Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0004907

Physical Location & Seq

Genomic Coordinates Forward (+)

56289936 .. 56301647

Gene Structure 11712 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG338000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1884 bp

ATGGTGTTGAAGAAGAGGCTAGATTTTGGATTTAATGGATTCCAGGTCCCCACCATACCTAGAGCTCCCAGATCAGCTAGAAGGAGGGGCCCACAAAAGAAGTCAGTTGAGGATGGACAAATCTGTGCATTTGAATTACTGGCTTCTATAGCTGGCAAGCTATTGCAGGAGAGTGAAAGTTCATCCGCCTCTAGTCATGCTTCTCAAGGAAATTCTCAGCCTGCCTTTGGTAAAGATGTTAAGCAGGAAATACAAGATGAACACAAACCTCGTAAAGATGAATGTCTAGATCATGGCTGCTCTGAAGAGAGTGTTTCTCTAGAGCTGACCTCAAAAAGCATTGATCGGAAGTGTACTCCAAAAGAATTTCTGCATGCTGAGAGTGATACGGCTTTGGAACGTGCTTCAATTATTACAAATTCCGGCAGCTCAGAGAAAGTTGCTTGTCAGACGAAGTCTGTAATTCGCAGTAGCAAGCCCACACTTCACAATTATTCTGGTAAATTAGGGAGAGGTTCCCCAGGTATTGGGGAGTCCTCTTATGGTAATTTAGGAATTCCAAAAGACAGTGAGGGATTAGAAACTGGAGGTTGTAATAGGGCTAACACATGCAGTTCCAAGGATCCAATGGAATTGCATGCAGAGTATCCTGCAACTGTCAATGGAGACAATAATGACAAATTGTCATTGTACAGGGATCTTATTCCTAATGCTTCTTTTTCCAGGCATAGGAATGATACTGAATTAGGTATTAGAGATGATGACGAAAACTTTTCTAGGTGCAATAAACTCAGCACCAAGGTAAAGGTCTTTGGGCCTCCATCACGTATTGGAGACCGAAGAATAAGGAAGTTACTGACATCCAAGTATTGGAAGGTGGCTCCAAAACTGAGGGAATGTGATAACCTCAGATATGATGGAGGAGTAAAACCTACTTATCACAAGAGGAAAATCTTTTACAATCGCGAACGATCTCAACGTGACACTCTTTGTAAGAGGAGGAAAATGGTTGAACGAAGCTCAGTAGTGACTTCTGATGGAGGGTTCAGCGGTGAAAGTGTTTCTTATTCACCTGAGAAGGGCATGAATGGAGACAAAAGTGTTCCAGCTGCAAATGGGGTGTCTTCTTCAGTCATAGGCCCTCAAGCTTCTCTCCACTCCAAGGAATCTCATGTGAAATTCAGAATAAAATCCTTTAGGGTACCGGAGCTTTTTATTGAGGTGCCAGAAACTGAAACTGTCGGTTCCTTGAAGAGGACAGTCATGGAGGCAGTAAATGCCATACTTAATGGTGACTTAAGTGTTGGGGTGCTTGTTCAAGGTAAAAAGGTTAGAGATGACAACAGAACTCTGCTGCAGACTGGAATTTCTTGTAAAGACAATCTGGATTCTCTGGGTTTTACATTGGAGCCTAGTCCTGTGCAAGCTCCTCCATCTTTGTGTCCTGGATATCCTCCTCCATTGTCATGCGAGGCATCGGTACCGTTGCCCAGGTCCCCAAGCACACCTTTACTGGATTCAGGGATTTCTGATGCGATATCTGATCCCCCTCCTCTGACCAATTCAGGCAGTCTTGCTGAAAGTAACCATGAATCGGTTTCCTCTCTTATTGATCCATTAAGCAACAAAGCCATGCCAGAATGCCAGGCAATAGTTGCTCTTCCTGACGTGAACATGGAGCCACTAGCTGCGGTTCCTGTGAACCAGAAATCTAAGCGATCTGAGCTTGTACAGCGTCGAACCAGGAGGCCATTCTCAGTGTCAGAAGTAGAAGCATTGGTGCAGGCTGTTGAGGAGCTCGGGACTGGAAGGTGGCGTGATGTTAAATTGTGTGCATTTGAGAATGCAGATCATCGAACTTATGTGGACTTGAAGGTCGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000723 GO:0000781 GO:0000782 GO:0000783 GO:0000784 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003691 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008301 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016043 GO:0031627 GO:0031974 GO:0031981 GO:0032200 GO:0032991 GO:0032993 GO:0033993 GO:0034641 GO:0042162 GO:0042221 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0060249 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0097305 GO:0098687 GO:1901360 GO:1901363 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

