BEST Arabidopsis thaliana protein match is COP1-interacting protein-related (TAIR AT1G72410.1)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G14172 AT3G14172 AT3G14172 |
| fragaria_vesca | FvH4_6g35280 FvH4_6g35280 FvH4_6g35280 |
| malus_domestica | MD09G1177000.v1.1 MD17G1149300.v1.1 |
| prunus_persica | Prupe.3G036100_v2.0.a1 Prupe.3G036100_v2.0.a1 Prupe.3G036100_v2.0.a1 |
| pyrus_communis | pycom09g09520 pycom17g14310 |
| rosa_chinensis | RchiOBHm_Chr2g0146661 |
| rosa_laevigata | RLG00000020212 |
| rosa_multiflora | Rmu_co8402929.1_g000001 Rmu_sc0001986.1_g000037 Rmu_sc0015720.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00099980 |
| rosa_rugosa | Rorug02G0395900 |
| rosa_samantha | Rh2AG452200 Rh2BG465100 Rh2CG439200 Rh2DG474100 |
| rosa_wichuraiana | Rw2G036940 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 3711 |
| Acc36I | ACCTGC | 5 cut(s) | 145, 895, 994, 1885, 2836 |
| Acc65I | GGTACC | 2 cut(s) | 2314, 3098 |
| AccB1I | GGYRCC | 5 cut(s) | 554, 1024, 2314, 2995, 3098 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2649, 3456 |
| AccBSI | CCGCTC | 2 cut(s) | 1056, 2144 |
| AccI | GTMKAC | 2 cut(s) | 2575, 3522 |
| AccII | CGCG | 2 cut(s) | 2572, 3661 |
| AclI | AACGTT | 1 cut(s) | 869 |
| AclWI | GGATC | 9 cut(s) | 474, 552, 1324, 2136, 2545, 2604, 3151, 3279, 3785 |
| AcoI | YGGCCR | 2 cut(s) | 2682, 3204 |
| AcsI | RAATTY | 6 cut(s) | 2353, 2393, 2951, 3044, 3170, 3553 |
| AcuI | CTGAAG | 3 cut(s) | 1428, 1698, 2366 |
| AcvI | CACGTG | 1 cut(s) | 747 |
| AcyI | GRCGYC | 1 cut(s) | 104 |
| AfaI | GTAC | 7 cut(s) | 262, 273, 580, 2187, 2316, 2704, 3100 |
| AfeI | AGCGCT | 1 cut(s) | 1203 |
| AflIII | ACRYGT | 2 cut(s) | 678, 746 |
| AgeI | ACCGGT | 1 cut(s) | 3101 |
| AjiI | CACGTC | 1 cut(s) | 2579 |
| AjnI | CCWGG | 8 cut(s) | 906, 946, 1249, 1545, 2122, 2325, 2648, 3436 |
| Alw21I | GWGCWC | 5 cut(s) | 487, 996, 1121, 2109, 3619 |
| Alw26I | GTCTC | 5 cut(s) | 526, 1487, 3143, 3426, 3491 |
| Alw44I | GTGCAC | 1 cut(s) | 1117 |
| AlwI | GGATC | 9 cut(s) | 474, 552, 1324, 2136, 2545, 2604, 3151, 3279, 3785 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 469, 1762, 3056 |
| Ama87I | CYCGRG | 2 cut(s) | 1281, 1666 |
| Aor51HI | AGCGCT | 1 cut(s) | 1203 |
| AoxI | GGCC | 9 cut(s) | 352, 660, 1243, 2469, 2481, 2682, 3031, 3183, 3204 |
| ApaLI | GTGCAC | 1 cut(s) | 1117 |
