Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004907

Physical Location & Seq

Genomic Coordinates Reverse (-)

3981880 .. 3985625

Gene Structure 3746 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G12560.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1860 bp

ATGGTGTTCAAGAGAAAGTTAGATTGCCTTTCCGTGGGATTTGATTTTCCCAACATTCCCAGAGCTCCTCGTTCATGCAGGAGGAAGGTTCTAAACAAGAGGATTGATCATGATGATGATAACACTCAGATCTGTGCAATTGACTTACTAGCTTTGGCTGGAAAGATTCTACAGGAAAGCGAGAGTTCCTCTGCGTCTTCTAATGCATTTGAAGAAATTAAGCAAGAGAAAGTAGAAAATTGCAAGACTATTAAATCTGAGTCTTCTGACCAAGGAAACTCTGTGTCAAAGCCTACTTATGATATCTCTACTGAGAAGTGTGTGGTGAACAGTTGTTTTTCATTTCCGGATAGTGACGGCGTTTTGGAGCGGACTCCGATGTCTGATTACAAGAAGATTCATGGTTTGATGGATGTAGGGTGTGAAAACAAGAATGTAAATAATGGGTTCGAGCAAGGAGAAGCAACCGATCGCGTGGGTGATGGAGGCTTAGTCACTGATACTTGCAACTTAGAGGATGCAACTGCGTTAGGTCTGCAGTTTCCGAAATCAGTCTGTGTGGGTGGTGATTTAAAATCACCATCCACCTTGGATATGACCCCTAATGGTTCCTATGCTAGACATGGGAACCATACTAACCTAGGTAGAAAAGATGATGATGAAAAATTCTATAGTTACCATAAACTTAGCAATAAATTTAAGTCGTATAGGTCTCCAACAATTCGAAGAATAAGAAAGTCCATGTCGTCCAAATACTGGAAACAAGTTCCAAAAGATTTTGGATACAGTAGAGCTGATGTGGGTGTGAAGACTCTTTATCGCAAAAGAAAATCATGTTATGGTTACAACGCATGGCAGCGTGAGATCATTTATAAGAGAAGAAGATCACCTGACAGAAGCTCGGTCGTAACTTCTGATGGAGGACTCAGTAGTGGAAGTGTTTCCAAGTTACCCAAGAAGGGAGATACAGTAAAGCTAAGCATTAAGTCCTTTAGGATTCCAGAGCTTTTTATTGAAGTTCCAGAAACTGCAACAGTAGGATCACTAAAGAGGACTGTGATGGAGGCTGTCAGTGTTTTACTCAGCGGAGGAATACGTGTTGGGGTGTTAATGCATGGGAAGAAGGTTAGAGATGAAAGGAAAACTCTGTCCCAGACTGGGATCTCATGTGATGAAAATCTAGACAACCTTGGGTTCACCTTGGAGCCTAGTCCCAGCAAAGTTCCCCTACCTTTGTGTTCTGAAGATCCTGCTGTGCCAACCGACCCTACAAGTTTGTCTGAACGGTCTGCGGCGTCTCCTATGCTAGATTCTGGAATTCCACATGCAGATGACGTGATTGATTCAAGAAATATTGTGGACAGTAACCTCGAATTAGTTCCATATCAGGGTGACATATCTGTTGATGAACCTTCATCAGATTCAAAAGAGCTTGTCCCACTTCCAGAGTTGGAAGTCAAGGCGCTTGCCATAGTTCCGTTGAACCAGAAACCTAAGCGTACTGAGCTAGCCCAGAGGAGAACTAGGAGACCCTTCTCTGTGACAGAGGTAGAAGCTCTTGTACAAGCAGTTGAGGAACTCGGGACTGGAAGATGGCGTGATGTAAAATTGCGTGCTTTCGAGGATGCAGATCATCGGACTTACGTGGACTTGAAGGACAAATGGAAGACGCTAGTTCACACAGCAAGTATATCCCCACAGCAACGAAGAGGAGAGCCGGTGCCACAAGAACTGCTAGACAGAGTCTTGAGGGCATACGGGTATTGGTCGCAGCACCAAGGAAAACATCAGGCGAGAGGAGCGTCCAAAGATCCAGACATGAACAGAGGTGGAGCTTTTGAATCAGGTGTTTCAGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000723 GO:0000781 GO:0000782 GO:0000783 GO:0000784 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003691 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008301 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016043 GO:0031627 GO:0031974 GO:0031981 GO:0032200 GO:0032991 GO:0032993 GO:0033993 GO:0034641 GO:0042162 GO:0042221 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0060249 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0097305 GO:0098687 GO:1901360 GO:1901363 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