627

Amino Acids

68.61

Weight (kDa)

8.65

Isoelectric Point (pI)

52.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ubiquitin_TPR1	PF23603	391 - 459	8.5e-38	Telomere repeat-binding protein 1-like, ubiquitin-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004907)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12560 AT3G12560 AT5G13820 AT5G13820
fragaria_vesca	FvH4_7g22710 FvH4_7g22710 FvH4_7g22710 FvH4_7g22710 FvH4_7g22710 FvH4_7g22710 FvH4_7g22710 FvH4_7g22710
malus_domestica	MD01G1135700.v1.1 MD07G1200400.v1.1
prunus_persica	Prupe.2G237100_v2.0.a1
pyrus_communis	pycom01g15650 pycom07g18730 pycom07g18740
rosa_chinensis	RchiOBHm_Chr1g0367801
rosa_laevigata	RLG00000027262
rosa_multiflora	Rmu_co8480775.1_g000001 Rmu_ssc0000395.1_g000024
rosa_roxburghii	Rroxscaffold_4G00289210
rosa_rugosa	Rorug01G0336700 Rorug01G0336800
rosa_samantha	Rh1AG343900 Rh1BG305800 Rh1CG321400 Rh1DG338000
rosa_wichuraiana	Rw1G030610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1874
Acc65I	GGTACC	2 cut(s)	1201, 1480
AccB1I	GGYRCC	3 cut(s)	1201, 1222, 1480
AccB7I	CCANNNNNTGG	2 cut(s)	527, 870
AccII	CGCG	1 cut(s)	966
AciI	CCGC	3 cut(s)	186, 1050, 1691
AclWI	GGATC	5 cut(s)	617, 630, 705, 1538, 1607
AcsI	RAATTY	6 cut(s)	211, 365, 418, 555, 1178, 1365
AcuI	CTGAAG	2 cut(s)	324, 1113
AfaI	GTAC	5 cut(s)	355, 692, 1203, 1482, 1731
AfiI	CCNNNNNNNGG	8 cut(s)	227, 527, 729, 870, 1079, 1162, 1254, 1594
AflII	CTTAAG	1 cut(s)	1297
AgsI	TTSAA	7 cut(s)	10, 134, 408, 1013, 1252, 1319, 1873
AhdI	GACNNNNNGTC	1 cut(s)	682
AjiI	CACGTC	1 cut(s)	1669
AjnI	CCWGG	7 cut(s)	42, 520, 722, 1444, 1490, 1644, 1742
Alw21I	GWGCWC	2 cut(s)	67, 1800
Alw26I	GTCTC	3 cut(s)	660, 828, 1086
AlwI	GGATC	5 cut(s)	617, 630, 705, 1538, 1607
AlwNI	CAGNNNCTG	1 cut(s)	1232
Ama87I	CYCGRG	1 cut(s)	1799
AoxI	GGCC	4 cut(s)	88, 815, 1138, 1748
ApaI	GGGCCC	1 cut(s)	92
ApeKI	GCWGC	5 cut(s)	297, 426, 1109, 1354, 1688
ApoI	RAATTY	6 cut(s)	211, 365, 418, 555, 1178, 1365
ArsI	GACNNNNNNTTYG	2 cut(s)	1106, 1138
Asp718I	GGTACC	2 cut(s)	1201, 1480
