Rw4G037070

Serine threonine-protein kinase sepA-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
Physical Location & Seq
Forward (+)
63793662 .. 63804981
11320 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G037070.1

Sequence Viewer

Length: 4218 bp
ATGTCTCGGCAGGCGGCGTCGGCCCACTTCCACAAATCCAAGACTCTCGATAACAAATACATGCTTGGAGATGAGATTGGAAAGGGAGCATATGGTCGAGTTTACAAGGGCTTGGATTTGGAGAATGGAGACTTTGTTGCAATTAAACAGGTTTCGTTGGAGAATATTGCACAGGAGGATCTCAACGTTATAATGCAAGAGATTGATTTACTCAAGAATTTAAATCACAAAAACATTGTGAAATATCTTGGATCCTTAAAGACAAGGACACATCTTCACATAGTCCTAGAATATGTGGAGAATGGCTCACTTGCAAACATTATTAAGCCAAATAAGTTTGGACCTTTTCCAGAATCACTGGTAGCTGTGTACATTGCTCAGGTTTTGGAAGGCTTGGTGTATTTACATGAACAGGGTGTAATCCATCGGGATATCAAGGGTGCAAATATATTGACAACTAAAGAGGGCCTTGTGAAACTTGCTGATTTTGGTGTTGCTACAAAATTGACCGAGGCTGATGTGAATACACATTCAGTTGTTGGAACGCCATATTGGATGGCCCCAGAGGTGATTGAAATGTCGGGGGTTTGTGCTGCTTCAGATATTTGGAGTGTTGGCTGCACTGTTATTGAACTTCTTACATGTGTACCTCCTTATTATGATTTACAGCCAATGCCAGCACTATTTCGTATTGTTCAGGATGAACATCCTCCAATTCCTGACAGTCTATCTCCTGACATTACTGATTTTCTGTGTCAATGCTTTAAAAAGGATGCTAGGCACCGGCCTGATGCAAAAACACTGTTATCTCATCCTTGGATACAAAACTGCAGGCGAGTGTTGCAATCATCTATTCGTCACAGTGGAACATTAAGAGATATACAGGAAGATGTTTCTAAGGGTGCAGAACTCTCCAATGGAGATATTCGGAGCTCTGGCGAAAGTCCGGCAGAGAAAACAGAAGAGCAGCTTCTGCTATTAAAGCAGAAAGAGTTATTATCAACCGGGGTTTCTGATATGAGAAAATCTGGCGAGGATCCTGCTTCAGATGTGAAATTTGTTGAGGAAAAAGCAGATGCTTTAGAAAATGATCTGACAGATCAGGCTCCCACCTTAGCCATACATGAAAAATCATCTTTGCCAAATGGTTCTGGCAGAATATCTTCTAATAAAGAATTGTCTGCCTCCGAGCCAGCTGAGCTTGATGATCGAGCACATACGGCCAACGATGATGAACCACCGATGAATGGGGAGGTTAAATCTCCTGAATTAACGACAAATAGTGTAACTGGGAAACATGGAAAAGGGAATTCTATTGGGTTTAGACCATTTGGTTTTGGAGCAAGAAATCAGGATGGTGCTTTTCAAAAGGCTGCAAAGATGCCAGTCGGTTTGGAAGGGAATGAACTCAGTAAATTTAGTGACACTCCAGGAGATGCTTCCTTGGATGATCTATTTCATCCATTGGATAAGCATCCCGATGGTAGGGCAACTGAAGCTTCAACATCTTCTTCAATTTCACATTTGAACCAAGGAAATACATCTGTAAACGATGCTGGGAAAAGTGACCTGGCTATGAAATTAAGGGCTACAATTGCTCAGAAGCAAATGGAGAGTGAAATGGGTCAGGCTAATGGTAGTGGTGGTAACCTGTTACAGCTGATGATGGGTGTTCTCCAAGATGATGTGATTGATATTGGTGGTTTGGTATTTGATGAAAAGTTGCCCGGAGAAAACCTTTTTCCCCTACAGGCTGTTGAGTTTAGCCGGTTGGTTGGATCATTGAAACTAGATGAATCAGAAGATGTTGTTGTCTCTGCCTGCCAGAAACTTATTGCTATATTCCATCAGCGTCCAGAGCAGAAAATTGTTTTTGTCACACAGCATGGTTTGCTCCCTTTAATGGAATTGCTTGAAGTTAATAAAACTCGAGTTATATGTTCTGTGCTTCAAATCATAAACCAGATAATCAAAGACAACACTGATTTCCAGGAAAATGCTTGTCATGTTGGTCTGGTGAAAATTCGTATGGAAGCAGCTTATTTCTTGCAGCAGCTTTGTCAGTCAAGCCCATTGACTTTGCAAATGTTCATAGCTTGCCGTGGAATACCTGTTCTGGTGGGCTTTTTAGAGGCTGATTATGCAAAATTCAGGGAAATGGTTCATCTAGCTATTGACGGCATGTGGCAAGTCTTTAAGCTTCAGCGATCAACCCCTAGGAATGATTTCTGTCGCATAGCTGCGAAGAATGGAATACTCCTGAGGCTTATTAACACCCTTTATAGCTTGAATGAGGCAACACGTTTAGCTTCCATTTCTGGTGGGGGTGGATTTCCTCTAGACGGTTCTGCTCAGCGCCCACGGTCTGGTTCATTGGATTCTGGTCATCCCATTTTTGCTCAGAGTGATGGACCACTTCCTGATCATAATGATCACTCTAAGGTTAGGCATGGTGTAAATGATTTGCATTTGTCTAGTGGAACAGAACCTGCACGTGCTTCAACTTCTAATTCTCAAAGGTCAGATGCCAATCAATCAGATCTGCGGTATCATCATCTAGATACTGATAGACCTCAATCTAGCAATGCAGTAGTAGATGCTTCAGTTTCTTCTAAATTGCAAGACCCAACATCCGCAGATAAAGTAGGCAATATTTCAGCGAAGGAACCTTCAACTACTTCTCGAGGAGATCTTGACCTTAGGCAGCAGCGAGCCCCTATATCTCTTCATAGATCATCCACTGATAGATCTCCTAAAATGATGGAAGCTACATCAAATGGCTTATCAACAACAGCACCTACTCAACAGGAGCAAGTTCGACCTCTTCTTAGCTTGTTGGAGAAAGAGCCCCCTTCAAGACACTTTTCTGGTCAGCTCGATTATGTACGCCACCTCCCTGGGTTGGAGAGACATGAAAGTATACTGCCCCTTTTACATGCATCTAATGAAAAGAAAACAAATGGTGAATTAGATTTCCTTATGGCAGAATTTGCAGATGTCTCTCAACGTGGTAGAGAGAAAGGGAATCTTGATTCTACTACTAGAATTCCCCCCAAAACAGTAAATAAGGAGGTGGGAACACTAGCATCTAACAAAGGAGCTGCTTCCACCTCTGGGATAGCATCTCAGACAGCATCAGGGGTGTTGTCTGGTTCCGGTGTTCTAAATGCTAGGCCAGGCAGTGCAACATCATCAGGTTTACTCTCGCACATGGTTTCGACATTGAATGCAGACGTTGCAAGGGAATACCTAGAAAAGGTGGCAGATCTTCTGCTTGAGTTTGCACGAGCAGATACTACTGTAAAATCATACATGTGTAGCCAAAGTTTGCTCAGCCGTCTTTTTCAGATGTTTAATAGGGTGGAGCCCCCAATTCTTTTAAAGATACTAAAGTGTGTCAACCATTTATCAACCGATCCAAACTGCTTAGAGAATCTTCAGCGGGCAGATGCAATCAAATATCTGATTCCAAATCTTGAACTCAAAGAAGGATCTCTTGTATCTCAAATACATCATGAGGTCCTAAATGCCTTGTTCAATCTGTGTAAGATTAACAAGAGGAGACAGGAACAAGCAGCTGAGAATGGAATAATTCCACACTTAATGCACTTTATTGAGTCTAACTCTCCTCTGAAACAATATGCGTTGCCTTTGCTCTGTGATATGGCTCATGCTTCACGTAATTCAAGAGAGCAATTAAGGGCTCATGGTGGGTTGGATGTGTACTTGAGCCTTCTAGAGGATGAGCTTTGGTCTGTGACTGCATTGGATTCAATTGCTGTTTGCTTAGCTCATGACAATGACAACCGGAAGGTAGAACAAGCACTGTTGAAAAAGGATGCAGTTCAGAAATTGGTGAAATTCTTCCAGTGCTGTCCAGAACAGTATTTCGTGCACATATTGGAGCCATTTTTGAAAATTATCACGAAATCGTCTCGAATTAATACGACATTAGCTGTTAATGGTTTGACACCACTGCTTATCACAAGACTTGACCATCAGGATGCTATTGCCCGTCTAAATCTTCTTAAACTGATAAAGGCTGTTTATGAGCACCACCCACGGCCTAAGCAATTGATTGTGGAGAATGATCTGCCTCAGAAGCTTCGGAATCTAATAGAGGAACGCAGAGATGGGCAACGTTCTGGGGGCCAAGTATTGGTGAAACAAATGGCTACCTCCTTGCTGAAAGCACTCCATATTAACACCGTATTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000278 GO:0000281 GO:0000910 GO:0001558 GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005773 GO:0005813 GO:0005815 