Rh2AG452200

BEST Arabidopsis thaliana protein match is COP1-interacting protein-related (TAIR AT1G72410.1)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Reverse (-)
66653840 .. 66664304
10465 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG452200.1

Sequence Viewer

Length: 4131 bp
ATGAAATCTGATACGCCTCTTGATTATGCGGTTTTCCAGTTGTCACCCAAGCATTCAAGATGTGAATTGTATGTTTCTAGTAATGGAAACACTGAGAAGCTAGCGTCTGGTTCAATCAAGCCATTTGTAACCCATTTAAAGGTTGCAGAGGAGCAGGTTGCACTTGCAGTTCAGTCAATTAAACTTGAGGTTGACAAACGTAAACATGCTGAGAAATGGTTCACAAAAGGAACACTTGAAAGGTTTGTGCGGTTTGTTAGTACACCGGAGGTACTAGAACTGGTCAATACCTTTGATGCAGAAATGTCCCAATTGGAATCTGCACGGAGAATATATTCTCAGGGAATGGGAGGTCAACCTTCTGGTGCATTGGGTGGGGATGGAAAAGGTAGCACAGCAGCCGCAGATGCAACAAAGAAGGAGCTTTTAAGGGCTATTGATGTACGGCTGGTTGCAGTGAGGCAGGATCTATCCACAGCTTGTGCTCGTGCATCTGCTGCTGGTTTCAACCTTGATACAGTCTCCGAACTACAACTATTTGCAGATCAGTTTGGTGCCCATCGGTTACACGAAGCTAGTACAAAGTTTATATCTTTGTGGGAGAGAAGATCAGAGCTGATCAGCCCATGGAAGCCAGGTGGCGATGACAGACTCGTCCGAGCCTCATGCGAGTCTGACATGTCAATCGATGACCCTACCGAAGACACAACTGGGTTGCATCTAGAAGACCTATCAAAGCCATCCACGTGTCAACAGCCCAAGTCCGTTGCCAGCAACTTTCCCACGCAACAACGTAACAACGTAACTGAGGAAGACAAAGACGGCGACAAGACCAAGAAGGTGGAAAACAAGGACGAGCCTCAGACCGAGCCAACGTTGGCGACTCAACAACCTGCGAGAAGGCTCAGCGTCCAGGACCGCATCAAGCTCTTTGAGAATAAGCAGGACAGTCCTACTGGTTCCAGCGGTGGCGGCAAACCCGTTGTTGCCAAACCTGCAGAGCTCCGGCGGCTGTCGTCTGATGTATCATCGGCGCCTGCGGCCGTGCTTCGGAGATGGAGCGGTGCTAGTGACATGAGCATTGATTTGAGTGCTGACAAGAAAGACACTGAGAGCCCCTTGTGCACGCCATCCTCTATTTCCTCTGTTTCTCTATCAAGGGGAAATAGTATTGTATCTGGTGTGGCAGAGGGTAAGGACCGGAAGGCGCTGAATGACTCGGTGGATTCGAGCCTTTCTGGTAGAGTTGGCCATCTTGGGGTGAAAGATCAAGCCGAGGGGCAGATCGGGGCTGGGGTATTAGGTGAAGAGGAGGAGGTGGGGTCAAAGGTGAGGAACAATTTGAAGACGCAGGTGAGTTCCCAGACCCAATCCAAGTCTTCTATTGGCAAAACAGAGCAGGTTGCGTTAAGTGATCAAGGGGTTTCTCTAGAGAAGTTGAATATATCTTCTGGTAGCAAAGAGAGAAGTGGTGGGTCTAAGGATCAACCCGGTTCCGAGACACGGTCTATAGGATTTTCAAATCGGGCAGCGGTTGCTGGTGGGAAGAACCAGGTTGGGAGTGCTCCATCTGATGGTGGAACTGTGAATAGGGTTGAGGATTCTAGATCGAGAGATCAGTCAATGACTCAGTTACATCCTAGGGGATTCCAGGGTCATACCCGATCTTTCTCGGGGCAGTCTGAGGGTGGTTTTGGACGAAAACCTGATGAAGCCTCTTCAGGGCAGCTCAAAGGCATCCAGCCTGATCAACTACCTCCCCAGCCTCTGTGGAGATCGTTTTCTGGAGAGCTTGAGGAGGAGGTGGGAAGAAATGACTTGACATCATCAGATAAGCAACAACTAAAAGTGGAAAGTTCTGGAACTCAGAAAATGAAATTCCAGAAACCTGCTTCTGCCAGTCGTGAACAGAATAAGAGGTCACAGGGTAGGAGAGATGAAAGCGGAAACAGCAAGTTGGATTTTATGGGTGATAAGGGTTCAGTGAATCAAGAGAGCCTTGCTACAATGTCAACAGCAGTAGAGCAAGTTCAGAGAGTAAGACAGACCAAGGGAAATCAGGAACTCAATGATGAACTTAAACTCAAGGCAAATGAGCTTGAAAAGCTTTATGCAGAGCACAAACTTAGGGTTCCTGTGGATCAGTCTAGTTTCGCTCGTAGAAGCAAGCCTGTGGATATGAAGAAGGAAGAGGCAGTAAGTTCACAACATAGAAAGCCAGCAGTAGAGGAGATTCCTCCTGCACAATTTGTTGACACCAGAGTCATGGAACCTGTGGGTAGTTCTAGTAACATGGCAATCTTCAATACTCCACCATTGAAGGTACCAAGTAACCAGGACTATGGTGATACTCCAAAGCAGAATTTCTCCGAGGTTGGATTCTCTCTTGATTCTAAAGGAAAATTCTATGAGAGGTACATGCAGAAAAGAGATGCTAAGCTGAGAGAAGAATGGGGTTCCAAAAGAGAAGAGAAGGAGGCCAAGTTGAAGGCCATGGAAGATAGCCTTGAACAAAGTAGGGCAGAGTTAAATGCCAAATTTTCAGGGTCAGCAGACAGACAGGATTCAGTATCCAGTGCTCGTCGACGCGCTGAGAAGCTCAGATCATTTAATTTTCGATCTAGTATGAAAAAGGAGCAGCCATTAGATTCCGCCCCCTGGACCCCAACTGCACCAGCCCCTCGCTCATCAGCCAAAGTTTCCAACCTTAGTTCAGGGCGGCGAAGATTAGAATCAGATAATCCTCTTGTACAATCAGTTCCAAACTTTTCTGATTTAAGGAAAGAAAATACGAAGCCCTCTTCTGGAGTTAGCAAAGTAGCCGCTAGCAAAATAGCTGCTCGCTCACAGGTCAGAAGCTATTCCCGCAGCAAGAGTAGTACTGAAGATACAGTAATGTTCAAGGAAGAGAAGTCGCGGCGTTCTCAGTCCTTGAGGAAGAGTTCCGCTATTCCTGTAGAATTCAACACCTTGTCACCAATGAACTCTGATGGGGTTGTCTTGGTGCCATTAAGATTTGACAAAGAGCAAACTGAGCAGGGCCCTTATGACAAATTTCCAGAAATTGTGGAGTCAAAATCCTTTCTTAGGAAGGGTAATGGGATAGGTACTGGTTCCGGAGTAAGTATTTCTAAGCTGAAAGGTTTCATGGCATCTGAGACCAGGAACAATGAAGAAGAATTTGATGAATTGGCCTTTGAGGCAGAAGATGCAGTAGATATGGTCAAGGAAGAAGAAGAAGAGGAAGAACTTGAAATGATGGTAGTTGAGGATGATGTTGATATGGATATCGGAAAACCGAGATCTAGTCAGGAATCTGACAAGTCTGGTAACTCCGGGTCTGATAATGTCAATTCTGTAAGATCTCTTTCTCAAGCAGACCCCACATCAGTTGCCGAGTTGCCTGCTGCTGTGCCTTCAACATTTCATGCTGTGGGGTCTGTGCCAGGCTCACCAGGGGAAAGCCCCATGTCATGGAACTTACAGATGCATCATCCATTTTCCTACCAACATGAGACCTCTGATATTGATGCCTCTGTAGACTCTCCAATGGGCAGCCCTGCTTCTTGGAATTCTCATGGTCTTAGCCAAACAGATGTTGATGCAGCTCGAATGAGGAAGAAATGGGGAAGTGCTCAGAAACCTGTTCTTGCTACTAATTCATCACAAAATCAGTCACGCAAGGATATGACCAAAGGATTTAAACGGTTGTTAAAGTTCGGAAGAAAAAGTCGTGGGACAGATAATATGGCTGACTGGATCTCTGCTACGACTTCTGAAGGAGATGATGATACTGAAGATGGGCGAGATCCTGCCAACCGATCATCAGATGATTTGAGAAAGTCAAGAATGGGATTTGCACAGGGTCCCGATGATGGCTTCAATGAAACTGAGTTCAATGAAAGGGTTCAAGCATTAAGCTCTATCCCATCACCTCCGGTGAACTTTAAACTGAGGGAGGAGCATATTTCGGGAAGCTCATTAAAAGGTGATTGTGTATTAATGTTTTCATGTTTTTATATTTTTTGTGTCTTATTATTATTTGGATATTGTGGCTATACTGTCGGAAACAAAAATTTCTATGCTAGCCCTGTTTTGGCAGATGAACCTGAAGCTGTGAAGAGCTCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1376

Amino Acids

150.48

Weight (kDa)

6.12

Isoelectric Point (pI)

57.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1342
AasI GACNNNNNNGTC 2 cut(s) 653, 2261
Acc36I ACCTGC 6 cut(s) 145, 901, 1003, 1342, 1390, 1897