619

Amino Acids

68.76

Weight (kDa)

8.61

Isoelectric Point (pI)

50.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ubiquitin_TPR1	PF23603	323 - 391	3.1e-36	Telomere repeat-binding protein 1-like, ubiquitin-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004907)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12560 AT3G12560 AT5G13820 AT5G13820
fragaria_vesca	FvH4_7g22710 FvH4_7g22710 FvH4_7g22710 FvH4_7g22710 FvH4_7g22710 FvH4_7g22710 FvH4_7g22710 FvH4_7g22710
malus_domestica	MD01G1135700.v1.1 MD07G1200400.v1.1
prunus_persica	Prupe.2G237100_v2.0.a1
pyrus_communis	pycom01g15650 pycom07g18730 pycom07g18740
rosa_chinensis	RchiOBHm_Chr1g0367801
rosa_laevigata	RLG00000027262
rosa_multiflora	Rmu_co8480775.1_g000001 Rmu_ssc0000395.1_g000024
rosa_roxburghii	Rroxscaffold_4G00289210
rosa_rugosa	Rorug01G0336700 Rorug01G0336800
rosa_samantha	Rh1AG343900 Rh1BG305800 Rh1CG321400 Rh1DG338000
rosa_wichuraiana	Rw1G030610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	873
AasI	GACNNNNNNGTC	1 cut(s)	379
AccB1I	GGYRCC	1 cut(s)	1720
AccB7I	CCANNNNNTGG	1 cut(s)	756
AccBSI	CCGCTC	1 cut(s)	370
AccII	CGCG	1 cut(s)	474
AccIII	TCCGGA	1 cut(s)	346
AciI	CCGC	3 cut(s)	370, 1086, 1292
AclWI	GGATC	4 cut(s)	1048, 1169, 1241, 1805
AcsI	RAATTY	3 cut(s)	665, 695, 1317
AcuI	CTGAAG	1 cut(s)	1263
AcyI	GRCGYC	1 cut(s)	1295
AfaI	GTAC	2 cut(s)	1501, 1563
AfiI	CCNNNNNNNGG	5 cut(s)	34, 756, 959, 1158, 1388
AflIII	ACRYGT	1 cut(s)	1096
AgsI	TTSAA	8 cut(s)	10, 212, 1016, 1347, 1425, 1483, 1654, 1841
AjiI	CACGTC	1 cut(s)	1336
Alw21I	GWGCWC	1 cut(s)	67
Alw26I	GTCTC	3 cut(s)	717, 1302, 1522
AlwI	GGATC	4 cut(s)	1048, 1169, 1241, 1805
AlwNI	CAGNNNCTG	1 cut(s)	1028
Ama87I	CYCGRG	1 cut(s)	1580
Aor13HI	TCCGGA	1 cut(s)	346
ApeKI	GCWGC	2 cut(s)	856, 1771
ApoI	RAATTY	3 cut(s)	665, 695, 1317
Asp700I	GAANNNNTTC	2 cut(s)	940, 1377
AspA2I	CCTAGG	1 cut(s)	640
AspLEI	GCGC	1 cut(s)	1465
AsuHPI	GGTGA	7 cut(s)	337, 491, 570, 578, 879, 1189, 1403
AsuII	TTCGAA	1 cut(s)	724
AsuNHI	GCTAGC	1 cut(s)	1507
AvaI	CYCGRG	1 cut(s)	1580
AvrII	CCTAGG	1 cut(s)	640
BanI	GGYRCC	1 cut(s)	1720
BanII	GRGCYC	1 cut(s)	67
BarI	GAAGNNNNNNTAC	2 cut(s)	1545, 1577
BbsI	GAAGAC	4 cut(s)	189, 255, 815, 1673
Bbv12I	GWGCWC	1 cut(s)	67
BbvI	GCAGC	2 cut(s)	868, 1783
BccI	CCATC	6 cut(s)	403, 476, 589, 911, 1054, 1587
