BEST Arabidopsis thaliana protein match is COP1-interacting protein-related (TAIR AT1G72410.1)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G14172 AT3G14172 AT3G14172 |
| fragaria_vesca | FvH4_6g35280 FvH4_6g35280 FvH4_6g35280 |
| malus_domestica | MD09G1177000.v1.1 MD17G1149300.v1.1 |
| prunus_persica | Prupe.3G036100_v2.0.a1 Prupe.3G036100_v2.0.a1 Prupe.3G036100_v2.0.a1 |
| pyrus_communis | pycom09g09520 pycom17g14310 |
| rosa_chinensis | RchiOBHm_Chr2g0146661 |
| rosa_laevigata | RLG00000020212 |
| rosa_multiflora | Rmu_co8402929.1_g000001 Rmu_sc0001986.1_g000037 Rmu_sc0015720.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00099980 |
| rosa_rugosa | Rorug02G0395900 |
| rosa_samantha | Rh2AG452200 Rh2BG465100 Rh2CG439200 Rh2DG474100 |
| rosa_wichuraiana | Rw2G036940 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 653 |
| AatII | GACGTC | 2 cut(s) | 1068, 1901 |
| AbsI | CCTCGAGG | 1 cut(s) | 3181 |
| Acc36I | ACCTGC | 4 cut(s) | 145, 1465, 2320, 3097 |
| AccB1I | GGYRCC | 4 cut(s) | 554, 1103, 1831, 3253 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 2757, 2910, 3708 |
| AccBSI | CCGCTC | 2 cut(s) | 1101, 3842 |
| AccI | GTMKAC | 3 cut(s) | 642, 908, 2028 |
| AccII | CGCG | 2 cut(s) | 935, 4231 |
| AccIII | TCCGGA | 1 cut(s) | 1047 |
| AclWI | GGATC | 7 cut(s) | 603, 654, 1566, 2697, 4001, 4037, 4206 |
| AcoI | YGGCCR | 1 cut(s) | 1248 |
| AcsI | RAATTY | 9 cut(s) | 584, 1952, 2461, 2890, 2948, 3209, 3290, 3413, 3805 |
| AcuI | CTGAAG | 7 cut(s) | 288, 1509, 1535, 1779, 3039, 3606, 4032 |
| AcvI | CACGTG | 1 cut(s) | 786 |
| AcyI | GRCGYC | 3 cut(s) | 911, 1065, 1898 |
| AfaI | GTAC | 5 cut(s) | 273, 444, 2516, 2804, 3346 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 939, 1449, 1963, 2757, 2910, 3056, 3708, 4264 |
| AflIII | ACRYGT | 2 cut(s) | 678, 785 |
| AgeI | ACCGGT | 1 cut(s) | 1963 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1897 |
| AjiI | CACGTC | 3 cut(s) | 616, 801, 2687 |
| AjnI | CCWGG | 9 cut(s) | 1448, 1626, 1725, 2224, 2433, 2473, 2788, 3543, 3688 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2362, 2394 |
| Alw21I | GWGCWC | 7 cut(s) | 487, 1047, 1157, 1166, 1942, 2680, 3871 |
| Alw26I | GTCTC | 9 cut(s) | 206, 526, 852, 1072, 1139, 3228, 3389, 3678, 3743 |
| Alw44I | GTGCAC | 1 cut(s) | 1162 |
| AlwI | GGATC | 7 cut(s) | 603, 654, 1566, 2697, 4001, 4037, 4206 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 3629 |
