BEST Arabidopsis thaliana protein match is COP1-interacting protein-related (TAIR AT1G72410.1)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G14172 AT3G14172 AT3G14172 |
| fragaria_vesca | FvH4_6g35280 FvH4_6g35280 FvH4_6g35280 |
| malus_domestica | MD09G1177000.v1.1 MD17G1149300.v1.1 |
| prunus_persica | Prupe.3G036100_v2.0.a1 Prupe.3G036100_v2.0.a1 Prupe.3G036100_v2.0.a1 |
| pyrus_communis | pycom09g09520 pycom17g14310 |
| rosa_chinensis | RchiOBHm_Chr2g0146661 |
| rosa_laevigata | RLG00000020212 |
| rosa_multiflora | Rmu_co8402929.1_g000001 Rmu_sc0001986.1_g000037 Rmu_sc0015720.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00099980 |
| rosa_rugosa | Rorug02G0395900 |
| rosa_samantha | Rh2AG452200 Rh2BG465100 Rh2CG439200 Rh2DG474100 |
| rosa_wichuraiana | Rw2G036940 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1453 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 653 |
| Acc36I | ACCTGC | 4 cut(s) | 145, 1453, 2116, 3103 |
| Acc65I | GGTACC | 1 cut(s) | 389 |
| AccB1I | GGYRCC | 4 cut(s) | 389, 554, 1151, 4171 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2916, 3711 |
| AccBSI | CCGCTC | 2 cut(s) | 1179, 1510 |
| AccI | GTMKAC | 1 cut(s) | 3777 |
| AccII | CGCG | 1 cut(s) | 2694 |
| AcoI | YGGCCR | 2 cut(s) | 3153, 3453 |
| AcsI | RAATTY | 9 cut(s) | 584, 1793, 2050, 2345, 2401, 2467, 2507, 2789, 2896 |
| AcuI | CTGAAG | 4 cut(s) | 720, 1794, 3609, 4035 |
| AcvI | CACGTG | 1 cut(s) | 774 |
| AdeI | CACNNNGTG | 1 cut(s) | 62 |
| AfaI | GTAC | 5 cut(s) | 391, 444, 1273, 2522, 2810 |
| AflIII | ACRYGT | 3 cut(s) | 678, 773, 1098 |
| AgeI | ACCGGT | 1 cut(s) | 1975 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1102 |
| AjiI | CACGTC | 3 cut(s) | 616, 1054, 1099 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2368, 2400 |
| Alw21I | GWGCWC | 9 cut(s) | 487, 1035, 1214, 1954, 2166, 2178, 2220, 2686, 3874 |
| Alw26I | GTCTC | 7 cut(s) | 206, 1583, 1860, 2841, 3140, 3401, 3681 |
| Alw44I | GTGCAC | 1 cut(s) | 1210 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 1408, 1586, 1858, 2480, 3632 |
| Ama87I | CYCGRG | 1 cut(s) | 923 |
| AoxI | GGCC | 8 cut(s) | 713, 858, 1128, 2595, 2797, 3153, 3453, 3753 |
| ApaI | GGGCCC | 1 cut(s) | 717 |
| ApaLI | GTGCAC | 1 cut(s) | 1210 |
| ApeKI | GCWGC | 6 cut(s) | 497, 579, 2321, 2743, 3126, 3842 |