GO:0005829 GO:0005856 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007049 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0008361 GO:0009893 GO:0009987 GO:0010324 GO:0010562 GO:0010604 GO:0015630 GO:0016020 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0022402 GO:0022603 GO:0022604 GO:0023014 GO:0023052 GO:0030587 GO:0031098 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032147 GO:0032268 GO:0032270 GO:0032502 GO:0032506 GO:0032535 GO:0033554 GO:0033674 GO:0035556 GO:0036089 GO:0036211 GO:0040008 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0045995 GO:0046777 GO:0048518 GO:0048522 GO:0048638 GO:0048856 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051173 GO:0051174 GO:0051239 GO:0051246 GO:0051247 GO:0051301 GO:0051302 GO:0051338 GO:0051347 GO:0051510 GO:0051703 GO:0051704 GO:0051716 GO:0051726 GO:0060255 GO:0061024 GO:0061387 GO:0061640 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0090066 GO:0090702 GO:0099024 GO:0099120 GO:0140096 GO:1901564 GO:1903047 GO:2000026
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1405

Amino Acids

154.59

Weight (kDa)

6.17

Isoelectric Point (pI)

42.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 21 - 274 5.2e-73 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 22 - 270 6.9e-51 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 191
Acc36I ACCTGC 1 cut(s) 2497
AccB1I GGYRCC 1 cut(s) 780
AccB7I CCANNNNNTGG 2 cut(s) 2366, 4159
AccI GTMKAC 1 cut(s) 2920
AciI CCGC 4 cut(s) 14, 2545, 2634, 3442
AclI AACGTT 2 cut(s) 186, 4141
AclWI GGATC 8 cut(s) 186, 246, 259, 1031, 1044, 1786, 3410, 3499
AcoI YGGCCR 1 cut(s) 1221
AcsI RAATTY 9 cut(s) 217, 1055, 1309, 1415, 2022, 2147, 2987, 3045, 3860
AcuI CTGAAG 6 cut(s) 582, 1029, 1515, 2186, 2586, 3422
AcvI CACGTG 1 cut(s) 2495
AcyI GRCGYC 1 cut(s) 17
AfaI GTAC 4 cut(s) 371, 648, 2886, 3725
AflIII ACRYGT 3 cut(s) 641, 2300, 3312
AjnI CCWGG 5 cut(s) 1429, 1569, 1989, 2896, 3175
AjuI GAANNNNNNNTTGG 2 cut(s) 535, 567
AloI GAACNNNNNNTCC 2 cut(s) 2097, 2129
Alw21I GWGCWC 4 cut(s) 935, 1216, 3897, 4056
Alw26I GTCTC 7 cut(s) 9, 123, 1819, 2902, 3004, 3556, 3939
Alw44I GTGCAC 1 cut(s) 3893
AlwI GGATC 8 cut(s) 186, 246, 259, 1031, 1044, 1786, 3410, 3499
AlwNI CAGNNNCTG 2 cut(s) 973, 2489
Ama87I CYCGRG 2 cut(s) 1929, 2682
AoxI GGCC 8 cut(s) 21, 466, 558, 785, 1221, 3173, 4064, 4150
