AT3G14410

sugar phosphate phosphate translocator

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0004974
Physical Location & Seq
Reverse (-)
4815763 .. 4817981
2219 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G14410.1

Sequence Viewer

Length: 1023 bp
ATGGCGGATCGGAGCAAAGGCTTTATGAGAGCTGAATTCGTGACCTATGCTTACATTCTTCTCTATATCGCTCTTTCTAGTGGTCAAATCTTCTTCAATAAGTGGGTTTTGTCATCTAAGGAAATTAATTTCCCTTATCCTCTTGGATTGACTTTACTCCATATGATCTTTTCCTCTGTCTTGTGCTTTCTTCTTACCAAAGTTCTTAAGATTGTGAAGGTCGAGGAAGGAATGACACTAGAAATATATGTTACGTCAGTTATTCCAATAGGTGCAATGTTTGCAATGACCCTCTGGTTGGGAAACACTGCCTACCTCTACATATCAGTTGCATTTGCGCAGATGTTGAAGGCTATAATGCCTGTTGCTGTGTTTATTCTTGGAGTAGCTGCTGGACTTGAAATGATGAGCTGCAGGATGCTTTTGATAATGTCTATCATAAGTTTTGGTGTTTTAGTAGCTTCTTATGGGGAATTAAACATCAACTGGATTGGAGTGGTTTACCAAATGGGTGGTGTTGTTGGAGAAGCCCTGAGGCTAATCTTCATGGAACTTCTTGTCAAGAGGAAGGGCATCAAGTTAAACCCAATCTCTCTTATGTACTACGTGAGCCCATGCAGTGCTATCTGCTTGTTTGTGCCGTGGATCTTTCTAGAGAAATCGAAGATAGATGGCAATGGCCCATGGAACTTCCACTTTGTAGTGTTGACCCTTAATTCCCTCTGTACATTTGCCCTCAACTTGTCGGTTTTCTTGGTGATTTCTCACACGAGTGCTCTCACTATCCGAGTTGCTGGCGTTGTCAAGGATTGGGTGGTTGTCTTGGTGTCAGCTCTTCTCTTTGCCGACACGAAACTCACAATCATCAATCTTTTCGGTTACGCCATCGCTATTGCCGGTGTAGCGGCTTATAACAACCATAAGCTGAAGAAGGAAGCATCCAAAGTTGTTACCACAGAAACTCCAGGAGATGCTGAATCAATACCGTTGGTGTCACAAGGTAATACTAATACAGAGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0022626 GO:0032991 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044424 GO:0044444 GO:0044445 GO:0044464 GO:1990904
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPT

Protein Analysis

340

Amino Acids

37.51

Weight (kDa)

8.96

Isoelectric Point (pI)