| ApeKI | GCWGC | 6 cut(s) | 401, 497, 1744, 2629, 2859, 3587 |
| ApoI | RAATTY | 6 cut(s) | 2353, 2393, 2951, 3044, 3170, 3553 |
| AsiGI | ACCGGT | 1 cut(s) | 3101 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 218, 334, 2851, 3888 |
| Asp718I | GGTACC | 2 cut(s) | 2314, 3098 |
| AspA2I | CCTAGG | 1 cut(s) | 1634 |
| AspLEI | GCGC | 3 cut(s) | 1204, 2572, 3663 |
| AsuC2I | CCSGG | 4 cut(s) | 659, 1282, 1283, 1646 |
| AsuHPI | GGTGA | 9 cut(s) | 36, 1115, 1267, 1310, 1336, 1970, 2348, 3906, 3934 |
| AvaI | CYCGRG | 2 cut(s) | 1281, 1666 |
| AvaII | GGWCC | 8 cut(s) | 655, 910, 1035, 1192, 1500, 1556, 2652, 3848 |
| AvrII | CCTAGG | 1 cut(s) | 1634 |
| BaeGI | GKGCMC | 2 cut(s) | 559, 1121 |
| BalI | TGGCCA | 1 cut(s) | 3206 |
| BanI | GGYRCC | 5 cut(s) | 554, 1024, 2314, 2995, 3098 |
| BanII | GRGCYC | 4 cut(s) | 996, 1112, 2450, 3542 |
| BauI | CACGAG | 1 cut(s) | 486 |
| BbrPI | CACGTG | 1 cut(s) | 747 |
| BbsI | GAAGAC | 6 cut(s) | 708, 732, 822, 1346, 1365, 2722 |
| Bbv12I | GWGCWC | 5 cut(s) | 487, 996, 1121, 2109, 3619 |
| BbvCI | CCTCAGC | 1 cut(s) | 3249 |
| BbvI | GCAGC | 6 cut(s) | 388, 484, 1756, 2641, 2871, 3599 |
| BceAI | ACGGC | 3 cut(s) | 411, 841, 2924 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1067, 1101 |
| BciT130I | CCWGG | 8 cut(s) | 908, 948, 1251, 1547, 2124, 2327, 2650, 3438 |
| BciVI | GTATCC | 1 cut(s) | 2572 |
| BclI | TGATCA | 2 cut(s) | 618, 1408 |
| BcnI | CCSGG | 4 cut(s) | 659, 1282, 1283, 1646 |
| BcoDI | GTCTC | 5 cut(s) | 526, 1487, 3143, 3426, 3491 |
| BfaI | CTAG | 9 cut(s) | 78, 275, 576, 1062, 1599, 1635, 2136, 2720, 3309 |
| BfmI | CTRYAG | 3 cut(s) | 402, 2946, 3519 |
| BfoI | RGCGCY | 1 cut(s) | 1205 |
| BfuAI | ACCTGC | 5 cut(s) | 145, 895, 994, 1885, 2836 |
| BfuI | GTATCC | 1 cut(s) | 2572 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3191 |
| BglII | AGATCT | 1 cut(s) | 3344 |
| BlnI | CCTAGG | 1 cut(s) | 1634 |
| BlpI | GCTNAGC | 2 cut(s) | 899, 2427 |
| Bme18I | GGWCC | 8 cut(s) | 655, 910, 1035, 1192, 1500, 1556, 2652, 3848 |
| BmeT110I | CYCGRG | 2 cut(s) | 1281, 1666 |
| BmgBI | CACGTC | 1 cut(s) | 2579 |
| BmrI | ACTGGG | 1 cut(s) | 720 |
| BmuI | ACTGGG | 1 cut(s) | 720 |
| BpiI | GAAGAC | 6 cut(s) | 708, 732, 822, 1346, 1365, 2722 |
| BpmI | CTGGAG | 3 cut(s) | 1797, 2817, 3129 |
