Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0004907

Physical Location & Seq

Genomic Coordinates Forward (+)

24489186 .. 24494407

Gene Structure 5222 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1135700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2037 bp

ATGGGGTTGAAGAAGAGGCTAGATTTTGGATTTAATGGCTTCCAGGTCCCTAATATACCTAGAGCTCCCAGATCAGCTAGGAGGGGCCCGCATAGGAAGTCAGTCAAGGATGGCCAAATCAGTGCCTTTGAATTATTGGCTTCTTTAGCTGGCAAGTTGTTGCAGGAGAGTGAAAGTTCTGCCTCCAGTAATGCTTCTGAAGGAAATTTGCAGCCTGCCTTTGGCATAGATGTTAAGCTGGAAAGACAAGATGAACATAAACCTCTAAAAGAAGAGTGCCTTGATCAGGGAAGCTCTGAAGAAAGTGTTTCTTTAGGGCTGACATCCCAAAACATCAATCGGAAGGGTATTATAAAAGAATTTCCGCATGCCGACAGTGATACTGTTTTGGAACGCACTTCAGTTATTACAAGTTCTGACAGCTCTGCAAAAGCTGGGCGTCATGCTAAGTCTGTAATTTGCAGTAGCAGGCCCACATTTCAGAAATATTCTGGTAAGGTAGAGGGAGACTCCCCGGGTATTGTGGAGTCCTGTTATGGTAATGTAGCAACTGGAATTGAAGTACAGGGAGATAGTAAGCCGTTAGAAACTGGATCTTTGAAGATAGCTAACCCATGCAGTTCAAAGGATCCAACCGAACTGCATGCAAACTATCCTGCAATGCTCAATGGAGACAGCAATGTCAAATTGTCATTGTTCAGGGATCCTATTCCTAATGCTTCTTTTTCCAGGCATAGGAATGATATTGAATTAGGTAGTAGAGATGATGACGAAAAAATTTCTAGGTGCATTAAACCTAGCAATAGGGTGAAGGTCTGTAGGCCTCCACCACGTGTTGGAGGCCAAAGAATAAGGAAGTTACCGTCATCCAAGTACTGGAAAGCGACTCCAAAGTTGAGGGAATTTGAACACTATAGATATGATGGGGGAGTAAAACCTATTTATCACAAAAGGAAAACCTTTTACAACCGTGAAAGATCTCAACGTGACACTCTTTATAAGAGGAGGAAACTAGTTGACCGGAGTTCGGTAGTGACTTCTGATGGAGGGTTTAGTGGTGAAAGTGTTTCTAATTCACCTGATAACGGAGATAAAACTGGTCCAGCCGCAAACGGAGTATCAGCTTCAGTTATTGGTCATCAAGCATCTTTTCGCTCTGAGGAATCTCATGTGAAATTGAAAATCAAATCCTTTAGGGTGCCAGAGCTAGTCATTGAGGTCTCAGAAACTGAAACTGTCGGTTCATTGAAGAGGACAGTCATGGATGCAGTGAATGCCATACTTAGGGATGGATTAAGTGTTGGAGTACTTGTTCAAGGGAAAAAGATGACAGATGACTACAGAACTCTAATGCAGATGGGAATTTCATCCAAAGACAGTTTGGATTCTCTGGATTTTATGTTGGAGCCTAGTCCCATGCAAGCCCTTCCATCTTTGTGTTCTGGCGACCCTCCTTCACTATCATGCGAGACATCTGTACTCGTGACCAGGTCCCCAGGCACACCTGTTTTGGACTCTACAATGTCCGATGTGTTATCTGACCTTCCTCCTATAACCAATTCAGGCAGTCTTGCTGAAACTAAGCATGAACCAGTTTCGTCCCATATTGACATATTGACCGACAAAACAATGCTGGAATCGCAGGCGCTAGTTGCTATTCCAGAAATGAGCATGGAGCCACTAGCCGTAGTTCCTGTGAGCCAGAAAACTAAGCGATCAGAGCTTGCACAGCGTCGAACCAGGAGACCATTCTCTGTCTCAGAAGTCGAAGCATTGGTGACCGCAGTTGAGGAACTTGGCACTGGAAGGTGGCGCGATGTTAAATTGCGTGCATTTGAGAATGCAGACCATCGAACTTACGTGGACTTGAAGGATAAATGGAAAACCTTAGTCCACACTGCGAAAATCTCTCCTCAGCAAAGAAGGGGAGAGCCAGTCCCGCAGGAGCTTTTGGACCGAGTGTTGGCTGCCCATTCGTACTGGTGCCAACACCAAGCCAAGCAACACGGCAAGCACCCAGCCTTGCCGGCATTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000723 