Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004907

Physical Location & Seq

Genomic Coordinates Forward (+)

4460840 .. 4464737

Gene Structure 3898 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G13820.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1923 bp

ATGGTGGTCAAAAGGAAGTTAAATTGTGGTGGCTCTAATGGTTTTGATTTCCCCAATATTCCCAAGGCTCCTCGTTCAAGCAGGAGGAAGGTCTCAGGTAAGAGATCTGATGATGAAAGTGAGATCTGTGCAATTGATTTGCTAGCTTCTCTTGCTGGAAAGTTGTTGGAAGAAAGTGAAAGTTCCTCAACGTCTACCTATGCATCTGAAGCTGATAATCTTGATCATTTGGGTGGACTGATTAAGCAAGAACTTGAAGATGGCTATACTACTAAGCCTTGTAAATCCGAGTTTTTCGATCCAGGAAACCCTGCTTCAAAGTCTACTAGTGAAAATACTAGCGTGACTTGTTTGCCATTTTCGTCTTTCGAAAATGATTGCATTTTGGAGCAAACACCGGTTTCTGATTGTAAGAGGGCATCTGGTTTGAAGTCCCTGGTAGGGAGCATCACTGAGGAGACATGTGTTGTTAATGAGGATGCCGGATCTGAACAAGGTGCTAATACTTTCAGCTTAAAGGATCCAAGTCAATTACATTCGCAGTCTCCAGAATCGGTCCTTCTGGATGGCGATGTGAAATTAGCACCATGCACGGATCAAGTCCCTAATGATTCTTTTAAAGGATATAGGAATCATTCTAAGTTAGTTTGCAGAGATGATGACGAAAACTATTGTAAGTATTATAAATTTAGTGACAAATGTAAGTCATATAGGCCTCTCTCCCGGGTTGGCAATAGAAGAATAATGCAGTCGGTGAGAGCAATCTCCAAGTTGAAGTGTTTTGAAGACACTAGAACAGATGGTCGTTTGAAGGCTCTCTACCGCAAGAGAAAATTATGTTATGGTTACAACCCATGGAAGCGTGAGACCATTCATAGGAAGAGAAGATTGTCTGACAAAGGTTTGGTCGTAAATTATGATGGTGGGCTCAGTAGTGAAAGTGTTTCCAATTCACCTGAAAAGGGAGAATCAGAAAATGGTGATTTCTCTGCTGCAAAAATAGGTCTTCTTTCGAAAGACTCCCGTGTAAAGTTCAGCATCAAGTCCCTTAGGATTCCGGAGCTTGTAATTGAAGTTCCAGAAACAGCAACAGTAGGCTTACTGAAGAGGACGGTGAAGGAGGCGGTTACTGCTTTACTCGGTGGTGGAATACGTATTGGGGTGTTAGTCCAAGGGAAAAAAGTTAGAGATGACAACAACACTCTATCACAGACTGGTCTTTCGTGTAGAGAAAATCTTGGCAACCTTGGCTTCACCTTAGAGCCTGGTTTGGAAACACTGCCTGTACCTCTTTGTTCTGAAACTCCTGTCCTTTCTCTGCCAACTGACTCTACAAAGTTGTCAGAAAGGTCCGCAGCTTCTCCAGCGTTAGAGACTGGAATTCCTCTCCCTCCCCAAGATGAAGATTACTTGATTAATTTGGGAAATAGTGTGGAGAACAATGATGAATTAGTCCCACATCTGAGTGACATACCAGCTGATGAACAACCTTCATCAGATTCAAGAGCGCTGGTTCCAGTTTTGGCCTTGGAATCCGACGCTCTTGCACTTGTTCCAGTTAACGAGAAACCTAAGCGTACAGAGCTTTCACAACGCAGAACCAGGAGACCATTCTCTGTTACAGAGGTAGAAGCTCTAGTAAGCGCAGTTGAAGAAGTTGGGACTGGAAGATGGCGTGATGTGAAGTTGCGTTCTTTTGAGAATGCAAGTCATCGAACCTATGTGGACTTGAAGGACAAATGGAAAACGTTGGTTCACACAGCAAGTATATCACCACAGCAACGAAGAGGAGAACCAGTGCCTCAAGAACTGCTAGACAGAGTCTTAGGAGCACATAGGTACTGGACACAGCACCAAATGAAACAGAACGGGAAACATCAGGTGGCTACAACAATGGTGGTTGAAGCAGGTTCGTCCATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000723 GO:0000781 GO:0000782 GO:0000783 GO:0000784 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003691 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0019219 GO:0019222 GO:0031323 GO:0031627 GO:0031974 GO:0031981 GO:0032200 GO:0032204 GO:0032991 GO:0032993 GO:0033043 GO:0033044 GO:0034641 GO:0042162 GO:0042592 GO:0042802 GO:0042803 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0046983 GO:0050789 GO:0050794 GO:0051052 GO:0051128 GO:0051171 GO:0051276 GO:0060249 GO:0060255 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0098687 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

