Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0004907

Physical Location & Seq

Genomic Coordinates Forward (+)

27845527 .. 27850884

Gene Structure 5358 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1200400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2025 bp

ATGGTGTTGAAGAAGAGGCTCGATTTTGGATTTAATGGCTTCCAGGTCCCTACTATACCTAGAGCTCCCAGATCAGCTAGGAGGGGCCCACATAGGAAGTCGGTCGAGGATGGCCAATTCTGTGCATTTGAATTATTGGCCTCTTTAGCTGGAAAGTTATTGCAGGAGAGTGAAAGTTCTGCCTCCAGTAATGCTTCTGAAGGAAATTTGCAGCCTGCCTTTGGCATAGACGTTAAGCAGGAAAGACAAGATGAACATAAACCTCTGAAAGAAGAGTGCCCTGATCAGGGAAGCTCCGAAGAAAGCGTTTCTTTAGGGCTGACATCCCAAAACGTAGATCAGAAGGGCATTCTAAAAGAAATTCCGTATGCCGACAGTGATACTGTTTTGGAACGCACTTCAGTTATTACAACTTCAGACAGCTCTGCAAAAGCTGGGCGCCGGGCAAAGTCTGTAATTTCCAGTAGCAGGCCCACATTTCAAAATTATTCTGGTAAGGTAGAGGGGGGATCCCTGGGTATTGTGGAGTCCTGTTACGGTAATATAGCAAATGGAATTGAAGTACAGGAAGATAGTAAGCCGTTAGAAACTGGAGCTTTGAAGATAGCTAACCCATGCAGTTCCAAGGATCCAACTGAACTGCATGCAAAATATCCTGCAATGCTCAATGGAGACAGCAATGTCAAATTGTCATTGTTCAGGGATCCTGTTTCTAATGCTTCTTTTTCCAGGCATAGGAATGATATTGAATTAGGTAGTAGAGATGATGACGAAAACTTTACTAGGTGCATTAAACCTAGCAACAGGGTGAAGGTCTTTAGGCCTCCACCACGTGTTGGAGACCGAAGAATAAGGAAGTTACTGACATCCAAGTACTGGAAAGCGGCTCCAAAGTTGAGGGAATGTGAGCACTATAGATATGATGGGGGAGTAAAAACTATTTATCACAAAAGGAAAACCTTTTACAACCGTGAAAGATCTCAACGTGACACTCTTTATAAGAGGAGGAAACTGGTTGATCGGAGTTGGGTAGTGACTTCTGATGGAGGGTTTAGTGGTGAAAGTGTTTCTAACTCACCCGATAACGGAGATAAAACTGGTCCAGCTGCAAACGGAGTGTCAGCTTCAGTTATTGGTCATCTAACATCTTTCCGCTCTGAGGAATCTCACGTGAAATTGAGAATCAAATCCTTTAGGGTTCCAGAGCTTGTCATTGAGGTCCCAGAAACTGAAACAGTCGGTTCATTGAAGAGGACAGTCATGGATGCAGTGAATGCCATACTTAGGGATGGTTTAAGTGTTGGAGTACTAGTTCAAGGGAAAAACATAAGAGATGACAACAGAACTCTAATGCAGATGGGAATTTCTTCCAAAGACAGTTTGGATTCTCTGGGTTTTATGTTGGAGCCAAGTCATGTGCAAGCTCCTCCATTTTTGTGTTCTGGCGATCCTCCATTTTCATGCAAGATGGTGGCCAGGTCCCCAGGCTTACCTGTCTTGGACTCTCCAATGTCTGATGTGTTGTCTGACGTTCCTCCTACAACCAATTCAGGCAGTCTTGCTGAAACTAAGCATGAACCAGTTTCCTCTCATATTGACATATTGACCAACAAAACAATGCTGGAATCCCAGGCGCTAGTTGCAATTCCAGAAATGAGCATGGAGCCACTAGCCATAGTTCCTGTGAGCCAGAAAACTAAGCGATCTGAGCTTGCACAGCGTCGAACCAGGAGACCATTCTCTGTCTCAGAAGTCGAAGCATTGGTGACAGCAGTTGAGGAACTTGGAACTGGAAGGTGGCGCGATGTTAAATTGCGCTCATTTGAGAATGCAGATCATCGAACTTATGTGGACCTGAAGGATAAATGGAAAACCTTAGTCCACACTGCAAAAATCTCTCCTCAGCAAAGAAGGGGAGAGCCCGTTCCTCAGGAGCTTTTGGACCGAGTGTTGGCTGCCCATTCTTACTGGTGCCAACACCAAGCAAAGCAACACAGCAAGCACCCGGCCTTGCCAACATTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000723 