| Ama87I | CYCGRG | 2 cut(s) | 873, 3181 |
| Aor13HI | TCCGGA | 1 cut(s) | 1047 |
| AoxI | GGCC | 6 cut(s) | 713, 870, 1248, 2589, 2631, 2791 |
| ApaI | GGGCCC | 1 cut(s) | 717 |
| ApaLI | GTGCAC | 1 cut(s) | 1162 |
| ApoI | RAATTY | 9 cut(s) | 584, 1952, 2461, 2890, 2948, 3209, 3290, 3413, 3805 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 4043, 4075 |
| AseI | ATTAAT | 1 cut(s) | 2073 |
| AsiGI | ACCGGT | 1 cut(s) | 1963 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 334 |
| AspLEI | GCGC | 2 cut(s) | 1078, 2932 |
| AsuC2I | CCSGG | 2 cut(s) | 874, 875 |
| AsuHPI | GGTGA | 6 cut(s) | 36, 1343, 1426, 2069, 2456, 3998 |
| AvaI | CYCGRG | 2 cut(s) | 873, 3181 |
| AvaII | GGWCC | 8 cut(s) | 955, 1261, 1452, 2429, 2773, 2913, 3381, 3613 |
| BaeGI | GKGCMC | 5 cut(s) | 559, 717, 1166, 1834, 4103 |
| BanI | GGYRCC | 4 cut(s) | 554, 1103, 1831, 3253 |
| BanII | GRGCYC | 6 cut(s) | 717, 897, 1047, 1157, 1942, 3794 |
| BauI | CACGAG | 2 cut(s) | 486, 664 |
| BbrPI | CACGTG | 1 cut(s) | 786 |
| BbsI | GAAGAC | 7 cut(s) | 708, 771, 870, 1935, 2697, 2889, 2983 |
| Bbv12I | GWGCWC | 7 cut(s) | 487, 1047, 1157, 1166, 1942, 2680, 3871 |
| BccI | CCATC | 8 cut(s) | 778, 1089, 2356, 2416, 2837, 3233, 4028, 4169 |
| BceAI | ACGGC | 1 cut(s) | 3182 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 288, 322, 1112, 1146 |
| BciT130I | CCWGG | 9 cut(s) | 1450, 1628, 1727, 2226, 2435, 2475, 2790, 3545, 3690 |
| BclI | TGATCA | 3 cut(s) | 618, 1489, 1822 |
| BcnI | CCSGG | 2 cut(s) | 874, 875 |
| BcoDI | GTCTC | 9 cut(s) | 206, 526, 852, 1072, 1139, 3228, 3389, 3678, 3743 |
| BfmI | CTRYAG | 3 cut(s) | 2313, 3204, 3771 |
| BfoI | RGCGCY | 1 cut(s) | 2933 |
| BfuAI | ACCTGC | 4 cut(s) | 145, 1465, 2320, 3097 |
| BglII | AGATCT | 4 cut(s) | 1850, 1864, 2717, 3596 |
| BlpI | GCTNAGC | 1 cut(s) | 944 |
| BmcAI | AGTACT | 1 cut(s) | 273 |
| Bme18I | GGWCC | 8 cut(s) | 955, 1261, 1452, 2429, 2773, 2913, 3381, 3613 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1897 |
| BmeT110I | CYCGRG | 2 cut(s) | 873, 3181 |
| BmgBI | CACGTC | 3 cut(s) | 616, 801, 2687 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1370 |
| BpiI | GAAGAC | 7 cut(s) | 708, 771, 870, 1935, 2697, 2889, 2983 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2762, 2794 |
| BpmI | CTGGAG | 4 cut(s) | 1867, 1881, 1956, 3375 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 944 |
| BpuEI | CTTGAG | 3 cut(s) | 206, 2627, 3591 |
