BEST Arabidopsis thaliana protein match is COP1-interacting protein-related (TAIR AT1G72410.1)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G14172 AT3G14172 AT3G14172 |
| fragaria_vesca | FvH4_6g35280 FvH4_6g35280 FvH4_6g35280 |
| malus_domestica | MD09G1177000.v1.1 MD17G1149300.v1.1 |
| prunus_persica | Prupe.3G036100_v2.0.a1 Prupe.3G036100_v2.0.a1 Prupe.3G036100_v2.0.a1 |
| pyrus_communis | pycom09g09520 pycom17g14310 |
| rosa_chinensis | RchiOBHm_Chr2g0146661 |
| rosa_laevigata | RLG00000020212 |
| rosa_multiflora | Rmu_co8402929.1_g000001 Rmu_sc0001986.1_g000037 Rmu_sc0015720.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00099980 |
| rosa_rugosa | Rorug02G0395900 |
| rosa_samantha | Rh2AG452200 Rh2BG465100 Rh2CG439200 Rh2DG474100 |
| rosa_wichuraiana | Rw2G036940 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 584 |
| AatII | GACGTC | 1 cut(s) | 3554 |
| Acc16I | TGCGCA | 1 cut(s) | 2976 |
| Acc36I | ACCTGC | 1 cut(s) | 3196 |
| AccI | GTMKAC | 4 cut(s) | 1350, 1583, 2402, 2448 |
| AccII | CGCG | 1 cut(s) | 3423 |
| AccIII | TCCGGA | 1 cut(s) | 1405 |
| AcuI | CTGAAG | 8 cut(s) | 1134, 2315, 2862, 2973, 3132, 3297, 3576, 3749 |
| AcyI | GRCGYC | 1 cut(s) | 3551 |
| AdeI | CACNNNGTG | 1 cut(s) | 3242 |
| AfaI | GTAC | 8 cut(s) | 249, 262, 859, 864, 1053, 1264, 2901, 3127 |
| AfeI | AGCGCT | 2 cut(s) | 289, 3042 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 240, 1730, 1778, 1901, 2729, 2758 |
| AflII | CTTAAG | 1 cut(s) | 809 |
| AflIII | ACRYGT | 1 cut(s) | 3691 |
| AhlI | ACTAGT | 2 cut(s) | 347, 3251 |
| AjiI | CACGTC | 3 cut(s) | 2414, 2432, 3694 |
| AjnI | CCWGG | 7 cut(s) | 215, 711, 1984, 2112, 2528, 2757, 3228 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1424, 1456 |
| AleI | CACNNNNGTG | 1 cut(s) | 2759 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 1959, 1991, 3341, 3373 |
| Alw21I | GWGCWC | 3 cut(s) | 620, 1136, 2537 |
| Alw44I | GTGCAC | 1 cut(s) | 1132 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 398, 789 |
| Ama87I | CYCGRG | 3 cut(s) | 162, 2728, 3267 |
| Aor13HI | TCCGGA | 1 cut(s) | 1405 |
| Aor51HI | AGCGCT | 2 cut(s) | 289, 3042 |
| AoxI | GGCC | 6 cut(s) | 549, 602, 1754, 1892, 2063, 2813 |
| ApaLI | GTGCAC | 1 cut(s) | 1132 |
| AseI | ATTAAT | 1 cut(s) | 1818 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2822 |
| AspA2I | CCTAGG | 1 cut(s) | 890 |
| AspLEI | GCGC | 6 cut(s) | 290, 773, 2074, 2977, 3043, 3425 |
| AspS9I | GGNCC | 3 cut(s) | 231, 549, 2319 |