| Bpu10I | CCTNAGC | 3 cut(s) | 995, 1740, 3249 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 899, 2427 |
| BpuEI | CTTGAG | 5 cut(s) | 206, 1445, 2057, 2944, 3339 |
| BpuMI | CCSGG | 4 cut(s) | 659, 1282, 1283, 1646 |
| Bsa29I | ATCGAT | 2 cut(s) | 687, 1077 |
| BsaAI | YACGTR | 1 cut(s) | 747 |
| BsaHI | GRCGYC | 1 cut(s) | 104 |
| BsaI | GGTCTC | 3 cut(s) | 3143, 3426, 3491 |
| BsaWI | WCCGGW | 3 cut(s) | 1194, 3101, 3919 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1385, 1415 |
| Bse118I | RCCGGY | 2 cut(s) | 1484, 3101 |
| BseBI | CCWGG | 8 cut(s) | 908, 948, 1251, 1547, 2124, 2327, 2650, 3438 |
| BseCI | ATCGAT | 2 cut(s) | 687, 1077 |
| BseGI | GGATG | 9 cut(s) | 385, 718, 740, 1124, 1630, 1930, 3259, 3475, 3589 |
| BseRI | GAGGAG | 6 cut(s) | 863, 1322, 1406, 1802, 1933, 3956 |
| BseSI | GKGCMC | 2 cut(s) | 559, 1121 |
| BseXI | GCAGC | 6 cut(s) | 388, 484, 1756, 2641, 2871, 3599 |
| BseYI | CCCAGC | 3 cut(s) | 638, 1286, 1755 |
| BsgI | GTGCAG | 4 cut(s) | 306, 2214, 2601, 2646 |
| Bsh1236I | CGCG | 2 cut(s) | 2572, 3661 |
| BshFI | GGCC | 9 cut(s) | 354, 662, 1245, 2471, 2483, 2684, 3033, 3185, 3206 |
| BshNI | GGYRCC | 5 cut(s) | 554, 1024, 2314, 2995, 3098 |
| BshTI | ACCGGT | 1 cut(s) | 3101 |
| BshVI | ATCGAT | 2 cut(s) | 687, 1077 |
| BsiHKAI | GWGCWC | 5 cut(s) | 487, 996, 1121, 2109, 3619 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1281, 1666 |
| BsiSI | CCGG | 7 cut(s) | 658, 1195, 1282, 1485, 1645, 3102, 3920 |
| BslFI | GGGAC | 7 cut(s) | 292, 656, 748, 1048, 1683, 3733, 3834 |
| BsmAI | GTCTC | 5 cut(s) | 526, 1487, 3143, 3426, 3491 |
| BsmFI | GGGAC | 7 cut(s) | 292, 656, 748, 1048, 1683, 3733, 3834 |
| BsmI | GAATGC | 1 cut(s) | 52 |
| BsnI | GGCC | 9 cut(s) | 354, 662, 1245, 2471, 2483, 2684, 3033, 3185, 3206 |
| Bso31I | GGTCTC | 3 cut(s) | 3143, 3426, 3491 |
| BsoBI | CYCGRG | 2 cut(s) | 1281, 1666 |
| Bsp1286I | GDGCHC | 9 cut(s) | 487, 559, 996, 1112, 1121, 2109, 2450, 3542, 3619 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 899, 2427 |
| Bsp19I | CCATGG | 2 cut(s) | 626, 2484 |
| BspANI | GGCC | 9 cut(s) | 354, 662, 1245, 2471, 2483, 2684, 3033, 3185, 3206 |
| BspDI | ATCGAT | 2 cut(s) | 687, 1077 |
| BspFNI | CGCG | 2 cut(s) | 2572, 3661 |
| BspMAI | CTGCAG | 1 cut(s) | 406 |
| BspMI | ACCTGC | 5 cut(s) | 145, 895, 994, 1885, 2836 |