AspS9I	GGNCC	6 cut(s)	46, 88, 89, 815, 1139, 1494
AsuHPI	GGTGA	3 cut(s)	1062, 1064, 1304
AvaI	CYCGRG	1 cut(s)	1799
AvaII	GGWCC	2 cut(s)	46, 1494
BaeGI	GKGCMC	1 cut(s)	92
BamHI	GGATCC	1 cut(s)	622
BanI	GGYRCC	3 cut(s)	1201, 1222, 1480
BanII	GRGCYC	3 cut(s)	67, 92, 1800
BbsI	GAAGAC	1 cut(s)	1116
Bbv12I	GWGCWC	2 cut(s)	67, 1800
BbvI	GCAGC	5 cut(s)	284, 438, 1096, 1341, 1675
BccI	CCATC	5 cut(s)	107, 829, 911, 1031, 1441
BceAI	ACGGC	1 cut(s)	405
BciT130I	CCWGG	7 cut(s)	44, 522, 724, 1446, 1492, 1646, 1744
BciVI	GTATCC	1 cut(s)	657
BcoDI	GTCTC	3 cut(s)	660, 828, 1086
BfaI	CTAG	9 cut(s)	20, 60, 78, 192, 287, 320, 777, 1413, 1685
BfmI	CTRYAG	2 cut(s)	147, 1355
BfrI	CTTAAG	1 cut(s)	1297
BfuI	GTATCC	1 cut(s)	657
BisI	GCNGC	5 cut(s)	298, 427, 1110, 1355, 1689
BlsI	GCNGC	5 cut(s)	299, 428, 1111, 1356, 1690
Bme1390I	CCNGG	7 cut(s)	44, 522, 724, 1446, 1492, 1646, 1744
Bme18I	GGWCC	2 cut(s)	46, 1494
BmeRI	GACNNNNNGTC	1 cut(s)	682
BmeT110I	CYCGRG	1 cut(s)	1799
BmgBI	CACGTC	1 cut(s)	1669
BmgT120I	GGNCC	6 cut(s)	46, 88, 89, 815, 1139, 1494
BmrFI	CCNGG	7 cut(s)	44, 522, 724, 1446, 1492, 1646, 1744
BmsI	GCATC	2 cut(s)	1484, 1522
BpiI	GAAGAC	1 cut(s)	1116
BplI	GAGNNNNNCTC	4 cut(s)	301, 333, 314, 346
BpmI	CTGGAG	1 cut(s)	606
BpuEI	CTTGAG	2 cut(s)	189, 1128
BsaAI	YACGTR	1 cut(s)	827
BsaI	GGTCTC	1 cut(s)	828
BsaJI	CCNNGG	5 cut(s)	520, 618, 798, 1161, 1490
BsaWI	WCCGGW	1 cut(s)	1204
Bsc4I	CCNNNNNNNGG	8 cut(s)	227, 527, 729, 870, 1079, 1162, 1254, 1594
Bse1I	ACTGG	5 cut(s)	144, 589, 1366, 1518, 1810
BseBI	CCWGG	7 cut(s)	44, 522, 724, 1446, 1492, 1646, 1744
BseDI	CCNNGG	5 cut(s)	520, 618, 798, 1161, 1490
BseGI	GGATG	3 cut(s)	118, 182, 860
BseLI	CCNNNNNNNGG	8 cut(s)	227, 527, 729, 870, 1079, 1162, 1254, 1594
BseNI	ACTGG	5 cut(s)	144, 589, 1366, 1518, 1810
BseRI	GAGGAG	6 cut(s)	936, 1012, 1419, 1446, 1542, 1808
BseSI	GKGCMC	1 cut(s)	92
BseXI	GCAGC	5 cut(s)	284, 438, 1096, 1341, 1675
BsgI	GTGCAG	1 cut(s)	1802
Bsh1236I	CGCG	1 cut(s)	966
BshFI	GGCC	4 cut(s)	90, 817, 1140, 1750
BshNI	GGYRCC	3 cut(s)	1201, 1222, 1480