Acc65I GGTACC 1 cut(s) 2323
AccB1I GGYRCC 4 cut(s) 554, 1033, 2323, 3004
AccB7I CCANNNNNTGG 2 cut(s) 1574, 3474
AccBSI CCGCTC 1 cut(s) 1062
AccI GTMKAC 2 cut(s) 2584, 3540
AccII CGCG 2 cut(s) 2589, 2917
AccIII TCCGGA 1 cut(s) 3116
AclI AACGTT 1 cut(s) 875
AclWI GGATC 5 cut(s) 474, 1491, 2148, 3767, 3803
AcoI YGGCCR 2 cut(s) 1041, 1249
AcsI RAATTY 9 cut(s) 1877, 2362, 2402, 2537, 2960, 3053, 3179, 3571, 4075
AcuI CTGAAG 5 cut(s) 1704, 2904, 3798, 3816, 4131
AcvI CACGTG 1 cut(s) 747
AcyI GRCGYC 1 cut(s) 1034
AfaI GTAC 9 cut(s) 262, 273, 444, 580, 2325, 2417, 2751, 2881, 3109
AflIII ACRYGT 2 cut(s) 678, 746
AjnI CCWGG 9 cut(s) 634, 912, 1551, 1650, 2334, 2657, 3161, 3445, 3454
Alw21I GWGCWC 8 cut(s) 487, 1005, 1127, 1567, 2121, 2581, 3637, 4127
Alw26I GTCTC 4 cut(s) 526, 1493, 3152, 3509
Alw44I GTGCAC 1 cut(s) 1123
AlwI GGATC 5 cut(s) 474, 1491, 2148, 3767, 3803
AlwNI CAGNNNCTG 1 cut(s) 1768
Ama87I CYCGRG 1 cut(s) 1672
Aor13HI TCCGGA 1 cut(s) 3116
AoxI GGCC 6 cut(s) 1041, 1249, 2478, 2490, 3040, 3192
ApaI GGGCCC 1 cut(s) 3044
ApaLI GTGCAC 1 cut(s) 1123
ApoI RAATTY 9 cut(s) 1877, 2362, 2402, 2537, 2960, 3053, 3179, 3571, 4075
AseI ATTAAT 1 cut(s) 4001
Asp700I GAANNNNTTC 5 cut(s) 218, 334, 2860, 3143, 3906
Asp718I GGTACC 1 cut(s) 2323
AspA2I CCTAGG 1 cut(s) 1640
AspLEI GCGC 3 cut(s) 1036, 1210, 2591
AspS9I GGNCC 6 cut(s) 916, 1198, 2661, 3040, 3041, 3866
AsuC2I CCSGG 2 cut(s) 1491, 3337
AsuNHI GCTAGC 3 cut(s) 100, 2825, 4085
AvaI CYCGRG 1 cut(s) 1672
AvaII GGWCC 4 cut(s) 916, 1198, 2661, 3866
AvrII CCTAGG 1 cut(s) 1640
BaeGI GKGCMC 3 cut(s) 559, 1127, 3044
BalI TGGCCA 1 cut(s) 1251
BanI GGYRCC 4 cut(s) 554, 1033, 2323, 3004
BanII GRGCYC 4 cut(s) 1005, 1118, 3044, 4127
BauI CACGAG 1 cut(s) 486
BbrPI CACGTG 1 cut(s) 747
BbsI GAAGAC 5 cut(s) 708, 732, 819, 1352, 1371
Bbv12I GWGCWC 8 cut(s) 487, 1005, 1127, 1567, 2121, 2581, 3637, 4127
BceAI ACGGC 3 cut(s) 461, 838, 1028
BcgI CGANNNNNNTGC 4 cut(s) 648, 682, 3386, 3420
BciT130I CCWGG 9 cut(s) 636, 914, 1553, 1652, 2336, 2659, 3163, 3447, 3456
BciVI GTATCC 1 cut(s) 2581
BclI TGATCA 3 cut(s) 618, 1414, 1747
BcnI CCSGG 2 cut(s) 1491, 3337
BcoDI GTCTC 4 cut(s) 526, 1493, 3152, 3509
BfmI CTRYAG 4 cut(s) 996, 1509, 2955, 3537
BfoI RGCGCY 2 cut(s) 1037, 1211
BfuAI ACCTGC 6 cut(s) 145, 901, 1003, 1342, 1390, 1897
BfuI GTATCC 1 cut(s) 2581