GO:0000781 GO:0000782 GO:0000783 GO:0000784 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003691 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008301 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016043 GO:0031627 GO:0031974 GO:0031981 GO:0032200 GO:0032991 GO:0032993 GO:0033993 GO:0034641 GO:0042162 GO:0042221 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0060249 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0097305 GO:0098687 GO:1901360 GO:1901363 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

675

Amino Acids

74.67

Weight (kDa)

9.07

Isoelectric Point (pI)

57.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ubiquitin_TPR1	PF23603	390 - 457	2.8e-36	Telomere repeat-binding protein 1-like, ubiquitin-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004907)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12560 AT3G12560 AT5G13820 AT5G13820
fragaria_vesca	FvH4_7g22710 FvH4_7g22710 FvH4_7g22710 FvH4_7g22710 FvH4_7g22710 FvH4_7g22710 FvH4_7g22710 FvH4_7g22710
malus_domestica	MD01G1135700.v1.1 MD07G1200400.v1.1
prunus_persica	Prupe.2G237100_v2.0.a1
pyrus_communis	pycom01g15650 pycom07g18730 pycom07g18740
rosa_chinensis	RchiOBHm_Chr1g0367801
rosa_laevigata	RLG00000027262
rosa_multiflora	Rmu_co8480775.1_g000001 Rmu_ssc0000395.1_g000024
rosa_roxburghii	Rroxscaffold_4G00289210
rosa_rugosa	Rorug01G0336700 Rorug01G0336800
rosa_samantha	Rh1AG343900 Rh1BG305800 Rh1CG321400 Rh1DG338000
rosa_wichuraiana	Rw1G030610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	999
AasI	GACNNNNNNGTC	1 cut(s)	680
AccB1I	GGYRCC	2 cut(s)	438, 1971
AccB7I	CCANNNNNTGG	2 cut(s)	836, 876
AccBSI	CCGCTC	1 cut(s)	1155
AccII	CGCG	1 cut(s)	1803
AciI	CCGC	2 cut(s)	884, 1153
AclWI	GGATC	7 cut(s)	504, 517, 623, 636, 698, 711, 1442
AcoI	YGGCCR	2 cut(s)	112, 1473