BsiHKAI	GWGCWC	2 cut(s)	67, 1800
BsiHKCI	CYCGRG	1 cut(s)	1799
BsiSI	CCGG	2 cut(s)	423, 1205
BslFI	GGGAC	3 cut(s)	32, 1480, 1816
BslI	CCNNNNNNNGG	8 cut(s)	227, 527, 729, 870, 1079, 1162, 1254, 1594
BsmAI	GTCTC	3 cut(s)	660, 828, 1086
BsmFI	GGGAC	3 cut(s)	32, 1480, 1816
BsmI	GAATGC	2 cut(s)	1646, 1849
BsnI	GGCC	4 cut(s)	90, 817, 1140, 1750
Bso31I	GGTCTC	1 cut(s)	828
BsoBI	CYCGRG	1 cut(s)	1799
Bsp120I	GGGCCC	1 cut(s)	88
Bsp1286I	GDGCHC	3 cut(s)	67, 92, 1800
Bsp1407I	TGTACA	2 cut(s)	690, 1729
Bsp68I	TCGCGA	1 cut(s)	966
BspACI	CCGC	3 cut(s)	186, 1050, 1691
BspANI	GGCC	4 cut(s)	90, 817, 1140, 1750
BspFNI	CGCG	1 cut(s)	966
BspMAI	CTGCAG	1 cut(s)	1359
BspPI	GGATC	5 cut(s)	617, 630, 705, 1538, 1607
BspQI	GCTCTTC	1 cut(s)	1665
BspT107I	GGYRCC	3 cut(s)	1201, 1222, 1480
BspTI	CTTAAG	1 cut(s)	1297
BspTNI	GGTCTC	1 cut(s)	828
BsrGI	TGTACA	2 cut(s)	690, 1729
BsrI	ACTGG	5 cut(s)	144, 589, 1366, 1518, 1810
BssECI	CCNNGG	5 cut(s)	520, 618, 798, 1161, 1490
BssT1I	CCWWGG	3 cut(s)	618, 798, 1161
Bst2UI	CCWGG	7 cut(s)	44, 522, 724, 1446, 1492, 1646, 1744
Bst4CI	ACNGT	5 cut(s)	569, 658, 1240, 1261, 1485
Bst6I	CTCTTC	4 cut(s)	8, 300, 1247, 1665
BstAFI	CTTAAG	1 cut(s)	1297
BstAPI	GCANNNNNTGC	2 cut(s)	1277, 1655
BstAUI	TGTACA	2 cut(s)	690, 1729
BstBAI	YACGTR	1 cut(s)	827
BstC8I	GCNNGC	8 cut(s)	154, 158, 222, 375, 476, 639, 1425, 1785
BstENI	CCTNNNNNAGG	1 cut(s)	1252
BstF5I	GGATG	3 cut(s)	118, 182, 860
BstFNI	CGCG	1 cut(s)	966
BstMAI	GTCTC	3 cut(s)	660, 828, 1086
BstMWI	GCNNNNNNNGC	5 cut(s)	149, 1277, 1655, 1723, 1732
BstNI	CCWGG	7 cut(s)	44, 522, 724, 1446, 1492, 1646, 1744
BstNSI	RCATGY	3 cut(s)	377, 612, 641
BstSCI	CCNGG	7 cut(s)	42, 520, 722, 1444, 1490, 1644, 1742
BstSFI	CTRYAG	2 cut(s)	147, 1355
BstSLI	GKGCMC	1 cut(s)	92
BstUI	CGCG	1 cut(s)	966
BstV1I	GCAGC	5 cut(s)	284, 438, 1096, 1341, 1675
BstV2I	GAAGAC	1 cut(s)	1116
BstX2I	RGATCY	2 cut(s)	622, 697
BstYI	RGATCY	2 cut(s)	622, 697
BsuI	GTATCC	1 cut(s)	657
BsuRI	GGCC	4 cut(s)	90, 817, 1140, 1750
BtrI	CACGTC	1 cut(s)	1669
BtsCI	GGATG	3 cut(s)	118, 182, 860