| AsuC2I | CCSGG | 4 cut(s) | 163, 164, 2022, 3240 |
| AsuNHI | GCTAGC | 1 cut(s) | 442 |
| AvaI | CYCGRG | 3 cut(s) | 162, 2728, 3267 |
| AvaII | GGWCC | 2 cut(s) | 231, 2319 |
| AvrII | CCTAGG | 1 cut(s) | 890 |
| BaeGI | GKGCMC | 2 cut(s) | 1136, 2428 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 641, 674, 2891, 2924 |
| BamHI | GGATCC | 1 cut(s) | 1561 |
| BanII | GRGCYC | 1 cut(s) | 620 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 469, 501, 2432, 2464 |
| BauI | CACGAG | 2 cut(s) | 901, 2206 |
| BbsI | GAAGAC | 7 cut(s) | 25, 702, 1774, 2114, 2151, 2307, 3615 |
| Bbv12I | GWGCWC | 3 cut(s) | 620, 1136, 2537 |
| BceAI | ACGGC | 3 cut(s) | 455, 923, 1879 |
| BciT130I | CCWGG | 7 cut(s) | 217, 713, 1986, 2114, 2530, 2759, 3230 |
| BclI | TGATCA | 2 cut(s) | 352, 2101 |
| BcnI | CCSGG | 4 cut(s) | 163, 164, 2022, 3240 |
| BcuI | ACTAGT | 2 cut(s) | 347, 3251 |
| BfmI | CTRYAG | 5 cut(s) | 1029, 1809, 2067, 2403, 2859 |
| BfoI | RGCGCY | 2 cut(s) | 291, 3044 |
| BfrI | CTTAAG | 1 cut(s) | 809 |
| BfuAI | ACCTGC | 1 cut(s) | 3196 |
| BglII | AGATCT | 1 cut(s) | 3586 |
| BlnI | CCTAGG | 1 cut(s) | 890 |
| BlpI | GCTNAGC | 1 cut(s) | 911 |
| BmcAI | AGTACT | 1 cut(s) | 3127 |
| Bme18I | GGWCC | 2 cut(s) | 231, 2319 |
| BmeT110I | CYCGRG | 3 cut(s) | 162, 2728, 3267 |
| BmgBI | CACGTC | 3 cut(s) | 2414, 2432, 3694 |
| BmgT120I | GGNCC | 3 cut(s) | 231, 549, 2319 |
| BmiI | GGNNCC | 7 cut(s) | 214, 232, 233, 550, 781, 1563, 2527 |
| BmrI | ACTGGG | 3 cut(s) | 684, 1294, 3138 |
| BmtI | GCTAGC | 1 cut(s) | 446 |
| BmuI | ACTGGG | 3 cut(s) | 684, 1294, 3138 |
| BpiI | GAAGAC | 7 cut(s) | 25, 702, 1774, 2114, 2151, 2307, 3615 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1834, 1866 |
| BpmI | CTGGAG | 5 cut(s) | 375, 984, 1752, 2326, 3309 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 911 |
| BpuEI | CTTGAG | 2 cut(s) | 1721, 3634 |
| BpuMI | CCSGG | 4 cut(s) | 163, 164, 2022, 3240 |
| Bsa29I | ATCGAT | 5 cut(s) | 541, 1086, 1411, 3280, 3598 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2484 |
| BsaHI | GRCGYC | 1 cut(s) | 3551 |
| BsaI | GGTCTC | 1 cut(s) | 702 |
| BsaWI | WCCGGW | 1 cut(s) | 1405 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1959, 1989, 3741, 3771 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 240, 1730, 1778, 1901, 2729, 2758 |
| Bse3DI | GCAATG | 2 cut(s) | 1642, 2124 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2484 |
| BseAI | TCCGGA | 1 cut(s) | 1405 |