| BpuMI | CCSGG | 2 cut(s) | 874, 875 |
| Bsa29I | ATCGAT | 3 cut(s) | 438, 1122, 2815 |
| BsaAI | YACGTR | 1 cut(s) | 786 |
| BsaHI | GRCGYC | 3 cut(s) | 911, 1065, 1898 |
| BsaI | GGTCTC | 2 cut(s) | 3678, 3743 |
| BsaWI | WCCGGW | 3 cut(s) | 1047, 1263, 1963 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1391, 1421 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 939, 1449, 1963, 2757, 2910, 3056, 3708, 4264 |
| Bse118I | RCCGGY | 2 cut(s) | 1963, 3637 |
| Bse1I | ACTGG | 9 cut(s) | 279, 285, 1005, 1107, 1850, 2108, 2915, 3352, 3995 |
| Bse3DI | GCAATG | 1 cut(s) | 559 |
| BseAI | TCCGGA | 1 cut(s) | 1047 |
| BseBI | CCWGG | 9 cut(s) | 1450, 1628, 1727, 2226, 2435, 2475, 2790, 3545, 3690 |
| BseCI | ATCGAT | 3 cut(s) | 438, 1122, 2815 |
| BseGI | GGATG | 6 cut(s) | 793, 2272, 2773, 3244, 3727, 4161 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 939, 1449, 1963, 2757, 2910, 3056, 3708, 4264 |
| BseMI | GCAATG | 1 cut(s) | 559 |
| BseNI | ACTGG | 9 cut(s) | 279, 285, 1005, 1107, 1850, 2108, 2915, 3352, 3995 |
| BseRI | GAGGAG | 6 cut(s) | 164, 1048, 1409, 1412, 2336, 3216 |
| BseSI | GKGCMC | 5 cut(s) | 559, 717, 1166, 1834, 4103 |
| BseYI | CCCAGC | 3 cut(s) | 1836, 2917, 4165 |
| BsgI | GTGCAG | 4 cut(s) | 971, 1152, 2319, 2907 |
| Bsh1236I | CGCG | 2 cut(s) | 935, 4231 |
| BshFI | GGCC | 6 cut(s) | 715, 872, 1250, 2591, 2633, 2793 |
| BshNI | GGYRCC | 4 cut(s) | 554, 1103, 1831, 3253 |
| BshTI | ACCGGT | 1 cut(s) | 1963 |
| BshVI | ATCGAT | 3 cut(s) | 438, 1122, 2815 |
| BsiHKAI | GWGCWC | 7 cut(s) | 487, 1047, 1157, 1166, 1942, 2680, 3871 |
| BsiHKCI | CYCGRG | 2 cut(s) | 873, 3181 |
| BsiSI | CCGG | 5 cut(s) | 874, 1048, 1264, 1964, 3638 |
| BslFI | GGGAC | 3 cut(s) | 787, 1240, 2415 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 939, 1449, 1963, 2757, 2910, 3056, 3708, 4264 |
| BsmAI | GTCTC | 9 cut(s) | 206, 526, 852, 1072, 1139, 3228, 3389, 3678, 3743 |
| BsmBI | CGTCTC | 3 cut(s) | 852, 1072, 1139 |
| BsmFI | GGGAC | 3 cut(s) | 787, 1240, 2415 |
| BsmI | GAATGC | 1 cut(s) | 2859 |
| BsnI | GGCC | 6 cut(s) | 715, 872, 1250, 2591, 2633, 2793 |
| Bso31I | GGTCTC | 2 cut(s) | 3678, 3743 |
| BsoBI | CYCGRG | 2 cut(s) | 873, 3181 |
| Bsp120I | GGGCCC | 1 cut(s) | 713 |
| Bsp13I | TCCGGA | 1 cut(s) | 1047 |
| Bsp1407I | TGTACA | 1 cut(s) | 2802 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 944 |
| Bsp19I | CCATGG | 3 cut(s) | 626, 2592, 3384 |