AcsI	RAATTY	3 cut(s)	205, 360, 1362
AcuI	CTGAAG	5 cut(s)	219, 384, 399, 1110, 1877
AcvI	CACGTG	2 cut(s)	833, 1171
AcyI	GRCGYC	1 cut(s)	439
AdeI	CACNNNGTG	1 cut(s)	833
AfaI	GTAC	3 cut(s)	564, 875, 1308
AflIII	ACRYGT	1 cut(s)	832
AgsI	TTSAA	8 cut(s)	10, 131, 482, 560, 601, 749, 1249, 1316
AhlI	ACTAGT	1 cut(s)	1309
AjnI	CCWGG	7 cut(s)	42, 513, 728, 1475, 1483, 1629, 1727
AloI	GAACNNNNNNTCC	4 cut(s)	1296, 1328, 1908, 1940
Alw21I	GWGCWC	2 cut(s)	67, 912
Alw26I	GTCTC	4 cut(s)	666, 834, 1726, 1750
AlwI	GGATC	7 cut(s)	504, 517, 623, 636, 698, 711, 1442
AlwNI	CAGNNNCTG	1 cut(s)	1229
AoxI	GGCC	7 cut(s)	85, 112, 138, 470, 821, 1473, 2007
ApaI	GGGCCC	1 cut(s)	89
ApeKI	GCWGC	3 cut(s)	211, 1106, 1955
ApoI	RAATTY	3 cut(s)	205, 360, 1362
ArsI	GACNNNNNNTTYG	2 cut(s)	1103, 1135
Asp700I	GAANNNNTTC	1 cut(s)	1366
AspLEI	GCGC	4 cut(s)	441, 1636, 1803, 1818
AspS9I	GGNCC	9 cut(s)	46, 85, 86, 471, 1100, 1219, 1479, 1852, 1942
AsuC2I	CCSGG	2 cut(s)	443, 2006
AsuHPI	GGTGA	4 cut(s)	820, 1068, 1070, 1777
AvaII	GGWCC	6 cut(s)	46, 1100, 1219, 1479, 1852, 1942
AxyI	CCTNAGG	1 cut(s)	1929
BaeGI	GKGCMC	2 cut(s)	89, 281
BalI	TGGCCA	2 cut(s)	114, 1475
BamHI	GGATCC	3 cut(s)	509, 628, 703
BanI	GGYRCC	2 cut(s)	438, 1971
BanII	GRGCYC	3 cut(s)	67, 89, 1923
BbrPI	CACGTG	2 cut(s)	833, 1171
Bbv12I	GWGCWC	2 cut(s)	67, 912
BbvCI	CCTCAGC	1 cut(s)	1902
BbvI	GCAGC	3 cut(s)	223, 1093, 1942
BccI	CCATC	6 cut(s)	104, 917, 1037, 1283, 1351, 1462
BceAI	ACGGC	1 cut(s)	565
BciT130I	CCWGG	7 cut(s)	44, 515, 730, 1477, 1485, 1631, 1729
BclI	TGATCA	1 cut(s)	283
BcnI	CCSGG	2 cut(s)	443, 2006
BcoDI	GTCTC	4 cut(s)	666, 834, 1726, 1750
BcuI	ACTAGT	1 cut(s)	1309
BfaI	CTAG	7 cut(s)	60, 78, 783, 798, 1310, 1637, 1670
BfmI	CTRYAG	1 cut(s)	913
BfoI	RGCGCY	2 cut(s)	442, 1637
BglII	AGATCT	1 cut(s)	977
BisI	GCNGC	4 cut(s)	212, 885, 1107, 1956
BlsI	GCNGC	4 cut(s)	213, 886, 1108, 1957
BmcAI	AGTACT	2 cut(s)	875, 1308
Bme1390I	CCNGG	9 cut(s)	44, 443, 515, 730, 1477, 1485, 1631, 1729, 2006
Bme18I	GGWCC	6 cut(s)	46, 1100, 1219, 1479, 1852, 1942
BmgT120I	GGNCC	9 cut(s)	46, 85, 86, 471, 1100, 1219, 1479, 1852, 1942
BmrFI	CCNGG	9 cut(s)	44, 443, 515, 730, 1477, 1485, 1631, 1729, 2006