| BseBI | CCWGG | 7 cut(s) | 217, 713, 1986, 2114, 2530, 2759, 3230 |
| BseCI | ATCGAT | 5 cut(s) | 541, 1086, 1411, 3280, 3598 |
| BseGI | GGATG | 9 cut(s) | 301, 1114, 1175, 1300, 2485, 2527, 2893, 3036, 3568 |
| BseJI | GATNNNNATC | 1 cut(s) | 2484 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 240, 1730, 1778, 1901, 2729, 2758 |
| BseMI | GCAATG | 2 cut(s) | 1642, 2124 |
| BseSI | GKGCMC | 2 cut(s) | 1136, 2428 |
| BsgI | GTGCAG | 2 cut(s) | 938, 2454 |
| Bsh1236I | CGCG | 1 cut(s) | 3423 |
| BshFI | GGCC | 6 cut(s) | 551, 604, 1756, 1894, 2065, 2815 |
| BshVI | ATCGAT | 5 cut(s) | 541, 1086, 1411, 3280, 3598 |
| BsiHKAI | GWGCWC | 3 cut(s) | 620, 1136, 2537 |
| BsiHKCI | CYCGRG | 3 cut(s) | 162, 2728, 3267 |
| BsiSI | CCGG | 4 cut(s) | 163, 1406, 2022, 3240 |
| BslFI | GGGAC | 3 cut(s) | 244, 358, 2669 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 240, 1730, 1778, 1901, 2729, 2758 |
| BsmBI | CGTCTC | 3 cut(s) | 898, 2277, 2404 |
| BsmFI | GGGAC | 3 cut(s) | 244, 358, 2669 |
| BsmI | GAATGC | 1 cut(s) | 1489 |
| BsnI | GGCC | 6 cut(s) | 551, 604, 1756, 1894, 2065, 2815 |
| Bso31I | GGTCTC | 1 cut(s) | 702 |
| BsoBI | CYCGRG | 3 cut(s) | 162, 2728, 3267 |
| Bsp1286I | GDGCHC | 4 cut(s) | 620, 1136, 2428, 2537 |
| Bsp13I | TCCGGA | 1 cut(s) | 1405 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 911 |
| Bsp19I | CCATGG | 2 cut(s) | 3216, 3257 |
| BspANI | GGCC | 6 cut(s) | 551, 604, 1756, 1894, 2065, 2815 |
| BspDI | ATCGAT | 5 cut(s) | 541, 1086, 1411, 3280, 3598 |
| BspEI | TCCGGA | 1 cut(s) | 1405 |
| BspFNI | CGCG | 1 cut(s) | 3423 |
| BspHI | TCATGA | 1 cut(s) | 826 |
| BspLI | GGNNCC | 7 cut(s) | 214, 232, 233, 550, 781, 1563, 2527 |
| BspMAI | CTGCAG | 2 cut(s) | 1033, 1813 |
| BspMI | ACCTGC | 1 cut(s) | 3196 |
| BspOI | GCTAGC | 1 cut(s) | 446 |
| BspQI | GCTCTTC | 1 cut(s) | 756 |
| BspTI | CTTAAG | 1 cut(s) | 809 |
| BspTNI | GGTCTC | 1 cut(s) | 702 |
| BsrDI | GCAATG | 2 cut(s) | 1642, 2124 |
| BssNAI | GTATAC | 1 cut(s) | 2449 |
| BssNI | GRCGYC | 1 cut(s) | 3551 |
| BssSI | CACGAG | 2 cut(s) | 901, 2206 |
| BssT1I | CCWWGG | 4 cut(s) | 890, 3216, 3257, 3767 |
| Bst1107I | GTATAC | 1 cut(s) | 2449 |
| Bst2BI | CACGAG | 2 cut(s) | 901, 2206 |
| Bst2UI | CCWGG | 7 cut(s) | 217, 713, 1986, 2114, 2530, 2759, 3230 |
| Bst4CI | ACNGT | 9 cut(s) | 514, 791, 862, 1131, 1554, 1725, 2055, 2679, 3512 |
| Bst6I | CTCTTC | 5 cut(s) | 633, 756, 840, 3361, 3577 |
| BstACI | GRCGYC | 1 cut(s) | 3551 |
| BstAFI | CTTAAG | 1 cut(s) | 809 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2272 |