| BspANI | GGCC | 6 cut(s) | 715, 872, 1250, 2591, 2633, 2793 |
| BspDI | ATCGAT | 3 cut(s) | 438, 1122, 2815 |
| BspEI | TCCGGA | 1 cut(s) | 1047 |
| BspFNI | CGCG | 2 cut(s) | 935, 4231 |
| BspMAI | CTGCAG | 2 cut(s) | 2317, 3775 |
| BspMI | ACCTGC | 4 cut(s) | 145, 1465, 2320, 3097 |
| BspPI | GGATC | 7 cut(s) | 603, 654, 1566, 2697, 4001, 4037, 4206 |
| BspQI | GCTCTTC | 1 cut(s) | 3474 |
| BspT107I | GGYRCC | 4 cut(s) | 554, 1103, 1831, 3253 |
| BspTNI | GGTCTC | 2 cut(s) | 3678, 3743 |
| BsrBI | CCGCTC | 2 cut(s) | 1101, 3842 |
| BsrDI | GCAATG | 1 cut(s) | 559 |
| BsrFI | RCCGGY | 2 cut(s) | 1963, 3637 |
| BsrGI | TGTACA | 1 cut(s) | 2802 |
| BsrI | ACTGG | 9 cut(s) | 279, 285, 1005, 1107, 1850, 2108, 2915, 3352, 3995 |
| BssAI | RCCGGY | 2 cut(s) | 1963, 3637 |
| BssNAI | GTATAC | 1 cut(s) | 2029 |
| BssNI | GRCGYC | 3 cut(s) | 911, 1065, 1898 |
| BssSI | CACGAG | 2 cut(s) | 486, 664 |
| BssT1I | CCWWGG | 3 cut(s) | 626, 2592, 3384 |
| Bst1107I | GTATAC | 1 cut(s) | 2029 |
| Bst2BI | CACGAG | 2 cut(s) | 486, 664 |
| Bst2UI | CCWGG | 9 cut(s) | 1450, 1628, 1727, 2226, 2435, 2475, 2790, 3545, 3690 |
| Bst4CI | ACNGT | 7 cut(s) | 520, 1170, 1581, 2359, 2937, 3006, 3942 |
| Bst6I | CTCTTC | 8 cut(s) | 1530, 1798, 2723, 3058, 3132, 3150, 3468, 3474 |
| BstACI | GRCGYC | 3 cut(s) | 911, 1065, 1898 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 407, 497 |
| BstAUI | TGTACA | 1 cut(s) | 2802 |
| BstBAI | YACGTR | 1 cut(s) | 786 |
| BstC8I | GCNNGC | 8 cut(s) | 102, 577, 950, 1080, 2087, 2248, 2258, 3639 |
| BstDSI | CCRYGG | 6 cut(s) | 626, 2592, 2933, 3164, 3384, 4229 |
| BstEII | GGTNACC | 1 cut(s) | 1721 |
| BstF5I | GGATG | 6 cut(s) | 793, 2272, 2773, 3244, 3727, 4161 |
| BstFNI | CGCG | 2 cut(s) | 935, 4231 |
| BstH2I | RGCGCY | 1 cut(s) | 2933 |
| BstHHI | GCGC | 2 cut(s) | 1078, 2932 |
| BstMAI | GTCTC | 9 cut(s) | 206, 526, 852, 1072, 1139, 3228, 3389, 3678, 3743 |
| BstNI | CCWGG | 9 cut(s) | 1450, 1628, 1727, 2226, 2435, 2475, 2790, 3545, 3690 |
| BstNSI | RCATGY | 4 cut(s) | 362, 682, 2521, 3724 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1370 |
| BstPI | GGTNACC | 1 cut(s) | 1721 |
| BstSFI | CTRYAG | 3 cut(s) | 2313, 3204, 3771 |
| BstSLI | GKGCMC | 5 cut(s) | 559, 717, 1166, 1834, 4103 |
| BstUI | CGCG | 2 cut(s) | 935, 4231 |
| BstV2I | GAAGAC | 7 cut(s) | 708, 771, 870, 1935, 2697, 2889, 2983 |
