AT3G13530

ATP binding binding kinase protein kinase protein serine threonine kinase protein tyrosine kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
4411688 .. 4423000
11313 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G13530.1

Sequence Viewer

Length: 4107 bp
ATGGCGCGGCAAATGACGTCATCTCAGTTTCACAAATCAAAGACTCTCGACAACAAATATATGCTGGGAGATGAAATTGGTAAAGGAGCTTATGGTCGAGTTTATAAAGGATTAGACTTGGAGAATGGTGACTTTGTGGCCATTAAACAAGTCTCTTTGGAAAATATTGTTCAAGAGGATCTTAACACCATTATGCAAGAAATTGATCTTTTGAAGAACTTGAACCATAAAAACATTGTGAAGTATCTTGGGTCGTCGAAGACAAAGACTCACCTTCACATTATTTTGGAGTACGTTGAGAATGGCTCTCTTGCAAACATTATTAAACCAAATAAATTTGGACCTTTCCCAGAATCTTTGGTGGCTGTTTACATTGCTCAGGTCTTGGAAGGTTTGGTATATCTGCATGAGCAGGGTGTTATACACCGTGATATTAAGGGTGCAAATATTTTGACGACAAAGGAGGGTCTTGTGAAGCTTGCTGACTTTGGAGTTGCCACTAAACTTAACGAGGCTGATGTTAATACTCACTCGGTGGTTGGAACTCCTTACTGGATGGCTCCTGAGGTTATTGAAATGTCAGGAGTTTGTGCTGCTTCTGACATTTGGAGCGTTGGATGCACTGTTATCGAACTTCTGACATGTGTACCTCCTTACTATGATCTGCAACCCATGCCAGCCCTCTTTCGTATTGTTCAGGATGACAACCCTCCTATTCCTGATAGTCTTTCTCCAGATATTACGGACTTTCTACGACAGTGCTTCAAGAAGGATTCCAGGCAGAGGCCTGATGCAAAGACACTGCTCTCTCACCCTTGGATACGAAACTCTAGACGAGCTTTGCAGTCATCACTTCGGCATAGTGGCACCATCAAATATATGAAGGAAGCCACTGCAAGTTCAGAGAAGGATGATGAAGGTAGTCAAGATGCAGCAGAAAGCCTTTCAGGAGAAAATGTGGGAATATCAAAAACTGACTCGAAAAGCAAATTACCTCTGGTAGGGGTGTCGAGTTTTAGGTCTGAGAAAGATCAGTCGACACCCAGTGATCTTGGTGAAGAAGGAACAGATAATTCAGAAGATGATATTATGTCAGATCAAGTTCCTACACTGTCGATCCATGAGAAATCTTCGGATGCTAAGGGGACACCTCAAGATGTATCAGACTTTCATGGGAAATCTGAACGTGGTGAAACACCTGAAAATCTTGTAACGGAAACTTCTGAAGCTAGAAAAAATACTTCAGCAATAAAGCACGTTGGCAAAGAATTATCCATCCCAGTGGACCAGACATCACATAGTTTTGGCCGCAAAGGTGAAGAACGTGGGATTCGAAAGGCTGTGAAGACTCCATCTAGTGTTAGTGGGAATGAACTGGCTAGGTTTAGTGATCCTCCTGGGGATGCTTCTTTGCATGATTTATTTCACCCATTGGATAAAGTGTCTGAGGGAAAACCAAATGAAGCCTCAACATCCATGCCTACGTCAAATGTCAACCAAGGTGATTCTCCTGTTGCAGATGGTGGAAAGAATGATCTGGCTACAAAATTGAGGGCTACAATTGCTCAGAAGCAAATGGAGGGGGAAACAGGGCACTCAAATGATGGTGGTGATCTTTTTCGCTTGATGATGGGTGTTTTGAAAGATGATGTTATTGACATTGATGGCTTGGTATTTGATGAAAAAGTGCCCGCGGAGAATCTTTTTCCTCTGCAGGCAGTCGAGTTCAGCAGACTGGTCAGCTCCTTGAGGCCAGATGAGTCAGAAGATGCAATAGTATCTTCTTGTCAGAAACTTGTTGCCATGTTTCGTCAGAGACCTGAGCAGAAAGTAGTATTTGTGACACAGCATGGTTTCCTGCCTCTAATGGATCTACTCGATATTCCTAAATCTCGAGTAATATGTGCTGTGCTGCAGCTGATAAACGAAATTATTAAAGATAACACTGACTTCCAGGAAAATGCTTGTCTTGTTGGCCTTATTCCTGTTGTAATGAGTTTTGCTGGTCCTGAGAGGGATCGTTCTCGCGAAATTCGTAAAGAAGCAGCTTACTTCTTGCAGCAGCTTTGTCAGTCAAGCCCCTTGACGTTGCAAATGTTCATAGCTTGCCGTGGAATACCCGTTTTGGTGGGATTTCTTGAAGCAGATTATGCCAAATACAGGGAGATGGTTCACTTGGCTATTGATGGGATGTGGCAGGTATTTAAACTCAAAAGATCCACCCCAAGAAATGATTTCTGCCGTATAGCTGCAAAGAATGGAATTCTTCTGAGGCTAATCAACACTCTTTATAGCTTGAATGAGGCAACCCGGCTGGCTTCTATATCAGGGGGCCTGGATGGTCAAGCTCCACGAGTGCGCTCTGGTCAACTTGACCCTAACAATCCTATTTTTGGTCAAAATGAGACTTCTTCACTCAGTATGATTGATCAGCCTGATGTATTGAAAACTAGGCATGGGGGTGGTGAAGAGCCTTCTCATGCTTCAACCTCAAATTCTCAAAGATCAGATGTCCATCAACCAGATGCTTTGCACCCAGATGGTGATAAGCCTAGAGTAAGCAGTGTTGCACCAGATGCCTCAACCTCTGGCACAGAAGATGTTAGACAACAGCATCGAATATCTCTTTCCGCCAATAGGACATCGACAGATAAGCTTCAGAAGCTGGCAGAGGGCGCCTCTAATGGTTTTCCTGTTACTCAGACAGAACAAGTTCGACCTTTGCTTAGCTTGTTGGATAAAGAACCCCCTTCAAGACATTATTCTGGTCAACTGGATTATGTTAAGCATATCACTGGCATAGAGAGACATGAAAGTAGACTTCCTCTTTTGCATGGATCAAATGAAAAGAAAAACAACGGAGACCTAGATTTTCTGATGGCTGAATTTGCAGAGGTCTCTGGACGTGGAAAGGAAAATGGAAGTCTTGATACTACGACTAGATATCCCAGTAAAACAATGACAAAGAAGGTTCTGGCTATTGAAGGAGTTGCTTCAACATCTGGGATTGCATCTCAGACAGCATCTGGAGTACTGTCAGGTTCGGGTGTTCTAAACGCTAGACCTGGAAGTGCCACATCATCTGGTTTACTTGCCCATATGGTCTCTACGCTGAGTGCAGATGTTGCAAGGGAATACTTGGAGAAAGTTGCTGACCTGCTTCTTGAATTTGCTCGAGCTGATACGACAGTAAAGTCATATATGTGCAGCCAAAGCTTACTCAGTCGTCTTTTTCAGATGTTCAACCGTGTAGAACCTCCTATTCTGTTAAAGATACTGGAGTGCACAAATCATTTATCAACTGATCCAAATTGCTTGGAGAATCTGCAGCGTGCAGATGCAATTAAGCATTTGATCCCCAACCTTGAGCTTAAGGATGGGCATCTTGTTTATCAGATCCATCATGAGGTGCTTAGTGCACTATTCAACCTGTGCAAGATAAACAAGAGGAGGCAGGAACAAGCGGCTGAAAACGGAATCATTCCGCATCTGATGCTTTTCATTATGTCAGATTCTCCTCTGAAACAGTATGCATTGCCACTACTCTGCGATATGGCTCATGCATCTCGAAATTCAAGAGAACAGTTAAGGGCCCACGGTGGTCTTGATGTTTACCTGAGTTTACTCGATGATGAATACTGGTCCGTGATAGCCTTAGATTCAATCGCTGTTTGCTTGGCGCAAGACAATGACAACCGCAAGGTAGAGCAGGCATTGCTCAAGCAAGATGCAATTCAGAAATTAGTTGACTTCTTCCAGAGCTGCCCAGAGAGACACTTCGTGCACATATTGGAGCCATTCTTAAAGATTATCACGAAATCATATCGGATCAATAAGACATTAGCTGTAAATGGATTGACTCCACTGCTTATTTCAAGGCTAGACCATCAAGATGCGATTGCTCGACTTAACCTCCTAAAACTCATCAAGGCTGTTTATGAACATCATCCACGGCCGAAACAGCTGATCGTAGAGAACGACCTTCCTCAAAAACTGCAGAATCTAATAGAAGAACGACGAGATGGACAACGTTCAGGAGGCCAAGTTCTGGTGAAACAAATGGCAACATCTCTCCTCAAAGCACTTCACATCAACACAATATTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000278 GO:0000281 GO:0000910 GO:0001558 GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005773 GO:0005813 GO:0005815 GO:0005829 GO:0005856 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007049 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0008361 GO:0009893 GO:0009987 GO:0010324 GO:0010562 GO:0010604 GO:0015630 GO:0016020 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0022402 GO:0022603 GO:0022604 GO:0023014 GO:0023052 GO:0030587 GO:0031098 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032147 GO:0032268 GO:0032270 GO:0032502 GO:0032506 GO:0032535 GO:0033554 GO:0033674 GO:0035556 GO:0036089 GO:0036211 GO:0040008 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0045995 GO:0046777 GO:0048518 GO:0048522 GO:0048638 GO:0048856 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051173 GO:0051174 GO:0051239 GO:0051246 GO:0051247 GO:0051301 GO:0051302 GO:0051338 GO:0051347 GO:0051510 GO:0051703 GO:0051704 GO:0051716 GO:0051726 GO:0060255 GO:0061024 GO:0061387 GO:0061640 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0090066 GO:0090702 GO:0099024 GO:0099120 GO:0140096 GO:1901564 GO:1903047 GO:2000026
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1368

Amino Acids

151.17

Weight (kDa)

6.02

Isoelectric Point (pI)

42.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 21 - 274 5e-74 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 22 - 270 5.2e-51 Protein tyrosine and serine/threonine kinase
ARM_ARMC5 PF24768 1035 - 1213 1.6e-07 ARMC5
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 105
AasI GACNNNNNNGTC 1 cut(s) 3193
AatII GACGTC 1 cut(s) 20
Acc36I ACCTGC 2 cut(s) 2188, 3165
AccB1I GGYRCC 2 cut(s) 866, 2675
AccB7I CCANNNNNTGG 1 cut(s) 4048
AccI GTMKAC 2 cut(s) 1037, 2818
AccII CGCG 3 cut(s) 7, 1694, 2028
AciI CCGC 8 cut(s) 7, 1309, 1692, 1694, 2631, 3464, 3485, 3697
AclI AACGTT 1 cut(s) 4030
AcoI YGGCCR 3 cut(s) 138, 1306, 3953
AcsI RAATTY 7 cut(s) 335, 2031, 2262, 2494, 2885, 3167, 3571
AcuI CTGAAG 3 cut(s) 1227, 1245, 2642
AcyI GRCGYC 2 cut(s) 17, 2676
AdeI CACNNNGTG 3 cut(s) 535, 1046, 3781
AfaI GTAC 3 cut(s) 293, 648, 3033
AfiI CCNNNNNNNGG 7 cut(s) 783, 1001, 2160, 2393, 2637, 3406, 4048
AflII CTTAAG 1 cut(s) 3371
AflIII ACRYGT 1 cut(s) 641
AjiI CACGTC 1 cut(s) 2906
AjnI CCWGG 5 cut(s) 776, 1396, 1953, 2334, 3064
AloI GAACNNNNNNTCC 2 cut(s) 4029, 4061
Alw21I GWGCWC 3 cut(s) 3287, 3421, 3786
Alw26I GTCTC 8 cut(s) 157, 1810, 2399, 2800, 2856, 2902, 3109, 3766
Alw44I GTGCAC 3 cut(s) 3283, 3417, 3782
AlwNI CAGNNNCTG 2 cut(s) 2665, 3026
Ama87I CYCGRG 2 cut(s) 1893, 3174
AoxI GGCC 9 cut(s) 138, 785, 1306, 1751, 1975, 2332, 3591, 3953, 4039
ApaI GGGCCC 1 cut(s) 3595
ApaLI GTGCAC 3 cut(s) 3283, 3417, 3782
ApoI RAATTY 7 cut(s) 335, 2031, 2262, 2494, 2885, 3167, 3571
Asp700I GAANNNNTTC 1 cut(s) 2712