BmsI	GCATC	1 cut(s)	1255
BpmI	CTGGAG	2 cut(s)	169, 612
Bpu10I	CCTNAGC	1 cut(s)	1902
BpuMI	CCSGG	2 cut(s)	443, 2006
BsaAI	YACGTR	2 cut(s)	833, 1171
BsaHI	GRCGYC	1 cut(s)	439
BsaI	GGTCTC	2 cut(s)	834, 1726
BsaJI	CCNNGG	5 cut(s)	513, 514, 624, 1483, 1629
BsaXI	ACNNNNNCTCC	4 cut(s)	1296, 1326, 1908, 1938
Bse1I	ACTGG	9 cut(s)	186, 462, 595, 881, 1017, 1102, 1580, 1795, 1973
Bse21I	CCTNAGG	1 cut(s)	1929
Bse3DI	GCAATG	2 cut(s)	666, 685
BseBI	CCWGG	7 cut(s)	44, 515, 730, 1477, 1485, 1631, 1729
BseDI	CCNNGG	5 cut(s)	513, 514, 624, 1483, 1629
BseGI	GGATG	5 cut(s)	115, 323, 866, 1270, 1294
BseMI	GCAATG	2 cut(s)	666, 685
BseMII	CTCAG	5 cut(s)	1149, 1698, 1761, 1916, 1943
BseNI	ACTGG	9 cut(s)	186, 462, 595, 881, 1017, 1102, 1580, 1795, 1973
BseRI	GAGGAG	3 cut(s)	1018, 1416, 1890
BseSI	GKGCMC	2 cut(s)	89, 281
BseXI	GCAGC	3 cut(s)	223, 1093, 1942
BseYI	CCCAGC	1 cut(s)	434
Bsh1236I	CGCG	1 cut(s)	1803
Bsh1285I	CGRYCG	1 cut(s)	105
BshFI	GGCC	7 cut(s)	87, 114, 140, 472, 823, 1475, 2009
BshNI	GGYRCC	2 cut(s)	438, 1971
BsiEI	CGRYCG	1 cut(s)	105
BsiHKAI	GWGCWC	2 cut(s)	67, 912
BsiSI	CCGG	2 cut(s)	442, 2006
BslFI	GGGAC	3 cut(s)	32, 1205, 1465
BsmAI	GTCTC	4 cut(s)	666, 834, 1726, 1750
BsmFI	GGGAC	3 cut(s)	32, 1205, 1465
BsmI	GAATGC	3 cut(s)	348, 1279, 1834
BsnI	GGCC	7 cut(s)	87, 114, 140, 472, 823, 1475, 2009
Bso31I	GGTCTC	2 cut(s)	834, 1726
Bsp120I	GGGCCC	1 cut(s)	85
Bsp1286I	GDGCHC	5 cut(s)	67, 89, 281, 912, 1923
BspACI	CCGC	2 cut(s)	884, 1153
BspANI	GGCC	7 cut(s)	87, 114, 140, 472, 823, 1475, 2009
BspCNI	CTCAG	5 cut(s)	1150, 1699, 1760, 1915, 1942
BspFNI	CGCG	1 cut(s)	1803
BspPI	GGATC	7 cut(s)	504, 517, 623, 636, 698, 711, 1442
BspT107I	GGYRCC	2 cut(s)	438, 1971
BspTNI	GGTCTC	2 cut(s)	834, 1726
BsrBI	CCGCTC	1 cut(s)	1155
BsrDI	GCAATG	2 cut(s)	666, 685
BsrI	ACTGG	9 cut(s)	186, 462, 595, 881, 1017, 1102, 1580, 1795, 1973
BssECI	CCNNGG	5 cut(s)	513, 514, 624, 1483, 1629
BssNI	GRCGYC	1 cut(s)	439
BssT1I	CCWWGG	1 cut(s)	624
Bst2UI	CCWGG	7 cut(s)	44, 515, 730, 1477, 1485, 1631, 1729
Bst4CI	ACNGT	7 cut(s)	377, 385, 539, 971, 1237, 1258, 1379