| ApoI | RAATTY | 9 cut(s) | 584, 1793, 2050, 2345, 2401, 2467, 2507, 2789, 2896 |
| AscI | GGCGCGCC | 1 cut(s) | 2692 |
| AseI | ATTAAT | 1 cut(s) | 3138 |
| AsiGI | ACCGGT | 1 cut(s) | 1975 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 3392 |
| Asp718I | GGTACC | 1 cut(s) | 389 |
| AspA2I | CCTAGG | 1 cut(s) | 1730 |
| AspLEI | GCGC | 2 cut(s) | 2694, 2696 |
| AspS9I | GGNCC | 5 cut(s) | 713, 714, 1300, 3616, 4103 |
| AsuC2I | CCSGG | 3 cut(s) | 924, 925, 4169 |
| AsuHPI | GGTGA | 8 cut(s) | 36, 1276, 1382, 1847, 2078, 2402, 2462, 3681 |
| AvaI | CYCGRG | 1 cut(s) | 923 |
| AvaII | GGWCC | 3 cut(s) | 1300, 3616, 4103 |
| AvrII | CCTAGG | 1 cut(s) | 1730 |
| AxyI | CCTNAGG | 1 cut(s) | 267 |
| BaeGI | GKGCMC | 4 cut(s) | 559, 717, 1214, 3654 |
| BalI | TGGCCA | 1 cut(s) | 3155 |
| BamHI | GGATCC | 1 cut(s) | 3289 |
| BanI | GGYRCC | 4 cut(s) | 389, 554, 1151, 4171 |
| BanII | GRGCYC | 6 cut(s) | 717, 1035, 1954, 2166, 2178, 3797 |
| BauI | CACGAG | 1 cut(s) | 486 |
| BbrPI | CACGTG | 1 cut(s) | 774 |
| BbsI | GAAGAC | 3 cut(s) | 708, 2432, 2989 |
| Bbv12I | GWGCWC | 9 cut(s) | 487, 1035, 1214, 1954, 2166, 2178, 2220, 2686, 3874 |
| BbvCI | CCTCAGC | 2 cut(s) | 1395, 4289 |
| BbvI | GCAGC | 6 cut(s) | 484, 591, 2333, 2755, 3138, 3854 |
| BceAI | ACGGC | 2 cut(s) | 1115, 3468 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 156, 190, 2207, 2241 |
| BciVI | GTATCC | 2 cut(s) | 2447, 3916 |
| BclI | TGATCA | 2 cut(s) | 1525, 1837 |
| BcnI | CCSGG | 3 cut(s) | 924, 925, 4169 |
| BcoDI | GTCTC | 7 cut(s) | 206, 1583, 1860, 2841, 3140, 3401, 3681 |
| BfaI | CTAG | 8 cut(s) | 749, 1494, 1695, 1731, 2247, 2679, 2859, 3005 |
| BfmI | CTRYAG | 3 cut(s) | 2340, 3210, 3774 |
| BfuAI | ACCTGC | 4 cut(s) | 145, 1453, 2116, 3103 |
| BfuI | GTATCC | 2 cut(s) | 2447, 3916 |
| BglII | AGATCT | 2 cut(s) | 1865, 3599 |
| BisI | GCNGC | 9 cut(s) | 321, 498, 580, 932, 2322, 2744, 3127, 3645, 3843 |
| BlnI | CCTAGG | 1 cut(s) | 1730 |
| BlpI | GCTNAGC | 1 cut(s) | 935 |
| BlsI | GCNGC | 9 cut(s) | 322, 499, 581, 933, 2323, 2745, 3128, 3646, 3844 |
| Bme18I | GGWCC | 3 cut(s) | 1300, 3616, 4103 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1102 |
| BmeT110I | CYCGRG | 1 cut(s) | 923 |
| BmgBI | CACGTC | 3 cut(s) | 616, 1054, 1099 |
| BmgT120I | GGNCC | 5 cut(s) | 713, 714, 1300, 3616, 4103 |
| BmrI | ACTGGG | 1 cut(s) | 304 |