GO:0000781 GO:0000782 GO:0000783 GO:0000784 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003691 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008301 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016043 GO:0031627 GO:0031974 GO:0031981 GO:0032200 GO:0032991 GO:0032993 GO:0033993 GO:0034641 GO:0042162 GO:0042221 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0060249 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0097305 GO:0098687 GO:1901360 GO:1901363 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

679

Amino Acids

74.64

Weight (kDa)

9.05

Isoelectric Point (pI)

52.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ubiquitin_TPR1	PF23603	390 - 457	5.3e-34	Telomere repeat-binding protein 1-like, ubiquitin-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004907)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12560 AT3G12560 AT5G13820 AT5G13820
fragaria_vesca	FvH4_7g22710 FvH4_7g22710 FvH4_7g22710 FvH4_7g22710 FvH4_7g22710 FvH4_7g22710 FvH4_7g22710 FvH4_7g22710
malus_domestica	MD01G1135700.v1.1 MD07G1200400.v1.1
prunus_persica	Prupe.2G237100_v2.0.a1
pyrus_communis	pycom01g15650 pycom07g18730 pycom07g18740
rosa_chinensis	RchiOBHm_Chr1g0367801
rosa_laevigata	RLG00000027262
rosa_multiflora	Rmu_co8480775.1_g000001 Rmu_ssc0000395.1_g000024
rosa_roxburghii	Rroxscaffold_4G00289210
rosa_rugosa	Rorug01G0336700 Rorug01G0336800
rosa_samantha	Rh1AG343900 Rh1BG305800 Rh1CG321400 Rh1DG338000
rosa_wichuraiana	Rw1G030610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	353, 999
AasI	GACNNNNNNGTC	1 cut(s)	680
AccB1I	GGYRCC	2 cut(s)	1198, 1983
AccB7I	CCANNNNNTGG	2 cut(s)	836, 876
AccII	CGCG	1 cut(s)	1815
AciI	CCGC	5 cut(s)	89, 365, 1107, 1782, 1940
AclWI	GGATC	5 cut(s)	601, 623, 636, 698, 711
AcoI	YGGCCR	1 cut(s)	112
AcsI	RAATTY	5 cut(s)	205, 359, 777, 902, 1362