BglI GCCNNNNNGGC 1 cut(s) 3200
BglII AGATCT 2 cut(s) 3302, 3362
BlnI CCTAGG 1 cut(s) 1640
BlpI GCTNAGC 2 cut(s) 905, 2436
BmcAI AGTACT 1 cut(s) 2881
Bme18I GGWCC 4 cut(s) 916, 1198, 2661, 3866
BmeT110I CYCGRG 1 cut(s) 1672
BmgT120I GGNCC 6 cut(s) 916, 1198, 2661, 3040, 3041, 3866
BmrI ACTGGG 1 cut(s) 720
BmtI GCTAGC 3 cut(s) 104, 2829, 4089
BmuI ACTGGG 1 cut(s) 720
BpiI GAAGAC 5 cut(s) 708, 732, 819, 1352, 1371
BpmI CTGGAG 2 cut(s) 1806, 2826
Bpu1102I GCTNAGC 2 cut(s) 905, 2436
BpuEI CTTGAG 5 cut(s) 206, 1814, 2069, 2953, 3357
BpuMI CCSGG 2 cut(s) 1491, 3337
Bsa29I ATCGAT 1 cut(s) 687
BsaAI YACGTR 1 cut(s) 747
BsaBI GATNNNNATC 1 cut(s) 2731
BsaHI GRCGYC 1 cut(s) 1034
BsaI GGTCTC 2 cut(s) 3152, 3509
BsaJI CCNNGG 9 cut(s) 626, 1275, 1640, 1651, 2049, 2370, 2493, 2657, 3455
BsaWI WCCGGW 4 cut(s) 265, 1200, 3116, 3937
BsaXI ACNNNNNCTCC 4 cut(s) 1307, 1337, 2468, 2498
Bse1I ACTGG 8 cut(s) 37, 285, 715, 961, 1899, 2574, 3115, 3761
Bse8I GATNNNNATC 1 cut(s) 2731
BseAI TCCGGA 1 cut(s) 3116
BseBI CCWGG 9 cut(s) 636, 914, 1553, 1652, 2336, 2659, 3163, 3447, 3456
BseCI ATCGAT 1 cut(s) 687
BseDI CCNNGG 9 cut(s) 626, 1275, 1640, 1651, 2049, 2370, 2493, 2657, 3455
BseGI GGATG 7 cut(s) 385, 740, 1130, 1636, 1737, 3277, 3493
BseJI GATNNNNATC 1 cut(s) 2731
BseNI ACTGG 8 cut(s) 37, 285, 715, 961, 1899, 2574, 3115, 3761
BseRI GAGGAG 7 cut(s) 164, 1325, 1328, 1811, 1814, 2243, 3974
BseSI GKGCMC 3 cut(s) 559, 1127, 3044
BseX3I CGGCCG 1 cut(s) 1041
BseYI CCCAGC 2 cut(s) 1292, 1761
BsgI GTGCAG 3 cut(s) 306, 2226, 2655
Bsh1236I CGCG 2 cut(s) 2589, 2917
Bsh1285I CGRYCG 1 cut(s) 1044
BshFI GGCC 6 cut(s) 1043, 1251, 2480, 2492, 3042, 3194
BshNI GGYRCC 4 cut(s) 554, 1033, 2323, 3004
BshVI ATCGAT 1 cut(s) 687
BsiEI CGRYCG 1 cut(s) 1044
BsiHKAI GWGCWC 8 cut(s) 487, 1005, 1127, 1567, 2121, 2581, 3637, 4127
BsiHKCI CYCGRG 1 cut(s) 1672
BsiSI CCGG 7 cut(s) 266, 1006, 1201, 1491, 3117, 3336, 3938
BslFI GGGAC 3 cut(s) 292, 3751, 3852
BsmAI GTCTC 4 cut(s) 526, 1493, 3152, 3509
BsmFI GGGAC 3 cut(s) 292, 3751, 3852
BsmI GAATGC 1 cut(s) 52
BsnI GGCC 6 cut(s) 1043, 1251, 2480, 2492, 3042, 3194
Bso31I GGTCTC 2 cut(s) 3152, 3509
BsoBI CYCGRG 1 cut(s) 1672
Bsp120I GGGCCC 1 cut(s) 3040
Bsp13I TCCGGA 1 cut(s) 3116
Bsp1407I TGTACA 1 cut(s) 2749
Bsp1720I GCTNAGC 2 cut(s) 905, 2436
Bsp19I CCATGG 2 cut(s) 626, 2493
BspANI GGCC 6 cut(s) 1043, 1251, 2480, 2492, 3042, 3194