| BmuI | ACTGGG | 1 cut(s) | 304 |
| BpiI | GAAGAC | 3 cut(s) | 708, 2432, 2989 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2768, 2800 |
| BpmI | CTGGAG | 4 cut(s) | 1896, 1968, 3084, 3387 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1395, 4289 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 935 |
| BpuEI | CTTGAG | 4 cut(s) | 206, 2633, 3208, 3594 |
| BpuMI | CCSGG | 3 cut(s) | 924, 925, 4169 |
| Bsa29I | ATCGAT | 1 cut(s) | 1170 |
| BsaAI | YACGTR | 1 cut(s) | 774 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2778 |
| BsaI | GGTCTC | 1 cut(s) | 3681 |
| BsaWI | WCCGGW | 1 cut(s) | 1975 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 605, 635, 1342, 1372, 3311, 3341 |
| Bse118I | RCCGGY | 2 cut(s) | 1009, 1975 |
| Bse1I | ACTGG | 8 cut(s) | 285, 310, 1155, 1321, 1413, 1986, 2117, 3910 |
| Bse21I | CCTNAGG | 1 cut(s) | 267 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2778 |
| BseCI | ATCGAT | 1 cut(s) | 1170 |
| BseGI | GGATG | 9 cut(s) | 351, 385, 649, 883, 2281, 2779, 3730, 3855, 3882 |
| BseJI | GATNNNNATC | 1 cut(s) | 2778 |
| BseNI | ACTGG | 8 cut(s) | 285, 310, 1155, 1321, 1413, 1986, 2117, 3910 |
| BsePI | GCGCGC | 1 cut(s) | 2692 |
| BseRI | GAGGAG | 5 cut(s) | 6, 1081, 1448, 1901, 2342 |
| BseSI | GKGCMC | 4 cut(s) | 559, 717, 1214, 3654 |
| BseXI | GCAGC | 6 cut(s) | 484, 591, 2333, 2755, 3138, 3854 |
| BsgI | GTGCAG | 1 cut(s) | 795 |
| Bsh1236I | CGCG | 1 cut(s) | 2694 |
| BshFI | GGCC | 8 cut(s) | 715, 860, 1130, 2597, 2799, 3155, 3455, 3755 |
| BshNI | GGYRCC | 4 cut(s) | 389, 554, 1151, 4171 |
| BshTI | ACCGGT | 1 cut(s) | 1975 |
| BshVI | ATCGAT | 1 cut(s) | 1170 |
| BsiHKAI | GWGCWC | 9 cut(s) | 487, 1035, 1214, 1954, 2166, 2178, 2220, 2686, 3874 |
| BsiHKCI | CYCGRG | 1 cut(s) | 923 |
| BsiSI | CCGG | 5 cut(s) | 924, 987, 1010, 1976, 4169 |
| BslFI | GGGAC | 4 cut(s) | 292, 775, 1413, 3988 |
| BsmAI | GTCTC | 7 cut(s) | 206, 1583, 1860, 2841, 3140, 3401, 3681 |
| BsmBI | CGTCTC | 1 cut(s) | 2841 |
| BsmFI | GGGAC | 4 cut(s) | 292, 775, 1413, 3988 |
| BsmI | GAATGC | 1 cut(s) | 2865 |
| BsnI | GGCC | 8 cut(s) | 715, 860, 1130, 2597, 2799, 3155, 3455, 3755 |
| Bso31I | GGTCTC | 1 cut(s) | 3681 |
| BsoBI | CYCGRG | 1 cut(s) | 923 |
| Bsp120I | GGGCCC | 1 cut(s) | 713 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 935 |
| Bsp19I | CCATGG | 3 cut(s) | 626, 2271, 2598 |