Bst6I	CTCTTC	3 cut(s)	8, 267, 1244
BstACI	GRCGYC	1 cut(s)	439
BstAPI	GCANNNNNTGC	1 cut(s)	1274
BstBAI	YACGTR	2 cut(s)	833, 1171
BstC8I	GCNNGC	6 cut(s)	216, 470, 645, 1422, 1713, 2000
BstDEI	CTNAG	9 cut(s)	1158, 1283, 1569, 1698, 1707, 1747, 1876, 1902, 1929
BstF5I	GGATG	5 cut(s)	115, 323, 866, 1270, 1294
BstFNI	CGCG	1 cut(s)	1803
BstH2I	RGCGCY	2 cut(s)	442, 1637
BstHHI	GCGC	4 cut(s)	441, 1636, 1803, 1818
BstMAI	GTCTC	4 cut(s)	666, 834, 1726, 1750
BstMCI	CGRYCG	1 cut(s)	105
BstMWI	GCNNNNNNNGC	5 cut(s)	146, 1274, 1640, 1708, 1717
BstNI	CCWGG	7 cut(s)	44, 515, 730, 1477, 1485, 1631, 1729
BstNSI	RCATGY	1 cut(s)	647
BstSCI	CCNGG	9 cut(s)	42, 441, 513, 728, 1475, 1483, 1629, 1727, 2004
BstSFI	CTRYAG	1 cut(s)	913
BstSLI	GKGCMC	2 cut(s)	89, 281
BstUI	CGCG	1 cut(s)	1803
BstV1I	GCAGC	3 cut(s)	223, 1093, 1942
BstX2I	RGATCY	4 cut(s)	509, 628, 703, 977
BstYI	RGATCY	4 cut(s)	509, 628, 703, 977
Bsu36I	CCTNAGG	1 cut(s)	1929
BsuRI	GGCC	7 cut(s)	87, 114, 140, 472, 823, 1475, 2009
BtgZI	GCGATG	1 cut(s)	1818
BtsCI	GGATG	5 cut(s)	115, 323, 866, 1270, 1294
BtsI	GCAGTG	2 cut(s)	1275, 1884
BtsIMutI	CAGTG	3 cut(s)	382, 1275, 1884
Cac8I	GCNNGC	6 cut(s)	216, 470, 645, 1422, 1713, 2000
CaiI	CAGNNNCTG	1 cut(s)	1229
CfoI	GCGC	4 cut(s)	441, 1636, 1803, 1818
Cfr13I	GGNCC	9 cut(s)	46, 85, 86, 471, 1100, 1219, 1479, 1852, 1942
CseI	GACGC	1 cut(s)	1709
Csp6I	GTAC	3 cut(s)	563, 874, 1307
CviAII	CATG	7 cut(s)	615, 644, 1261, 1415, 1461, 1574, 1660
CviQI	GTAC	3 cut(s)	563, 874, 1307
DdeI	CTNAG	9 cut(s)	1158, 1283, 1569, 1698, 1707, 1747, 1876, 1902, 1929
DinI	GGCGCC	1 cut(s)	440
DraIII	CACNNNGTG	1 cut(s)	833
DrdI	GACNNNNNNGTC	1 cut(s)	680
DseDI	GACNNNNNNGTC	1 cut(s)	680
EaeI	YGGCCR	2 cut(s)	112, 1473
Eam1104I	CTCTTC	3 cut(s)	8, 267, 1244
EarI	CTCTTC	3 cut(s)	8, 267, 1244
Ecl136II	GAGCTC	1 cut(s)	65
Eco130I	CCWWGG	1 cut(s)	624
Eco147I	AGGCCT	1 cut(s)	823
Eco24I	GRGCYC	3 cut(s)	67, 89, 1923
Eco31I	GGTCTC	2 cut(s)	834, 1726
Eco47I	GGWCC	6 cut(s)	46, 1100, 1219, 1479, 1852, 1942
Eco53kI	GAGCTC	1 cut(s)	65
Eco57I	CTGAAG	5 cut(s)	219, 384, 399, 1110, 1877
Eco72I	CACGTG	2 cut(s)	833, 1171
Eco81I	CCTNAGG	1 cut(s)	1929