| BspPI | GGATC | 9 cut(s) | 474, 552, 1324, 2136, 2545, 2604, 3151, 3279, 3785 |
| BspQI | GCTCTTC | 2 cut(s) | 144, 929 |
| BspT107I | GGYRCC | 5 cut(s) | 554, 1024, 2314, 2995, 3098 |
| BspTNI | GGTCTC | 3 cut(s) | 3143, 3426, 3491 |
| BsrBI | CCGCTC | 2 cut(s) | 1056, 2144 |
| BsrFI | RCCGGY | 2 cut(s) | 1484, 3101 |
| BssAI | RCCGGY | 2 cut(s) | 1484, 3101 |
| BssNI | GRCGYC | 1 cut(s) | 104 |
| BssSI | CACGAG | 1 cut(s) | 486 |
| BssT1I | CCWWGG | 6 cut(s) | 626, 1634, 1725, 2037, 2484, 3207 |
| Bst2BI | CACGAG | 1 cut(s) | 486 |
| Bst2UI | CCWGG | 8 cut(s) | 908, 948, 1251, 1547, 2124, 2327, 2650, 3438 |
| Bst4CI | ACNGT | 9 cut(s) | 520, 944, 1039, 1103, 1500, 1674, 2254, 3058, 3690 |
| Bst6I | CTCTTC | 7 cut(s) | 144, 929, 1717, 2454, 2797, 2871, 2892 |
| BstACI | GRCGYC | 1 cut(s) | 104 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 497, 1529 |
| BstBAI | YACGTR | 1 cut(s) | 747 |
| BstC8I | GCNNGC | 8 cut(s) | 102, 636, 772, 968, 1029, 2156, 2208, 2833 |
| BstDSI | CCRYGG | 2 cut(s) | 626, 2484 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3076 |
| BstF5I | GGATG | 9 cut(s) | 385, 718, 740, 1124, 1630, 1930, 3259, 3475, 3589 |
| BstFNI | CGCG | 2 cut(s) | 2572, 3661 |
| BstH2I | RGCGCY | 1 cut(s) | 1205 |
| BstHHI | GCGC | 3 cut(s) | 1204, 2572, 3663 |
| BstMAI | GTCTC | 5 cut(s) | 526, 1487, 3143, 3426, 3491 |
| BstNI | CCWGG | 8 cut(s) | 908, 948, 1251, 1547, 2124, 2327, 2650, 3438 |
| BstNSI | RCATGY | 3 cut(s) | 209, 682, 2413 |
| BstSFI | CTRYAG | 3 cut(s) | 402, 2946, 3519 |
| BstSLI | GKGCMC | 2 cut(s) | 559, 1121 |
| BstUI | CGCG | 2 cut(s) | 2572, 3661 |
| BstV1I | GCAGC | 6 cut(s) | 388, 484, 1756, 2641, 2871, 3599 |
| BstV2I | GAAGAC | 6 cut(s) | 708, 732, 822, 1346, 1365, 2722 |
| BstX2I | RGATCY | 5 cut(s) | 466, 3143, 3284, 3344, 3790 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 362, 2257, 2333 |
| BstYI | RGATCY | 5 cut(s) | 466, 3143, 3284, 3344, 3790 |
| Bsu15I | ATCGAT | 2 cut(s) | 687, 1077 |
| BsuI | GTATCC | 1 cut(s) | 2572 |
| BsuRI | GGCC | 9 cut(s) | 354, 662, 1245, 2471, 2483, 2684, 3033, 3185, 3206 |
| BsuTUI | ATCGAT | 2 cut(s) | 687, 1077 |
| BtgI | CCRYGG | 2 cut(s) | 626, 2484 |
| BtrI | CACGTC | 1 cut(s) | 2579 |
| BtsCI | GGATG | 9 cut(s) | 385, 718, 740, 1124, 1630, 1930, 3259, 3475, 3589 |
| BtsI | GCAGTG | 1 cut(s) | 462 |