BceAI	ACGGC	1 cut(s)	373
BciVI	GTATCC	1 cut(s)	776
BclI	TGATCA	1 cut(s)	106
BcoDI	GTCTC	3 cut(s)	717, 1302, 1522
BfmI	CTRYAG	3 cut(s)	170, 536, 670
BfoI	RGCGCY	1 cut(s)	1466
BfuI	GTATCC	1 cut(s)	776
BglII	AGATCT	1 cut(s)	129
BisI	GCNGC	3 cut(s)	857, 1293, 1772
BlnI	CCTAGG	1 cut(s)	640
BlpI	GCTNAGC	1 cut(s)	977
BlsI	GCNGC	3 cut(s)	858, 1294, 1773
BmeT110I	CYCGRG	1 cut(s)	1580
BmgBI	CACGTC	1 cut(s)	1336
BmiI	GGNNCC	4 cut(s)	610, 629, 1206, 1722
BmrI	ACTGGG	1 cut(s)	1167
BmsI	GCATC	2 cut(s)	508, 1615
BmtI	GCTAGC	1 cut(s)	1511
BmuI	ACTGGG	1 cut(s)	1167
BpiI	GAAGAC	4 cut(s)	189, 255, 815, 1673
BplI	GAGNNNNNCTC	2 cut(s)	173, 205
Bpu10I	CCTNAGC	1 cut(s)	1494
Bpu1102I	GCTNAGC	1 cut(s)	977
Bpu14I	TTCGAA	1 cut(s)	724
BpuEI	CTTGAG	1 cut(s)	1768
BsaAI	YACGTR	2 cut(s)	1097, 1645
BsaBI	GATNNNNATC	2 cut(s)	1176, 1629
BsaHI	GRCGYC	1 cut(s)	1295
BsaI	GGTCTC	2 cut(s)	717, 1522
BsaJI	CCNNGG	7 cut(s)	33, 271, 588, 640, 1189, 1200, 1777
BsaWI	WCCGGW	1 cut(s)	346
BsaXI	ACNNNNNCTCC	6 cut(s)	477, 507, 954, 984, 1704, 1734
Bsc4I	CCNNNNNNNGG	5 cut(s)	34, 756, 959, 1158, 1388
Bse118I	RCCGGY	1 cut(s)	1717
Bse1I	ACTGG	3 cut(s)	761, 1162, 1591
Bse8I	GATNNNNATC	2 cut(s)	1176, 1629
BseAI	TCCGGA	1 cut(s)	346
BseDI	CCNNGG	7 cut(s)	33, 271, 588, 640, 1189, 1200, 1777
BseGI	GGATG	4 cut(s)	418, 523, 581, 1630
BseJI	GATNNNNATC	2 cut(s)	1176, 1629
BseLI	CCNNNNNNNGG	5 cut(s)	34, 756, 959, 1158, 1388
BseMII	CTCAG	6 cut(s)	140, 249, 303, 940, 1096, 1494
BseNI	ACTGG	3 cut(s)	761, 1162, 1591
BseRI	GAGGAG	4 cut(s)	57, 1531, 1725, 1812
BseXI	GCAGC	2 cut(s)	868, 1783
BseYI	CCCAGC	1 cut(s)	1214
Bsh1236I	CGCG	1 cut(s)	474
Bsh1285I	CGRYCG	2 cut(s)	472, 906
BshNI	GGYRCC	1 cut(s)	1720
BsiEI	CGRYCG	2 cut(s)	472, 906
BsiHKAI	GWGCWC	1 cut(s)	67
BsiHKCI	CYCGRG	1 cut(s)	1580
BsiSI	CCGG	2 cut(s)	347, 1718
BslFI	GGGAC	4 cut(s)	1135, 1197, 1421, 1597
BslI	CCNNNNNNNGG	5 cut(s)	34, 756, 959, 1158, 1388
BsmAI	GTCTC	3 cut(s)	717, 1302, 1522
BsmBI	CGTCTC	1 cut(s)	1302
BsmFI	GGGAC	4 cut(s)	1135, 1197, 1421, 1597
Bso31I	GGTCTC	2 cut(s)	717, 1522
BsoBI	CYCGRG	1 cut(s)	1580
Bsp119I	TTCGAA	1 cut(s)	724
Bsp1286I	GDGCHC	1 cut(s)	67
Bsp13I	TCCGGA	1 cut(s)	346
Bsp1407I	TGTACA	1 cut(s)	1561
Bsp1720I	GCTNAGC	1 cut(s)	977
BspACI	CCGC	3 cut(s)	370, 1086, 1292
BspCNI	CTCAG	6 cut(s)	139, 250, 304, 939, 1095, 1495