ApaLI GTGCAC 1 cut(s) 3893
ApoI RAATTY 9 cut(s) 217, 1055, 1309, 1415, 2022, 2147, 2987, 3045, 3860
AseI ATTAAT 1 cut(s) 3942
Asp700I GAANNNNTTC 4 cut(s) 1162, 2160, 2225, 3863
AspA2I CCTAGG 1 cut(s) 2216
AspLEI GCGC 1 cut(s) 2358
AspS9I GGNCC 7 cut(s) 22, 341, 466, 559, 2411, 3520, 4150
AsuC2I CCSGG 2 cut(s) 1006, 1728
AsuHPI GGTGA 5 cut(s) 580, 2029, 2975, 3868, 4174
AvaI CYCGRG 2 cut(s) 1929, 2682
AvaII GGWCC 3 cut(s) 341, 2411, 3520
AvrII CCTAGG 1 cut(s) 2216
AxyI CCTNAGG 2 cut(s) 2261, 2699
BaeGI GKGCMC 1 cut(s) 3897
BaeI ACNNNNGTAYC 6 cut(s) 630, 663, 3285, 3318, 3377, 3410
BamHI GGATCC 2 cut(s) 251, 1036
BanI GGYRCC 1 cut(s) 780
BanII GRGCYC 5 cut(s) 935, 2716, 2850, 3369, 3706
BauI CACGAG 1 cut(s) 3285
BbrPI CACGTG 1 cut(s) 2495
Bbv12I GWGCWC 4 cut(s) 935, 1216, 3897, 4056
BceAI ACGGC 5 cut(s) 1236, 2085, 2194, 3321, 4079
BcgI CGANNNNNNTGC 2 cut(s) 1022, 1056
BciT130I CCWGG 5 cut(s) 1431, 1571, 1991, 2898, 3177
BciVI GTATCC 1 cut(s) 813
BclI TGATCA 2 cut(s) 2422, 2431
BcnI CCSGG 2 cut(s) 1006, 1728
BcoDI GTCTC 7 cut(s) 9, 123, 1819, 2902, 3004, 3556, 3939
BfmI CTRYAG 2 cut(s) 829, 1748
BfoI RGCGCY 1 cut(s) 2359
BfuAI ACCTGC 1 cut(s) 2497
BfuI GTATCC 1 cut(s) 813
BglII AGATCT 4 cut(s) 2539, 2689, 2747, 3265
BlnI CCTAGG 1 cut(s) 2216
BlpI GCTNAGC 4 cut(s) 1197, 2352, 3332, 3787
Bme1390I CCNGG 7 cut(s) 1006, 1431, 1571, 1728, 1991, 2898, 3177
Bme18I GGWCC 3 cut(s) 341, 2411, 3520
BmeT110I CYCGRG 2 cut(s) 1929, 2682
BmgT120I GGNCC 7 cut(s) 22, 341, 466, 559, 2411, 3520, 4150
BmrFI CCNGG 7 cut(s) 1006, 1431, 1571, 1728, 1991, 2898, 3177
BmrI ACTGGG 1 cut(s) 1299
BmuI ACTGGG 1 cut(s) 1299
BplI GAGNNNNNCTC 4 cut(s) 290, 322, 3608, 3640
BpmI CTGGAG 1 cut(s) 1413
Bpu10I CCTNAGC 3 cut(s) 378, 1114, 4068
Bpu1102I GCTNAGC 4 cut(s) 1197, 2352, 3332, 3787
BpuEI CTTGAG 3 cut(s) 197, 3296, 3748
BpuMI CCSGG 2 cut(s) 1006, 1728
BsaAI YACGTR 2 cut(s) 2495, 3680
BsaBI GATNNNNATC 3 cut(s) 705, 1473, 2529
BsaHI GRCGYC 1 cut(s) 17
BsaWI WCCGGW 2 cut(s) 3155, 3807
BsaXI ACNNNNNCTCC 4 cut(s) 120, 150, 2877, 2907
Bse118I RCCGGY 2 cut(s) 783, 1767
Bse1I ACTGG 4 cut(s) 363, 1294, 1385, 3868
Bse21I CCTNAGG 2 cut(s) 2261, 2699
Bse3DI GCAATG 2 cut(s) 372, 2590
Bse8I GATNNNNATC 3 cut(s) 705, 1473, 2529
BseBI CCWGG 5 cut(s) 1431, 1571, 1991, 2898, 3177
BseJI GATNNNNATC 3 cut(s) 705, 1473, 2529