BtsIMutI	CAGTG	2 cut(s)	574, 1764
BtuMI	TCGCGA	1 cut(s)	966
Cac8I	GCNNGC	8 cut(s)	154, 158, 222, 375, 476, 639, 1425, 1785
CaiI	CAGNNNCTG	1 cut(s)	1232
Cfr13I	GGNCC	6 cut(s)	46, 88, 89, 815, 1139, 1494
CseI	GACGC	1 cut(s)	1724
Csp6I	GTAC	5 cut(s)	354, 691, 1202, 1481, 1730
CviQI	GTAC	5 cut(s)	354, 691, 1202, 1481, 1730
DrdI	GACNNNNNNGTC	1 cut(s)	1874
DriI	GACNNNNNGTC	1 cut(s)	682
DseDI	GACNNNNNNGTC	1 cut(s)	1874
Eam1104I	CTCTTC	4 cut(s)	8, 300, 1247, 1665
Eam1105I	GACNNNNNGTC	1 cut(s)	682
EarI	CTCTTC	4 cut(s)	8, 300, 1247, 1665
EciI	GGCGGA	1 cut(s)	175
Ecl136II	GAGCTC	2 cut(s)	65, 1798
Eco130I	CCWWGG	3 cut(s)	618, 798, 1161
Eco24I	GRGCYC	3 cut(s)	67, 92, 1800
Eco31I	GGTCTC	1 cut(s)	828
Eco32I	GATATC	2 cut(s)	1451, 1539
Eco47I	GGWCC	2 cut(s)	46, 1494
Eco53kI	GAGCTC	2 cut(s)	65, 1798
Eco57I	CTGAAG	2 cut(s)	324, 1113
Eco88I	CYCGRG	1 cut(s)	1799
EcoICRI	GAGCTC	2 cut(s)	65, 1798
EcoNI	CCTNNNNNAGG	1 cut(s)	1252
EcoO109I	RGGNCCY	4 cut(s)	46, 88, 1139, 1494
EcoRI	GAATTC	1 cut(s)	555
EcoRII	CCWGG	7 cut(s)	42, 520, 722, 1444, 1490, 1644, 1742
EcoRV	GATATC	2 cut(s)	1451, 1539
EcoT14I	CCWWGG	3 cut(s)	618, 798, 1161
EcoT38I	GRGCYC	3 cut(s)	67, 92, 1800
ErhI	CCWWGG	3 cut(s)	618, 798, 1161
FalI	AAGNNNNNCTT	4 cut(s)	1048, 1080, 1492, 1524
FaqI	GGGAC	3 cut(s)	32, 1480, 1816
Fnu4HI	GCNGC	5 cut(s)	298, 427, 1110, 1355, 1689
FokI	GGATG	3 cut(s)	125, 169, 847
FriOI	GRGCYC	3 cut(s)	67, 92, 1800
Fsp4HI	GCNGC	5 cut(s)	298, 427, 1110, 1355, 1689
FspBI	CTAG	9 cut(s)	20, 60, 78, 192, 287, 320, 777, 1413, 1685
GluI	GCNGC	5 cut(s)	298, 427, 1110, 1355, 1689
GsuI	CTGGAG	1 cut(s)	606
HaeIII	GGCC	4 cut(s)	90, 817, 1140, 1750
HapII	CCGG	2 cut(s)	423, 1205
HgaI	GACGC	1 cut(s)	1724
HindIII	AAGCTT	1 cut(s)	1146
HinfI	GANTC	6 cut(s)	39, 533, 1166, 1388, 1517, 1592
HpaII	CCGG	2 cut(s)	423, 1205
HphI	GGTGA	3 cut(s)	1062, 1064, 1304
Hpy166II	GTNNAC	4 cut(s)	354, 1672, 1702, 1867
Hpy188III	TCNNGA	6 cut(s)	287, 320, 965, 1385, 1664, 1801
Hpy8I	GTNNAC	4 cut(s)	354, 1672, 1702, 1867
Hpy99I	CGWCG	1 cut(s)	1740