| BstX2I | RGATCY | 9 cut(s) | 608, 659, 1850, 1864, 2702, 2717, 3596, 3993, 4042 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1039, 2441 |
| BstYI | RGATCY | 9 cut(s) | 608, 659, 1850, 1864, 2702, 2717, 3596, 3993, 4042 |
| BstZ17I | GTATAC | 1 cut(s) | 2029 |
| Bsu15I | ATCGAT | 3 cut(s) | 438, 1122, 2815 |
| BsuRI | GGCC | 6 cut(s) | 715, 872, 1250, 2591, 2633, 2793 |
| BsuTUI | ATCGAT | 3 cut(s) | 438, 1122, 2815 |
| BtgI | CCRYGG | 6 cut(s) | 626, 2592, 2933, 3164, 3384, 4229 |
| BtrI | CACGTC | 3 cut(s) | 616, 801, 2687 |
| BtsCI | GGATG | 6 cut(s) | 793, 2272, 2773, 3244, 3727, 4161 |
| BtsIMutI | CAGTG | 7 cut(s) | 90, 1012, 1114, 1843, 2364, 2908, 4101 |
| BveI | ACCTGC | 4 cut(s) | 145, 1465, 2320, 3097 |
| Cac8I | GCNNGC | 8 cut(s) | 102, 577, 950, 1080, 2087, 2248, 2258, 3639 |
| CaiI | CAGNNNCTG | 1 cut(s) | 3629 |
| CfoI | GCGC | 2 cut(s) | 1078, 2932 |
| Cfr10I | RCCGGY | 2 cut(s) | 1963, 3637 |
| Cfr42I | CCGCGG | 1 cut(s) | 4232 |
| Cfr9I | CCCGGG | 1 cut(s) | 873 |
| ClaI | ATCGAT | 3 cut(s) | 438, 1122, 2815 |
| CseI | GACGC | 2 cut(s) | 919, 1782 |
| CsiI | ACCWGGT | 1 cut(s) | 1626 |
| Csp6I | GTAC | 5 cut(s) | 272, 443, 2515, 2803, 3345 |
| CspAI | ACCGGT | 1 cut(s) | 1963 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3285, 3320 |
| CviQI | GTAC | 5 cut(s) | 272, 443, 2515, 2803, 3345 |
| DraI | TTTAAA | 3 cut(s) | 138, 3937, 4186 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 653 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1897 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 653 |
| EaeI | YGGCCR | 1 cut(s) | 1248 |
| Eam1104I | CTCTTC | 8 cut(s) | 1530, 1798, 2723, 3058, 3132, 3150, 3468, 3474 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1897 |
| EarI | CTCTTC | 8 cut(s) | 1530, 1798, 2723, 3058, 3132, 3150, 3468, 3474 |
| Ecl136II | GAGCTC | 3 cut(s) | 1045, 1155, 1940 |
| Eco130I | CCWWGG | 3 cut(s) | 626, 2592, 3384 |
| Eco24I | GRGCYC | 6 cut(s) | 717, 897, 1047, 1157, 1942, 3794 |
| Eco31I | GGTCTC | 2 cut(s) | 3678, 3743 |
| Eco47I | GGWCC | 8 cut(s) | 955, 1261, 1452, 2429, 2773, 2913, 3381, 3613 |
| Eco53kI | GAGCTC | 3 cut(s) | 1045, 1155, 1940 |
| Eco57I | CTGAAG | 7 cut(s) | 288, 1509, 1535, 1779, 3039, 3606, 4032 |
| Eco72I | CACGTG | 1 cut(s) | 786 |
| Eco88I | CYCGRG | 2 cut(s) | 873, 3181 |
| Eco91I | GGTNACC | 1 cut(s) | 1721 |
| EcoICRI | GAGCTC | 3 cut(s) | 1045, 1155, 1940 |
| EcoO109I | RGGNCCY | 4 cut(s) | 714, 1452, 2429, 2773 |