BseMI GCAATG 2 cut(s) 372, 2590
BseNI ACTGG 4 cut(s) 363, 1294, 1385, 3868
BseRI GAGGAG 3 cut(s) 2700, 3574, 3618
BseSI GKGCMC 1 cut(s) 3897
BseYI CCCAGC 1 cut(s) 1556
BsgI GTGCAG 3 cut(s) 604, 924, 2475
BshFI GGCC 8 cut(s) 23, 468, 560, 787, 1223, 3175, 4066, 4152
BshNI GGYRCC 1 cut(s) 780
BsiHKAI GWGCWC 4 cut(s) 935, 1216, 3897, 4056
BsiHKCI CYCGRG 2 cut(s) 1929, 2682
BsiSI CCGG 7 cut(s) 784, 947, 1005, 1728, 1768, 3156, 3808
BsmAI GTCTC 7 cut(s) 9, 123, 1819, 2902, 3004, 3556, 3939
BsmBI CGTCTC 1 cut(s) 3939
BsmI GAATGC 1 cut(s) 3232
BsnI GGCC 8 cut(s) 23, 468, 560, 787, 1223, 3175, 4066, 4152
BsoBI CYCGRG 2 cut(s) 1929, 2682
Bsp1286I GDGCHC 8 cut(s) 935, 1216, 2716, 2850, 3369, 3706, 3897, 4056
Bsp1407I TGTACA 1 cut(s) 369
Bsp1720I GCTNAGC 4 cut(s) 1197, 2352, 3332, 3787
BspACI CCGC 4 cut(s) 14, 2545, 2634, 3442
BspANI GGCC 8 cut(s) 23, 468, 560, 787, 1223, 3175, 4066, 4152
BspHI TCATGA 2 cut(s) 3514, 3793
BspMAI CTGCAG 1 cut(s) 833
BspMI ACCTGC 1 cut(s) 2497
BspPI GGATC 8 cut(s) 186, 246, 259, 1031, 1044, 1786, 3410, 3499
BspQI GCTCTTC 1 cut(s) 957
BspT107I GGYRCC 1 cut(s) 780
BsrDI GCAATG 2 cut(s) 372, 2590
BsrFI RCCGGY 2 cut(s) 783, 1767
BsrGI TGTACA 1 cut(s) 369
BsrI ACTGG 4 cut(s) 363, 1294, 1385, 3868
BssAI RCCGGY 2 cut(s) 783, 1767
BssNAI GTATAC 1 cut(s) 2921
BssNI GRCGYC 1 cut(s) 17
BssSI CACGAG 1 cut(s) 3285
BssT1I CCWWGG 4 cut(s) 815, 1443, 1531, 2216
Bst1107I GTATAC 1 cut(s) 2921
Bst2BI CACGAG 1 cut(s) 3285
Bst2UI CCWGG 5 cut(s) 1431, 1571, 1991, 2898, 3177
Bst6I CTCTTC 3 cut(s) 957, 2730, 2829
BstACI GRCGYC 1 cut(s) 17
BstAPI GCANNNNNTGC 4 cut(s) 973, 1891, 2990, 3236
BstAUI TGTACA 1 cut(s) 369
BstBAI YACGTR 2 cut(s) 2495, 3680
BstC8I GCNNGC 8 cut(s) 12, 678, 833, 1194, 1822, 2098, 2712, 3444
BstDSI CCRYGG 3 cut(s) 2101, 2360, 4061
BstEII GGTNACC 1 cut(s) 1646
BstENI CCTNNNNNAGG 2 cut(s) 3254, 3737
BstH2I RGCGCY 1 cut(s) 2359
BstHHI GCGC 1 cut(s) 2358
BstMAI GTCTC 7 cut(s) 9, 123, 1819, 2902, 3004, 3556, 3939
BstNI CCWGG 5 cut(s) 1431, 1571, 1991, 2898, 3177
BstNSI RCATGY 5 cut(s) 64, 645, 2185, 2939, 3316
BstPI GGTNACC 1 cut(s) 1646
BstSCI CCNGG 7 cut(s) 1004, 1429, 1569, 1726, 1989, 2896, 3175
BstSFI CTRYAG 2 cut(s) 829, 1748
BstSLI GKGCMC 1 cut(s) 3897
BstX2I RGATCY 8 cut(s) 178, 251, 1036, 2539, 2689, 2747, 3265, 3491
BstXI CCANNNNNNTGG 1 cut(s) 2897