| BstC8I | GCNNGC | 5 cut(s) | 444, 571, 917, 1033, 3677 |
| BstDSI | CCRYGG | 2 cut(s) | 3216, 3257 |
| BstF5I | GGATG | 9 cut(s) | 301, 1114, 1175, 1300, 2485, 2527, 2893, 3036, 3568 |
| BstFNI | CGCG | 1 cut(s) | 3423 |
| BstH2I | RGCGCY | 2 cut(s) | 291, 3044 |
| BstHHI | GCGC | 6 cut(s) | 290, 773, 2074, 2977, 3043, 3425 |
| BstNI | CCWGG | 7 cut(s) | 217, 713, 1986, 2114, 2530, 2759, 3230 |
| BstNSI | RCATGY | 2 cut(s) | 573, 937 |
| BstSFI | CTRYAG | 5 cut(s) | 1029, 1809, 2067, 2403, 2859 |
| BstSLI | GKGCMC | 2 cut(s) | 1136, 2428 |
| BstUI | CGCG | 1 cut(s) | 3423 |
| BstV2I | GAAGAC | 7 cut(s) | 25, 702, 1774, 2114, 2151, 2307, 3615 |
| BstX2I | RGATCY | 3 cut(s) | 1561, 2077, 3586 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 3653, 3704 |
| BstYI | RGATCY | 3 cut(s) | 1561, 2077, 3586 |
| BstZ17I | GTATAC | 1 cut(s) | 2449 |
| Bsu15I | ATCGAT | 5 cut(s) | 541, 1086, 1411, 3280, 3598 |
| BsuRI | GGCC | 6 cut(s) | 551, 604, 1756, 1894, 2065, 2815 |
| BsuTUI | ATCGAT | 5 cut(s) | 541, 1086, 1411, 3280, 3598 |
| BtgI | CCRYGG | 2 cut(s) | 3216, 3257 |
| BtrI | CACGTC | 3 cut(s) | 2414, 2432, 3694 |
| BtsCI | GGATG | 9 cut(s) | 301, 1114, 1175, 1300, 2485, 2527, 2893, 3036, 3568 |
| BtsI | GCAGTG | 1 cut(s) | 2589 |
| BveI | ACCTGC | 1 cut(s) | 3196 |
| Cac8I | GCNNGC | 5 cut(s) | 444, 571, 917, 1033, 3677 |
| CaiI | CAGNNNCTG | 2 cut(s) | 398, 789 |
| CciI | TCATGA | 1 cut(s) | 826 |
| CfoI | GCGC | 6 cut(s) | 290, 773, 2074, 2977, 3043, 3425 |
| Cfr13I | GGNCC | 3 cut(s) | 231, 549, 2319 |
| Cfr9I | CCCGGG | 1 cut(s) | 162 |
| ClaI | ATCGAT | 5 cut(s) | 541, 1086, 1411, 3280, 3598 |
| CseI | GACGC | 3 cut(s) | 2294, 2592, 3173 |
| CsiI | ACCWGGT | 1 cut(s) | 215 |
| Csp6I | GTAC | 8 cut(s) | 248, 261, 858, 863, 1052, 1263, 2900, 3126 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1258, 1293 |
| CviQI | GTAC | 8 cut(s) | 248, 261, 858, 863, 1052, 1263, 2900, 3126 |
| DraI | TTTAAA | 1 cut(s) | 3724 |
| DraIII | CACNNNGTG | 1 cut(s) | 3242 |
| Eam1104I | CTCTTC | 5 cut(s) | 633, 756, 840, 3361, 3577 |
| EarI | CTCTTC | 5 cut(s) | 633, 756, 840, 3361, 3577 |
| EciI | GGCGGA | 3 cut(s) | 2151, 2662, 2765 |
| Ecl136II | GAGCTC | 1 cut(s) | 618 |
| Eco130I | CCWWGG | 4 cut(s) | 890, 3216, 3257, 3767 |
| Eco147I | AGGCCT | 1 cut(s) | 2065 |
| Eco24I | GRGCYC | 1 cut(s) | 620 |
| Eco31I | GGTCTC | 1 cut(s) | 702 |
| Eco32I | GATATC | 3 cut(s) | 1834, 3284, 3540 |
| Eco47I | GGWCC | 2 cut(s) | 231, 2319 |