| EcoO65I | GGTNACC | 1 cut(s) | 1721 |
| EcoRI | GAATTC | 2 cut(s) | 3209, 3805 |
| EcoRII | CCWGG | 9 cut(s) | 1448, 1626, 1725, 2224, 2433, 2473, 2788, 3543, 3688 |
| EcoT14I | CCWWGG | 3 cut(s) | 626, 2592, 3384 |
| EcoT22I | ATGCAT | 1 cut(s) | 3726 |
| EcoT38I | GRGCYC | 6 cut(s) | 717, 897, 1047, 1157, 1942, 3794 |
| ErhI | CCWWGG | 3 cut(s) | 626, 2592, 3384 |
| Esp3I | CGTCTC | 3 cut(s) | 852, 1072, 1139 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 219, 251, 1300, 1332, 2589, 2621 |
| FaqI | GGGAC | 3 cut(s) | 787, 1240, 2415 |
| FauI | CCCGC | 3 cut(s) | 940, 1396, 3125 |
| FbaI | TGATCA | 3 cut(s) | 618, 1489, 1822 |
| FblI | GTMKAC | 3 cut(s) | 642, 908, 2028 |
| FokI | GGATG | 6 cut(s) | 780, 2279, 2780, 3251, 3714, 4148 |
| FriOI | GRGCYC | 6 cut(s) | 717, 897, 1047, 1157, 1942, 3794 |
| GlaI | GCGC | 2 cut(s) | 1077, 2931 |
| GsaI | CCCAGC | 3 cut(s) | 1840, 2921, 4169 |
| GsuI | CTGGAG | 4 cut(s) | 1867, 1881, 1956, 3375 |
| HaeII | RGCGCY | 1 cut(s) | 2933 |
| HaeIII | GGCC | 6 cut(s) | 715, 872, 1250, 2591, 2633, 2793 |
| HapII | CCGG | 5 cut(s) | 874, 1048, 1264, 1964, 3638 |
| HgaI | GACGC | 2 cut(s) | 919, 1782 |
| HhaI | GCGC | 2 cut(s) | 1078, 2932 |
| Hin1I | GRCGYC | 3 cut(s) | 911, 1065, 1898 |
| Hin6I | GCGC | 2 cut(s) | 1076, 2930 |
| HinP1I | GCGC | 2 cut(s) | 1076, 2930 |
| HincII | GTYRAC | 7 cut(s) | 356, 791, 909, 929, 1698, 1891, 3451 |
| HindII | GTYRAC | 7 cut(s) | 356, 791, 909, 929, 1698, 1891, 3451 |
| HindIII | AAGCTT | 5 cut(s) | 98, 573, 2195, 2213, 2873 |
| HpaII | CCGG | 5 cut(s) | 874, 1048, 1264, 1964, 3638 |
| HphI | GGTGA | 6 cut(s) | 36, 1343, 1426, 2069, 2456, 3998 |
| Hpy99I | CGWCG | 4 cut(s) | 617, 913, 1980, 2688 |
| HpyCH4III | ACNGT | 7 cut(s) | 520, 1170, 1581, 2359, 2937, 3006, 3942 |
| Hsp92I | GRCGYC | 3 cut(s) | 911, 1065, 1898 |
| HspAI | GCGC | 2 cut(s) | 1076, 2930 |
| Kpn2I | TCCGGA | 1 cut(s) | 1047 |
| KroI | GCCGGC | 1 cut(s) | 3637 |
| KroNI | GCCGGC | 1 cut(s) | 3639 |
| Ksp22I | TGATCA | 3 cut(s) | 618, 1489, 1822 |
| KspI | CCGCGG | 1 cut(s) | 4232 |
| LguI | GCTCTTC | 1 cut(s) | 3474 |
| MabI | ACCWGGT | 1 cut(s) | 1626 |
| MbiI | CCGCTC | 2 cut(s) | 1101, 3842 |
| MfeI | CAATTG | 2 cut(s) | 684, 3783 |
| MflI | RGATCY | 9 cut(s) | 608, 659, 1850, 1864, 2702, 2717, 3596, 3993, 4042 |
| MlyI | GAGTC | 9 cut(s) | 680, 914, 934, 1696, 1925, 3317, 3677, 3770, 4283 |
| MmeI | TCCRAC | 6 cut(s) | 294, 636, 1594, 1750, 2025, 2979 |