HpyAV	CCTTC	5 cut(s)	75, 868, 1072, 1803, 1867
HpyCH4III	ACNGT	5 cut(s)	569, 658, 1240, 1261, 1485
HpyCH4IV	ACGT	4 cut(s)	400, 826, 979, 1668
HpyF10VI	GCNNNNNNNGC	5 cut(s)	149, 1277, 1655, 1723, 1732
HpySE526I	ACGT	4 cut(s)	400, 826, 979, 1668
KpnI	GGTACC	2 cut(s)	1205, 1484
LguI	GCTCTTC	1 cut(s)	1665
LmnI	GCTCC	7 cut(s)	70, 886, 1207, 1408, 1432, 1678, 1795
Lsp1109I	GCAGC	5 cut(s)	284, 438, 1096, 1341, 1675
LweI	GCATC	2 cut(s)	1484, 1522
MaeI	CTAG	9 cut(s)	20, 60, 78, 192, 287, 320, 777, 1413, 1685
MaeII	ACGT	4 cut(s)	400, 826, 979, 1668
MaeIII	GTNAC	5 cut(s)	852, 980, 1027, 1292, 1583
MboII	GAAGA	8 cut(s)	22, 25, 317, 852, 1116, 1119, 1264, 1652
MflI	RGATCY	2 cut(s)	622, 697
MhlI	GDGCHC	3 cut(s)	67, 92, 1800
MlyI	GAGTC	1 cut(s)	542
MseI	TTAA	6 cut(s)	33, 240, 1287, 1298, 1619, 1824
MslI	CAYNNNNRTG	3 cut(s)	732, 1438, 1465
MspA1I	CMGCKG	2 cut(s)	1050, 1109
MspCI	CTTAAG	1 cut(s)	1297
MspI	CCGG	2 cut(s)	423, 1205
MspR9I	CCNGG	7 cut(s)	44, 522, 724, 1446, 1492, 1646, 1744
Mva1269I	GAATGC	2 cut(s)	1646, 1849
MvaI	CCWGG	7 cut(s)	44, 522, 724, 1446, 1492, 1646, 1744
MvnI	CGCG	1 cut(s)	966
MwoI	GCNNNNNNNGC	5 cut(s)	149, 1277, 1655, 1723, 1732
NmuCI	GTSAC	3 cut(s)	980, 1027, 1292
NruI	TCGCGA	1 cut(s)	966
NspI	RCATGY	3 cut(s)	377, 612, 641
PaeI	GCATGC	2 cut(s)	377, 641
PciSI	GCTCTTC	1 cut(s)	1665
PcsI	WCGNNNNNNNCGW	1 cut(s)	976
PctI	GAATGC	2 cut(s)	1646, 1849
PfeI	GAWTC	5 cut(s)	39, 1166, 1388, 1517, 1592
PflFI	GACNNNGTC	1 cut(s)	454
PflMI	CCANNNNNTGG	2 cut(s)	527, 870
PfoI	TCCNGGA	1 cut(s)	1444
PkrI	GCNGC	5 cut(s)	299, 428, 1111, 1356, 1690
PleI	GAGTC	1 cut(s)	541
PpsI	GAGTC	1 cut(s)	541
Ppu21I	YACGTR	1 cut(s)	827
PpuMI	RGGWCCY	2 cut(s)	46, 1494
Psp124BI	GAGCTC	2 cut(s)	67, 1800
Psp5II	RGGWCCY	2 cut(s)	46, 1494
Psp6I	CCWGG	7 cut(s)	42, 520, 722, 1444, 1490, 1644, 1742
PspGI	CCWGG	7 cut(s)	42, 520, 722, 1444, 1490, 1644, 1742
PspOMI	GGGCCC	1 cut(s)	88
PspPI	GGNCC	6 cut(s)	46, 88, 89, 815, 1139, 1494
PspPPI	RGGWCCY	2 cut(s)	46, 1494
PstI	CTGCAG	1 cut(s)	1359
PstNI	CAGNNNCTG	1 cut(s)	1232