640

Amino Acids

70.48

Weight (kDa)

6.82

Isoelectric Point (pI)

50.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ubiquitin_TPR1	PF23603	342 - 409	6.5e-34	Telomere repeat-binding protein 1-like, ubiquitin-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004907)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12560 AT3G12560 AT5G13820 AT5G13820
fragaria_vesca	FvH4_7g22710 FvH4_7g22710 FvH4_7g22710 FvH4_7g22710 FvH4_7g22710 FvH4_7g22710 FvH4_7g22710 FvH4_7g22710
malus_domestica	MD01G1135700.v1.1 MD07G1200400.v1.1
prunus_persica	Prupe.2G237100_v2.0.a1
pyrus_communis	pycom01g15650 pycom07g18730 pycom07g18740
rosa_chinensis	RchiOBHm_Chr1g0367801
rosa_laevigata	RLG00000027262
rosa_multiflora	Rmu_co8480775.1_g000001 Rmu_ssc0000395.1_g000024
rosa_roxburghii	Rroxscaffold_4G00289210
rosa_rugosa	Rorug01G0336700 Rorug01G0336800
rosa_samantha	Rh1AG343900 Rh1BG305800 Rh1CG321400 Rh1DG338000
rosa_wichuraiana	Rw1G030610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	684
Acc36I	ACCTGC	1 cut(s)	1898
AccI	GTMKAC	2 cut(s)	194, 323
AccIII	TCCGGA	1 cut(s)	1057
AciI	CCGC	3 cut(s)	823, 1124, 1353
AclI	AACGTT	1 cut(s)	1748
AclWI	GGATC	5 cut(s)	293, 493, 515, 528, 603
AcsI	RAATTY	2 cut(s)	686, 1380
AcuI	CTGAAG	2 cut(s)	228, 1124
AfaI	GTAC	3 cut(s)	1287, 1579, 1841
AfeI	AGCGCT	1 cut(s)	1509
AfiI	CCNNNNNNNGG	3 cut(s)	441, 876, 962
AflIII	ACRYGT	1 cut(s)	461
AgeI	ACCGGT	1 cut(s)	397
AhlI	ACTAGT	1 cut(s)	326
AjnI	CCWGG	4 cut(s)	301, 435, 1264, 1601
AluBI	AGCT	8 cut(s)	146, 212, 513, 1063, 1358, 1478, 1585, 1634
AluI	AGCT	8 cut(s)	146, 212, 513, 1063, 1358, 1478, 1585, 1634
Alw21I	GWGCWC	1 cut(s)	1834
Alw26I	GTCTC	6 cut(s)	97, 452, 549, 860, 1367, 1600
AlwI	GGATC	5 cut(s)	293, 493, 515, 528, 603
Ama87I	CYCGRG	1 cut(s)	723
Aor13HI	TCCGGA	1 cut(s)	1057
Aor51HI	AGCGCT	1 cut(s)	1509
AoxI	GGCC	2 cut(s)	713, 1524
ApeKI	GCWGC	2 cut(s)	992, 1355
ApoI	RAATTY	2 cut(s)	686, 1380
ArsI	GACNNNNNNTTYG	4 cut(s)	891, 923, 1204, 1236
AseI	ATTAAT	1 cut(s)	1416
AsiGI	ACCGGT	1 cut(s)	397
AspLEI	GCGC	2 cut(s)	1510, 1646
AspS9I	GGNCC	2 cut(s)	556, 1350
AsuC2I	CCSGG	2 cut(s)	724, 725
AsuHPI	GGTGA	6 cut(s)	766, 945, 992, 1126, 1246, 1764
AsuII	TTCGAA	2 cut(s)	369, 1013