AcuI	CTGAAG	4 cut(s)	219, 318, 384, 1110
AcvI	CACGTG	1 cut(s)	833
AcyI	GRCGYC	1 cut(s)	439
AdeI	CACNNNGTG	1 cut(s)	833
AfaI	GTAC	5 cut(s)	564, 875, 1308, 1479, 1979
AfiI	CCNNNNNNNGG	9 cut(s)	221, 286, 735, 836, 876, 1027, 1085, 1284, 1963
AflIII	ACRYGT	1 cut(s)	832
AhlI	ACTAGT	1 cut(s)	1012
AjnI	CCWGG	5 cut(s)	42, 728, 1487, 1495, 1739
AloI	GAACNNNNNNTCC	2 cut(s)	1296, 1328
Alw21I	GWGCWC	1 cut(s)	67
Alw26I	GTCTC	6 cut(s)	501, 666, 1225, 1463, 1738, 1762
AlwI	GGATC	5 cut(s)	601, 623, 636, 698, 711
AlwNI	CAGNNNCTG	1 cut(s)	1229
Ama87I	CYCGRG	1 cut(s)	514
AoxI	GGCC	5 cut(s)	85, 112, 470, 821, 841
ApaI	GGGCCC	1 cut(s)	89
ApeKI	GCWGC	2 cut(s)	211, 1967
ApoI	RAATTY	5 cut(s)	205, 359, 777, 902, 1362
AspLEI	GCGC	2 cut(s)	1648, 1815
AspS9I	GGNCC	7 cut(s)	46, 85, 86, 471, 1100, 1491, 1954
AsuC2I	CCSGG	2 cut(s)	515, 516
AsuHPI	GGTGA	4 cut(s)	820, 1068, 1070, 1789
AvaI	CYCGRG	1 cut(s)	514
AvaII	GGWCC	4 cut(s)	46, 1100, 1491, 1954
BaeGI	GKGCMC	1 cut(s)	89
BalI	TGGCCA	1 cut(s)	114
BamHI	GGATCC	2 cut(s)	628, 703
BanI	GGYRCC	2 cut(s)	1198, 1983
BanII	GRGCYC	2 cut(s)	67, 89
BauI	CACGAG	1 cut(s)	1481
BbrPI	CACGTG	1 cut(s)	833
Bbv12I	GWGCWC	1 cut(s)	67
BbvCI	CCTCAGC	1 cut(s)	1914
BbvI	GCAGC	2 cut(s)	223, 1954
BccI	CCATC	7 cut(s)	104, 917, 1037, 1283, 1351, 1438, 1857
BceAI	ACGGC	3 cut(s)	565, 1670, 2023
BcgI	CGANNNNNNTGC	2 cut(s)	626, 660
BciT130I	CCWGG	5 cut(s)	44, 730, 1489, 1497, 1741
BclI	TGATCA	1 cut(s)	283
BcnI	CCSGG	2 cut(s)	515, 516
BcoDI	GTCTC	6 cut(s)	501, 666, 1225, 1463, 1738, 1762
BcuI	ACTAGT	1 cut(s)	1012
BfmI	CTRYAG	3 cut(s)	817, 913, 1339
BfoI	RGCGCY	1 cut(s)	1649
BglI	GCCNNNNNGGC	1 cut(s)	2027
BglII	AGATCT	1 cut(s)	977
BisI	GCNGC	3 cut(s)	212, 1107, 1968
BlsI	GCNGC	3 cut(s)	213, 1108, 1969
BmcAI	AGTACT	2 cut(s)	875, 1308
Bme1390I	CCNGG	7 cut(s)	44, 515, 516, 730, 1489, 1497, 1741
Bme18I	GGWCC	4 cut(s)	46, 1100, 1491, 1954
BmeT110I	CYCGRG	1 cut(s)	514
BmgT120I	GGNCC	7 cut(s)	46, 85, 86, 471, 1100, 1491, 1954
BmrFI	CCNGG	7 cut(s)	44, 515, 516, 730, 1489, 1497, 1741
BmsI	GCATC	2 cut(s)	1154, 1255
BplI	GAGNNNNNCTC	2 cut(s)	494, 526
BpmI	CTGGAG	1 cut(s)	169
Bpu10I	CCTNAGC	1 cut(s)	1914