AspLEI GCGC 4 cut(s) 7, 2361, 2678, 3682
AspS9I GGNCC 7 cut(s) 341, 1285, 2006, 2332, 3591, 3592, 3642
AsuC2I CCSGG 1 cut(s) 2311
AsuII TTCGAA 1 cut(s) 1333
AvaI CYCGRG 2 cut(s) 1893, 3174
AvaII GGWCC 4 cut(s) 341, 1285, 2006, 3642
AxyI CCTNAGG 1 cut(s) 564
BaeGI GKGCMC 6 cut(s) 1596, 1692, 3287, 3421, 3595, 3786
BaeI ACNNNNGTAYC 6 cut(s) 630, 663, 3174, 3207, 3266, 3299
BalI TGGCCA 1 cut(s) 140
BanI GGYRCC 2 cut(s) 866, 2675
BanII GRGCYC 1 cut(s) 3595
BarI GAAGNNNNNNTAC 2 cut(s) 2914, 2946
BauI CACGAG 1 cut(s) 2352
BbsI GAAGAC 2 cut(s) 266, 1352
Bbv12I GWGCWC 3 cut(s) 3287, 3421, 3786
BceAI ACGGC 3 cut(s) 2094, 2226, 3968
BcgI CGANNNNNNTGC 2 cut(s) 610, 644
BciT130I CCWGG 5 cut(s) 778, 1398, 1955, 2336, 3066
BciVI GTATCC 1 cut(s) 813
BclI TGATCA 1 cut(s) 2428
BcnI CCSGG 1 cut(s) 2311
BcoDI GTCTC 8 cut(s) 157, 1810, 2399, 2800, 2856, 2902, 3109, 3766
BfmI CTRYAG 4 cut(s) 1712, 1913, 3326, 3995
BfoI RGCGCY 1 cut(s) 2679
BfrI CTTAAG 1 cut(s) 3371
BfuAI ACCTGC 2 cut(s) 2188, 3165
BfuI GTATCC 1 cut(s) 813
BlpI GCTNAGC 1 cut(s) 2726
BmcAI AGTACT 1 cut(s) 3033
Bme1390I CCNGG 6 cut(s) 778, 1398, 1955, 2311, 2336, 3066
Bme18I GGWCC 4 cut(s) 341, 1285, 2006, 3642
BmeT110I CYCGRG 2 cut(s) 1893, 3174
BmgBI CACGTC 1 cut(s) 2906
BmgT120I GGNCC 7 cut(s) 341, 1285, 2006, 2332, 3591, 3592, 3642
BmiI GGNNCC 6 cut(s) 561, 868, 2333, 2677, 3593, 3795
BmrFI CCNGG 6 cut(s) 778, 1398, 1955, 2311, 2336, 3066
BmrI ACTGGG 3 cut(s) 1038, 1274, 2943
BmuI ACTGGG 3 cut(s) 1038, 1274, 2943
BpiI GAAGAC 2 cut(s) 266, 1352
BplI GAGNNNNNCTC 4 cut(s) 290, 322, 2663, 2695
BpmI CTGGAG 3 cut(s) 717, 3048, 3299
Bpu10I CCTNAGC 3 cut(s) 378, 1140, 1821
Bpu1102I GCTNAGC 1 cut(s) 2726
Bpu14I TTCGAA 1 cut(s) 1333
BpuEI CTTGAG 4 cut(s) 1137, 1768, 3386, 3704
BpuMI CCSGG 1 cut(s) 2311
BsaBI GATNNNNATC 2 cut(s) 2514, 3381
BsaHI GRCGYC 2 cut(s) 17, 2676
BsaI GGTCTC 4 cut(s) 1810, 2856, 2902, 3109
BsaJI CCNNGG 7 cut(s) 815, 1397, 1498, 1692, 2110, 3595, 3950
BsaXI ACNNNNNCTCC 6 cut(s) 942, 972, 3897, 3927, 4029, 4059
Bsc4I CCNNNNNNNGG 7 cut(s) 783, 1001, 2160, 2393, 2637, 3406, 4048
Bse21I CCTNAGG 1 cut(s) 564
Bse3DI GCAATG 3 cut(s) 372, 3533, 3713
Bse8I GATNNNNATC 2 cut(s) 2514, 3381
BseBI CCWGG 5 cut(s) 778, 1398, 1955, 2336, 3066
BseDI CCNNGG 7 cut(s) 815, 1397, 1498, 1692, 2110, 3595, 3950
BseJI GATNNNNATC 2 cut(s) 2514, 3381
BseLI CCNNNNNNNGG 7 cut(s) 783, 1001, 2160, 2393, 2637, 3406, 4048