PsuI	RGATCY	2 cut(s)	622, 697
PsyI	GACNNNGTC	1 cut(s)	454
PvuII	CAGCTG	1 cut(s)	1109
RruI	TCGCGA	1 cut(s)	966
RsaI	GTAC	5 cut(s)	355, 692, 1203, 1482, 1731
RsaNI	GTAC	5 cut(s)	354, 691, 1202, 1481, 1730
RseI	CAYNNNNRTG	3 cut(s)	732, 1438, 1465
SacI	GAGCTC	2 cut(s)	67, 1800
SapI	GCTCTTC	1 cut(s)	1665
SaqAI	TTAA	6 cut(s)	33, 240, 1287, 1298, 1619, 1824
SatI	GCNGC	5 cut(s)	298, 427, 1110, 1355, 1689
Sau96I	GGNCC	6 cut(s)	46, 88, 89, 815, 1139, 1494
SchI	GAGTC	1 cut(s)	542
ScrFI	CCNGG	7 cut(s)	44, 522, 724, 1446, 1492, 1646, 1744
SduI	GDGCHC	3 cut(s)	67, 92, 1800
SfaNI	GCATC	2 cut(s)	1484, 1522
SfcI	CTRYAG	2 cut(s)	147, 1355
SinI	GGWCC	2 cut(s)	46, 1494
SmiMI	CAYNNNNRTG	3 cut(s)	732, 1438, 1465
SmlI	CTYRAG	3 cut(s)	204, 1143, 1297
SmoI	CTYRAG	3 cut(s)	204, 1143, 1297
SphI	GCATGC	2 cut(s)	377, 641
SsiI	CCGC	3 cut(s)	186, 1050, 1691
SspMI	CTAG	9 cut(s)	20, 60, 78, 192, 287, 320, 777, 1413, 1685
SstI	GAGCTC	2 cut(s)	67, 1800
StyD4I	CCNGG	7 cut(s)	42, 520, 722, 1444, 1490, 1644, 1742
StyI	CCWWGG	3 cut(s)	618, 798, 1161
TaaI	ACNGT	5 cut(s)	569, 658, 1240, 1261, 1485
TaiI	ACGT	4 cut(s)	403, 829, 982, 1671
TaqI	TCGA	3 cut(s)	1738, 1855, 1878
TaqII	GACCGA	1 cut(s)	852
TatI	WGTACW	3 cut(s)	353, 690, 1729
TfiI	GAWTC	5 cut(s)	39, 1166, 1388, 1517, 1592
Tru1I	TTAA	6 cut(s)	33, 240, 1287, 1298, 1619, 1824
Tru9I	TTAA	6 cut(s)	33, 240, 1287, 1298, 1619, 1824
TscAI	CASTG	2 cut(s)	574, 1764
TseFI	GTSAC	3 cut(s)	980, 1027, 1292
TseI	GCWGC	5 cut(s)	297, 426, 1109, 1354, 1688
Tsp45I	GTSAC	3 cut(s)	980, 1027, 1292
TspDTI	ATGAA	5 cut(s)	171, 273, 294, 1100, 1605
TspRI	CASTG	2 cut(s)	574, 1764
Tth111I	GACNNNGTC	1 cut(s)	454
Van91I	CCANNNNNTGG	2 cut(s)	527, 870
Vha464I	CTTAAG	1 cut(s)	1297
VpaK11BI	GGWCC	2 cut(s)	46, 1494
XagI	CCTNNNNNAGG	1 cut(s)	1252
XapI	RAATTY	6 cut(s)	211, 365, 418, 555, 1178, 1365
XbaI	TCTAGA	2 cut(s)	286, 319
XceI	RCATGY	3 cut(s)	377, 612, 641
XcmI	CCANNNNNNNNNTGG	1 cut(s)	625
XspI	CTAG	9 cut(s)	20, 60, 78, 192, 287, 320, 777, 1413, 1685

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.