BspEI	TCCGGA	1 cut(s)	346
BspFNI	CGCG	1 cut(s)	474
BspHI	TCATGA	1 cut(s)	109
BspLI	GGNNCC	4 cut(s)	610, 629, 1206, 1722
BspMAI	CTGCAG	1 cut(s)	540
BspOI	GCTAGC	1 cut(s)	1511
BspPI	GGATC	4 cut(s)	1048, 1169, 1241, 1805
BspT104I	TTCGAA	1 cut(s)	724
BspT107I	GGYRCC	1 cut(s)	1720
BspTNI	GGTCTC	2 cut(s)	717, 1522
BsrBI	CCGCTC	1 cut(s)	370
BsrFI	RCCGGY	1 cut(s)	1717
BsrGI	TGTACA	1 cut(s)	1561
BsrI	ACTGG	3 cut(s)	761, 1162, 1591
BssAI	RCCGGY	1 cut(s)	1717
BssECI	CCNNGG	7 cut(s)	33, 271, 588, 640, 1189, 1200, 1777
BssNI	GRCGYC	1 cut(s)	1295
BssT1I	CCWWGG	6 cut(s)	271, 588, 640, 1189, 1200, 1777
Bst4CI	ACNGT	7 cut(s)	332, 788, 970, 1036, 1057, 1287, 1364
Bst6I	CTCTTC	1 cut(s)	1702
BstACI	GRCGYC	1 cut(s)	1295
BstAUI	TGTACA	1 cut(s)	1561
BstBAI	YACGTR	2 cut(s)	1097, 1645
BstBI	TTCGAA	1 cut(s)	724
BstC8I	GCNNGC	3 cut(s)	1467, 1509, 1614
BstDSI	CCRYGG	1 cut(s)	33
BstF5I	GGATG	4 cut(s)	418, 523, 581, 1630
BstFNI	CGCG	1 cut(s)	474
BstH2I	RGCGCY	1 cut(s)	1466
BstHHI	GCGC	1 cut(s)	1465
BstMAI	GTCTC	3 cut(s)	717, 1302, 1522
BstMCI	CGRYCG	2 cut(s)	472, 906
BstMWI	GCNNNNNNNGC	2 cut(s)	1504, 1799
BstNSI	RCATGY	1 cut(s)	1328
BstSFI	CTRYAG	3 cut(s)	170, 536, 670
BstUI	CGCG	1 cut(s)	474
BstV1I	GCAGC	2 cut(s)	868, 1783
BstV2I	GAAGAC	4 cut(s)	189, 255, 815, 1673
BstX2I	RGATCY	4 cut(s)	129, 1161, 1246, 1810
BstYI	RGATCY	4 cut(s)	129, 1161, 1246, 1810
BsuI	GTATCC	1 cut(s)	776
BtgI	CCRYGG	1 cut(s)	33
BtrI	CACGTC	1 cut(s)	1336
BtsCI	GGATG	4 cut(s)	418, 523, 581, 1630
BtsIMutI	CAGTG	3 cut(s)	495, 1078, 1860
Cac8I	GCNNGC	3 cut(s)	1467, 1509, 1614
CaiI	CAGNNNCTG	1 cut(s)	1028
CciI	TCATGA	1 cut(s)	109
CfoI	GCGC	1 cut(s)	1465
Cfr10I	RCCGGY	1 cut(s)	1717
CseI	GACGC	4 cut(s)	183, 1284, 1678, 1791
Csp6I	GTAC	2 cut(s)	1500, 1562
CviQI	GTAC	2 cut(s)	1500, 1562
DraI	TTTAAA	1 cut(s)	573
DrdI	GACNNNNNNGTC	1 cut(s)	379
DseDI	GACNNNNNNGTC	1 cut(s)	379
Eam1104I	CTCTTC	1 cut(s)	1702
EarI	CTCTTC	1 cut(s)	1702
Ecl136II	GAGCTC	1 cut(s)	65
Eco130I	CCWWGG	6 cut(s)	271, 588, 640, 1189, 1200, 1777
Eco24I	GRGCYC	1 cut(s)	67
Eco31I	GGTCTC	2 cut(s)	717, 1522
Eco32I	GATATC	1 cut(s)	304
Eco53kI	GAGCTC	1 cut(s)	65
Eco57I	CTGAAG	1 cut(s)	1263
Eco88I	CYCGRG	1 cut(s)	1580
EcoICRI	GAGCTC	1 cut(s)	65
EcoRI	GAATTC	1 cut(s)	1317
EcoRV	GATATC	1 cut(s)	304