BseMI GCAATG 3 cut(s) 372, 3533, 3713
BseRI GAGGAG 3 cut(s) 3463, 3507, 4064
BseSI GKGCMC 6 cut(s) 1596, 1692, 3287, 3421, 3595, 3786
BseX3I CGGCCG 1 cut(s) 3953
BseYI CCCAGC 1 cut(s) 64
BsgI GTGCAG 3 cut(s) 3138, 3226, 3354
Bsh1236I CGCG 3 cut(s) 7, 1694, 2028
Bsh1285I CGRYCG 1 cut(s) 3956
BshFI GGCC 9 cut(s) 140, 787, 1308, 1753, 1977, 2334, 3593, 3955, 4041
BshNI GGYRCC 2 cut(s) 866, 2675
BsiEI CGRYCG 1 cut(s) 3956
BsiHKAI GWGCWC 3 cut(s) 3287, 3421, 3786
BsiHKCI CYCGRG 2 cut(s) 1893, 3174
BsiSI CCGG 1 cut(s) 2311
BslFI GGGAC 1 cut(s) 1159
BslI CCNNNNNNNGG 7 cut(s) 783, 1001, 2160, 2393, 2637, 3406, 4048
BsmAI GTCTC 8 cut(s) 157, 1810, 2399, 2800, 2856, 2902, 3109, 3766
BsmFI GGGAC 1 cut(s) 1159
BsnI GGCC 9 cut(s) 140, 787, 1308, 1753, 1977, 2334, 3593, 3955, 4041
Bso31I GGTCTC 4 cut(s) 1810, 2856, 2902, 3109
BsoBI CYCGRG 2 cut(s) 1893, 3174
Bsp119I TTCGAA 1 cut(s) 1333
Bsp120I GGGCCC 1 cut(s) 3591
Bsp1286I GDGCHC 6 cut(s) 1596, 1692, 3287, 3421, 3595, 3786
Bsp1720I GCTNAGC 1 cut(s) 2726
Bsp68I TCGCGA 1 cut(s) 2028
BspACI CCGC 8 cut(s) 7, 1309, 1692, 1694, 2631, 3464, 3485, 3697
BspANI GGCC 9 cut(s) 140, 787, 1308, 1753, 1977, 2334, 3593, 3955, 4041
BspFNI CGCG 3 cut(s) 7, 1694, 2028
BspHI TCATGA 1 cut(s) 3403
BspLI GGNNCC 6 cut(s) 561, 868, 2333, 2677, 3593, 3795
BspMAI CTGCAG 4 cut(s) 1716, 1917, 3330, 3999
BspMI ACCTGC 2 cut(s) 2188, 3165
BspQI GCTCTTC 1 cut(s) 2463
BspT104I TTCGAA 1 cut(s) 1333
BspT107I GGYRCC 2 cut(s) 866, 2675
BspTI CTTAAG 1 cut(s) 3371
BspTNI GGTCTC 4 cut(s) 1810, 2856, 2902, 3109
BsrDI GCAATG 3 cut(s) 372, 3533, 3713
BssECI CCNNGG 7 cut(s) 815, 1397, 1498, 1692, 2110, 3595, 3950
BssNI GRCGYC 2 cut(s) 17, 2676
BssSI CACGAG 1 cut(s) 2352
BssT1I CCWWGG 2 cut(s) 815, 1498
Bst2BI CACGAG 1 cut(s) 2352
Bst2UI CCWGG 5 cut(s) 778, 1398, 1955, 2336, 3066
Bst6I CTCTTC 1 cut(s) 2463
BstACI GRCGYC 2 cut(s) 17, 2676
BstAFI CTTAAG 1 cut(s) 3371
BstAPI GCANNNNNTGC 6 cut(s) 673, 2150, 2576, 3125, 3493, 3715
BstBI TTCGAA 1 cut(s) 1333
BstC8I GCNNGC 9 cut(s) 480, 678, 1692, 1716, 2107, 2316, 2667, 3333, 3711
BstDSI CCRYGG 4 cut(s) 1692, 2110, 3595, 3950
BstENI CCTNNNNNAGG 1 cut(s) 999
BstFNI CGCG 3 cut(s) 7, 1694, 2028
BstH2I RGCGCY 1 cut(s) 2679
BstHHI GCGC 4 cut(s) 7, 2361, 2678, 3682
BstMAI GTCTC 8 cut(s) 157, 1810, 2399, 2800, 2856, 2902, 3109, 3766
BstMCI CGRYCG 1 cut(s) 3956
BstNI CCWGG 5 cut(s) 778, 1398, 1955, 2336, 3066
BstNSI RCATGY 1 cut(s) 645