| BtsIMutI | CAGTG | 4 cut(s) | 90, 462, 964, 2572 |
| BveI | ACCTGC | 5 cut(s) | 145, 895, 994, 1885, 2836 |
| Cac8I | GCNNGC | 8 cut(s) | 102, 636, 772, 968, 1029, 2156, 2208, 2833 |
| CaiI | CAGNNNCTG | 3 cut(s) | 469, 1762, 3056 |
| CfoI | GCGC | 3 cut(s) | 1204, 2572, 3663 |
| Cfr10I | RCCGGY | 2 cut(s) | 1484, 3101 |
| Cfr9I | CCCGGG | 1 cut(s) | 1281 |
| ClaI | ATCGAT | 2 cut(s) | 687, 1077 |
| CseI | GACGC | 4 cut(s) | 93, 892, 1351, 2561 |
| CsiI | ACCWGGT | 1 cut(s) | 1545 |
| Csp6I | GTAC | 7 cut(s) | 261, 272, 579, 2186, 2315, 2703, 3099 |
| CspAI | ACCGGT | 1 cut(s) | 3101 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3355, 3390 |
| CviQI | GTAC | 7 cut(s) | 261, 272, 579, 2186, 2315, 2703, 3099 |
| DraI | TTTAAA | 2 cut(s) | 3685, 3931 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3711 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3711 |
| EaeI | YGGCCR | 2 cut(s) | 2682, 3204 |
| Eam1104I | CTCTTC | 7 cut(s) | 144, 929, 1717, 2454, 2797, 2871, 2892 |
| EarI | CTCTTC | 7 cut(s) | 144, 929, 1717, 2454, 2797, 2871, 2892 |
| EciI | GGCGGA | 1 cut(s) | 2292 |
| Ecl136II | GAGCTC | 1 cut(s) | 994 |
| Eco130I | CCWWGG | 6 cut(s) | 626, 1634, 1725, 2037, 2484, 3207 |
| Eco147I | AGGCCT | 1 cut(s) | 3033 |
| Eco24I | GRGCYC | 4 cut(s) | 996, 1112, 2450, 3542 |
| Eco31I | GGTCTC | 3 cut(s) | 3143, 3426, 3491 |
| Eco47I | GGWCC | 8 cut(s) | 655, 910, 1035, 1192, 1500, 1556, 2652, 3848 |
| Eco47III | AGCGCT | 1 cut(s) | 1203 |
| Eco53kI | GAGCTC | 1 cut(s) | 994 |
| Eco57I | CTGAAG | 3 cut(s) | 1428, 1698, 2366 |
| Eco72I | CACGTG | 1 cut(s) | 747 |
| Eco88I | CYCGRG | 2 cut(s) | 1281, 1666 |
| EcoICRI | GAGCTC | 1 cut(s) | 994 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3076 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1556 |
| EcoRI | GAATTC | 2 cut(s) | 2951, 3553 |
| EcoRII | CCWGG | 8 cut(s) | 906, 946, 1249, 1545, 2122, 2325, 2648, 3436 |
| EcoT14I | CCWWGG | 6 cut(s) | 626, 1634, 1725, 2037, 2484, 3207 |
| EcoT38I | GRGCYC | 4 cut(s) | 996, 1112, 2450, 3542 |
| ErhI | CCWWGG | 6 cut(s) | 626, 1634, 1725, 2037, 2484, 3207 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 219, 251, 2481, 2513 |
| FaqI | GGGAC | 7 cut(s) | 292, 656, 748, 1048, 1683, 3733, 3834 |
| FauI | CCCGC | 2 cut(s) | 1024, 2864 |
| FbaI | TGATCA | 2 cut(s) | 618, 1408 |
| FblI | GTMKAC | 2 cut(s) | 2575, 3522 |