AsuNHI	GCTAGC	1 cut(s)	142
AvaI	CYCGRG	1 cut(s)	723
AvaII	GGWCC	2 cut(s)	556, 1350
AxyI	CCTNAGG	1 cut(s)	1049
BamHI	GGATCC	1 cut(s)	520
BanII	GRGCYC	1 cut(s)	930
BarI	GAAGNNNNNNTAC	2 cut(s)	803, 835
BbsI	GAAGAC	2 cut(s)	792, 998
Bbv12I	GWGCWC	1 cut(s)	1834
BbvI	GCAGC	2 cut(s)	979, 1367
BccI	CCATC	5 cut(s)	254, 560, 794, 914, 1665
BcgI	CGANNNNNNTGC	2 cut(s)	1526, 1560
BciT130I	CCWGG	4 cut(s)	303, 437, 1266, 1603
BclI	TGATCA	1 cut(s)	223
BcnI	CCSGG	2 cut(s)	724, 725
BcoDI	GTCTC	6 cut(s)	97, 452, 549, 860, 1367, 1600
BcuI	ACTAGT	1 cut(s)	326
BfaI	CTAG	6 cut(s)	143, 327, 339, 792, 1637, 1814
BfoI	RGCGCY	1 cut(s)	1511
BfuAI	ACCTGC	1 cut(s)	1898
BglII	AGATCT	2 cut(s)	104, 123
BisI	GCNGC	2 cut(s)	993, 1356
BlsI	GCNGC	2 cut(s)	994, 1357
Bme1390I	CCNGG	6 cut(s)	303, 437, 724, 725, 1266, 1603
Bme18I	GGWCC	2 cut(s)	556, 1350
BmeT110I	CYCGRG	1 cut(s)	723
BmgT120I	GGNCC	2 cut(s)	556, 1350
BmiI	GGNNCC	3 cut(s)	69, 522, 1515
BmrFI	CCNGG	6 cut(s)	303, 437, 724, 725, 1266, 1603
BmsI	GCATC	5 cut(s)	212, 428, 456, 469, 1047
BmtI	GCTAGC	1 cut(s)	146
BpiI	GAAGAC	2 cut(s)	792, 998
BpmI	CTGGAG	2 cut(s)	531, 1347
Bpu10I	CCTNAGC	1 cut(s)	1572
Bpu14I	TTCGAA	2 cut(s)	369, 1013
BpuEI	CTTGAG	1 cut(s)	1788
BpuMI	CCSGG	2 cut(s)	724, 725
BsaAI	YACGTR	1 cut(s)	1154
BsaI	GGTCTC	3 cut(s)	97, 860, 1600
BsaJI	CCNNGG	7 cut(s)	63, 435, 723, 854, 1171, 1246, 1527
BsaWI	WCCGGW	2 cut(s)	397, 1057
BsaXI	ACNNNNNCTCC	2 cut(s)	1782, 1812
Bsc4I	CCNNNNNNNGG	3 cut(s)	441, 876, 962
Bse118I	RCCGGY	1 cut(s)	397
Bse1I	ACTGG	7 cut(s)	1219, 1381, 1517, 1556, 1669, 1796, 1847
Bse21I	CCTNAGG	1 cut(s)	1049
BseAI	TCCGGA	1 cut(s)	1057
BseBI	CCWGG	4 cut(s)	303, 437, 1266, 1603
BseDI	CCNNGG	7 cut(s)	63, 435, 723, 854, 1171, 1246, 1527
BseGI	GGATG	2 cut(s)	484, 571
BseLI	CCNNNNNNNGG	3 cut(s)	441, 876, 962
BseMII	CTCAG	4 cut(s)	108, 444, 943, 1454
BseNI	ACTGG	7 cut(s)	1219, 1381, 1517, 1556, 1669, 1796, 1847
BseRI	GAGGAG	3 cut(s)	60, 470, 1803
BseXI	GCAGC	2 cut(s)	979, 1367
BshFI	GGCC	2 cut(s)	715, 1526
BshTI	ACCGGT	1 cut(s)	397
BsiHKAI	GWGCWC	1 cut(s)	1834
BsiHKCI	CYCGRG	1 cut(s)	723
BsiSI	CCGG	4 cut(s)	398, 483, 724, 1058
BslFI	GGGAC	5 cut(s)	418, 587, 1030, 1439, 1675