BstSCI CCNGG 6 cut(s) 776, 1396, 1953, 2309, 2334, 3064
BstSFI CTRYAG 4 cut(s) 1712, 1913, 3326, 3995
BstSLI GKGCMC 6 cut(s) 1596, 1692, 3287, 3421, 3595, 3786
BstUI CGCG 3 cut(s) 7, 1694, 2028
BstV2I GAAGAC 2 cut(s) 266, 1352
BstX2I RGATCY 4 cut(s) 178, 1870, 2216, 3396
BstXI CCANNNNNNTGG 1 cut(s) 1282
BstYI RGATCY 4 cut(s) 178, 1870, 2216, 3396
BstZI CGGCCG 1 cut(s) 3953
Bsu36I CCTNAGG 1 cut(s) 564
BsuI GTATCC 1 cut(s) 813
BsuRI GGCC 9 cut(s) 140, 787, 1308, 1753, 1977, 2334, 3593, 3955, 4041
BtgI CCRYGG 4 cut(s) 1692, 2110, 3595, 3950
BtrI CACGTC 1 cut(s) 2906
BtsI GCAGTG 4 cut(s) 800, 891, 2569, 3863
BtuMI TCGCGA 1 cut(s) 2028
BveI ACCTGC 2 cut(s) 2188, 3165
Cac8I GCNNGC 9 cut(s) 480, 678, 1692, 1716, 2107, 2316, 2667, 3333, 3711
CaiI CAGNNNCTG 2 cut(s) 2665, 3026
CciI TCATGA 1 cut(s) 3403
CfoI GCGC 4 cut(s) 7, 2361, 2678, 3682
Cfr13I GGNCC 7 cut(s) 341, 1285, 2006, 2332, 3591, 3592, 3642
Cfr42I CCGCGG 1 cut(s) 1695
Csp6I GTAC 3 cut(s) 292, 647, 3032
CviQI GTAC 3 cut(s) 292, 647, 3032
DinI GGCGCC 1 cut(s) 2677
DraI TTTAAA 1 cut(s) 2206
DraIII CACNNNGTG 3 cut(s) 535, 1046, 3781
DrdI GACNNNNNNGTC 1 cut(s) 3193
DseDI GACNNNNNNGTC 1 cut(s) 3193
EaeI YGGCCR 3 cut(s) 138, 1306, 3953
EagI CGGCCG 1 cut(s) 3953
Eam1104I CTCTTC 1 cut(s) 2463
EarI CTCTTC 1 cut(s) 2463
EciI GGCGGA 1 cut(s) 2620
EclXI CGGCCG 1 cut(s) 3953
Eco130I CCWWGG 2 cut(s) 815, 1498
Eco147I AGGCCT 1 cut(s) 787
Eco24I GRGCYC 1 cut(s) 3595
Eco31I GGTCTC 4 cut(s) 1810, 2856, 2902, 3109
Eco32I GATATC 1 cut(s) 2945
Eco47I GGWCC 4 cut(s) 341, 1285, 2006, 3642
Eco52I CGGCCG 1 cut(s) 3953
Eco57I CTGAAG 3 cut(s) 1227, 1245, 2642
Eco81I CCTNAGG 1 cut(s) 564
Eco88I CYCGRG 2 cut(s) 1893, 3174
EcoNI CCTNNNNNAGG 1 cut(s) 999
EcoO109I RGGNCCY 2 cut(s) 2332, 3591
EcoRI GAATTC 1 cut(s) 2262
EcoRII CCWGG 5 cut(s) 776, 1396, 1953, 2334, 3064
EcoRV GATATC 1 cut(s) 2945
EcoT14I CCWWGG 2 cut(s) 815, 1498
EcoT22I ATGCAT 2 cut(s) 3535, 3565
EcoT38I GRGCYC 1 cut(s) 3595
EgeI GGCGCC 1 cut(s) 2677
EheI GGCGCC 1 cut(s) 2677
ErhI CCWWGG 2 cut(s) 815, 1498
FalI AAGNNNNNCTT 2 cut(s) 165, 197
FaqI GGGAC 1 cut(s) 1159
FauI CCCGC 1 cut(s) 1699
FauNDI CATATG 1 cut(s) 3099
FbaI TGATCA 1 cut(s) 2428
FblI GTMKAC 2 cut(s) 1037, 2818
FriOI GRGCYC 1 cut(s) 3595
GlaI GCGC 4 cut(s) 6, 2360, 2677, 3681
GsaI CCCAGC 1 cut(s) 68
GsuI CTGGAG 3 cut(s) 717, 3048, 3299
HaeII RGCGCY 1 cut(s) 2679
HaeIII GGCC 9 cut(s) 140, 787, 1308, 1753, 1977, 2334, 3593, 3955, 4041