BstYI RGATCY 8 cut(s) 178, 251, 1036, 2539, 2689, 2747, 3265, 3491
BstZ17I GTATAC 1 cut(s) 2921
Bsu36I CCTNAGG 2 cut(s) 2261, 2699
BsuI GTATCC 1 cut(s) 813
BsuRI GGCC 8 cut(s) 23, 468, 560, 787, 1223, 3175, 4066, 4152
BtgI CCRYGG 3 cut(s) 2101, 2360, 4061
BtsI GCAGTG 2 cut(s) 3187, 3974
BveI ACCTGC 1 cut(s) 2497
Cac8I GCNNGC 8 cut(s) 12, 678, 833, 1194, 1822, 2098, 2712, 3444
CaiI CAGNNNCTG 2 cut(s) 973, 2489
CciI TCATGA 2 cut(s) 3514, 3793
CfoI GCGC 1 cut(s) 2358
Cfr10I RCCGGY 2 cut(s) 783, 1767
Cfr13I GGNCC 7 cut(s) 22, 341, 466, 559, 2411, 3520, 4150
CseI GACGC 2 cut(s) 6, 1841
Csp6I GTAC 4 cut(s) 370, 647, 2885, 3724
CviQI GTAC 4 cut(s) 370, 647, 2885, 3724
DraI TTTAAA 3 cut(s) 222, 766, 3381
EaeI YGGCCR 1 cut(s) 1221
Eam1104I CTCTTC 3 cut(s) 957, 2730, 2829
EarI CTCTTC 3 cut(s) 957, 2730, 2829
Ecl136II GAGCTC 1 cut(s) 933
Eco130I CCWWGG 4 cut(s) 815, 1443, 1531, 2216
Eco24I GRGCYC 5 cut(s) 935, 2716, 2850, 3369, 3706
Eco32I GATATC 1 cut(s) 433
Eco47I GGWCC 3 cut(s) 341, 2411, 3520
Eco53kI GAGCTC 1 cut(s) 933
Eco57I CTGAAG 6 cut(s) 582, 1029, 1515, 2186, 2586, 3422
Eco72I CACGTG 1 cut(s) 2495
Eco81I CCTNAGG 2 cut(s) 2261, 2699
Eco88I CYCGRG 2 cut(s) 1929, 2682
Eco91I GGTNACC 1 cut(s) 1646
EcoICRI GAGCTC 1 cut(s) 933
EcoNI CCTNNNNNAGG 2 cut(s) 3254, 3737
EcoO109I RGGNCCY 2 cut(s) 466, 3520
EcoO65I GGTNACC 1 cut(s) 1646
EcoRI GAATTC 2 cut(s) 1309, 3045
EcoRII CCWGG 5 cut(s) 1429, 1569, 1989, 2896, 3175
EcoRV GATATC 1 cut(s) 433
EcoT14I CCWWGG 4 cut(s) 815, 1443, 1531, 2216
EcoT22I ATGCAT 1 cut(s) 2941
EcoT38I GRGCYC 5 cut(s) 935, 2716, 2850, 3369, 3706
ErhI CCWWGG 4 cut(s) 815, 1443, 1531, 2216
Esp3I CGTCTC 1 cut(s) 3939
FalI AAGNNNNNCTT 8 cut(s) 453, 485, 954, 986, 3012, 3044, 3480, 3512
FauI CCCGC 1 cut(s) 3435
FauNDI CATATG 1 cut(s) 91
FbaI TGATCA 2 cut(s) 2422, 2431
FblI GTMKAC 1 cut(s) 2920
FriOI GRGCYC 5 cut(s) 935, 2716, 2850, 3369, 3706
GlaI GCGC 1 cut(s) 2357
GsaI CCCAGC 1 cut(s) 1560
GsuI CTGGAG 1 cut(s) 1413
HaeII RGCGCY 1 cut(s) 2359
HaeIII GGCC 8 cut(s) 23, 468, 560, 787, 1223, 3175, 4066, 4152
HapII CCGG 7 cut(s) 784, 947, 1005, 1728, 1768, 3156, 3808
HgaI GACGC 2 cut(s) 6, 1841
HhaI GCGC 1 cut(s) 2358
Hin1I GRCGYC 1 cut(s) 17
Hin6I GCGC 1 cut(s) 2356
HinP1I GCGC 1 cut(s) 2356
HincII GTYRAC 1 cut(s) 3400
HindII GTYRAC 1 cut(s) 3400
HindIII AAGCTT 3 cut(s) 1497, 2198, 4103