BslI	CCNNNNNNNGG	3 cut(s)	441, 876, 962
BsmAI	GTCTC	6 cut(s)	97, 452, 549, 860, 1367, 1600
BsmFI	GGGAC	5 cut(s)	418, 587, 1030, 1439, 1675
BsmI	GAATGC	1 cut(s)	1708
BsnI	GGCC	2 cut(s)	715, 1526
Bso31I	GGTCTC	3 cut(s)	97, 860, 1600
BsoBI	CYCGRG	1 cut(s)	723
Bsp119I	TTCGAA	2 cut(s)	369, 1013
Bsp1286I	GDGCHC	2 cut(s)	930, 1834
Bsp13I	TCCGGA	1 cut(s)	1057
Bsp143I	GATC	7 cut(s)	104, 123, 223, 298, 485, 520, 595
Bsp19I	CCATGG	1 cut(s)	854
BspACI	CCGC	3 cut(s)	823, 1124, 1353
BspANI	GGCC	2 cut(s)	715, 1526
BspCNI	CTCAG	4 cut(s)	107, 445, 942, 1455
BspEI	TCCGGA	1 cut(s)	1057
BspLI	GGNNCC	3 cut(s)	69, 522, 1515
BspMI	ACCTGC	1 cut(s)	1898
BspOI	GCTAGC	1 cut(s)	146
BspPI	GGATC	5 cut(s)	293, 493, 515, 528, 603
BspT104I	TTCGAA	2 cut(s)	369, 1013
BspTNI	GGTCTC	3 cut(s)	97, 860, 1600
BsrFI	RCCGGY	1 cut(s)	397
BsrI	ACTGG	7 cut(s)	1219, 1381, 1517, 1556, 1669, 1796, 1847
BssAI	RCCGGY	1 cut(s)	397
BssECI	CCNNGG	7 cut(s)	63, 435, 723, 854, 1171, 1246, 1527
BssMI	GATC	7 cut(s)	104, 123, 223, 298, 485, 520, 595
BssT1I	CCWWGG	5 cut(s)	63, 854, 1171, 1246, 1527
Bst2UI	CCWGG	4 cut(s)	303, 437, 1266, 1603
Bst4CI	ACNGT	2 cut(s)	1093, 1114
Bst6I	CTCTTC	3 cut(s)	875, 1100, 1780
BstBAI	YACGTR	1 cut(s)	1154
BstBI	TTCGAA	2 cut(s)	369, 1013
BstC8I	GCNNGC	1 cut(s)	144
BstDSI	CCRYGG	1 cut(s)	854
BstF5I	GGATG	2 cut(s)	484, 571
BstH2I	RGCGCY	1 cut(s)	1511
BstHHI	GCGC	2 cut(s)	1510, 1646
BstKTI	GATC	7 cut(s)	107, 126, 226, 301, 488, 523, 598
BstMAI	GTCTC	6 cut(s)	97, 452, 549, 860, 1367, 1600
BstMBI	GATC	7 cut(s)	104, 123, 223, 298, 485, 520, 595
BstMWI	GCNNNNNNNGC	6 cut(s)	152, 209, 1130, 1248, 1364, 1582
BstNI	CCWGG	4 cut(s)	303, 437, 1266, 1603
BstNSI	RCATGY	1 cut(s)	465
BstSCI	CCNGG	6 cut(s)	301, 435, 722, 723, 1264, 1601
BstSNI	TACGTA	1 cut(s)	1154
BstV1I	GCAGC	2 cut(s)	979, 1367
BstV2I	GAAGAC	2 cut(s)	792, 998
BstX2I	RGATCY	4 cut(s)	104, 123, 485, 520
BstYI	RGATCY	4 cut(s)	104, 123, 485, 520
Bsu36I	CCTNAGG	1 cut(s)	1049
BsuRI	GGCC	2 cut(s)	715, 1526
BtgI	CCRYGG	1 cut(s)	854
BtgZI	GCGATG	1 cut(s)	585
BtsCI	GGATG	2 cut(s)	484, 571
BtsI	GCAGTG	1 cut(s)	1277
BtsIMutI	CAGTG	3 cut(s)	450, 1277, 1803
BveI	ACCTGC	1 cut(s)	1898
Cac8I	GCNNGC	1 cut(s)	144
CfoI	GCGC	2 cut(s)	1510, 1646