EcoT14I	CCWWGG	6 cut(s)	271, 588, 640, 1189, 1200, 1777
EcoT22I	ATGCAT	2 cut(s)	208, 1116
EcoT38I	GRGCYC	1 cut(s)	67
ErhI	CCWWGG	6 cut(s)	271, 588, 640, 1189, 1200, 1777
Esp3I	CGTCTC	1 cut(s)	1302
FaqI	GGGAC	4 cut(s)	1135, 1197, 1421, 1597
FbaI	TGATCA	1 cut(s)	106
Fnu4HI	GCNGC	3 cut(s)	857, 1293, 1772
FokI	GGATG	4 cut(s)	425, 530, 568, 1637
FriOI	GRGCYC	1 cut(s)	67
Fsp4HI	GCNGC	3 cut(s)	857, 1293, 1772
GlaI	GCGC	1 cut(s)	1464
GluI	GCNGC	3 cut(s)	857, 1293, 1772
GsaI	CCCAGC	1 cut(s)	1218
HaeII	RGCGCY	1 cut(s)	1466
HapII	CCGG	2 cut(s)	347, 1718
HgaI	GACGC	4 cut(s)	183, 1284, 1678, 1791
HhaI	GCGC	1 cut(s)	1465
Hin1I	GRCGYC	1 cut(s)	1295
Hin6I	GCGC	1 cut(s)	1463
HinP1I	GCGC	1 cut(s)	1463
HpaII	CCGG	2 cut(s)	347, 1718
HphI	GGTGA	7 cut(s)	337, 491, 570, 578, 879, 1189, 1403
Hpy166II	GTNNAC	5 cut(s)	328, 1197, 1360, 1648, 1678
Hpy8I	GTNNAC	5 cut(s)	328, 1197, 1360, 1648, 1678
HpyAV	CCTTC	6 cut(s)	79, 952, 1117, 1422, 1543, 1648
HpyCH4III	ACNGT	7 cut(s)	332, 788, 970, 1036, 1057, 1287, 1364
HpyCH4IV	ACGT	3 cut(s)	1096, 1335, 1644
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1504, 1799
HpySE526I	ACGT	3 cut(s)	1096, 1335, 1644
Hsp92I	GRCGYC	1 cut(s)	1295
HspAI	GCGC	1 cut(s)	1463
Kpn2I	TCCGGA	1 cut(s)	346
Ksp22I	TGATCA	1 cut(s)	106
LmnI	GCTCC	5 cut(s)	70, 367, 1204, 1799, 1832
Lsp1109I	GCAGC	2 cut(s)	868, 1783
LweI	GCATC	2 cut(s)	508, 1615
MaeII	ACGT	3 cut(s)	1096, 1335, 1644
MaeIII	GTNAC	9 cut(s)	353, 493, 674, 842, 907, 948, 1364, 1391, 1540
MbiI	CCGCTC	1 cut(s)	370
MfeI	CAATTG	1 cut(s)	138
MflI	RGATCY	4 cut(s)	129, 1161, 1246, 1810
MhlI	GDGCHC	1 cut(s)	67
MluCI	AATT	9 cut(s)	138, 216, 238, 665, 695, 720, 1317, 1373, 1607
MlyI	GAGTC	5 cut(s)	269, 367, 805, 918, 1752
MmeI	TCCRAC	2 cut(s)	740, 1431
Mph1103I	ATGCAT	2 cut(s)	208, 1116
MroI	TCCGGA	1 cut(s)	346
MroXI	GAANNNNTTC	2 cut(s)	940, 1377
MseI	TTAA	6 cut(s)	219, 252, 572, 699, 984, 1109
MslI	CAYNNNNRTG	2 cut(s)	114, 1329
MspA1I	CMGCKG	1 cut(s)	1086
MspI	CCGG	2 cut(s)	347, 1718
MunI	CAATTG	1 cut(s)	138
MvnI	CGCG	1 cut(s)	474
MwoI	GCNNNNNNNGC	2 cut(s)	1504, 1799
NheI	GCTAGC	1 cut(s)	1507
NlaIV	GGNNCC	4 cut(s)	610, 629, 1206, 1722
NmuCI	GTSAC	4 cut(s)	353, 493, 1391, 1540
NsiI	ATGCAT	2 cut(s)	208, 1116
NspI	RCATGY	1 cut(s)	1328
NspV	TTCGAA	1 cut(s)	724
PagI	TCATGA	1 cut(s)	109
PdmI	GAANNNNTTC	2 cut(s)	940, 1377