HapII CCGG 1 cut(s) 2311
HhaI GCGC 4 cut(s) 7, 2361, 2678, 3682
Hin1I GRCGYC 2 cut(s) 17, 2676
Hin6I GCGC 4 cut(s) 5, 2359, 2676, 3680
HinP1I GCGC 4 cut(s) 5, 2359, 2676, 3680
HincII GTYRAC 5 cut(s) 1038, 1495, 2369, 2771, 3748
HindII GTYRAC 5 cut(s) 1038, 1495, 2369, 2771, 3748
HindIII AAGCTT 3 cut(s) 476, 2654, 3214
HpaII CCGG 1 cut(s) 2311
Hpy99I CGWCG 2 cut(s) 259, 4020
HpyCH4IV ACGT 9 cut(s) 17, 294, 1186, 1257, 1324, 1484, 2087, 2905, 4030
HpySE526I ACGT 9 cut(s) 17, 294, 1186, 1257, 1324, 1484, 2087, 2905, 4030
Hsp92I GRCGYC 2 cut(s) 17, 2676
HspAI GCGC 4 cut(s) 5, 2359, 2676, 3680
KasI GGCGCC 1 cut(s) 2675
Ksp22I TGATCA 1 cut(s) 2428
KspI CCGCGG 1 cut(s) 1695
LguI GCTCTTC 1 cut(s) 2463
LmnI GCTCC 6 cut(s) 86, 565, 609, 1748, 2353, 3793
MaeII ACGT 9 cut(s) 17, 294, 1186, 1257, 1324, 1484, 2087, 2905, 4030
MaeIII GTNAC 4 cut(s) 128, 1210, 1840, 2695
MfeI CAATTG 1 cut(s) 1560
MflI RGATCY 4 cut(s) 178, 1870, 2216, 3396
MhlI GDGCHC 6 cut(s) 1596, 1692, 3287, 3421, 3595, 3786
MlsI TGGCCA 1 cut(s) 140
MluNI TGGCCA 1 cut(s) 140
Mly113I GGCGCC 1 cut(s) 2676
MlyI GAGTC 6 cut(s) 37, 262, 971, 1342, 1769, 3853
MmeI TCCRAC 3 cut(s) 520, 595, 2715
Mox20I TGGCCA 1 cut(s) 140
Mph1103I ATGCAT 2 cut(s) 3535, 3565
MroXI GAANNNNTTC 1 cut(s) 2712
MscI TGGCCA 1 cut(s) 140
MslI CAYNNNNRTG 7 cut(s) 191, 1280, 1599, 2460, 2538, 3202, 3891
Msp20I TGGCCA 1 cut(s) 140
MspA1I CMGCKG 3 cut(s) 1694, 1918, 3964
MspCI CTTAAG 1 cut(s) 3371
MspI CCGG 1 cut(s) 2311
MspR9I CCNGG 6 cut(s) 778, 1398, 1955, 2311, 2336, 3066
MunI CAATTG 1 cut(s) 1560
MvaI CCWGG 5 cut(s) 778, 1398, 1955, 2336, 3066
MvnI CGCG 3 cut(s) 7, 1694, 2028
NarI GGCGCC 1 cut(s) 2676
NciI CCSGG 1 cut(s) 2311
NdeI CATATG 1 cut(s) 3099
NlaIV GGNNCC 6 cut(s) 561, 868, 2333, 2677, 3593, 3795
NmuCI GTSAC 2 cut(s) 128, 1840
NruI TCGCGA 1 cut(s) 2028
NsiI ATGCAT 2 cut(s) 3535, 3565
NspI RCATGY 1 cut(s) 645
NspV TTCGAA 1 cut(s) 1333
PaeR7I CTCGAG 2 cut(s) 1893, 3174
PagI TCATGA 1 cut(s) 3403
PceI AGGCCT 1 cut(s) 787
PciI ACATGT 1 cut(s) 641
PciSI GCTCTTC 1 cut(s) 2463
PcsI WCGNNNNNNNCGW 3 cut(s) 1330, 2032, 3975
PdmI GAANNNNTTC 1 cut(s) 2712
PflMI CCANNNNNTGG 1 cut(s) 4048
PfoI TCCNGGA 1 cut(s) 1953
PleI GAGTC 6 cut(s) 37, 262, 971, 1342, 1768, 3853
PluTI GGCGCC 1 cut(s) 2679
PpsI GAGTC 6 cut(s) 37, 262, 971, 1342, 1768, 3853
PscI ACATGT 1 cut(s) 641
PsiI TTATAA 1 cut(s) 105
Psp1406I AACGTT 1 cut(s) 4030