BpuMI	CCSGG	2 cut(s)	515, 516
BsaAI	YACGTR	2 cut(s)	833, 1861
BsaHI	GRCGYC	1 cut(s)	439
BsaI	GGTCTC	2 cut(s)	1225, 1738
BsaJI	CCNNGG	3 cut(s)	513, 514, 1495
BsaWI	WCCGGW	1 cut(s)	1020
BsaXI	ACNNNNNCTCC	4 cut(s)	1296, 1326, 1920, 1950
Bsc4I	CCNNNNNNNGG	9 cut(s)	221, 286, 735, 836, 876, 1027, 1085, 1284, 1963
Bse118I	RCCGGY	1 cut(s)	2026
Bse1I	ACTGG	9 cut(s)	186, 556, 595, 881, 1102, 1592, 1807, 1934, 1985
Bse3DI	GCAATG	2 cut(s)	666, 685
BseBI	CCWGG	5 cut(s)	44, 730, 1489, 1497, 1741
BseDI	CCNNGG	3 cut(s)	513, 514, 1495
BseGI	GGATG	6 cut(s)	115, 323, 866, 1270, 1294, 1367
BseLI	CCNNNNNNNGG	9 cut(s)	221, 286, 735, 836, 876, 1027, 1085, 1284, 1963
BseMI	GCAATG	2 cut(s)	666, 685
BseMII	CTCAG	4 cut(s)	1149, 1236, 1773, 1928
BseNI	ACTGG	9 cut(s)	186, 556, 595, 881, 1102, 1592, 1807, 1934, 1985
BseRI	GAGGAG	2 cut(s)	1018, 1902
BseSI	GKGCMC	1 cut(s)	89
BseXI	GCAGC	2 cut(s)	223, 1954
BseYI	CCCAGC	2 cut(s)	434, 2017
Bsh1236I	CGCG	1 cut(s)	1815
BshFI	GGCC	5 cut(s)	87, 114, 472, 823, 843
BshNI	GGYRCC	2 cut(s)	1198, 1983
BsiHKAI	GWGCWC	1 cut(s)	67
BsiHKCI	CYCGRG	1 cut(s)	514
BsiSI	CCGG	3 cut(s)	515, 1021, 2027
BslFI	GGGAC	5 cut(s)	32, 1398, 1477, 1585, 1922
BslI	CCNNNNNNNGG	9 cut(s)	221, 286, 735, 836, 876, 1027, 1085, 1284, 1963
BsmAI	GTCTC	6 cut(s)	501, 666, 1225, 1463, 1738, 1762
BsmFI	GGGAC	5 cut(s)	32, 1398, 1477, 1585, 1922
BsmI	GAATGC	3 cut(s)	1279, 1846, 2030
BsnI	GGCC	5 cut(s)	87, 114, 472, 823, 843
Bso31I	GGTCTC	2 cut(s)	1225, 1738
BsoBI	CYCGRG	1 cut(s)	514
Bsp120I	GGGCCC	1 cut(s)	85
Bsp1286I	GDGCHC	2 cut(s)	67, 89
Bsp143I	GATC	7 cut(s)	71, 283, 593, 628, 703, 977, 1715
BspACI	CCGC	5 cut(s)	89, 365, 1107, 1782, 1940
BspANI	GGCC	5 cut(s)	87, 114, 472, 823, 843
BspCNI	CTCAG	4 cut(s)	1150, 1235, 1772, 1927
BspFNI	CGCG	1 cut(s)	1815
BspPI	GGATC	5 cut(s)	601, 623, 636, 698, 711
BspT107I	GGYRCC	2 cut(s)	1198, 1983
BspTNI	GGTCTC	2 cut(s)	1225, 1738
BsrDI	GCAATG	2 cut(s)	666, 685
BsrFI	RCCGGY	1 cut(s)	2026
BsrI	ACTGG	9 cut(s)	186, 556, 595, 881, 1102, 1592, 1807, 1934, 1985
BssAI	RCCGGY	1 cut(s)	2026
BssECI	CCNNGG	3 cut(s)	513, 514, 1495
BssMI	GATC	7 cut(s)	71, 283, 593, 628, 703, 977, 1715