HpaII CCGG 7 cut(s) 784, 947, 1005, 1728, 1768, 3156, 3808
HphI GGTGA 5 cut(s) 580, 2029, 2975, 3868, 4174
Hpy166II GTNNAC 9 cut(s) 103, 370, 647, 1549, 2921, 3200, 3400, 3724, 3895
Hpy8I GTNNAC 9 cut(s) 103, 370, 647, 1549, 2921, 3200, 3400, 3724, 3895
Hpy99I CGWCG 1 cut(s) 22
HpyAV CCTTC 8 cut(s) 383, 1391, 2656, 2679, 2862, 3482, 3743, 3805
HpyCH4IV ACGT 7 cut(s) 186, 2302, 2494, 3007, 3234, 3679, 4141
HpySE526I ACGT 7 cut(s) 186, 2302, 2494, 3007, 3234, 3679, 4141
Hsp92I GRCGYC 1 cut(s) 17
HspAI GCGC 1 cut(s) 2356
Ksp22I TGATCA 2 cut(s) 2422, 2431
LguI GCTCTTC 1 cut(s) 957
LmnI GCTCC 9 cut(s) 86, 930, 1111, 1340, 1899, 2809, 3098, 3364, 3904
MaeII ACGT 7 cut(s) 186, 2302, 2494, 3007, 3234, 3679, 4141
MaeIII GTNAC 8 cut(s) 857, 1285, 1421, 1565, 1646, 1653, 1876, 3757
MfeI CAATTG 3 cut(s) 1593, 3774, 4073
MflI RGATCY 8 cut(s) 178, 251, 1036, 2539, 2689, 2747, 3265, 3491
MhlI GDGCHC 8 cut(s) 935, 1216, 2716, 2850, 3369, 3706, 3897, 4056
MlyI GAGTC 2 cut(s) 37, 3626
MmeI TCCRAC 6 cut(s) 138, 520, 1756, 2817, 2883, 3696
Mph1103I ATGCAT 1 cut(s) 2941
MroXI GAANNNNTTC 4 cut(s) 1162, 2160, 2225, 3863
MslI CAYNNNNRTG 4 cut(s) 1479, 3313, 3798, 4002
MspA1I CMGCKG 4 cut(s) 1196, 1660, 3442, 3578
MspI CCGG 7 cut(s) 784, 947, 1005, 1728, 1768, 3156, 3808
MspR9I CCNGG 7 cut(s) 1006, 1431, 1571, 1728, 1991, 2898, 3177
MunI CAATTG 3 cut(s) 1593, 3774, 4073
Mva1269I GAATGC 1 cut(s) 3232
MvaI CCWGG 5 cut(s) 1431, 1571, 1991, 2898, 3177
NciI CCSGG 2 cut(s) 1006, 1728
NdeI CATATG 1 cut(s) 91
NmuCI GTSAC 5 cut(s) 857, 1421, 1565, 1876, 3757
NsiI ATGCAT 1 cut(s) 2941
NspI RCATGY 5 cut(s) 64, 645, 2185, 2939, 3316
PaeR7I CTCGAG 2 cut(s) 1929, 2682
PagI TCATGA 2 cut(s) 3514, 3793
PasI CCCWGGG 1 cut(s) 2897
PciI ACATGT 2 cut(s) 641, 3312
PciSI GCTCTTC 1 cut(s) 957
PctI GAATGC 1 cut(s) 3232
PdmI GAANNNNTTC 4 cut(s) 1162, 2160, 2225, 3863
PfeI GAWTC 9 cut(s) 353, 1796, 2378, 3025, 3032, 3433, 3466, 3770, 4111
PflMI CCANNNNNTGG 2 cut(s) 2366, 4159
PfoI TCCNGGA 2 cut(s) 1429, 1989
PleI GAGTC 2 cut(s) 37, 3625
PmaCI CACGTG 1 cut(s) 2495
PmlI CACGTG 1 cut(s) 2495
PpsI GAGTC 2 cut(s) 37, 3625
Ppu21I YACGTR 2 cut(s) 2495, 3680
PpuMI RGGWCCY 1 cut(s) 3520
PscI ACATGT 2 cut(s) 641, 3312
PshBI ATTAAT 1 cut(s) 3942
PsiI TTATAA 1 cut(s) 191
Psp124BI GAGCTC 1 cut(s) 935
Psp1406I AACGTT 2 cut(s) 186, 4141
Psp5II RGGWCCY 1 cut(s) 3520