BspDI ATCGAT 1 cut(s) 687
BspEI TCCGGA 1 cut(s) 3116
BspFNI CGCG 2 cut(s) 2589, 2917
BspMAI CTGCAG 1 cut(s) 1000
BspMI ACCTGC 6 cut(s) 145, 901, 1003, 1342, 1390, 1897
BspOI GCTAGC 3 cut(s) 104, 2829, 4089
BspPI GGATC 5 cut(s) 474, 1491, 2148, 3767, 3803
BspQI GCTCTTC 1 cut(s) 4115
BspT107I GGYRCC 4 cut(s) 554, 1033, 2323, 3004
BspTNI GGTCTC 2 cut(s) 3152, 3509
BsrBI CCGCTC 1 cut(s) 1062
BsrGI TGTACA 1 cut(s) 2749
BsrI ACTGG 8 cut(s) 37, 285, 715, 961, 1899, 2574, 3115, 3761
BssECI CCNNGG 9 cut(s) 626, 1275, 1640, 1651, 2049, 2370, 2493, 2657, 3455
BssNI GRCGYC 1 cut(s) 1034
BssSI CACGAG 1 cut(s) 486
BssT1I CCWWGG 4 cut(s) 626, 1640, 2049, 2493
Bst2BI CACGAG 1 cut(s) 486
Bst2UI CCWGG 9 cut(s) 636, 914, 1553, 1652, 2336, 2659, 3163, 3447, 3456
Bst4CI ACNGT 7 cut(s) 520, 950, 1506, 1585, 2893, 3708, 4063
Bst6I CTCTTC 9 cut(s) 1302, 1723, 2184, 2463, 2806, 2901, 2933, 3234, 4115
BstACI GRCGYC 1 cut(s) 1034
BstAPI GCANNNNNTGC 3 cut(s) 497, 1535, 3209
BstAUI TGTACA 1 cut(s) 2749
BstBAI YACGTR 1 cut(s) 747
BstDSI CCRYGG 2 cut(s) 626, 2493
BstENI CCTNNNNNAGG 1 cut(s) 3085
BstF5I GGATG 7 cut(s) 385, 740, 1130, 1636, 1737, 3277, 3493
BstFNI CGCG 2 cut(s) 2589, 2917
BstH2I RGCGCY 2 cut(s) 1037, 1211
BstHHI GCGC 3 cut(s) 1036, 1210, 2591
BstMAI GTCTC 4 cut(s) 526, 1493, 3152, 3509
BstMCI CGRYCG 1 cut(s) 1044
BstNI CCWGG 9 cut(s) 636, 914, 1553, 1652, 2336, 2659, 3163, 3447, 3456
BstNSI RCATGY 3 cut(s) 209, 682, 2422
BstSFI CTRYAG 4 cut(s) 996, 1509, 2955, 3537
BstSLI GKGCMC 3 cut(s) 559, 1127, 3044
BstUI CGCG 2 cut(s) 2589, 2917
BstV2I GAAGAC 5 cut(s) 708, 732, 819, 1352, 1371
BstX2I RGATCY 5 cut(s) 466, 3302, 3362, 3759, 3808
BstXI CCANNNNNNTGG 3 cut(s) 841, 2266, 2342
BstYI RGATCY 5 cut(s) 466, 3302, 3362, 3759, 3808
BstZI CGGCCG 1 cut(s) 1041
Bsu15I ATCGAT 1 cut(s) 687
BsuI GTATCC 1 cut(s) 2581
BsuRI GGCC 6 cut(s) 1043, 1251, 2480, 2492, 3042, 3194
BsuTUI ATCGAT 1 cut(s) 687
BtgI CCRYGG 2 cut(s) 626, 2493
BtgZI GCGATG 1 cut(s) 657
BtsCI GGATG 7 cut(s) 385, 740, 1130, 1636, 1737, 3277, 3493
BtsI GCAGTG 1 cut(s) 462
BtsIMutI CAGTG 5 cut(s) 90, 462, 1107, 1989, 2581
BveI ACCTGC 6 cut(s) 145, 901, 1003, 1342, 1390, 1897
CaiI CAGNNNCTG 1 cut(s) 1768
CfoI GCGC 3 cut(s) 1036, 1210, 2591
Cfr13I GGNCC 6 cut(s) 916, 1198, 2661, 3040, 3041, 3866
ClaI ATCGAT 1 cut(s) 687
CseI GACGC 4 cut(s) 93, 898, 1357, 2595