| FokI | GGATG | 9 cut(s) | 392, 705, 727, 1111, 1617, 1937, 3266, 3462, 3596 |
| FriOI | GRGCYC | 4 cut(s) | 996, 1112, 2450, 3542 |
| FspBI | CTAG | 9 cut(s) | 78, 275, 576, 1062, 1599, 1635, 2136, 2720, 3309 |
| GlaI | GCGC | 3 cut(s) | 1203, 2571, 3662 |
| GsaI | CCCAGC | 3 cut(s) | 642, 1290, 1759 |
| GsuI | CTGGAG | 3 cut(s) | 1797, 2817, 3129 |
| HaeII | RGCGCY | 1 cut(s) | 1205 |
| HaeIII | GGCC | 9 cut(s) | 354, 662, 1245, 2471, 2483, 2684, 3033, 3185, 3206 |
| HapII | CCGG | 7 cut(s) | 658, 1195, 1282, 1485, 1645, 3102, 3920 |
| HgaI | GACGC | 4 cut(s) | 93, 892, 1351, 2561 |
| HhaI | GCGC | 3 cut(s) | 1204, 2572, 3663 |
| Hin1I | GRCGYC | 1 cut(s) | 104 |
| Hin6I | GCGC | 3 cut(s) | 1202, 2570, 3661 |
| HinP1I | GCGC | 3 cut(s) | 1202, 2570, 3661 |
| HincII | GTYRAC | 4 cut(s) | 752, 881, 2001, 2576 |
| HindII | GTYRAC | 4 cut(s) | 752, 881, 2001, 2576 |
| HindIII | AAGCTT | 1 cut(s) | 2093 |
| HpaII | CCGG | 7 cut(s) | 658, 1195, 1282, 1485, 1645, 3102, 3920 |
| HphI | GGTGA | 9 cut(s) | 36, 1115, 1267, 1310, 1336, 1970, 2348, 3906, 3934 |
| Hpy99I | CGWCG | 2 cut(s) | 2577, 2580 |
| HpyAV | CCTTC | 9 cut(s) | 133, 369, 835, 888, 2305, 2458, 3076, 3408, 3921 |
| HpyCH4III | ACNGT | 9 cut(s) | 520, 944, 1039, 1103, 1500, 1674, 2254, 3058, 3690 |
| HpyCH4IV | ACGT | 6 cut(s) | 199, 746, 804, 869, 2188, 2578 |
| HpySE526I | ACGT | 6 cut(s) | 199, 746, 804, 869, 2188, 2578 |
| Hsp92I | GRCGYC | 1 cut(s) | 104 |
| HspAI | GCGC | 3 cut(s) | 1202, 2570, 3661 |
| KpnI | GGTACC | 2 cut(s) | 2318, 3102 |
| Ksp22I | TGATCA | 2 cut(s) | 618, 1408 |
| LguI | GCTCTTC | 2 cut(s) | 144, 929 |
| LmnI | GCTCC | 9 cut(s) | 850, 991, 1053, 1752, 2230, 2626, 3537, 3943, 3976 |
| Lsp1109I | GCAGC | 6 cut(s) | 388, 484, 1756, 2641, 2871, 3599 |
| MabI | ACCWGGT | 1 cut(s) | 1545 |
| MaeI | CTAG | 9 cut(s) | 78, 275, 576, 1062, 1599, 1635, 2136, 2720, 3309 |
| MaeII | ACGT | 6 cut(s) | 199, 746, 804, 869, 2188, 2578 |
| MbiI | CCGCTC | 2 cut(s) | 1056, 2144 |
| MfeI | CAATTG | 1 cut(s) | 311 |
| MflI | RGATCY | 5 cut(s) | 466, 3143, 3284, 3344, 3790 |
| MhlI | GDGCHC | 9 cut(s) | 487, 559, 996, 1112, 1121, 2109, 2450, 3542, 3619 |
| MlsI | TGGCCA | 1 cut(s) | 3206 |
| MluNI | TGGCCA | 1 cut(s) | 3206 |
| MlyI | GAGTC | 7 cut(s) | 680, 1615, 2648, 3071, 3425, 3518, 4013 |
