1 cut(s)	330
BsgI	GTGCAG	1 cut(s)	337
BshFI	GGCC	3 cut(s)	96, 195, 309
BsiHKAI	GWGCWC	1 cut(s)	45
BsiSI	CCGG	1 cut(s)	204
BslI	CCNNNNNNNGG	1 cut(s)	17
BsmAI	GTCTC	2 cut(s)	181, 267
BsnI	GGCC	3 cut(s)	96, 195, 309
Bsp1286I	GDGCHC	1 cut(s)	45
Bsp143I	GATC	2 cut(s)	108, 216
BspACI	CCGC	1 cut(s)	234
BspANI	GGCC	3 cut(s)	96, 195, 309
BspCNI	CTCAG	1 cut(s)	182
BspLI	GGNNCC	1 cut(s)	282
BsrFI	RCCGGY	1 cut(s)	203
BsrI	ACTGG	1 cut(s)	307
BssAI	RCCGGY	1 cut(s)	203
BssECI	CCNNGG	5 cut(s)	69, 125, 190, 310, 311
BssMI	GATC	2 cut(s)	108, 216
BssT1I	CCWWGG	1 cut(s)	69
Bst2UI	CCWGG	1 cut(s)	312
Bst6I	CTCTTC	1 cut(s)	68
BstC8I	GCNNGC	1 cut(s)	205
BstDEI	CTNAG	1 cut(s)	169
BstH2I	RGCGCY	1 cut(s)	145
BstHHI	GCGC	1 cut(s)	144
BstKTI	GATC	2 cut(s)	111, 219
BstMAI	GTCTC	2 cut(s)	181, 267
BstMBI	GATC	2 cut(s)	108, 216
BstMWI	GCNNNNNNNGC	1 cut(s)	315
BstNI	CCWGG	1 cut(s)	312
BstSCI	CCNGG	1 cut(s)	310
BstV1I	GCAGC	1 cut(s)	330
BstV2I	GAAGAC	1 cut(s)	23
BsuRI	GGCC	3 cut(s)	96, 195, 309
BtsI	GCAGTG	1 cut(s)	328
BtsIMutI	CAGTG	1 cut(s)	328
Cac8I	GCNNGC	1 cut(s)	205
CfoI	GCGC	1 cut(s)	144
Cfr10I	RCCGGY	1 cut(s)	203
Cfr13I	GGNCC	4 cut(s)	95, 187, 280, 308
CseI	GACGC	1 cut(s)	17
CviAII	CATG	2 cut(s)	200, 230
DdeI	CTNAG	1 cut(s)	169
DpnI	GATC	2 cut(s)	110, 218
DpnII	GATC	2 cut(s)	108, 216
EaeI	YGGCCR	1 cut(s)	193
Eam1104I	CTCTTC	1 cut(s)	68
EarI	CTCTTC	1 cut(s)	68
Ecl136II	GAGCTC	1 cut(s)	43
Eco130I	CCWWGG	1 cut(s)	69
Eco24I	GRGCYC	1 cut(s)	45
Eco32I	GATATC	1 cut(s)	79
Eco47I	GGWCC	2 cut(s)	187, 280
Eco47III	AGCGCT	1 cut(s)	143
Eco53kI	GAGCTC	1 cut(s)	43
EcoICRI	GAGCTC	1 cut(s)	43
EcoO109I	RGGNCCY	2 cut(s)	187, 280
EcoRII	CCWGG	1 cut(s)	310
EcoRV	GATATC	1 cut(s)	79
EcoT14I	CCWWGG	1 cut(s)	69
EcoT38I	GRGCYC	1 cut(s)	45
ErhI	CCWWGG	1 cut(s)	69
FaeI	CATG	2 cut(s)	203, 233
FaiI	YATR	5 cut(s)	18, 201, 231, 293, 295
FatI	CATG	2 cut(s)	199, 229
Fnu4HI	GCNGC	2 cut(s)	234, 319
FriOI	GRGCYC	1 cut(s)	45
Fsp4HI	GCNGC	2 cut(s)	234, 319
GlaI	GCGC	1 cut(s)	143
GluI	GCNGC	2 cut(s)	234, 319
GsuI	CTGGAG	1 cut(s)	324
HaeII	RGCGCY	1 cut(s)	145
HaeIII	GGCC	3 cut(s)	96, 195, 309
HapII	CCGG	1 cut(s)	204
HgaI	GACGC	1 cut(s)	17
HhaI	GCGC	1 cut(s)	144
Hin1II	CATG	2 cut(s)	203, 233
Hin6I	GCGC	1 cut(s)	142
HinP1I	GCGC	1 cut(s)	142
HincII	GTYRAC	1 cut(s)	300
HindII	GTYRAC	1 cut(s)	300
HinfI	GANTC	4 cut(s)	101, 119, 174, 260
HpaII	CCGG	1 cut(s)	204
HphI	GGTGA	1 cut(s)	50
Hpy166II	GTNNAC	1 cut(s)	300
Hpy188I	TCNGA	1 cut(s)	50
Hpy188III	TCNNGA	2 cut(s)	136, 171