23.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPT PF03151 18 - 305 2.4e-25 Triose-phosphate Transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 912
Acc16I TGCGCA 1 cut(s) 339
AciI CCGC 2 cut(s) 5, 905
AclWI GGATC 2 cut(s) 15, 653
AcsI RAATTY 1 cut(s) 35
AcuI CTGAAG 1 cut(s) 947
AfaI GTAC 2 cut(s) 602, 727
AfiI CCNNNNNNNGG 1 cut(s) 298
AflII CTTAAG 1 cut(s) 206
AgsI TTSAA 3 cut(s) 97, 349, 401
AjnI CCWGG 1 cut(s) 964
AleI CACNNNNGTG 1 cut(s) 771
AluBI AGCT 6 cut(s) 32, 389, 411, 461, 833, 925
AluI AGCT 6 cut(s) 32, 389, 411, 461, 833, 925
Alw21I GWGCWC 1 cut(s) 778
AlwI GGATC 2 cut(s) 15, 653
AoxI GGCC 1 cut(s) 679
ApeKI GCWGC 2 cut(s) 389, 411
ApoI RAATTY 1 cut(s) 35
AseI ATTAAT 1 cut(s) 126
AspLEI GCGC 1 cut(s) 340
AspS9I GGNCC 1 cut(s) 680
AsuHPI GGTGA 1 cut(s) 769
AxyI CCTNAGG 1 cut(s) 533
BanII GRGCYC 1 cut(s) 614
BauI CACGAG 1 cut(s) 769
Bbv12I GWGCWC 1 cut(s) 778
BbvI GCAGC 2 cut(s) 376, 398
BccI CCATC 2 cut(s) 665, 893
BceAI ACGGC 1 cut(s) 625
BciT130I CCWGG 1 cut(s) 966
BfaI CTAG 3 cut(s) 78, 239, 653
BfmI CTRYAG 1 cut(s) 412
BfrI CTTAAG 1 cut(s) 206
BisI GCNGC 3 cut(s) 390, 412, 906
BlsI GCNGC 3 cut(s) 391, 413, 907
Bme1390I CCNGG 1 cut(s) 966
BmgT120I GGNCC 1 cut(s) 680
BmrFI CCNGG 1 cut(s) 966
BmsI GCATC 4 cut(s) 408, 582, 947, 961
BpmI CTGGAG 1 cut(s) 948
BsaAI YACGTR 1 cut(s) 607
BsaJI CCNNGG 2 cut(s) 641, 683
BsaXI ACNNNNNCTCC 2 cut(s) 946, 976
Bsc4I CCNNNNNNNGG 1 cut(s) 298
Bse118I RCCGGY 1 cut(s) 896
Bse1I ACTGG 1 cut(s) 491
Bse21I CCTNAGG 1 cut(s) 533
Bse3DI GCAATG 3 cut(s) 282, 291, 682
BseBI CCWGG 1 cut(s) 966
BseDI CCNNGG 2 cut(s) 641, 683
BseGI GGATG 2 cut(s) 423, 938
BseLI CCNNNNNNNGG 1 cut(s) 298
BseMI GCAATG 3 cut(s) 282, 291, 682
BseMII CTCAG 1 cut(s) 524
BseNI ACTGG 1 cut(s) 491
BseXI GCAGC 2 cut(s) 376, 398
BshFI GGCC 1 cut(s) 681
BsiHKAI GWGCWC 1 cut(s) 778
BsiSI CCGG 1 cut(s) 897
BslI CCNNNNNNNGG 1 cut(s) 298
BsnI GGCC 1 cut(s) 681
Bsp1286I GDGCHC 2 cut(s) 614, 778
Bsp1407I TGTACA 1 cut(s) 725
Bsp143I GATC 3 cut(s) 7, 165, 645
Bsp19I CCATGG 1 cut(s) 683
BspACI CCGC 2 cut(s) 5, 905
BspANI GGCC 1 cut(s) 681
BspCNI CTCAG 1 cut(s) 525
BspMAI CTGCAG 1 cut(s) 416
BspPI GGATC 2 cut(s) 15, 653
BspQI GCTCTTC 1 cut(s) 840
BspTI CTTAAG 1 cut(s) 206
BsrDI GCAATG 3 cut(s) 282, 291, 682
BsrFI RCCGGY 1 cut(s) 896
BsrGI TGTACA 1 cut(s) 725
BsrI ACTGG 1 cut(s) 491
BssAI RCCGGY 1 cut(s) 896
BssECI CCNNGG 2 cut(s) 641, 683
BssMI GATC 3 cut(s) 7, 165, 645
BssSI CACGAG 1 cut(s) 769
BssT1I CCWWGG 1 cut(s) 683
Bst2BI CACGAG 1 cut(s) 769
Bst2UI CCWGG 1 cut(s) 966
Bst4CI ACNGT 1 cut(s) 987
Bst6I CTCTTC 1 cut(s) 840
BstAFI CTTAAG 1 cut(s) 206
BstAPI GCANNNNNTGC 1 cut(s) 281
BstAUI TGTACA 1 cut(s) 725
BstBAI YACGTR 1 cut(s) 607
BstC8I GCNNGC 1 cut(s) 796
BstDEI CTNAG 2 cut(s) 117, 533
BstDSI CCRYGG 2 cut(s) 641, 683
BstF5I GGATG 2 cut(s) 423, 938
BstHHI GCGC 1 cut(s) 340
BstKTI GATC 3 cut(s) 10, 168, 648
BstMBI GATC 3 cut(s) 7, 165, 645
BstMWI GCNNNNNNNGC 2 cut(s) 281, 902
BstNI CCWGG 1 cut(s) 966
BstSCI CCNGG 1 cut(s) 964
BstSFI CTRYAG 1 cut(s) 412
BstV1I GCAGC 2 cut(s) 376, 398
BstX2I RGATCY 1 cut(s) 645
BstXI CCANNNNNNTGG 1 cut(s) 512
BstYI RGATCY 1 cut(s) 645
Bsu36I CCTNAGG 1 cut(s) 533
BsuRI GGCC 1 cut(s) 681