| BspANI | GGCC | 8 cut(s) | 715, 860, 1130, 2597, 2799, 3155, 3455, 3755 |
| BspDI | ATCGAT | 1 cut(s) | 1170 |
| BspFNI | CGCG | 1 cut(s) | 2694 |
| BspHI | TCATGA | 1 cut(s) | 3748 |
| BspMAI | CTGCAG | 1 cut(s) | 2344 |
| BspMI | ACCTGC | 4 cut(s) | 145, 1453, 2116, 3103 |
| BspQI | GCTCTTC | 4 cut(s) | 144, 747, 3267, 3471 |
| BspT107I | GGYRCC | 4 cut(s) | 389, 554, 1151, 4171 |
| BspTNI | GGTCTC | 1 cut(s) | 3681 |
| BsrBI | CCGCTC | 2 cut(s) | 1179, 1510 |
| BsrFI | RCCGGY | 2 cut(s) | 1009, 1975 |
| BsrI | ACTGG | 8 cut(s) | 285, 310, 1155, 1321, 1413, 1986, 2117, 3910 |
| BssAI | RCCGGY | 2 cut(s) | 1009, 1975 |
| BssHII | GCGCGC | 1 cut(s) | 2692 |
| BssSI | CACGAG | 1 cut(s) | 486 |
| BssT1I | CCWWGG | 8 cut(s) | 626, 861, 1730, 2148, 2271, 2598, 3156, 3456 |
| Bst2BI | CACGAG | 1 cut(s) | 486 |
| Bst6I | CTCTTC | 9 cut(s) | 144, 747, 2568, 3064, 3138, 3156, 3267, 3465, 3471 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 497 |
| BstBAI | YACGTR | 1 cut(s) | 774 |
| BstC8I | GCNNGC | 5 cut(s) | 102, 577, 1113, 2694, 3642 |
| BstDSI | CCRYGG | 5 cut(s) | 626, 2271, 2598, 2939, 4235 |
| BstEII | GGTNACC | 1 cut(s) | 1736 |
| BstF5I | GGATG | 9 cut(s) | 351, 385, 649, 883, 2281, 2779, 3730, 3855, 3882 |
| BstFNI | CGCG | 1 cut(s) | 2694 |
| BstHHI | GCGC | 2 cut(s) | 2694, 2696 |
| BstMAI | GTCTC | 7 cut(s) | 206, 1583, 1860, 2841, 3140, 3401, 3681 |
| BstNSI | RCATGY | 3 cut(s) | 682, 2527, 3727 |
| BstPI | GGTNACC | 1 cut(s) | 1736 |
| BstSFI | CTRYAG | 3 cut(s) | 2340, 3210, 3774 |
| BstSLI | GKGCMC | 4 cut(s) | 559, 717, 1214, 3654 |
| BstUI | CGCG | 1 cut(s) | 2694 |
| BstV1I | GCAGC | 6 cut(s) | 484, 591, 2333, 2755, 3138, 3854 |
| BstV2I | GAAGAC | 3 cut(s) | 708, 2432, 2989 |
| BstX2I | RGATCY | 9 cut(s) | 608, 659, 1075, 1865, 2779, 3289, 3599, 3996, 4045 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 400 |
| BstYI | RGATCY | 9 cut(s) | 608, 659, 1075, 1865, 2779, 3289, 3599, 3996, 4045 |
| Bsu15I | ATCGAT | 1 cut(s) | 1170 |
| Bsu36I | CCTNAGG | 1 cut(s) | 267 |
| BsuI | GTATCC | 2 cut(s) | 2447, 3916 |
| BsuRI | GGCC | 8 cut(s) | 715, 860, 1130, 2597, 2799, 3155, 3455, 3755 |
| BsuTUI | ATCGAT | 1 cut(s) | 1170 |
| BtgI | CCRYGG | 5 cut(s) | 626, 2271, 2598, 2939, 4235 |
| BtgZI | GCGATG | 1 cut(s) | 545 |
| BtrI | CACGTC | 3 cut(s) | 616, 1054, 1099 |