Psp6I CCWGG 5 cut(s) 776, 1396, 1953, 2334, 3064
PspFI CCCAGC 1 cut(s) 64
PspGI CCWGG 5 cut(s) 776, 1396, 1953, 2334, 3064
PspN4I GGNNCC 6 cut(s) 561, 868, 2333, 2677, 3593, 3795
PspOMI GGGCCC 1 cut(s) 3591
PspPI GGNCC 7 cut(s) 341, 1285, 2006, 2332, 3591, 3592, 3642
PspXI VCTCGAGB 1 cut(s) 3174
PstI CTGCAG 4 cut(s) 1716, 1917, 3330, 3999
PstNI CAGNNNCTG 2 cut(s) 2665, 3026
PsuI RGATCY 4 cut(s) 178, 1870, 2216, 3396
PvuII CAGCTG 2 cut(s) 1918, 3964
RruI TCGCGA 1 cut(s) 2028
RsaI GTAC 3 cut(s) 293, 648, 3033
RsaNI GTAC 3 cut(s) 292, 647, 3032
RseI CAYNNNNRTG 7 cut(s) 191, 1280, 1599, 2460, 2538, 3202, 3891
SacII CCGCGG 1 cut(s) 1695
SalI GTCGAC 1 cut(s) 1036
SapI GCTCTTC 1 cut(s) 2463
Sau96I GGNCC 7 cut(s) 341, 1285, 2006, 2332, 3591, 3592, 3642
ScaI AGTACT 1 cut(s) 3033
SchI GAGTC 6 cut(s) 37, 262, 971, 1342, 1769, 3853
ScrFI CCNGG 6 cut(s) 778, 1398, 1955, 2311, 2336, 3066
SduI GDGCHC 6 cut(s) 1596, 1692, 3287, 3421, 3595, 3786
SfcI CTRYAG 4 cut(s) 1712, 1913, 3326, 3995
SfoI GGCGCC 1 cut(s) 2677
Sfr274I CTCGAG 2 cut(s) 1893, 3174
Sfr303I CCGCGG 1 cut(s) 1695
SfuI TTCGAA 1 cut(s) 1333
SgrBI CCGCGG 1 cut(s) 1695
SinI GGWCC 4 cut(s) 341, 1285, 2006, 3642
SlaI CTCGAG 2 cut(s) 1893, 3174
SmiMI CAYNNNNRTG 7 cut(s) 191, 1280, 1599, 2460, 2538, 3202, 3891
SmlI CTYRAG 7 cut(s) 1152, 1747, 1893, 3174, 3365, 3371, 3719
SmoI CTYRAG 7 cut(s) 1152, 1747, 1893, 3174, 3365, 3371, 3719
SseBI AGGCCT 1 cut(s) 787
SsiI CCGC 8 cut(s) 7, 1309, 1692, 1694, 2631, 3464, 3485, 3697
SspDI GGCGCC 1 cut(s) 2675
SspI AATATT 3 cut(s) 166, 448, 4101
StuI AGGCCT 1 cut(s) 787
StyD4I CCNGG 6 cut(s) 776, 1396, 1953, 2309, 2334, 3064
StyI CCWWGG 2 cut(s) 815, 1498
TaiI ACGT 9 cut(s) 20, 297, 1189, 1260, 1327, 1487, 2090, 2908, 4033
TatI WGTACW 1 cut(s) 3031
TauI GCSGC 3 cut(s) 10, 1311, 3467
TseFI GTSAC 2 cut(s) 128, 1840
Tsp45I GTSAC 2 cut(s) 128, 1840
TspGWI ACGGA 5 cut(s) 758, 1229, 2874, 3489, 3634
Van91I CCANNNNNTGG 1 cut(s) 4048
Vha464I CTTAAG 1 cut(s) 3371
VneI GTGCAC 3 cut(s) 3283, 3417, 3782
VpaK11BI GGWCC 4 cut(s) 341, 1285, 2006, 3642
XagI CCTNNNNNAGG 1 cut(s) 999
XapI RAATTY 7 cut(s) 335, 2031, 2262, 2494, 2885, 3167, 3571
XbaI TCTAGA 1 cut(s) 830
XceI RCATGY 1 cut(s) 645
XhoI CTCGAG 2 cut(s) 1893, 3174
XmiI GTMKAC 2 cut(s) 1037, 2818
XmnI GAANNNNTTC 1 cut(s) 2712
ZraI GACGTC 1 cut(s) 18
ZrmI AGTACT 1 cut(s) 3033
Zsp2I ATGCAT 2 cut(s) 3535, 3565
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.