| Mph1103I | ATGCAT | 1 cut(s) | 3726 |
| MroI | TCCGGA | 1 cut(s) | 1047 |
| MroNI | GCCGGC | 1 cut(s) | 3637 |
| MroXI | GAANNNNTTC | 1 cut(s) | 334 |
| MslI | CAYNNNNRTG | 3 cut(s) | 363, 1922, 2360 |
| MspA1I | CMGCKG | 3 cut(s) | 2921, 3074, 4231 |
| MspI | CCGG | 5 cut(s) | 874, 1048, 1264, 1964, 3638 |
| MunI | CAATTG | 2 cut(s) | 684, 3783 |
| Mva1269I | GAATGC | 1 cut(s) | 2859 |
| MvaI | CCWGG | 9 cut(s) | 1450, 1628, 1727, 2226, 2435, 2475, 2790, 3545, 3690 |
| MvnI | CGCG | 2 cut(s) | 935, 4231 |
| NaeI | GCCGGC | 1 cut(s) | 3639 |
| NciI | CCSGG | 2 cut(s) | 874, 875 |
| NcoI | CCATGG | 3 cut(s) | 626, 2592, 3384 |
| NgoMIV | GCCGGC | 1 cut(s) | 3637 |
| NmeAIII | GCCGAG | 2 cut(s) | 1276, 1630 |
| NmuCI | GTSAC | 6 cut(s) | 127, 1109, 1995, 2057, 3909, 3986 |
| NsiI | ATGCAT | 1 cut(s) | 3726 |
| NspI | RCATGY | 4 cut(s) | 362, 682, 2521, 3724 |
| PaeR7I | CTCGAG | 1 cut(s) | 3181 |
| PciI | ACATGT | 1 cut(s) | 678 |
| PciSI | GCTCTTC | 1 cut(s) | 3474 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1280 |
| PctI | GAATGC | 1 cut(s) | 2859 |
| PdiI | GCCGGC | 1 cut(s) | 3639 |
| PdmI | GAANNNNTTC | 1 cut(s) | 334 |
| PflFI | GACNNNGTC | 1 cut(s) | 904 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 2757, 2910, 3708 |
| PinAI | ACCGGT | 1 cut(s) | 1963 |
| PleI | GAGTC | 9 cut(s) | 679, 913, 933, 1696, 1925, 3316, 3677, 3770, 4282 |
| PmaCI | CACGTG | 1 cut(s) | 786 |
| PmlI | CACGTG | 1 cut(s) | 786 |
| PpsI | GAGTC | 9 cut(s) | 679, 913, 933, 1696, 1925, 3316, 3677, 3770, 4282 |
| Ppu21I | YACGTR | 1 cut(s) | 786 |
| PpuMI | RGGWCCY | 3 cut(s) | 1452, 2429, 2773 |
| PscI | ACATGT | 1 cut(s) | 678 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1370 |
| PshBI | ATTAAT | 1 cut(s) | 2073 |
| Psp124BI | GAGCTC | 3 cut(s) | 1047, 1157, 1942 |
| Psp5II | RGGWCCY | 3 cut(s) | 1452, 2429, 2773 |
| Psp6I | CCWGG | 9 cut(s) | 1448, 1626, 1725, 2224, 2433, 2473, 2788, 3543, 3688 |
| PspCI | CACGTG | 1 cut(s) | 786 |
| PspEI | GGTNACC | 1 cut(s) | 1721 |
| PspFI | CCCAGC | 3 cut(s) | 1836, 2917, 4165 |
| PspGI | CCWGG | 9 cut(s) | 1448, 1626, 1725, 2224, 2433, 2473, 2788, 3543, 3688 |
| PspOMI | GGGCCC | 1 cut(s) | 713 |
| PspPPI | RGGWCCY | 3 cut(s) | 1452, 2429, 2773 |
| PspXI | VCTCGAGB | 1 cut(s) | 3181 |
| PstI | CTGCAG | 2 cut(s) | 2317, 3775 |
| PstNI | CAGNNNCTG | 1 cut(s) | 3629 |
| PsuI | RGATCY | 9 cut(s) | 608, 659, 1850, 1864, 2702, 2717, 3596, 3993, 4042 |