Hpy8I	GTNNAC	1 cut(s)	300
Hpy99I	CGWCG	4 cut(s)	95, 137, 167, 185
HpyAV	CCTTC	1 cut(s)	64
HpyCH4V	TGCA	1 cut(s)	318
HpyF10VI	GCNNNNNNNGC	1 cut(s)	315
HpyF3I	CTNAG	1 cut(s)	169
Hsp92II	CATG	2 cut(s)	203, 233
HspAI	GCGC	1 cut(s)	142
KroI	GCCGGC	1 cut(s)	203
KroNI	GCCGGC	1 cut(s)	205
Kzo9I	GATC	2 cut(s)	108, 216
LpnPI	CCDG	7 cut(s)	111, 156, 217, 288, 297, 297, 324
Lsp1109I	GCAGC	1 cut(s)	330
MalI	GATC	2 cut(s)	110, 218
MboI	GATC	2 cut(s)	108, 216
MboII	GAAGA	5 cut(s)	23, 55, 86, 103, 247
MhlI	GDGCHC	1 cut(s)	45
MluCI	AATT	1 cut(s)	326
MlyI	GAGTC	2 cut(s)	183, 269
MnlI	CCTC	7 cut(s)	14, 115, 120, 170, 178, 200, 299
MroNI	GCCGGC	1 cut(s)	203
MroXI	GAANNNNTTC	1 cut(s)	143
MseI	TTAA	2 cut(s)	213, 340
MslI	CAYNNNNRTG	1 cut(s)	228
MspI	CCGG	1 cut(s)	204
MspR9I	CCNGG	1 cut(s)	312
MvaI	CCWGG	1 cut(s)	312
MwoI	GCNNNNNNNGC	1 cut(s)	315
NaeI	GCCGGC	1 cut(s)	205
NdeII	GATC	2 cut(s)	108, 216
NgoMIV	GCCGGC	1 cut(s)	203
NlaIII	CATG	2 cut(s)	203, 233
NlaIV	GGNNCC	1 cut(s)	282
NmeAIII	GCCGAG	2 cut(s)	150, 171
PasI	CCCWGGG	1 cut(s)	311
PdiI	GCCGGC	1 cut(s)	205
PdmI	GAANNNNTTC	1 cut(s)	143
PfeI	GAWTC	2 cut(s)	101, 119
PflFI	GACNNNGTC	1 cut(s)	27
PflMI	CCANNNNNTGG	1 cut(s)	17
PkrI	GCNGC	2 cut(s)	235, 320
PleI	GAGTC	2 cut(s)	182, 268
PpsI	GAGTC	2 cut(s)	182, 268
PpuMI	RGGWCCY	2 cut(s)	187, 280
Psp124BI	GAGCTC	1 cut(s)	45
Psp5II	RGGWCCY	2 cut(s)	187, 280
Psp6I	CCWGG	1 cut(s)	310
PspGI	CCWGG	1 cut(s)	310
PspN4I	GGNNCC	1 cut(s)	282
PspPI	GGNCC	4 cut(s)	95, 187, 280, 308
PspPPI	RGGWCCY	2 cut(s)	187, 280
PsyI	GACNNNGTC	1 cut(s)	27
RseI	CAYNNNNRTG	1 cut(s)	228
SacI	GAGCTC	1 cut(s)	45
SaqAI	TTAA	2 cut(s)	213, 340
SatI	GCNGC	2 cut(s)	234, 319
Sau3AI	GATC	2 cut(s)	108, 216
Sau96I	GGNCC	4 cut(s)	95, 187, 280, 308
SchI	GAGTC	2 cut(s)	183, 269
ScrFI	CCNGG	1 cut(s)	312
SduI	GDGCHC	1 cut(s)	45
SetI	ASST	4 cut(s)	45, 162, 192, 252
SinI	GGWCC	2 cut(s)	187, 280
SmiMI	CAYNNNNRTG	1 cut(s)	228
Sse9I	AATT	1 cut(s)	326
SsiI	CCGC	1 cut(s)	234
SstI	GAGCTC	1 cut(s)	45
StyD4I	CCNGG	1 cut(s)	310
StyI	CCWWGG	1 cut(s)	69
TaqI	TCGA	6 cut(s)	90, 107, 135, 183, 219, 258
TasI	AATT	1 cut(s)	326
TauI	GCSGC	1 cut(s)	236
TfiI	GAWTC	2 cut(s)	101, 119
Tru1I	TTAA	2 cut(s)	213, 340
Tru9I	TTAA	2 cut(s)	213, 340
TscAI	CASTG	1 cut(s)	328
TseI	GCWGC	1 cut(s)	318
TspGWI	ACGGA	1 cut(s)	169
TspRI	CASTG	1 cut(s)	328
Tth111I	GACNNNGTC	1 cut(s)	27
Van91I	CCANNNNNTGG	1 cut(s)	17
VpaK11BI	GGWCC	2 cut(s)	187, 280
XmnI	GAANNNNTTC	1 cut(s)	143

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.