BssNI	GRCGYC	1 cut(s)	439
BssSI	CACGAG	1 cut(s)	1481
Bst2BI	CACGAG	1 cut(s)	1481
Bst2UI	CCWGG	5 cut(s)	44, 730, 1489, 1497, 1741
Bst4CI	ACNGT	7 cut(s)	377, 385, 864, 971, 1237, 1258, 1379
Bst6I	CTCTTC	3 cut(s)	8, 267, 1244
BstACI	GRCGYC	1 cut(s)	439
BstAPI	GCANNNNNTGC	1 cut(s)	1274
BstBAI	YACGTR	2 cut(s)	833, 1861
BstDEI	CTNAG	9 cut(s)	447, 1158, 1222, 1283, 1581, 1710, 1759, 1888, 1914
BstEII	GGTNACC	1 cut(s)	1777
BstENI	CCTNNNNNAGG	1 cut(s)	284
BstF5I	GGATG	6 cut(s)	115, 323, 866, 1270, 1294, 1367
BstFNI	CGCG	1 cut(s)	1815
BstH2I	RGCGCY	1 cut(s)	1649
BstHHI	GCGC	2 cut(s)	1648, 1815
BstKTI	GATC	7 cut(s)	74, 286, 596, 631, 706, 980, 1718
BstMAI	GTCTC	6 cut(s)	501, 666, 1225, 1463, 1738, 1762
BstMBI	GATC	7 cut(s)	71, 283, 593, 628, 703, 977, 1715
BstMWI	GCNNNNNNNGC	8 cut(s)	146, 1274, 1639, 1652, 1720, 1729, 1939, 2027
BstNI	CCWGG	5 cut(s)	44, 730, 1489, 1497, 1741
BstNSI	RCATGY	2 cut(s)	371, 647
BstPI	GGTNACC	1 cut(s)	1777
BstSCI	CCNGG	7 cut(s)	42, 513, 514, 728, 1487, 1495, 1739
BstSFI	CTRYAG	3 cut(s)	817, 913, 1339
BstSLI	GKGCMC	1 cut(s)	89
BstUI	CGCG	1 cut(s)	1815
BstV1I	GCAGC	2 cut(s)	223, 1954
BstX2I	RGATCY	4 cut(s)	593, 628, 703, 977
BstYI	RGATCY	4 cut(s)	593, 628, 703, 977
BsuRI	GGCC	5 cut(s)	87, 114, 472, 823, 843
BtgZI	GCGATG	1 cut(s)	1830
BtsCI	GGATG	6 cut(s)	115, 323, 866, 1270, 1294, 1367
BtsI	GCAGTG	2 cut(s)	1275, 1896
BtsIMutI	CAGTG	5 cut(s)	127, 382, 1275, 1800, 1896
CaiI	CAGNNNCTG	1 cut(s)	1229
CfoI	GCGC	2 cut(s)	1648, 1815
Cfr10I	RCCGGY	1 cut(s)	2026
Cfr13I	GGNCC	7 cut(s)	46, 85, 86, 471, 1100, 1491, 1954
Cfr9I	CCCGGG	1 cut(s)	514
CseI	GACGC	2 cut(s)	428, 1721
CsiI	ACCWGGT	1 cut(s)	1487
Csp6I	GTAC	5 cut(s)	563, 874, 1307, 1478, 1978
CviQI	GTAC	5 cut(s)	563, 874, 1307, 1478, 1978
DdeI	CTNAG	9 cut(s)	447, 1158, 1222, 1283, 1581, 1710, 1759, 1888, 1914
DpnI	GATC	7 cut(s)	73, 285, 595, 630, 705, 979, 1717
DpnII	GATC	7 cut(s)	71, 283, 593, 628, 703, 977, 1715
DraIII	CACNNNGTG	1 cut(s)	833
DrdI	GACNNNNNNGTC	1 cut(s)	680
DseDI	GACNNNNNNGTC	1 cut(s)	680
EaeI	YGGCCR	1 cut(s)	112
Eam1104I	CTCTTC	3 cut(s)	8, 267, 1244
EarI	CTCTTC	3 cut(s)	8, 267, 1244