EcoICRI	GAGCTC	1 cut(s)	65
EcoO109I	RGGNCCY	4 cut(s)	46, 85, 1219, 1479
EcoRII	CCWGG	7 cut(s)	42, 513, 728, 1475, 1483, 1629, 1727
EcoT14I	CCWWGG	1 cut(s)	624
EcoT38I	GRGCYC	3 cut(s)	67, 89, 1923
EgeI	GGCGCC	1 cut(s)	440
EheI	GGCGCC	1 cut(s)	440
ErhI	CCWWGG	1 cut(s)	624
FaeI	CATG	7 cut(s)	618, 647, 1264, 1418, 1464, 1577, 1663
FalI	AAGNNNNNCTT	2 cut(s)	295, 327
FaqI	GGGAC	3 cut(s)	32, 1205, 1465
FatI	CATG	7 cut(s)	614, 643, 1260, 1414, 1460, 1573, 1659
FbaI	TGATCA	1 cut(s)	283
Fnu4HI	GCNGC	4 cut(s)	212, 885, 1107, 1956
FokI	GGATG	5 cut(s)	122, 310, 853, 1277, 1301
FriOI	GRGCYC	3 cut(s)	67, 89, 1923
Fsp4HI	GCNGC	4 cut(s)	212, 885, 1107, 1956
FspBI	CTAG	7 cut(s)	60, 78, 783, 798, 1310, 1637, 1670
GlaI	GCGC	4 cut(s)	440, 1635, 1802, 1817
GluI	GCNGC	4 cut(s)	212, 885, 1107, 1956
GsaI	CCCAGC	1 cut(s)	438
GsuI	CTGGAG	2 cut(s)	169, 612
HaeII	RGCGCY	2 cut(s)	442, 1637
HaeIII	GGCC	7 cut(s)	87, 114, 140, 472, 823, 1475, 2009
HapII	CCGG	2 cut(s)	442, 2006
HgaI	GACGC	1 cut(s)	1709
HhaI	GCGC	4 cut(s)	441, 1636, 1803, 1818
Hin1I	GRCGYC	1 cut(s)	439
Hin1II	CATG	7 cut(s)	618, 647, 1264, 1418, 1464, 1577, 1663
Hin6I	GCGC	4 cut(s)	439, 1634, 1801, 1816
HinP1I	GCGC	4 cut(s)	439, 1634, 1801, 1816
HinfI	GANTC	6 cut(s)	527, 1163, 1182, 1385, 1502, 1625
HpaII	CCGG	2 cut(s)	442, 2006
HphI	GGTGA	4 cut(s)	820, 1068, 1070, 1777
Hpy166II	GTNNAC	2 cut(s)	1852, 1882
Hpy188III	TCNNGA	3 cut(s)	1202, 1649, 1931
Hpy8I	GTNNAC	2 cut(s)	1852, 1882
Hpy99I	CGWCG	1 cut(s)	1725
HpyAV	CCTTC	6 cut(s)	194, 337, 805, 1788, 1852, 1905
HpyCH4III	ACNGT	7 cut(s)	377, 385, 539, 971, 1237, 1258, 1379
HpyCH4IV	ACGT	6 cut(s)	231, 333, 832, 985, 1170, 1530
HpyF10VI	GCNNNNNNNGC	5 cut(s)	146, 1274, 1640, 1708, 1717
HpyF3I	CTNAG	9 cut(s)	1158, 1283, 1569, 1698, 1707, 1747, 1876, 1902, 1929
HpySE526I	ACGT	6 cut(s)	231, 333, 832, 985, 1170, 1530
Hsp92I	GRCGYC	1 cut(s)	439
Hsp92II	CATG	7 cut(s)	618, 647, 1264, 1418, 1464, 1577, 1663
HspAI	GCGC	4 cut(s)	439, 1634, 1801, 1816
KasI	GGCGCC	1 cut(s)	438
Ksp22I	TGATCA	1 cut(s)	283
LmnI	GCTCC	8 cut(s)	70, 299, 593, 892, 1405, 1429, 1663, 1933
Lsp1109I	GCAGC	3 cut(s)	223, 1093, 1942