Psp6I CCWGG 5 cut(s) 1429, 1569, 1989, 2896, 3175
PspCI CACGTG 1 cut(s) 2495
PspEI GGTNACC 1 cut(s) 1646
PspFI CCCAGC 1 cut(s) 1556
PspGI CCWGG 5 cut(s) 1429, 1569, 1989, 2896, 3175
PspPI GGNCC 7 cut(s) 22, 341, 466, 559, 2411, 3520, 4150
PspPPI RGGWCCY 1 cut(s) 3520
PspXI VCTCGAGB 1 cut(s) 1929
PstI CTGCAG 1 cut(s) 833
PstNI CAGNNNCTG 2 cut(s) 973, 2489
PsuI RGATCY 8 cut(s) 178, 251, 1036, 2539, 2689, 2747, 3265, 3491
PvuII CAGCTG 3 cut(s) 1196, 1660, 3578
RsaI GTAC 4 cut(s) 371, 648, 2886, 3725
RsaNI GTAC 4 cut(s) 370, 647, 2885, 3724
RseI CAYNNNNRTG 4 cut(s) 1479, 3313, 3798, 4002
SacI GAGCTC 1 cut(s) 935
SapI GCTCTTC 1 cut(s) 957
Sau96I GGNCC 7 cut(s) 22, 341, 466, 559, 2411, 3520, 4150
SchI GAGTC 2 cut(s) 37, 3626
ScrFI CCNGG 7 cut(s) 1006, 1431, 1571, 1728, 1991, 2898, 3177
SduI GDGCHC 8 cut(s) 935, 1216, 2716, 2850, 3369, 3706, 3897, 4056
SfcI CTRYAG 2 cut(s) 829, 1748
Sfr274I CTCGAG 2 cut(s) 1929, 2682
SinI GGWCC 3 cut(s) 341, 2411, 3520
SlaI CTCGAG 2 cut(s) 1929, 2682
SmiI ATTTAAAT 1 cut(s) 222
SmiMI CAYNNNNRTG 4 cut(s) 1479, 3313, 3798, 4002
SmlI CTYRAG 5 cut(s) 212, 1929, 2682, 3275, 3727
SmoI CTYRAG 5 cut(s) 212, 1929, 2682, 3275, 3727
SsiI CCGC 4 cut(s) 14, 2545, 2634, 3442
SspI AATATT 2 cut(s) 166, 2653
SstI GAGCTC 1 cut(s) 935
StyD4I CCNGG 7 cut(s) 1004, 1429, 1569, 1726, 1989, 2896, 3175
StyI CCWWGG 4 cut(s) 815, 1443, 1531, 2216
SwaI ATTTAAAT 1 cut(s) 222
TaiI ACGT 7 cut(s) 189, 2305, 2497, 3010, 3237, 3682, 4144
TaqI TCGA 9 cut(s) 48, 97, 1210, 1930, 2683, 2818, 2877, 3218, 3937
TaqII GACCGA 1 cut(s) 524
TatI WGTACW 2 cut(s) 369, 3723
TauI GCSGC 1 cut(s) 17
TfiI GAWTC 9 cut(s) 353, 1796, 2378, 3025, 3032, 3433, 3466, 3770, 4111
TseFI GTSAC 5 cut(s) 857, 1421, 1565, 1876, 3757
Tsp45I GTSAC 5 cut(s) 857, 1421, 1565, 1876, 3757
Van91I CCANNNNNTGG 2 cut(s) 2366, 4159
VneI GTGCAC 1 cut(s) 3893
VpaK11BI GGWCC 3 cut(s) 341, 2411, 3520
VspI ATTAAT 1 cut(s) 3942
XagI CCTNNNNNAGG 2 cut(s) 3254, 3737
XapI RAATTY 9 cut(s) 217, 1055, 1309, 1415, 2022, 2147, 2987, 3045, 3860
XbaI TCTAGA 3 cut(s) 2338, 2557, 3736
XceI RCATGY 5 cut(s) 64, 645, 2185, 2939, 3316
XhoI CTCGAG 2 cut(s) 1929, 2682
XmaJI CCTAGG 1 cut(s) 2216
XmiI GTMKAC 1 cut(s) 2920
XmnI GAANNNNTTC 4 cut(s) 1162, 2160, 2225, 3863
Zsp2I ATGCAT 1 cut(s) 2941
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.