Ecl136II	GAGCTC	1 cut(s)	65
Eco147I	AGGCCT	1 cut(s)	823
Eco24I	GRGCYC	2 cut(s)	67, 89
Eco31I	GGTCTC	2 cut(s)	1225, 1738
Eco47I	GGWCC	4 cut(s)	46, 1100, 1491, 1954
Eco53kI	GAGCTC	1 cut(s)	65
Eco57I	CTGAAG	4 cut(s)	219, 318, 384, 1110
Eco72I	CACGTG	1 cut(s)	833
Eco88I	CYCGRG	1 cut(s)	514
Eco91I	GGTNACC	1 cut(s)	1777
EcoICRI	GAGCTC	1 cut(s)	65
EcoNI	CCTNNNNNAGG	1 cut(s)	284
EcoO109I	RGGNCCY	3 cut(s)	46, 85, 1491
EcoO65I	GGTNACC	1 cut(s)	1777
EcoRII	CCWGG	5 cut(s)	42, 728, 1487, 1495, 1739
EcoT38I	GRGCYC	2 cut(s)	67, 89
FalI	AAGNNNNNCTT	4 cut(s)	264, 296, 295, 327
FaqI	GGGAC	5 cut(s)	32, 1398, 1477, 1585, 1922
FauI	CCCGC	2 cut(s)	96, 1947
FbaI	TGATCA	1 cut(s)	283
Fnu4HI	GCNGC	3 cut(s)	212, 1107, 1968
FokI	GGATG	6 cut(s)	122, 310, 853, 1277, 1301, 1354
FriOI	GRGCYC	2 cut(s)	67, 89
Fsp4HI	GCNGC	3 cut(s)	212, 1107, 1968
GlaI	GCGC	2 cut(s)	1647, 1814
GluI	GCNGC	3 cut(s)	212, 1107, 1968
GsaI	CCCAGC	2 cut(s)	438, 2021
GsuI	CTGGAG	1 cut(s)	169
HaeII	RGCGCY	1 cut(s)	1649
HaeIII	GGCC	5 cut(s)	87, 114, 472, 823, 843
HapII	CCGG	3 cut(s)	515, 1021, 2027
HgaI	GACGC	2 cut(s)	428, 1721
HhaI	GCGC	2 cut(s)	1648, 1815
Hin1I	GRCGYC	1 cut(s)	439
Hin6I	GCGC	2 cut(s)	1646, 1813
HinP1I	GCGC	2 cut(s)	1646, 1813
HincII	GTYRAC	1 cut(s)	1018
HindII	GTYRAC	1 cut(s)	1018
HinfI	GANTC	7 cut(s)	509, 527, 886, 1163, 1385, 1514, 1637
HpaII	CCGG	3 cut(s)	515, 1021, 2027
HphI	GGTGA	4 cut(s)	820, 1068, 1070, 1789
Hpy166II	GTNNAC	3 cut(s)	1018, 1864, 1894
Hpy188III	TCNNGA	3 cut(s)	1391, 1483, 1661
Hpy8I	GTNNAC	3 cut(s)	1018, 1864, 1894
Hpy99I	CGWCG	1 cut(s)	1737
HpyAV	CCTTC	9 cut(s)	194, 337, 805, 1436, 1464, 1553, 1800, 1864, 1917
HpyCH4III	ACNGT	7 cut(s)	377, 385, 864, 971, 1237, 1258, 1379
HpyCH4IV	ACGT	3 cut(s)	832, 985, 1860
HpyF10VI	GCNNNNNNNGC	8 cut(s)	146, 1274, 1639, 1652, 1720, 1729, 1939, 2027
HpyF3I	CTNAG	9 cut(s)	447, 1158, 1222, 1283, 1581, 1710, 1759, 1888, 1914
HpySE526I	ACGT	3 cut(s)	832, 985, 1860
Hsp92I	GRCGYC	1 cut(s)	439
HspAI	GCGC	2 cut(s)	1646, 1813
KroI	GCCGGC	1 cut(s)	2026
KroNI	GCCGGC	1 cut(s)	2028
Ksp22I	TGATCA	1 cut(s)	283
Kzo9I	GATC	7 cut(s)	71, 283, 593, 628, 703, 977, 1715