CsiI ACCWGGT 1 cut(s) 1551
Csp6I GTAC 9 cut(s) 261, 272, 443, 579, 2324, 2416, 2750, 2880, 3108
CspCI CAANNNNNGTGG 2 cut(s) 3373, 3408
CviQI GTAC 9 cut(s) 261, 272, 443, 579, 2324, 2416, 2750, 2880, 3108
DinI GGCGCC 1 cut(s) 1035
DraI TTTAAA 3 cut(s) 138, 3703, 3949
DrdI GACNNNNNNGTC 2 cut(s) 653, 2261
DseDI GACNNNNNNGTC 2 cut(s) 653, 2261
EaeI YGGCCR 2 cut(s) 1041, 1249
EagI CGGCCG 1 cut(s) 1041
Eam1104I CTCTTC 9 cut(s) 1302, 1723, 2184, 2463, 2806, 2901, 2933, 3234, 4115
EarI CTCTTC 9 cut(s) 1302, 1723, 2184, 2463, 2806, 2901, 2933, 3234, 4115
EciI GGCGGA 1 cut(s) 2641
Ecl136II GAGCTC 2 cut(s) 1003, 4125
EclXI CGGCCG 1 cut(s) 1041
Eco130I CCWWGG 4 cut(s) 626, 1640, 2049, 2493
Eco24I GRGCYC 4 cut(s) 1005, 1118, 3044, 4127
Eco31I GGTCTC 2 cut(s) 3152, 3509
Eco32I GATATC 1 cut(s) 3289
Eco47I GGWCC 4 cut(s) 916, 1198, 2661, 3866
Eco52I CGGCCG 1 cut(s) 1041
Eco53kI GAGCTC 2 cut(s) 1003, 4125
Eco57I CTGAAG 5 cut(s) 1704, 2904, 3798, 3816, 4131
Eco72I CACGTG 1 cut(s) 747
Eco88I CYCGRG 1 cut(s) 1672
EcoICRI GAGCTC 2 cut(s) 1003, 4125
EcoNI CCTNNNNNAGG 1 cut(s) 3085
EcoO109I RGGNCCY 3 cut(s) 3040, 3041, 3866
EcoRI GAATTC 2 cut(s) 2960, 3571
EcoRII CCWGG 9 cut(s) 634, 912, 1551, 1650, 2334, 2657, 3161, 3445, 3454
EcoRV GATATC 1 cut(s) 3289
EcoT14I CCWWGG 4 cut(s) 626, 1640, 2049, 2493
EcoT22I ATGCAT 1 cut(s) 3492
EcoT38I GRGCYC 4 cut(s) 1005, 1118, 3044, 4127
EgeI GGCGCC 1 cut(s) 1035
EheI GGCGCC 1 cut(s) 1035
ErhI CCWWGG 4 cut(s) 626, 1640, 2049, 2493
FalI AAGNNNNNCTT 6 cut(s) 219, 251, 1983, 2015, 2490, 2522
FaqI GGGAC 3 cut(s) 292, 3751, 3852
FauI CCCGC 1 cut(s) 2873
FbaI TGATCA 3 cut(s) 618, 1414, 1747
FblI GTMKAC 2 cut(s) 2584, 3540
FokI GGATG 7 cut(s) 392, 727, 1117, 1623, 1724, 3284, 3480
FriOI GRGCYC 4 cut(s) 1005, 1118, 3044, 4127
GlaI GCGC 3 cut(s) 1035, 1209, 2590
GsaI CCCAGC 2 cut(s) 1296, 1765
GsuI CTGGAG 2 cut(s) 1806, 2826
HaeII RGCGCY 2 cut(s) 1037, 1211
HaeIII GGCC 6 cut(s) 1043, 1251, 2480, 2492, 3042, 3194
HapII CCGG 7 cut(s) 266, 1006, 1201, 1491, 3117, 3336, 3938
HgaI GACGC 4 cut(s) 93, 898, 1357, 2595
HhaI GCGC 3 cut(s) 1036, 1210, 2591
Hin1I GRCGYC 1 cut(s) 1034
Hin6I GCGC 3 cut(s) 1034, 1208, 2589
HinP1I GCGC 3 cut(s) 1034, 1208, 2589
HincII GTYRAC 6 cut(s) 193, 356, 752, 2013, 2254, 2585
HindII GTYRAC 6 cut(s) 193, 356, 752, 2013, 2254, 2585
HindIII AAGCTT 1 cut(s) 2105