Cfr10I	RCCGGY	1 cut(s)	397
Cfr13I	GGNCC	2 cut(s)	556, 1350
Cfr9I	CCCGGG	1 cut(s)	723
CseI	GACGC	1 cut(s)	1547
Csp6I	GTAC	3 cut(s)	1286, 1578, 1840
CspAI	ACCGGT	1 cut(s)	397
CspCI	CAANNNNNGTGG	2 cut(s)	1878, 1913
CviAII	CATG	4 cut(s)	462, 588, 855, 1918
CviQI	GTAC	3 cut(s)	1286, 1578, 1840
DpnI	GATC	7 cut(s)	106, 125, 225, 300, 487, 522, 597
DpnII	GATC	7 cut(s)	104, 123, 223, 298, 485, 520, 595
DraI	TTTAAA	1 cut(s)	619
Eam1104I	CTCTTC	3 cut(s)	875, 1100, 1780
EarI	CTCTTC	3 cut(s)	875, 1100, 1780
Eco105I	TACGTA	1 cut(s)	1154
Eco130I	CCWWGG	5 cut(s)	63, 854, 1171, 1246, 1527
Eco147I	AGGCCT	1 cut(s)	715
Eco24I	GRGCYC	1 cut(s)	930
Eco31I	GGTCTC	3 cut(s)	97, 860, 1600
Eco47I	GGWCC	2 cut(s)	556, 1350
Eco47III	AGCGCT	1 cut(s)	1509
Eco57I	CTGAAG	2 cut(s)	228, 1124
Eco81I	CCTNAGG	1 cut(s)	1049
Eco88I	CYCGRG	1 cut(s)	723
EcoRI	GAATTC	1 cut(s)	1380
EcoRII	CCWGG	4 cut(s)	301, 435, 1264, 1601
EcoT14I	CCWWGG	5 cut(s)	63, 854, 1171, 1246, 1527
EcoT22I	ATGCAT	1 cut(s)	205
EcoT38I	GRGCYC	1 cut(s)	930
ErhI	CCWWGG	5 cut(s)	63, 854, 1171, 1246, 1527
FaeI	CATG	4 cut(s)	465, 591, 858, 1921
FaqI	GGGAC	5 cut(s)	418, 587, 1030, 1439, 1675
FatI	CATG	4 cut(s)	461, 587, 854, 1917
FbaI	TGATCA	1 cut(s)	223
FblI	GTMKAC	2 cut(s)	194, 323
Fnu4HI	GCNGC	2 cut(s)	993, 1356
FokI	GGATG	2 cut(s)	491, 578
FriOI	GRGCYC	1 cut(s)	930
Fsp4HI	GCNGC	2 cut(s)	993, 1356
FspBI	CTAG	6 cut(s)	143, 327, 339, 792, 1637, 1814
GlaI	GCGC	2 cut(s)	1509, 1645
GluI	GCNGC	2 cut(s)	993, 1356
GsuI	CTGGAG	2 cut(s)	531, 1347
HaeII	RGCGCY	1 cut(s)	1511
HaeIII	GGCC	2 cut(s)	715, 1526
HapII	CCGG	4 cut(s)	398, 483, 724, 1058
HgaI	GACGC	1 cut(s)	1547
HhaI	GCGC	2 cut(s)	1510, 1646
Hin1II	CATG	4 cut(s)	465, 591, 858, 1921
Hin6I	GCGC	2 cut(s)	1508, 1644
HinP1I	GCGC	2 cut(s)	1508, 1644
HincII	GTYRAC	1 cut(s)	1561
HindII	GTYRAC	1 cut(s)	1561
HpaI	GTTAAC	1 cut(s)	1561
HpaII	CCGG	4 cut(s)	398, 483, 724, 1058
HphI	GGTGA	6 cut(s)	766, 945, 992, 1126, 1246, 1764
Hpy166II	GTNNAC	6 cut(s)	195, 236, 324, 1561, 1726, 1756
Hpy188III	TCNNGA	7 cut(s)	221, 548, 563, 1058, 1079, 1503, 1805
Hpy8I	GTNNAC	6 cut(s)	195, 236, 324, 1561, 1726, 1756
Hpy99I	CGWCG	1 cut(s)	1541
HpyAV	CCTTC	6 cut(s)	82, 569, 805, 1111, 1500, 1726