| PsyI | GACNNNGTC | 1 cut(s) | 904 |
| PvuII | CAGCTG | 2 cut(s) | 2921, 3074 |
| RsaI | GTAC | 5 cut(s) | 273, 444, 2516, 2804, 3346 |
| RsaNI | GTAC | 5 cut(s) | 272, 443, 2515, 2803, 3345 |
| RseI | CAYNNNNRTG | 3 cut(s) | 363, 1922, 2360 |
| SacI | GAGCTC | 3 cut(s) | 1047, 1157, 1942 |
| SacII | CCGCGG | 1 cut(s) | 4232 |
| SalI | GTCGAC | 1 cut(s) | 907 |
| SapI | GCTCTTC | 1 cut(s) | 3474 |
| ScaI | AGTACT | 1 cut(s) | 273 |
| SchI | GAGTC | 9 cut(s) | 680, 914, 934, 1696, 1925, 3317, 3677, 3770, 4283 |
| SexAI | ACCWGGT | 1 cut(s) | 1626 |
| SfcI | CTRYAG | 3 cut(s) | 2313, 3204, 3771 |
| Sfr274I | CTCGAG | 1 cut(s) | 3181 |
| Sfr303I | CCGCGG | 1 cut(s) | 4232 |
| SgrBI | CCGCGG | 1 cut(s) | 4232 |
| SinI | GGWCC | 8 cut(s) | 955, 1261, 1452, 2429, 2773, 2913, 3381, 3613 |
| SlaI | CTCGAG | 1 cut(s) | 3181 |
| SmaI | CCCGGG | 1 cut(s) | 875 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 363, 1922, 2360 |
| SmlI | CTYRAG | 4 cut(s) | 185, 2606, 3181, 3606 |
| SmoI | CTYRAG | 4 cut(s) | 185, 2606, 3181, 3606 |
| SstI | GAGCTC | 3 cut(s) | 1047, 1157, 1942 |
| StyI | CCWWGG | 3 cut(s) | 626, 2592, 3384 |
| TaaI | ACNGT | 7 cut(s) | 520, 1170, 1581, 2359, 2937, 3006, 3942 |
| TaqII | GACCGA | 1 cut(s) | 917 |
| TatI | WGTACW | 2 cut(s) | 271, 2802 |
| TauI | GCSGC | 4 cut(s) | 943, 1014, 2974, 3842 |
| TscAI | CASTG | 7 cut(s) | 97, 1012, 1114, 1850, 2364, 2915, 4108 |
| TseFI | GTSAC | 6 cut(s) | 127, 1109, 1995, 2057, 3909, 3986 |
| Tsp45I | GTSAC | 6 cut(s) | 127, 1109, 1995, 2057, 3909, 3986 |
| TspGWI | ACGGA | 2 cut(s) | 1163, 3580 |
| TspMI | CCCGGG | 1 cut(s) | 873 |
| TspRI | CASTG | 7 cut(s) | 97, 1012, 1114, 1850, 2364, 2915, 4108 |
| Tth111I | GACNNNGTC | 1 cut(s) | 904 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 2757, 2910, 3708 |
| VneI | GTGCAC | 1 cut(s) | 1162 |
| VpaK11BI | GGWCC | 8 cut(s) | 955, 1261, 1452, 2429, 2773, 2913, 3381, 3613 |
| VspI | ATTAAT | 1 cut(s) | 2073 |
| XapI | RAATTY | 9 cut(s) | 584, 1952, 2461, 2890, 2948, 3209, 3290, 3413, 3805 |
| XbaI | TCTAGA | 2 cut(s) | 1679, 2852 |
| XceI | RCATGY | 4 cut(s) | 362, 682, 2521, 3724 |
| XhoI | CTCGAG | 1 cut(s) | 3181 |
| XmaI | CCCGGG | 1 cut(s) | 873 |
| XmiI | GTMKAC | 3 cut(s) | 642, 908, 2028 |
| XmnI | GAANNNNTTC | 1 cut(s) | 334 |
| ZraI | GACGTC | 2 cut(s) | 1066, 1899 |
| ZrmI | AGTACT | 1 cut(s) | 273 |
| Zsp2I | ATGCAT | 1 cut(s) | 3726 |