HpaII CCGG 7 cut(s) 266, 1006, 1201, 1491, 3117, 3336, 3938
Hpy99I CGWCG 2 cut(s) 2586, 2589
HpyCH4III ACNGT 7 cut(s) 520, 950, 1506, 1585, 2893, 3708, 4063
HpyCH4IV ACGT 5 cut(s) 199, 746, 793, 801, 875
HpySE526I ACGT 5 cut(s) 199, 746, 793, 801, 875
Hsp92I GRCGYC 1 cut(s) 1034
HspAI GCGC 3 cut(s) 1034, 1208, 2589
KasI GGCGCC 1 cut(s) 1033
KflI GGGWCCC 1 cut(s) 3866
Kpn2I TCCGGA 1 cut(s) 3116
KpnI GGTACC 1 cut(s) 2327
Ksp22I TGATCA 3 cut(s) 618, 1414, 1747
LguI GCTCTTC 1 cut(s) 4115
LmnI GCTCC 7 cut(s) 151, 421, 1008, 1059, 1570, 2635, 3961
MabI ACCWGGT 1 cut(s) 1551
MaeII ACGT 5 cut(s) 199, 746, 793, 801, 875
MbiI CCGCTC 1 cut(s) 1062
MfeI CAATTG 1 cut(s) 311
MflI RGATCY 5 cut(s) 466, 3302, 3362, 3759, 3808
MlsI TGGCCA 1 cut(s) 1251
MluNI TGGCCA 1 cut(s) 1251
Mly113I GGCGCC 1 cut(s) 1034
MlyI GAGTC 8 cut(s) 645, 680, 877, 1211, 1621, 2271, 3080, 3536
MmeI TCCRAC 4 cut(s) 1938, 2356, 2727, 4045
Mox20I TGGCCA 1 cut(s) 1251
Mph1103I ATGCAT 1 cut(s) 3492
MroI TCCGGA 1 cut(s) 3116
MroXI GAANNNNTTC 5 cut(s) 218, 334, 2860, 3143, 3906
MscI TGGCCA 1 cut(s) 1251
MslI CAYNNNNRTG 1 cut(s) 745
Msp20I TGGCCA 1 cut(s) 1251
MspA1I CMGCKG 2 cut(s) 966, 1532
MspI CCGG 7 cut(s) 266, 1006, 1201, 1491, 3117, 3336, 3938
MunI CAATTG 1 cut(s) 311
Mva1269I GAATGC 1 cut(s) 52
MvaI CCWGG 9 cut(s) 636, 914, 1553, 1652, 2336, 2659, 3163, 3447, 3456
MvnI CGCG 2 cut(s) 2589, 2917
NarI GGCGCC 1 cut(s) 1034
NciI CCSGG 2 cut(s) 1491, 3337
NcoI CCATGG 2 cut(s) 626, 2493
NheI GCTAGC 3 cut(s) 100, 2825, 4085
NmeAIII GCCGAG 2 cut(s) 1300, 3421
NmuCI GTSAC 5 cut(s) 42, 1070, 1920, 2973, 3675
NsiI ATGCAT 1 cut(s) 3492
NspI RCATGY 3 cut(s) 209, 682, 2422
PaqCI CACCTGC 1 cut(s) 1342
PciI ACATGT 1 cut(s) 678
PciSI GCTCTTC 1 cut(s) 4115
PcsI WCGNNNNNNNCGW 1 cut(s) 1226
PctI GAATGC 1 cut(s) 52
PdmI GAANNNNTTC 5 cut(s) 218, 334, 2860, 3143, 3906
PflFI GACNNNGTC 1 cut(s) 1504
PflMI CCANNNNNTGG 2 cut(s) 1574, 3474
PfoI TCCNGGA 1 cut(s) 912
PleI GAGTC 8 cut(s) 645, 679, 877, 1211, 1621, 2270, 3079, 3536
PluTI GGCGCC 1 cut(s) 1037
PmaCI CACGTG 1 cut(s) 747
PmlI CACGTG 1 cut(s) 747
PpsI GAGTC 8 cut(s) 645, 679, 877, 1211, 1621, 2270, 3079, 3536
Ppu21I YACGTR 1 cut(s) 747
PpuMI RGGWCCY 1 cut(s) 3866
PscI ACATGT 1 cut(s) 678
PshBI ATTAAT 1 cut(s) 4001
Psp124BI GAGCTC 2 cut(s) 1005, 4127
Psp1406I AACGTT 1 cut(s) 875
Psp5II RGGWCCY 1 cut(s) 3866