HpyCH4III	ACNGT	2 cut(s)	1093, 1114
HpyCH4IV	ACGT	3 cut(s)	191, 1153, 1748
HpyCH4V	TGCA	9 cut(s)	131, 203, 381, 591, 651, 748, 995, 1547, 1706
HpyF10VI	GCNNNNNNNGC	6 cut(s)	152, 209, 1130, 1248, 1364, 1582
HpySE526I	ACGT	3 cut(s)	191, 1153, 1748
Hsp92II	CATG	4 cut(s)	465, 591, 858, 1921
HspAI	GCGC	2 cut(s)	1508, 1644
Kpn2I	TCCGGA	1 cut(s)	1057
Ksp22I	TGATCA	1 cut(s)	223
KspAI	GTTAAC	1 cut(s)	1561
Kzo9I	GATC	7 cut(s)	104, 123, 223, 298, 485, 520, 595
LmnI	GCTCC	5 cut(s)	73, 388, 444, 1060, 1829
Lsp1109I	GCAGC	2 cut(s)	979, 1367
LweI	GCATC	5 cut(s)	212, 428, 456, 469, 1047
MaeI	CTAG	6 cut(s)	143, 327, 339, 792, 1637, 1814
MaeII	ACGT	3 cut(s)	191, 1153, 1748
MaeIII	GTNAC	6 cut(s)	343, 692, 845, 1126, 1466, 1618
MalI	GATC	7 cut(s)	106, 125, 225, 300, 487, 522, 597
MboI	GATC	7 cut(s)	104, 123, 223, 298, 485, 520, 595
MfeI	CAATTG	1 cut(s)	132
MflI	RGATCY	4 cut(s)	104, 123, 485, 520
MhlI	GDGCHC	2 cut(s)	930, 1834
MlyI	GAGTC	3 cut(s)	1013, 1322, 1830
MmeI	TCCRAC	2 cut(s)	147, 1560
Mph1103I	ATGCAT	1 cut(s)	205
MroI	TCCGGA	1 cut(s)	1057
MseI	TTAA	7 cut(s)	20, 243, 471, 515, 618, 1416, 1560
MslI	CAYNNNNRTG	2 cut(s)	231, 1464
MspA1I	CMGCKG	1 cut(s)	1478
MspI	CCGG	4 cut(s)	398, 483, 724, 1058
MspR9I	CCNGG	6 cut(s)	303, 437, 724, 725, 1266, 1603
MunI	CAATTG	1 cut(s)	132
Mva1269I	GAATGC	1 cut(s)	1708
MvaI	CCWGG	4 cut(s)	303, 437, 1266, 1603
MwoI	GCNNNNNNNGC	6 cut(s)	152, 209, 1130, 1248, 1364, 1582
NciI	CCSGG	2 cut(s)	724, 725
NcoI	CCATGG	1 cut(s)	854
NdeII	GATC	7 cut(s)	104, 123, 223, 298, 485, 520, 595
NheI	GCTAGC	1 cut(s)	142
NlaIII	CATG	4 cut(s)	465, 591, 858, 1921
NlaIV	GGNNCC	3 cut(s)	69, 522, 1515
NmuCI	GTSAC	3 cut(s)	343, 692, 1466
NsiI	ATGCAT	1 cut(s)	205
NspI	RCATGY	1 cut(s)	465
NspV	TTCGAA	2 cut(s)	369, 1013
PceI	AGGCCT	1 cut(s)	715
PciI	ACATGT	1 cut(s)	461
PctI	GAATGC	1 cut(s)	1708
PfeI	GAWTC	7 cut(s)	551, 611, 631, 968, 1054, 1499, 1532
PflFI	GACNNNGTC	1 cut(s)	1820
PfoI	TCCNGGA	1 cut(s)	301
PinAI	ACCGGT	1 cut(s)	397
PkrI	GCNGC	2 cut(s)	994, 1357
PleI	GAGTC	3 cut(s)	1013, 1322, 1829
PpsI	GAGTC	3 cut(s)	1013, 1322, 1829
Ppu21I	YACGTR	1 cut(s)	1154
PscI	ACATGT	1 cut(s)	461
PshBI	ATTAAT	1 cut(s)	1416
PsiI	TTATAA	1 cut(s)	684