| BtsCI | GGATG | 9 cut(s) | 351, 385, 649, 883, 2281, 2779, 3730, 3855, 3882 |
| BtsI | GCAGTG | 2 cut(s) | 405, 1003 |
| BtsIMutI | CAGTG | 8 cut(s) | 90, 405, 696, 1003, 1162, 1406, 2370, 3633 |
| BveI | ACCTGC | 4 cut(s) | 145, 1453, 2116, 3103 |
| Cac8I | GCNNGC | 5 cut(s) | 102, 577, 1113, 2694, 3642 |
| CaiI | CAGNNNCTG | 5 cut(s) | 1408, 1586, 1858, 2480, 3632 |
| CciI | TCATGA | 1 cut(s) | 3748 |
| CfoI | GCGC | 2 cut(s) | 2694, 2696 |
| Cfr10I | RCCGGY | 2 cut(s) | 1009, 1975 |
| Cfr13I | GGNCC | 5 cut(s) | 713, 714, 1300, 3616, 4103 |
| Cfr9I | CCCGGG | 1 cut(s) | 923 |
| ClaI | ATCGAT | 1 cut(s) | 1170 |
| CseI | GACGC | 2 cut(s) | 93, 928 |
| CsiI | ACCWGGT | 1 cut(s) | 1641 |
| Csp6I | GTAC | 5 cut(s) | 390, 443, 1272, 2521, 2809 |
| CspAI | ACCGGT | 1 cut(s) | 1975 |
| CviQI | GTAC | 5 cut(s) | 390, 443, 1272, 2521, 2809 |
| DraI | TTTAAA | 3 cut(s) | 138, 3940, 4189 |
| DraIII | CACNNNGTG | 1 cut(s) | 62 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 653 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1102 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 653 |
| EaeI | YGGCCR | 2 cut(s) | 3153, 3453 |
| Eam1104I | CTCTTC | 9 cut(s) | 144, 747, 2568, 3064, 3138, 3156, 3267, 3465, 3471 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1102 |
| EarI | CTCTTC | 9 cut(s) | 144, 747, 2568, 3064, 3138, 3156, 3267, 3465, 3471 |
| EciI | GGCGGA | 1 cut(s) | 2642 |
| Ecl136II | GAGCTC | 4 cut(s) | 1033, 1952, 2164, 2176 |
| Eco130I | CCWWGG | 8 cut(s) | 626, 861, 1730, 2148, 2271, 2598, 3156, 3456 |
| Eco147I | AGGCCT | 1 cut(s) | 3755 |
| Eco24I | GRGCYC | 6 cut(s) | 717, 1035, 1954, 2166, 2178, 3797 |
| Eco31I | GGTCTC | 1 cut(s) | 3681 |
| Eco47I | GGWCC | 3 cut(s) | 1300, 3616, 4103 |
| Eco53kI | GAGCTC | 4 cut(s) | 1033, 1952, 2164, 2176 |
| Eco57I | CTGAAG | 4 cut(s) | 720, 1794, 3609, 4035 |
| Eco72I | CACGTG | 1 cut(s) | 774 |
| Eco81I | CCTNAGG | 1 cut(s) | 267 |
| Eco88I | CYCGRG | 1 cut(s) | 923 |
| Eco91I | GGTNACC | 1 cut(s) | 1736 |
| EcoICRI | GAGCTC | 4 cut(s) | 1033, 1952, 2164, 2176 |
| EcoO109I | RGGNCCY | 1 cut(s) | 4103 |
| EcoO65I | GGTNACC | 1 cut(s) | 1736 |
| EcoT14I | CCWWGG | 8 cut(s) | 626, 861, 1730, 2148, 2271, 2598, 3156, 3456 |
| EcoT22I | ATGCAT | 1 cut(s) | 3729 |
| EcoT38I | GRGCYC | 6 cut(s) | 717, 1035, 1954, 2166, 2178, 3797 |