| Eco47III | AGCGCT | 2 cut(s) | 289, 3042 |
| Eco53kI | GAGCTC | 1 cut(s) | 618 |
| Eco57I | CTGAAG | 8 cut(s) | 1134, 2315, 2862, 2973, 3132, 3297, 3576, 3749 |
| Eco88I | CYCGRG | 3 cut(s) | 162, 2728, 3267 |
| EcoICRI | GAGCTC | 1 cut(s) | 618 |
| EcoO109I | RGGNCCY | 1 cut(s) | 231 |
| EcoRI | GAATTC | 2 cut(s) | 1426, 3262 |
| EcoRII | CCWGG | 7 cut(s) | 215, 711, 1984, 2112, 2528, 2757, 3228 |
| EcoRV | GATATC | 3 cut(s) | 1834, 3284, 3540 |
| EcoT14I | CCWWGG | 4 cut(s) | 890, 3216, 3257, 3767 |
| EcoT38I | GRGCYC | 1 cut(s) | 620 |
| ErhI | CCWWGG | 4 cut(s) | 890, 3216, 3257, 3767 |
| Esp3I | CGTCTC | 3 cut(s) | 898, 2277, 2404 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 994, 1026, 1309, 1341, 2343, 2375 |
| FaqI | GGGAC | 3 cut(s) | 244, 358, 2669 |
| FauI | CCCGC | 1 cut(s) | 2921 |
| FauNDI | CATATG | 1 cut(s) | 1971 |
| FbaI | TGATCA | 2 cut(s) | 352, 2101 |
| FblI | GTMKAC | 4 cut(s) | 1350, 1583, 2402, 2448 |
| FokI | GGATG | 9 cut(s) | 308, 1121, 1162, 1307, 2472, 2534, 2900, 3043, 3575 |
| FriOI | GRGCYC | 1 cut(s) | 620 |
| FspI | TGCGCA | 1 cut(s) | 2976 |
| GlaI | GCGC | 6 cut(s) | 289, 772, 2073, 2976, 3042, 3424 |
| GsuI | CTGGAG | 5 cut(s) | 375, 984, 1752, 2326, 3309 |
| HaeII | RGCGCY | 2 cut(s) | 291, 3044 |
| HaeIII | GGCC | 6 cut(s) | 551, 604, 1756, 1894, 2065, 2815 |
| HapII | CCGG | 4 cut(s) | 163, 1406, 2022, 3240 |
| HgaI | GACGC | 3 cut(s) | 2294, 2592, 3173 |
| HhaI | GCGC | 6 cut(s) | 290, 773, 2074, 2977, 3043, 3425 |
| Hin1I | GRCGYC | 1 cut(s) | 3551 |
| Hin6I | GCGC | 6 cut(s) | 288, 771, 2072, 2975, 3041, 3423 |
| HinP1I | GCGC | 6 cut(s) | 288, 771, 2072, 2975, 3041, 3423 |
| HincII | GTYRAC | 1 cut(s) | 794 |
| HindII | GTYRAC | 1 cut(s) | 794 |
| HindIII | AAGCTT | 3 cut(s) | 806, 2441, 3063 |
| HpaII | CCGG | 4 cut(s) | 163, 1406, 2022, 3240 |
| Hpy99I | CGWCG | 2 cut(s) | 2433, 3553 |
| HpyCH4III | ACNGT | 9 cut(s) | 514, 791, 862, 1131, 1554, 1725, 2055, 2679, 3512 |
| HpyCH4IV | ACGT | 6 cut(s) | 652, 2413, 2431, 2597, 3551, 3693 |
| HpySE526I | ACGT | 6 cut(s) | 652, 2413, 2431, 2597, 3551, 3693 |
| Hsp92I | GRCGYC | 1 cut(s) | 3551 |
| HspAI | GCGC | 6 cut(s) | 288, 771, 2072, 2975, 3041, 3423 |
| KflI | GGGWCCC | 1 cut(s) | 231 |
| Kpn2I | TCCGGA | 1 cut(s) | 1405 |
| Ksp22I | TGATCA | 2 cut(s) | 352, 2101 |
| LguI | GCTCTTC | 1 cut(s) | 756 |
| LmnI | GCTCC | 5 cut(s) | 1980, 2532, 2920, 3407, 3749 |
| MabI | ACCWGGT | 1 cut(s) | 215 |
| MaeII | ACGT | 6 cut(s) | 652, 2413, 2431, 2597, 3551, 3693 |