Psp1406I	AACGTT	1 cut(s)	1748
Psp6I	CCWGG	4 cut(s)	301, 435, 1264, 1601
PspGI	CCWGG	4 cut(s)	301, 435, 1264, 1601
PspN4I	GGNNCC	3 cut(s)	69, 522, 1515
PspPI	GGNCC	2 cut(s)	556, 1350
PsrI	GAACNNNNNNTAC	2 cut(s)	1059, 1091
PsuI	RGATCY	4 cut(s)	104, 123, 485, 520
PsyI	GACNNNGTC	1 cut(s)	1820
PvuII	CAGCTG	1 cut(s)	1478
RsaI	GTAC	3 cut(s)	1287, 1579, 1841
RsaNI	GTAC	3 cut(s)	1286, 1578, 1840
RseI	CAYNNNNRTG	2 cut(s)	231, 1464
SaqAI	TTAA	7 cut(s)	20, 243, 471, 515, 618, 1416, 1560
SatI	GCNGC	2 cut(s)	993, 1356
Sau3AI	GATC	7 cut(s)	104, 123, 223, 298, 485, 520, 595
Sau96I	GGNCC	2 cut(s)	556, 1350
SchI	GAGTC	3 cut(s)	1013, 1322, 1830
ScrFI	CCNGG	6 cut(s)	303, 437, 724, 725, 1266, 1603
SduI	GDGCHC	2 cut(s)	930, 1834
SfaNI	GCATC	5 cut(s)	212, 428, 456, 469, 1047
SfuI	TTCGAA	2 cut(s)	369, 1013
SinI	GGWCC	2 cut(s)	556, 1350
SmaI	CCCGGG	1 cut(s)	725
SmiMI	CAYNNNNRTG	2 cut(s)	231, 1464
SmlI	CTYRAG	1 cut(s)	1803
SmoI	CTYRAG	1 cut(s)	1803
SnaBI	TACGTA	1 cut(s)	1154
SpeI	ACTAGT	1 cut(s)	326
SseBI	AGGCCT	1 cut(s)	715
SsiI	CCGC	3 cut(s)	823, 1124, 1353
SspI	AATATT	1 cut(s)	58
SspMI	CTAG	6 cut(s)	143, 327, 339, 792, 1637, 1814
StuI	AGGCCT	1 cut(s)	715
StyD4I	CCNGG	6 cut(s)	301, 435, 722, 723, 1264, 1601
StyI	CCWWGG	5 cut(s)	63, 854, 1171, 1246, 1527
TaaI	ACNGT	2 cut(s)	1093, 1114
TaiI	ACGT	3 cut(s)	194, 1156, 1751
TaqI	TCGA	4 cut(s)	297, 369, 1013, 1714
TaqII	GACCGA	1 cut(s)	544
TfiI	GAWTC	7 cut(s)	551, 611, 631, 968, 1054, 1499, 1532
Tru1I	TTAA	7 cut(s)	20, 243, 471, 515, 618, 1416, 1560
Tru9I	TTAA	7 cut(s)	20, 243, 471, 515, 618, 1416, 1560
TscAI	CASTG	3 cut(s)	457, 1284, 1803
TseFI	GTSAC	3 cut(s)	343, 692, 1466
TseI	GCWGC	2 cut(s)	992, 1355
Tsp45I	GTSAC	3 cut(s)	343, 692, 1466
TspDTI	ATGAA	7 cut(s)	129, 863, 1416, 1461, 1482, 1497, 1874
TspGWI	ACGGA	1 cut(s)	608
TspMI	CCCGGG	1 cut(s)	723
TspRI	CASTG	3 cut(s)	457, 1284, 1803
Tth111I	GACNNNGTC	1 cut(s)	1820
VpaK11BI	GGWCC	2 cut(s)	556, 1350
VspI	ATTAAT	1 cut(s)	1416
XapI	RAATTY	2 cut(s)	686, 1380
XceI	RCATGY	1 cut(s)	465
XmaI	CCCGGG	1 cut(s)	723
XmiI	GTMKAC	2 cut(s)	194, 323
XspI	CTAG	6 cut(s)	143, 327, 339, 792, 1637, 1814
Zsp2I	ATGCAT	1 cut(s)	205

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.