LmnI	GCTCC	4 cut(s)	70, 1405, 1675, 1945
Lsp1109I	GCAGC	2 cut(s)	223, 1954
LweI	GCATC	2 cut(s)	1154, 1255
MabI	ACCWGGT	1 cut(s)	1487
MaeII	ACGT	3 cut(s)	832, 985, 1860
MaeIII	GTNAC	5 cut(s)	858, 986, 1033, 1483, 1777
MalI	GATC	7 cut(s)	73, 285, 595, 630, 705, 979, 1717
MboI	GATC	7 cut(s)	71, 283, 593, 628, 703, 977, 1715
MboII	GAAGA	6 cut(s)	22, 25, 284, 311, 613, 1261
MflI	RGATCY	4 cut(s)	593, 628, 703, 977
MhlI	GDGCHC	2 cut(s)	67, 89
MlsI	TGGCCA	1 cut(s)	114
MluNI	TGGCCA	1 cut(s)	114
MlyI	GAGTC	4 cut(s)	503, 536, 880, 1508
MmeI	TCCRAC	4 cut(s)	656, 817, 1282, 1383
Mox20I	TGGCCA	1 cut(s)	114
MroNI	GCCGGC	1 cut(s)	2026
MscI	TGGCCA	1 cut(s)	114
MseI	TTAA	5 cut(s)	33, 234, 792, 1295, 1821
MslI	CAYNNNNRTG	3 cut(s)	738, 1435, 1462
Msp20I	TGGCCA	1 cut(s)	114
MspI	CCGG	3 cut(s)	515, 1021, 2027
MspR9I	CCNGG	7 cut(s)	44, 515, 516, 730, 1489, 1497, 1741
Mva1269I	GAATGC	3 cut(s)	1279, 1846, 2030
MvaI	CCWGG	5 cut(s)	44, 730, 1489, 1497, 1741
MvnI	CGCG	1 cut(s)	1815
MwoI	GCNNNNNNNGC	8 cut(s)	146, 1274, 1639, 1652, 1720, 1729, 1939, 2027
NaeI	GCCGGC	1 cut(s)	2028
NciI	CCSGG	2 cut(s)	515, 516
NdeII	GATC	7 cut(s)	71, 283, 593, 628, 703, 977, 1715
NgoMIV	GCCGGC	1 cut(s)	2026
NmuCI	GTSAC	4 cut(s)	986, 1033, 1483, 1777
NspI	RCATGY	2 cut(s)	371, 647
PaeI	GCATGC	2 cut(s)	371, 647
PceI	AGGCCT	1 cut(s)	823
PctI	GAATGC	3 cut(s)	1279, 1846, 2030
PdiI	GCCGGC	1 cut(s)	2028
PfeI	GAWTC	3 cut(s)	1163, 1385, 1637
PflFI	GACNNNGTC	1 cut(s)	1489
PflMI	CCANNNNNTGG	2 cut(s)	836, 876
PkrI	GCNGC	3 cut(s)	213, 1108, 1969
PleI	GAGTC	4 cut(s)	503, 535, 880, 1508
PmaCI	CACGTG	1 cut(s)	833
PmlI	CACGTG	1 cut(s)	833
PpsI	GAGTC	4 cut(s)	503, 535, 880, 1508
Ppu21I	YACGTR	2 cut(s)	833, 1861
PpuMI	RGGWCCY	2 cut(s)	46, 1491
PsiI	TTATAA	2 cut(s)	353, 999
Psp124BI	GAGCTC	1 cut(s)	67
Psp5II	RGGWCCY	2 cut(s)	46, 1491
Psp6I	CCWGG	5 cut(s)	42, 728, 1487, 1495, 1739
PspCI	CACGTG	1 cut(s)	833
PspEI	GGTNACC	1 cut(s)	1777
PspFI	CCCAGC	2 cut(s)	434, 2017
PspGI	CCWGG	5 cut(s)	42, 728, 1487, 1495, 1739
PspOMI	GGGCCC	1 cut(s)	85
PspPI	GGNCC	7 cut(s)	46, 85, 86, 471, 1100, 1491, 1954
PspPPI	RGGWCCY	2 cut(s)	46, 1491
PstNI	CAGNNNCTG	1 cut(s)	1229