| MfeI | CAATTG | 2 cut(s) | 678, 2873 |
| MflI | RGATCY | 3 cut(s) | 1561, 2077, 3586 |
| MhlI | GDGCHC | 4 cut(s) | 620, 1136, 2428, 2537 |
| MlyI | GAGTC | 6 cut(s) | 892, 1313, 1661, 3116, 3227, 3314 |
| MmeI | TCCRAC | 6 cut(s) | 61, 294, 1293, 1892, 2160, 2716 |
| MroI | TCCGGA | 1 cut(s) | 1405 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2822 |
| MseI | TTAA | 6 cut(s) | 810, 1818, 2129, 2940, 3363, 3723 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1248, 2759 |
| MspA1I | CMGCKG | 2 cut(s) | 398, 977 |
| MspCI | CTTAAG | 1 cut(s) | 809 |
| MspI | CCGG | 4 cut(s) | 163, 1406, 2022, 3240 |
| MunI | CAATTG | 2 cut(s) | 678, 2873 |
| Mva1269I | GAATGC | 1 cut(s) | 1489 |
| MvaI | CCWGG | 7 cut(s) | 217, 713, 1986, 2114, 2530, 2759, 3230 |
| MvnI | CGCG | 1 cut(s) | 3423 |
| NciI | CCSGG | 4 cut(s) | 163, 164, 2022, 3240 |
| NcoI | CCATGG | 2 cut(s) | 3216, 3257 |
| NdeI | CATATG | 1 cut(s) | 1971 |
| NheI | GCTAGC | 1 cut(s) | 442 |
| NlaIV | GGNNCC | 7 cut(s) | 214, 232, 233, 550, 781, 1563, 2527 |
| NmeAIII | GCCGAG | 1 cut(s) | 2591 |
| NmuCI | GTSAC | 6 cut(s) | 403, 1073, 1280, 2044, 2604, 3466 |
| NsbI | TGCGCA | 1 cut(s) | 2976 |
| NspI | RCATGY | 2 cut(s) | 573, 937 |
| OliI | CACNNNNGTG | 1 cut(s) | 2759 |
| PaeI | GCATGC | 1 cut(s) | 573 |
| PagI | TCATGA | 1 cut(s) | 826 |
| PceI | AGGCCT | 1 cut(s) | 2065 |
| PciSI | GCTCTTC | 1 cut(s) | 756 |
| PctI | GAATGC | 1 cut(s) | 1489 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2822 |
| PfeI | GAWTC | 8 cut(s) | 665, 800, 1237, 1453, 2417, 2996, 3146, 3633 |
| PflFI | GACNNNGTC | 1 cut(s) | 3099 |
| PfoI | TCCNGGA | 2 cut(s) | 2528, 3228 |
| PleI | GAGTC | 6 cut(s) | 891, 1312, 1660, 3115, 3227, 3314 |
| PpsI | GAGTC | 6 cut(s) | 891, 1312, 1660, 3115, 3227, 3314 |
| PpuMI | RGGWCCY | 1 cut(s) | 231 |
| PshBI | ATTAAT | 1 cut(s) | 1818 |
| PsiI | TTATAA | 1 cut(s) | 584 |
| Psp124BI | GAGCTC | 1 cut(s) | 620 |
| Psp5II | RGGWCCY | 1 cut(s) | 231 |
| Psp6I | CCWGG | 7 cut(s) | 215, 711, 1984, 2112, 2528, 2757, 3228 |
| PspGI | CCWGG | 7 cut(s) | 215, 711, 1984, 2112, 2528, 2757, 3228 |
| PspN4I | GGNNCC | 7 cut(s) | 214, 232, 233, 550, 781, 1563, 2527 |
| PspPI | GGNCC | 3 cut(s) | 231, 549, 2319 |
| PspPPI | RGGWCCY | 1 cut(s) | 231 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 205, 237, 2578, 2610 |
| PstI | CTGCAG | 2 cut(s) | 1033, 1813 |
| PstNI | CAGNNNCTG | 2 cut(s) | 398, 789 |
| PsuI | RGATCY | 3 cut(s) | 1561, 2077, 3586 |