PfeI	GAWTC	7 cut(s)	166, 397, 997, 1310, 1343, 1421, 1841
PflFI	GACNNNGTC	1 cut(s)	1742
PflMI	CCANNNNNTGG	1 cut(s)	756
PkrI	GCNGC	3 cut(s)	858, 1294, 1773
Ple19I	CGATCG	1 cut(s)	472
PleI	GAGTC	5 cut(s)	268, 367, 805, 918, 1751
PpsI	GAGTC	5 cut(s)	268, 367, 805, 918, 1751
Ppu21I	YACGTR	2 cut(s)	1097, 1645
PsiI	TTATAA	1 cut(s)	873
Psp124BI	GAGCTC	1 cut(s)	67
PspFI	CCCAGC	1 cut(s)	1214
PspN4I	GGNNCC	4 cut(s)	610, 629, 1206, 1722
PstI	CTGCAG	1 cut(s)	540
PstNI	CAGNNNCTG	1 cut(s)	1028
PsuI	RGATCY	4 cut(s)	129, 1161, 1246, 1810
PsyI	GACNNNGTC	1 cut(s)	1742
PvuI	CGATCG	1 cut(s)	472
RsaI	GTAC	2 cut(s)	1501, 1563
RsaNI	GTAC	2 cut(s)	1500, 1562
RseI	CAYNNNNRTG	2 cut(s)	114, 1329
SacI	GAGCTC	1 cut(s)	67
SaqAI	TTAA	6 cut(s)	219, 252, 572, 699, 984, 1109
SatI	GCNGC	3 cut(s)	857, 1293, 1772
SchI	GAGTC	5 cut(s)	269, 367, 805, 918, 1752
SduI	GDGCHC	1 cut(s)	67
SfaNI	GCATC	2 cut(s)	508, 1615
SfcI	CTRYAG	3 cut(s)	170, 536, 670
SfuI	TTCGAA	1 cut(s)	724
SmiMI	CAYNNNNRTG	2 cut(s)	114, 1329
SmlI	CTYRAG	1 cut(s)	1747
SmoI	CTYRAG	1 cut(s)	1747
Sse9I	AATT	9 cut(s)	138, 216, 238, 665, 695, 720, 1317, 1373, 1607
SsiI	CCGC	3 cut(s)	370, 1086, 1292
SspI	AATATT	1 cut(s)	1354
SstI	GAGCTC	1 cut(s)	67
StyI	CCWWGG	6 cut(s)	271, 588, 640, 1189, 1200, 1777
TaaI	ACNGT	7 cut(s)	332, 788, 970, 1036, 1057, 1287, 1364
TaiI	ACGT	3 cut(s)	1099, 1338, 1647
TaqI	TCGA	4 cut(s)	450, 724, 1371, 1620
TaqII	GACCGA	1 cut(s)	892
TasI	AATT	9 cut(s)	138, 216, 238, 665, 695, 720, 1317, 1373, 1607
TatI	WGTACW	1 cut(s)	1561
TauI	GCSGC	1 cut(s)	1295
TfiI	GAWTC	7 cut(s)	166, 397, 997, 1310, 1343, 1421, 1841
Tru1I	TTAA	6 cut(s)	219, 252, 572, 699, 984, 1109
Tru9I	TTAA	6 cut(s)	219, 252, 572, 699, 984, 1109
TscAI	CASTG	3 cut(s)	502, 1078, 1860
TseFI	GTSAC	4 cut(s)	353, 493, 1391, 1540
TseI	GCWGC	2 cut(s)	856, 1771
Tsp45I	GTSAC	4 cut(s)	353, 493, 1391, 1540
TspDTI	ATGAA	9 cut(s)	63, 330, 389, 675, 1149, 1188, 1404, 1422, 1835
TspGWI	ACGGA	2 cut(s)	22, 1467
TspRI	CASTG	3 cut(s)	502, 1078, 1860
Tth111I	GACNNNGTC	1 cut(s)	1742
Van91I	CCANNNNNTGG	1 cut(s)	756
XapI	RAATTY	3 cut(s)	665, 695, 1317
XbaI	TCTAGA	1 cut(s)	1180
XceI	RCATGY	1 cut(s)	1328
XmaJI	CCTAGG	1 cut(s)	640
XmnI	GAANNNNTTC	2 cut(s)	940, 1377
Zsp2I	ATGCAT	2 cut(s)	208, 1116

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.