| MmeI | TCCRAC | 2 cut(s) | 1926, 2718 |
| Mox20I | TGGCCA | 1 cut(s) | 3206 |
| MroXI | GAANNNNTTC | 4 cut(s) | 218, 334, 2851, 3888 |
| MscI | TGGCCA | 1 cut(s) | 3206 |
| MslI | CAYNNNNRTG | 2 cut(s) | 745, 2255 |
| Msp20I | TGGCCA | 1 cut(s) | 3206 |
| MspA1I | CMGCKG | 2 cut(s) | 638, 3248 |
| MspI | CCGG | 7 cut(s) | 658, 1195, 1282, 1485, 1645, 3102, 3920 |
| MunI | CAATTG | 1 cut(s) | 311 |
| Mva1269I | GAATGC | 1 cut(s) | 52 |
| MvaI | CCWGG | 8 cut(s) | 908, 948, 1251, 1547, 2124, 2327, 2650, 3438 |
| MvnI | CGCG | 2 cut(s) | 2572, 3661 |
| NciI | CCSGG | 4 cut(s) | 659, 1282, 1283, 1646 |
| NcoI | CCATGG | 2 cut(s) | 626, 2484 |
| NmuCI | GTSAC | 4 cut(s) | 42, 1064, 1908, 2904 |
| NspI | RCATGY | 3 cut(s) | 209, 682, 2413 |
| PceI | AGGCCT | 1 cut(s) | 3033 |
| PciI | ACATGT | 1 cut(s) | 678 |
| PciSI | GCTCTTC | 2 cut(s) | 144, 929 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1220, 3712 |
| PctI | GAATGC | 1 cut(s) | 52 |
| PdmI | GAANNNNTTC | 4 cut(s) | 218, 334, 2851, 3888 |
| PflFI | GACNNNGTC | 1 cut(s) | 1498 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2649, 3456 |
| PfoI | TCCNGGA | 1 cut(s) | 906 |
| PinAI | ACCGGT | 1 cut(s) | 3101 |
| PleI | GAGTC | 7 cut(s) | 679, 1615, 2647, 3070, 3425, 3518, 4013 |
| PmaCI | CACGTG | 1 cut(s) | 747 |
| PmlI | CACGTG | 1 cut(s) | 747 |
| PpsI | GAGTC | 7 cut(s) | 679, 1615, 2647, 3070, 3425, 3518, 4013 |
| Ppu21I | YACGTR | 1 cut(s) | 747 |
| PpuMI | RGGWCCY | 1 cut(s) | 1556 |
| PscI | ACATGT | 1 cut(s) | 678 |
| Psp124BI | GAGCTC | 1 cut(s) | 996 |
| Psp1406I | AACGTT | 1 cut(s) | 869 |
| Psp5II | RGGWCCY | 1 cut(s) | 1556 |
| Psp6I | CCWGG | 8 cut(s) | 906, 946, 1249, 1545, 2122, 2325, 2648, 3436 |
| PspCI | CACGTG | 1 cut(s) | 747 |
| PspFI | CCCAGC | 3 cut(s) | 638, 1286, 1755 |
| PspGI | CCWGG | 8 cut(s) | 906, 946, 1249, 1545, 2122, 2325, 2648, 3436 |
| PspPPI | RGGWCCY | 1 cut(s) | 1556 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2001, 2033 |
| PstI | CTGCAG | 1 cut(s) | 406 |
| PstNI | CAGNNNCTG | 3 cut(s) | 469, 1762, 3056 |
| PsuI | RGATCY | 5 cut(s) | 466, 3143, 3284, 3344, 3790 |
| PsyI | GACNNNGTC | 1 cut(s) | 1498 |
| PvuII | CAGCTG | 2 cut(s) | 638, 3248 |
| RsaI | GTAC | 7 cut(s) | 262, 273, 580, 2187, 2316, 2704, 3100 |
| RsaNI | GTAC | 7 cut(s) | 261, 272, 579, 2186, 2315, 2703, 3099 |