| PsyI | GACNNNGTC | 1 cut(s) | 3099 |
| PvuII | CAGCTG | 1 cut(s) | 977 |
| RsaI | GTAC | 8 cut(s) | 249, 262, 859, 864, 1053, 1264, 2901, 3127 |
| RsaNI | GTAC | 8 cut(s) | 248, 261, 858, 863, 1052, 1263, 2900, 3126 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1248, 2759 |
| SacI | GAGCTC | 1 cut(s) | 620 |
| SapI | GCTCTTC | 1 cut(s) | 756 |
| SaqAI | TTAA | 6 cut(s) | 810, 1818, 2129, 2940, 3363, 3723 |
| Sau96I | GGNCC | 3 cut(s) | 231, 549, 2319 |
| ScaI | AGTACT | 1 cut(s) | 3127 |
| SchI | GAGTC | 6 cut(s) | 892, 1313, 1661, 3116, 3227, 3314 |
| SduI | GDGCHC | 4 cut(s) | 620, 1136, 2428, 2537 |
| SexAI | ACCWGGT | 1 cut(s) | 215 |
| SfcI | CTRYAG | 5 cut(s) | 1029, 1809, 2067, 2403, 2859 |
| SinI | GGWCC | 2 cut(s) | 231, 2319 |
| SmaI | CCCGGG | 1 cut(s) | 164 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1248, 2759 |
| SmlI | CTYRAG | 3 cut(s) | 809, 1700, 3613 |
| SmoI | CTYRAG | 3 cut(s) | 809, 1700, 3613 |
| SpeI | ACTAGT | 2 cut(s) | 347, 3251 |
| SphI | GCATGC | 1 cut(s) | 573 |
| SseBI | AGGCCT | 1 cut(s) | 2065 |
| SstI | GAGCTC | 1 cut(s) | 620 |
| StuI | AGGCCT | 1 cut(s) | 2065 |
| StyI | CCWWGG | 4 cut(s) | 890, 3216, 3257, 3767 |
| TaaI | ACNGT | 9 cut(s) | 514, 791, 862, 1131, 1554, 1725, 2055, 2679, 3512 |
| TaiI | ACGT | 6 cut(s) | 655, 2416, 2434, 2600, 3554, 3696 |
| TaqI | TCGA | 8 cut(s) | 237, 541, 1086, 1411, 2584, 3280, 3598, 3623 |
| TaqII | GACCGA | 1 cut(s) | 2336 |
| TatI | WGTACW | 2 cut(s) | 1262, 3125 |
| TauI | GCSGC | 3 cut(s) | 398, 1759, 3518 |
| TfiI | GAWTC | 8 cut(s) | 665, 800, 1237, 1453, 2417, 2996, 3146, 3633 |
| Tru1I | TTAA | 6 cut(s) | 810, 1818, 2129, 2940, 3363, 3723 |
| Tru9I | TTAA | 6 cut(s) | 810, 1818, 2129, 2940, 3363, 3723 |
| TseFI | GTSAC | 6 cut(s) | 403, 1073, 1280, 2044, 2604, 3466 |
| Tsp45I | GTSAC | 6 cut(s) | 403, 1073, 1280, 2044, 2604, 3466 |
| TspGWI | ACGGA | 2 cut(s) | 1967, 1997 |
| TspMI | CCCGGG | 1 cut(s) | 162 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3099 |
| Vha464I | CTTAAG | 1 cut(s) | 809 |
| VneI | GTGCAC | 1 cut(s) | 1132 |
| VpaK11BI | GGWCC | 2 cut(s) | 231, 2319 |
| VspI | ATTAAT | 1 cut(s) | 1818 |
| XbaI | TCTAGA | 2 cut(s) | 704, 2246 |
| XceI | RCATGY | 2 cut(s) | 573, 937 |
| XmaI | CCCGGG | 1 cut(s) | 162 |
| XmaJI | CCTAGG | 1 cut(s) | 890 |
| XmiI | GTMKAC | 4 cut(s) | 1350, 1583, 2402, 2448 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2822 |
| ZraI | GACGTC | 1 cut(s) | 3552 |
| ZrmI | AGTACT | 1 cut(s) | 3127 |