LweI	GCATC	1 cut(s)	1255
MaeI	CTAG	7 cut(s)	60, 78, 783, 798, 1310, 1637, 1670
MaeII	ACGT	6 cut(s)	231, 333, 832, 985, 1170, 1530
MaeIII	GTNAC	5 cut(s)	533, 858, 986, 1033, 1765
MbiI	CCGCTC	1 cut(s)	1155
MboII	GAAGA	9 cut(s)	22, 25, 284, 311, 581, 613, 858, 1261, 1359
MflI	RGATCY	4 cut(s)	509, 628, 703, 977
MhlI	GDGCHC	5 cut(s)	67, 89, 281, 912, 1923
MlsI	TGGCCA	2 cut(s)	114, 1475
MluNI	TGGCCA	2 cut(s)	114, 1475
Mly113I	GGCGCC	1 cut(s)	439
MlyI	GAGTC	2 cut(s)	536, 1496
MmeI	TCCRAC	4 cut(s)	656, 817, 1282, 1383
Mox20I	TGGCCA	2 cut(s)	114, 1475
MroXI	GAANNNNTTC	1 cut(s)	1366
MscI	TGGCCA	2 cut(s)	114, 1475
MseI	TTAA	5 cut(s)	33, 234, 792, 1295, 1809
MslI	CAYNNNNRTG	3 cut(s)	738, 1435, 1459
Msp20I	TGGCCA	2 cut(s)	114, 1475
MspA1I	CMGCKG	1 cut(s)	1106
MspI	CCGG	2 cut(s)	442, 2006
MspR9I	CCNGG	9 cut(s)	44, 443, 515, 730, 1477, 1485, 1631, 1729, 2006
Mva1269I	GAATGC	3 cut(s)	348, 1279, 1834
MvaI	CCWGG	7 cut(s)	44, 515, 730, 1477, 1485, 1631, 1729
MvnI	CGCG	1 cut(s)	1803
MwoI	GCNNNNNNNGC	5 cut(s)	146, 1274, 1640, 1708, 1717
NarI	GGCGCC	1 cut(s)	439
NciI	CCSGG	2 cut(s)	443, 2006
NlaIII	CATG	7 cut(s)	618, 647, 1264, 1418, 1464, 1577, 1663
NmuCI	GTSAC	3 cut(s)	986, 1033, 1765
NspI	RCATGY	1 cut(s)	647
PaeI	GCATGC	1 cut(s)	647
PasI	CCCWGGG	1 cut(s)	514
PceI	AGGCCT	1 cut(s)	823
PctI	GAATGC	3 cut(s)	348, 1279, 1834
PdmI	GAANNNNTTC	1 cut(s)	1366
PfeI	GAWTC	4 cut(s)	1163, 1182, 1385, 1625
PflMI	CCANNNNNTGG	2 cut(s)	836, 876
PkrI	GCNGC	4 cut(s)	213, 886, 1108, 1957
PleI	GAGTC	2 cut(s)	535, 1496
PluTI	GGCGCC	1 cut(s)	442
PmaCI	CACGTG	2 cut(s)	833, 1171
PmlI	CACGTG	2 cut(s)	833, 1171
PpsI	GAGTC	2 cut(s)	535, 1496
Ppu21I	YACGTR	2 cut(s)	833, 1171
PpuMI	RGGWCCY	3 cut(s)	46, 1219, 1479
PsiI	TTATAA	1 cut(s)	999
Psp124BI	GAGCTC	1 cut(s)	67
Psp5II	RGGWCCY	3 cut(s)	46, 1219, 1479
Psp6I	CCWGG	7 cut(s)	42, 513, 728, 1475, 1483, 1629, 1727
PspCI	CACGTG	2 cut(s)	833, 1171
PspFI	CCCAGC	1 cut(s)	434
PspGI	CCWGG	7 cut(s)	42, 513, 728, 1475, 1483, 1629, 1727
PspOMI	GGGCCC	1 cut(s)	85
PspPI	GGNCC	9 cut(s)	46, 85, 86, 471, 1100, 1219, 1479, 1852, 1942
PspPPI	RGGWCCY	3 cut(s)	46, 1219, 1479