| ErhI | CCWWGG | 8 cut(s) | 626, 861, 1730, 2148, 2271, 2598, 3156, 3456 |
| Esp3I | CGTCTC | 1 cut(s) | 2841 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 219, 251, 1339, 1371, 2595, 2627 |
| FaqI | GGGAC | 4 cut(s) | 292, 775, 1413, 3988 |
| FauI | CCCGC | 5 cut(s) | 1172, 1503, 2425, 3131, 3350 |
| FbaI | TGATCA | 2 cut(s) | 1525, 1837 |
| FblI | GTMKAC | 1 cut(s) | 3777 |
| Fnu4HI | GCNGC | 9 cut(s) | 321, 498, 580, 932, 2322, 2744, 3127, 3645, 3843 |
| FokI | GGATG | 9 cut(s) | 358, 392, 656, 890, 2288, 2786, 3717, 3862, 3869 |
| FriOI | GRGCYC | 6 cut(s) | 717, 1035, 1954, 2166, 2178, 3797 |
| Fsp4HI | GCNGC | 9 cut(s) | 321, 498, 580, 932, 2322, 2744, 3127, 3645, 3843 |
| FspBI | CTAG | 8 cut(s) | 749, 1494, 1695, 1731, 2247, 2679, 2859, 3005 |
| GlaI | GCGC | 2 cut(s) | 2693, 2695 |
| GluI | GCNGC | 9 cut(s) | 321, 498, 580, 932, 2322, 2744, 3127, 3645, 3843 |
| GsuI | CTGGAG | 4 cut(s) | 1896, 1968, 3084, 3387 |
| HaeIII | GGCC | 8 cut(s) | 715, 860, 1130, 2597, 2799, 3155, 3455, 3755 |
| HapII | CCGG | 5 cut(s) | 924, 987, 1010, 1976, 4169 |
| HgaI | GACGC | 2 cut(s) | 93, 928 |
| HhaI | GCGC | 2 cut(s) | 2694, 2696 |
| Hin6I | GCGC | 2 cut(s) | 2692, 2694 |
| HinP1I | GCGC | 2 cut(s) | 2692, 2694 |
| HincII | GTYRAC | 8 cut(s) | 193, 356, 779, 897, 920, 1314, 1903, 3448 |
| HindII | GTYRAC | 8 cut(s) | 193, 356, 779, 897, 920, 1314, 1903, 3448 |
| HindIII | AAGCTT | 6 cut(s) | 98, 573, 1803, 2204, 2222, 2879 |
| HpaII | CCGG | 5 cut(s) | 924, 987, 1010, 1976, 4169 |
| HphI | GGTGA | 8 cut(s) | 36, 1276, 1382, 1847, 2078, 2402, 2462, 3681 |
| Hpy99I | CGWCG | 1 cut(s) | 617 |
| HpyCH4IV | ACGT | 8 cut(s) | 199, 615, 773, 820, 828, 1053, 1098, 1726 |
| HpySE526I | ACGT | 8 cut(s) | 199, 615, 773, 820, 828, 1053, 1098, 1726 |
| HspAI | GCGC | 2 cut(s) | 2692, 2694 |
| KpnI | GGTACC | 1 cut(s) | 393 |
| Ksp22I | TGATCA | 2 cut(s) | 1525, 1837 |
| LguI | GCTCTTC | 4 cut(s) | 144, 747, 3267, 3471 |
| Lsp1109I | GCAGC | 6 cut(s) | 484, 591, 2333, 2755, 3138, 3854 |
| MabI | ACCWGGT | 1 cut(s) | 1641 |
| MaeI | CTAG | 8 cut(s) | 749, 1494, 1695, 1731, 2247, 2679, 2859, 3005 |
| MaeII | ACGT | 8 cut(s) | 199, 615, 773, 820, 828, 1053, 1098, 1726 |
| MbiI | CCGCTC | 2 cut(s) | 1179, 1510 |
| MfeI | CAATTG | 2 cut(s) | 38, 2925 |
| MflI | RGATCY | 9 cut(s) | 608, 659, 1075, 1865, 2779, 3289, 3599, 3996, 4045 |
| MlsI | TGGCCA | 1 cut(s) | 3155 |