PsuI	RGATCY	4 cut(s)	593, 628, 703, 977
PsyI	GACNNNGTC	1 cut(s)	1489
RsaI	GTAC	5 cut(s)	564, 875, 1308, 1479, 1979
RsaNI	GTAC	5 cut(s)	563, 874, 1307, 1478, 1978
RseI	CAYNNNNRTG	3 cut(s)	738, 1435, 1462
SacI	GAGCTC	1 cut(s)	67
SaqAI	TTAA	5 cut(s)	33, 234, 792, 1295, 1821
SatI	GCNGC	3 cut(s)	212, 1107, 1968
Sau3AI	GATC	7 cut(s)	71, 283, 593, 628, 703, 977, 1715
Sau96I	GGNCC	7 cut(s)	46, 85, 86, 471, 1100, 1491, 1954
ScaI	AGTACT	2 cut(s)	875, 1308
SchI	GAGTC	4 cut(s)	503, 536, 880, 1508
ScrFI	CCNGG	7 cut(s)	44, 515, 516, 730, 1489, 1497, 1741
SduI	GDGCHC	2 cut(s)	67, 89
SexAI	ACCWGGT	1 cut(s)	1487
SfaNI	GCATC	2 cut(s)	1154, 1255
SfcI	CTRYAG	3 cut(s)	817, 913, 1339
SinI	GGWCC	4 cut(s)	46, 1100, 1491, 1954
SmaI	CCCGGG	1 cut(s)	516
SmiMI	CAYNNNNRTG	3 cut(s)	738, 1435, 1462
SpeI	ACTAGT	1 cut(s)	1012
SphI	GCATGC	2 cut(s)	371, 647
SseBI	AGGCCT	1 cut(s)	823
SsiI	CCGC	5 cut(s)	89, 365, 1107, 1782, 1940
SspI	AATATT	1 cut(s)	488
SstI	GAGCTC	1 cut(s)	67
StuI	AGGCCT	1 cut(s)	823
StyD4I	CCNGG	7 cut(s)	42, 513, 514, 728, 1487, 1495, 1739
TaaI	ACNGT	7 cut(s)	377, 385, 864, 971, 1237, 1258, 1379
TaiI	ACGT	3 cut(s)	835, 988, 1863
TaqI	TCGA	3 cut(s)	1735, 1767, 1852
TaqII	GACCGA	2 cut(s)	1634, 1971
TatI	WGTACW	4 cut(s)	562, 873, 1306, 1477
TauI	GCSGC	1 cut(s)	1109
TfiI	GAWTC	3 cut(s)	1163, 1385, 1637
Tru1I	TTAA	5 cut(s)	33, 234, 792, 1295, 1821
Tru9I	TTAA	5 cut(s)	33, 234, 792, 1295, 1821
TscAI	CASTG	5 cut(s)	127, 382, 1275, 1807, 1903
TseFI	GTSAC	4 cut(s)	986, 1033, 1483, 1777
TseI	GCWGC	2 cut(s)	211, 1967
Tsp45I	GTSAC	4 cut(s)	986, 1033, 1483, 1777
TspDTI	ATGAA	4 cut(s)	267, 1233, 1356, 1602
TspGWI	ACGGA	2 cut(s)	1101, 1128
TspMI	CCCGGG	1 cut(s)	514
TspRI	CASTG	5 cut(s)	127, 382, 1275, 1807, 1903
Tth111I	GACNNNGTC	1 cut(s)	1489
Van91I	CCANNNNNTGG	2 cut(s)	836, 876
VpaK11BI	GGWCC	4 cut(s)	46, 1100, 1491, 1954
XagI	CCTNNNNNAGG	1 cut(s)	284
XapI	RAATTY	5 cut(s)	205, 359, 777, 902, 1362
XceI	RCATGY	2 cut(s)	371, 647
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1378
XmaI	CCCGGG	1 cut(s)	514
ZrmI	AGTACT	2 cut(s)	875, 1308

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.