PstNI	CAGNNNCTG	1 cut(s)	1229
PsuI	RGATCY	4 cut(s)	509, 628, 703, 977
PvuII	CAGCTG	1 cut(s)	1106
RsaI	GTAC	3 cut(s)	564, 875, 1308
RsaNI	GTAC	3 cut(s)	563, 874, 1307
RseI	CAYNNNNRTG	3 cut(s)	738, 1435, 1459
SacI	GAGCTC	1 cut(s)	67
SaqAI	TTAA	5 cut(s)	33, 234, 792, 1295, 1809
SatI	GCNGC	4 cut(s)	212, 885, 1107, 1956
Sau96I	GGNCC	9 cut(s)	46, 85, 86, 471, 1100, 1219, 1479, 1852, 1942
ScaI	AGTACT	2 cut(s)	875, 1308
SchI	GAGTC	2 cut(s)	536, 1496
ScrFI	CCNGG	9 cut(s)	44, 443, 515, 730, 1477, 1485, 1631, 1729, 2006
SduI	GDGCHC	5 cut(s)	67, 89, 281, 912, 1923
SfaNI	GCATC	1 cut(s)	1255
SfcI	CTRYAG	1 cut(s)	913
SfoI	GGCGCC	1 cut(s)	440
SinI	GGWCC	6 cut(s)	46, 1100, 1219, 1479, 1852, 1942
SmiMI	CAYNNNNRTG	3 cut(s)	738, 1435, 1459
SpeI	ACTAGT	1 cut(s)	1309
SphI	GCATGC	1 cut(s)	647
SseBI	AGGCCT	1 cut(s)	823
SsiI	CCGC	2 cut(s)	884, 1153
SspDI	GGCGCC	1 cut(s)	438
SspMI	CTAG	7 cut(s)	60, 78, 783, 798, 1310, 1637, 1670
SstI	GAGCTC	1 cut(s)	67
StuI	AGGCCT	1 cut(s)	823
StyD4I	CCNGG	9 cut(s)	42, 441, 513, 728, 1475, 1483, 1629, 1727, 2004
StyI	CCWWGG	1 cut(s)	624
TaaI	ACNGT	7 cut(s)	377, 385, 539, 971, 1237, 1258, 1379
TaiI	ACGT	6 cut(s)	234, 336, 835, 988, 1173, 1533
TaqI	TCGA	5 cut(s)	21, 105, 1723, 1755, 1840
TaqII	GACCGA	3 cut(s)	91, 858, 1959
TatI	WGTACW	3 cut(s)	562, 873, 1306
TauI	GCSGC	1 cut(s)	887
TfiI	GAWTC	4 cut(s)	1163, 1182, 1385, 1625
Tru1I	TTAA	5 cut(s)	33, 234, 792, 1295, 1809
Tru9I	TTAA	5 cut(s)	33, 234, 792, 1295, 1809
TscAI	CASTG	3 cut(s)	382, 1275, 1891
TseFI	GTSAC	3 cut(s)	986, 1033, 1765
TseI	GCWGC	3 cut(s)	211, 1106, 1955
Tsp45I	GTSAC	3 cut(s)	986, 1033, 1765
TspDTI	ATGAA	4 cut(s)	267, 1233, 1449, 1590
TspGWI	ACGGA	3 cut(s)	354, 1101, 1128
TspRI	CASTG	3 cut(s)	382, 1275, 1891
Van91I	CCANNNNNTGG	2 cut(s)	836, 876
VpaK11BI	GGWCC	6 cut(s)	46, 1100, 1219, 1479, 1852, 1942
XapI	RAATTY	3 cut(s)	205, 360, 1362
XceI	RCATGY	1 cut(s)	647
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1378
XmnI	GAANNNNTTC	1 cut(s)	1366
XspI	CTAG	7 cut(s)	60, 78, 783, 798, 1310, 1637, 1670
ZrmI	AGTACT	2 cut(s)	875, 1308

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.