| MluNI | TGGCCA | 1 cut(s) | 3155 |
| MmeI | TCCRAC | 7 cut(s) | 294, 636, 1595, 1609, 1765, 2349, 2985 |
| Mox20I | TGGCCA | 1 cut(s) | 3155 |
| Mph1103I | ATGCAT | 1 cut(s) | 3729 |
| MroXI | GAANNNNTTC | 1 cut(s) | 3392 |
| MscI | TGGCCA | 1 cut(s) | 3155 |
| MslI | CAYNNNNRTG | 2 cut(s) | 363, 1934 |
| Msp20I | TGGCCA | 1 cut(s) | 3155 |
| MspA1I | CMGCKG | 2 cut(s) | 2432, 3080 |
| MspI | CCGG | 5 cut(s) | 924, 987, 1010, 1976, 4169 |
| MunI | CAATTG | 2 cut(s) | 38, 2925 |
| Mva1269I | GAATGC | 1 cut(s) | 2865 |
| MvnI | CGCG | 1 cut(s) | 2694 |
| NciI | CCSGG | 3 cut(s) | 924, 925, 4169 |
| NcoI | CCATGG | 3 cut(s) | 626, 2271, 2598 |
| NmuCI | GTSAC | 6 cut(s) | 42, 127, 1264, 1285, 2066, 3912 |
| NsiI | ATGCAT | 1 cut(s) | 3729 |
| NspI | RCATGY | 3 cut(s) | 682, 2527, 3727 |
| PagI | TCATGA | 1 cut(s) | 3748 |
| PalAI | GGCGCGCC | 1 cut(s) | 2692 |
| PaqCI | CACCTGC | 1 cut(s) | 1453 |
| PauI | GCGCGC | 1 cut(s) | 2692 |
| PceI | AGGCCT | 1 cut(s) | 3755 |
| PciI | ACATGT | 1 cut(s) | 678 |
| PciSI | GCTCTTC | 4 cut(s) | 144, 747, 3267, 3471 |
| PctI | GAATGC | 1 cut(s) | 2865 |
| PdmI | GAANNNNTTC | 1 cut(s) | 3392 |
| PflFI | GACNNNGTC | 3 cut(s) | 892, 1258, 1594 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2916, 3711 |
| PfoI | TCCNGGA | 2 cut(s) | 942, 1484 |
| PinAI | ACCGGT | 1 cut(s) | 1975 |
| PkrI | GCNGC | 9 cut(s) | 322, 499, 581, 933, 2323, 2745, 3128, 3646, 3844 |
| PmaCI | CACGTG | 1 cut(s) | 774 |
| PmlI | CACGTG | 1 cut(s) | 774 |
| Ppu21I | YACGTR | 1 cut(s) | 774 |
| PpuMI | RGGWCCY | 1 cut(s) | 4103 |
| PscI | ACATGT | 1 cut(s) | 678 |
| PshBI | ATTAAT | 1 cut(s) | 3138 |
| Psp124BI | GAGCTC | 4 cut(s) | 1035, 1954, 2166, 2178 |
| Psp5II | RGGWCCY | 1 cut(s) | 4103 |
| PspCI | CACGTG | 1 cut(s) | 774 |
| PspEI | GGTNACC | 1 cut(s) | 1736 |
| PspOMI | GGGCCC | 1 cut(s) | 713 |
| PspPI | GGNCC | 5 cut(s) | 713, 714, 1300, 3616, 4103 |
| PspPPI | RGGWCCY | 1 cut(s) | 4103 |
| PstI | CTGCAG | 1 cut(s) | 2344 |
| PstNI | CAGNNNCTG | 5 cut(s) | 1408, 1586, 1858, 2480, 3632 |
| PsuI | RGATCY | 9 cut(s) | 608, 659, 1075, 1865, 2779, 3289, 3599, 3996, 4045 |
| PsyI | GACNNNGTC | 3 cut(s) | 892, 1258, 1594 |
| PteI | GCGCGC | 1 cut(s) | 2692 |
| PvuII | CAGCTG | 1 cut(s) | 3080 |
| RsaI | GTAC | 5 cut(s) | 391, 444, 1273, 2522, 2810 |
| RsaNI | GTAC | 5 cut(s) | 390, 443, 1272, 2521, 2809 |