| RseI | CAYNNNNRTG | 2 cut(s) | 745, 2255 |
| SacI | GAGCTC | 1 cut(s) | 996 |
| SalI | GTCGAC | 1 cut(s) | 2574 |
| SapI | GCTCTTC | 2 cut(s) | 144, 929 |
| SchI | GAGTC | 7 cut(s) | 680, 1615, 2648, 3071, 3425, 3518, 4013 |
| SduI | GDGCHC | 9 cut(s) | 487, 559, 996, 1112, 1121, 2109, 2450, 3542, 3619 |
| SexAI | ACCWGGT | 1 cut(s) | 1545 |
| SfcI | CTRYAG | 3 cut(s) | 402, 2946, 3519 |
| SgrDI | CGTCGACG | 1 cut(s) | 2574 |
| SinI | GGWCC | 8 cut(s) | 655, 910, 1035, 1192, 1500, 1556, 2652, 3848 |
| SmaI | CCCGGG | 1 cut(s) | 1283 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 745, 2255 |
| SmlI | CTYRAG | 5 cut(s) | 185, 1424, 2072, 2923, 3354 |
| SmoI | CTYRAG | 5 cut(s) | 185, 1424, 2072, 2923, 3354 |
| SseBI | AGGCCT | 1 cut(s) | 3033 |
| SspMI | CTAG | 9 cut(s) | 78, 275, 576, 1062, 1599, 1635, 2136, 2720, 3309 |
| SstI | GAGCTC | 1 cut(s) | 996 |
| StuI | AGGCCT | 1 cut(s) | 3033 |
| StyI | CCWWGG | 6 cut(s) | 626, 1634, 1725, 2037, 2484, 3207 |
| TaaI | ACNGT | 9 cut(s) | 520, 944, 1039, 1103, 1500, 1674, 2254, 3058, 3690 |
| TaiI | ACGT | 6 cut(s) | 202, 749, 807, 872, 2191, 2581 |
| TaqII | GACCGA | 1 cut(s) | 875 |
| TatI | WGTACW | 3 cut(s) | 260, 578, 2702 |
| TauI | GCSGC | 5 cut(s) | 401, 448, 1003, 2713, 3661 |
| TscAI | CASTG | 4 cut(s) | 97, 462, 964, 2572 |
| TseFI | GTSAC | 4 cut(s) | 42, 1064, 1908, 2904 |
| TseI | GCWGC | 6 cut(s) | 401, 497, 1744, 2629, 2859, 3587 |
| Tsp45I | GTSAC | 4 cut(s) | 42, 1064, 1908, 2904 |
| TspGWI | ACGGA | 2 cut(s) | 340, 3468 |
| TspMI | CCCGGG | 1 cut(s) | 1281 |
| TspRI | CASTG | 4 cut(s) | 97, 462, 964, 2572 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1498 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2649, 3456 |
| VneI | GTGCAC | 1 cut(s) | 1117 |
| VpaK11BI | GGWCC | 8 cut(s) | 655, 910, 1035, 1192, 1500, 1556, 2652, 3848 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3076 |
| XapI | RAATTY | 6 cut(s) | 2353, 2393, 2951, 3044, 3170, 3553 |
| XbaI | TCTAGA | 1 cut(s) | 1598 |
| XceI | RCATGY | 3 cut(s) | 209, 682, 2413 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2254 |
| XmaI | CCCGGG | 1 cut(s) | 1281 |
| XmaJI | CCTAGG | 1 cut(s) | 1634 |
| XmiI | GTMKAC | 2 cut(s) | 2575, 3522 |
| XmnI | GAANNNNTTC | 4 cut(s) | 218, 334, 2851, 3888 |
| XspI | CTAG | 9 cut(s) | 78, 275, 576, 1062, 1599, 1635, 2136, 2720, 3309 |