Psp6I CCWGG 9 cut(s) 634, 912, 1551, 1650, 2334, 2657, 3161, 3445, 3454
PspCI CACGTG 1 cut(s) 747
PspFI CCCAGC 2 cut(s) 1292, 1761
PspGI CCWGG 9 cut(s) 634, 912, 1551, 1650, 2334, 2657, 3161, 3445, 3454
PspOMI GGGCCC 1 cut(s) 3040
PspPI GGNCC 6 cut(s) 916, 1198, 2661, 3040, 3041, 3866
PspPPI RGGWCCY 1 cut(s) 3866
PsrI GAACNNNNNNTAC 4 cut(s) 2013, 2045, 2742, 2774
PstI CTGCAG 1 cut(s) 1000
PstNI CAGNNNCTG 1 cut(s) 1768
PsuI RGATCY 5 cut(s) 466, 3302, 3362, 3759, 3808
PsyI GACNNNGTC 1 cut(s) 1504
RsaI GTAC 9 cut(s) 262, 273, 444, 580, 2325, 2417, 2751, 2881, 3109
RsaNI GTAC 9 cut(s) 261, 272, 443, 579, 2324, 2416, 2750, 2880, 3108
RseI CAYNNNNRTG 1 cut(s) 745
SacI GAGCTC 2 cut(s) 1005, 4127
SalI GTCGAC 1 cut(s) 2583
SapI GCTCTTC 1 cut(s) 4115
Sau96I GGNCC 6 cut(s) 916, 1198, 2661, 3040, 3041, 3866
ScaI AGTACT 1 cut(s) 2881
SchI GAGTC 8 cut(s) 645, 680, 877, 1211, 1621, 2271, 3080, 3536
SexAI ACCWGGT 1 cut(s) 1551
SfcI CTRYAG 4 cut(s) 996, 1509, 2955, 3537
SfoI GGCGCC 1 cut(s) 1035
SgrDI CGTCGACG 1 cut(s) 2583
SinI GGWCC 4 cut(s) 916, 1198, 2661, 3866
SmiMI CAYNNNNRTG 1 cut(s) 745
SmlI CTYRAG 5 cut(s) 185, 1793, 2084, 2932, 3372
SmoI CTYRAG 5 cut(s) 185, 1793, 2084, 2932, 3372
SspDI GGCGCC 1 cut(s) 1033
SstI GAGCTC 2 cut(s) 1005, 4127
StyI CCWWGG 4 cut(s) 626, 1640, 2049, 2493
TaaI ACNGT 7 cut(s) 520, 950, 1506, 1585, 2893, 3708, 4063
TaiI ACGT 5 cut(s) 202, 749, 796, 804, 878
TaqI TCGA 6 cut(s) 687, 1229, 1610, 2584, 2617, 3610
TaqII GACCGA 1 cut(s) 881
TatI WGTACW 4 cut(s) 260, 578, 2749, 2879
TauI GCSGC 7 cut(s) 404, 975, 1012, 1043, 2722, 2825, 2920
TscAI CASTG 5 cut(s) 97, 462, 1114, 1989, 2581
TseFI GTSAC 5 cut(s) 42, 1070, 1920, 2973, 3675
Tsp45I GTSAC 5 cut(s) 42, 1070, 1920, 2973, 3675
TspGWI ACGGA 2 cut(s) 340, 754
TspRI CASTG 5 cut(s) 97, 462, 1114, 1989, 2581
Tth111I GACNNNGTC 1 cut(s) 1504
Van91I CCANNNNNTGG 2 cut(s) 1574, 3474
VneI GTGCAC 1 cut(s) 1123
VpaK11BI GGWCC 4 cut(s) 916, 1198, 2661, 3866
VspI ATTAAT 1 cut(s) 4001
XagI CCTNNNNNAGG 1 cut(s) 3085
XapI RAATTY 9 cut(s) 1877, 2362, 2402, 2537, 2960, 3053, 3179, 3571, 4075
XbaI TCTAGA 3 cut(s) 721, 1429, 1604
XceI RCATGY 3 cut(s) 209, 682, 2422
XmaJI CCTAGG 1 cut(s) 1640
XmiI GTMKAC 2 cut(s) 2584, 3540
XmnI GAANNNNTTC 5 cut(s) 218, 334, 2860, 3143, 3906
ZrmI AGTACT 1 cut(s) 2881
Zsp2I ATGCAT 1 cut(s) 3492
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.