| RseI | CAYNNNNRTG | 2 cut(s) | 363, 1934 |
| SacI | GAGCTC | 4 cut(s) | 1035, 1954, 2166, 2178 |
| SapI | GCTCTTC | 4 cut(s) | 144, 747, 3267, 3471 |
| SatI | GCNGC | 9 cut(s) | 321, 498, 580, 932, 2322, 2744, 3127, 3645, 3843 |
| Sau96I | GGNCC | 5 cut(s) | 713, 714, 1300, 3616, 4103 |
| SexAI | ACCWGGT | 1 cut(s) | 1641 |
| SfcI | CTRYAG | 3 cut(s) | 2340, 3210, 3774 |
| SgsI | GGCGCGCC | 1 cut(s) | 2692 |
| SinI | GGWCC | 3 cut(s) | 1300, 3616, 4103 |
| SmaI | CCCGGG | 1 cut(s) | 925 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 363, 1934 |
| SmlI | CTYRAG | 4 cut(s) | 185, 2612, 3187, 3609 |
| SmoI | CTYRAG | 4 cut(s) | 185, 2612, 3187, 3609 |
| SseBI | AGGCCT | 1 cut(s) | 3755 |
| SspMI | CTAG | 8 cut(s) | 749, 1494, 1695, 1731, 2247, 2679, 2859, 3005 |
| SstI | GAGCTC | 4 cut(s) | 1035, 1954, 2166, 2178 |
| StuI | AGGCCT | 1 cut(s) | 3755 |
| StyI | CCWWGG | 8 cut(s) | 626, 861, 1730, 2148, 2271, 2598, 3156, 3456 |
| TaiI | ACGT | 8 cut(s) | 202, 618, 776, 823, 831, 1056, 1101, 1729 |
| TaqI | TCGA | 9 cut(s) | 176, 1170, 1322, 1990, 2121, 2257, 2722, 3323, 3588 |
| TaqII | GACCGA | 3 cut(s) | 1304, 1714, 3571 |
| TatI | WGTACW | 1 cut(s) | 1271 |
| TauI | GCSGC | 3 cut(s) | 323, 934, 3647 |
| TscAI | CASTG | 8 cut(s) | 97, 405, 703, 1003, 1162, 1413, 2370, 3633 |
| TseFI | GTSAC | 6 cut(s) | 42, 127, 1264, 1285, 2066, 3912 |
| TseI | GCWGC | 6 cut(s) | 497, 579, 2321, 2743, 3126, 3842 |
| Tsp45I | GTSAC | 6 cut(s) | 42, 127, 1264, 1285, 2066, 3912 |
| TspGWI | ACGGA | 4 cut(s) | 340, 1520, 2826, 3931 |
| TspMI | CCCGGG | 1 cut(s) | 923 |
| TspRI | CASTG | 8 cut(s) | 97, 405, 703, 1003, 1162, 1413, 2370, 3633 |
| Tth111I | GACNNNGTC | 3 cut(s) | 892, 1258, 1594 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2916, 3711 |
| VneI | GTGCAC | 1 cut(s) | 1210 |
| VpaK11BI | GGWCC | 3 cut(s) | 1300, 3616, 4103 |
| VspI | ATTAAT | 1 cut(s) | 3138 |
| XapI | RAATTY | 9 cut(s) | 584, 1793, 2050, 2345, 2401, 2467, 2507, 2789, 2896 |
| XbaI | TCTAGA | 2 cut(s) | 1694, 2858 |
| XceI | RCATGY | 3 cut(s) | 682, 2527, 3727 |
| XmaI | CCCGGG | 1 cut(s) | 923 |
| XmaJI | CCTAGG | 1 cut(s) | 1730 |
| XmiI | GTMKAC | 1 cut(s) | 3777 |
| XmnI | GAANNNNTTC | 1 cut(s) | 3392 |
| XspI | CTAG | 8 cut(s) | 749, 1494, 1695, 1731, 2247, 2679, 2859, 3005 |
| Zsp2I | ATGCAT | 1 cut(s) | 3729 |