BtgI CCRYGG 2 cut(s) 641, 683
BtgZI GCGATG 1 cut(s) 871
BtsCI GGATG 2 cut(s) 423, 938
BtsI GCAGTG 2 cut(s) 306, 625
BtsIMutI CAGTG 2 cut(s) 306, 625
Cac8I GCNNGC 1 cut(s) 796
CfoI GCGC 1 cut(s) 340
Cfr10I RCCGGY 1 cut(s) 896
Cfr13I GGNCC 1 cut(s) 680
Csp6I GTAC 2 cut(s) 601, 726
CviAII CATG 3 cut(s) 547, 615, 684
CviQI GTAC 2 cut(s) 601, 726
DdeI CTNAG 2 cut(s) 117, 533
DpnI GATC 3 cut(s) 9, 167, 647
DpnII GATC 3 cut(s) 7, 165, 645
Eam1104I CTCTTC 1 cut(s) 840
EarI CTCTTC 1 cut(s) 840
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 1 cut(s) 683
Eco24I GRGCYC 1 cut(s) 614
Eco57I CTGAAG 1 cut(s) 947
Eco81I CCTNAGG 1 cut(s) 533
EcoRI GAATTC 1 cut(s) 35
EcoRII CCWGG 1 cut(s) 964
EcoT14I CCWWGG 1 cut(s) 683
EcoT38I GRGCYC 1 cut(s) 614
ErhI CCWWGG 1 cut(s) 683
FaeI CATG 3 cut(s) 550, 618, 687
FatI CATG 3 cut(s) 546, 614, 683
FauNDI CATATG 1 cut(s) 162
Fnu4HI GCNGC 3 cut(s) 390, 412, 906
FokI GGATG 2 cut(s) 430, 925
FriOI GRGCYC 1 cut(s) 614
Fsp4HI GCNGC 3 cut(s) 390, 412, 906
FspBI CTAG 3 cut(s) 78, 239, 653
FspI TGCGCA 1 cut(s) 339
GlaI GCGC 1 cut(s) 339
GluI GCNGC 3 cut(s) 390, 412, 906
GsuI CTGGAG 1 cut(s) 948
HaeIII GGCC 1 cut(s) 681
HapII CCGG 1 cut(s) 897
HhaI GCGC 1 cut(s) 340
Hin1II CATG 3 cut(s) 550, 618, 687
Hin6I GCGC 1 cut(s) 338
HinP1I GCGC 1 cut(s) 338
HincII GTYRAC 1 cut(s) 708
HindII GTYRAC 1 cut(s) 708
HinfI GANTC 1 cut(s) 977
HpaII CCGG 1 cut(s) 897
HphI GGTGA 1 cut(s) 769
Hpy166II GTNNAC 2 cut(s) 502, 708
Hpy188I TCNGA 2 cut(s) 12, 788
Hpy188III TCNNGA 3 cut(s) 40, 562, 653
Hpy8I GTNNAC 2 cut(s) 502, 708
HpyAV CCTTC 5 cut(s) 211, 221, 343, 562, 925
HpyCH4III ACNGT 1 cut(s) 987
HpyCH4IV ACGT 2 cut(s) 254, 606
HpyCH4V TGCA 5 cut(s) 275, 284, 332, 414, 618
HpyF10VI GCNNNNNNNGC 2 cut(s) 281, 902
HpyF3I CTNAG 2 cut(s) 117, 533
HpySE526I ACGT 2 cut(s) 254, 606
Hsp92II CATG 3 cut(s) 550, 618, 687
HspAI GCGC 1 cut(s) 338
Kzo9I GATC 3 cut(s) 7, 165, 645
LguI GCTCTTC 1 cut(s) 840
LmnI GCTCC 1 cut(s) 12
Lsp1109I GCAGC 2 cut(s) 376, 398
LweI GCATC 4 cut(s) 408, 582, 947, 961
MaeI CTAG 3 cut(s) 78, 239, 653
MaeII ACGT 2 cut(s) 254, 606
MaeIII GTNAC 5 cut(s) 40, 250, 878, 949, 993
MalI GATC 3 cut(s) 9, 167, 647
MboI GATC 3 cut(s) 7, 165, 645
MboII GAAGA 8 cut(s) 50, 82, 85, 182, 535, 676, 827, 940
MflI RGATCY 1 cut(s) 645
MhlI GDGCHC 2 cut(s) 614, 778
MluCI AATT 5 cut(s) 35, 123, 127, 473, 715
MmeI TCCRAC 1 cut(s) 502
MnlI CCTC 9 cut(s) 150, 184, 217, 302, 326, 528, 558, 731, 746
MseI TTAA 5 cut(s) 126, 207, 476, 581, 714
MslI CAYNNNNRTG 1 cut(s) 771
MspCI CTTAAG 1 cut(s) 206
MspI CCGG 1 cut(s) 897
MspR9I CCNGG 1 cut(s) 966
MvaI CCWGG 1 cut(s) 966
MwoI GCNNNNNNNGC 2 cut(s) 281, 902
NcoI CCATGG 1 cut(s) 683
NdeI CATATG 1 cut(s) 162
NdeII GATC 3 cut(s) 7, 165, 645
NlaIII CATG 3 cut(s) 550, 618, 687
NmuCI GTSAC 2 cut(s) 40, 993
NsbI TGCGCA 1 cut(s) 339
OliI CACNNNNGTG 1 cut(s) 771
PciSI GCTCTTC 1 cut(s) 840
PfeI GAWTC 1 cut(s) 977
PfoI TCCNGGA 1 cut(s) 964
PkrI GCNGC 3 cut(s) 391, 413, 907
Ppu21I YACGTR 1 cut(s) 607
PshBI ATTAAT 1 cut(s) 126
PsiI TTATAA 1 cut(s) 912
Psp6I CCWGG 1 cut(s) 964
PspGI CCWGG 1 cut(s) 964
PspPI GGNCC 1 cut(s) 680
PstI CTGCAG 1 cut(s) 416
PsuI RGATCY 1 cut(s) 645
RsaI GTAC 2 cut(s) 602, 727
RsaNI GTAC 2 cut(s) 601, 726
RseI CAYNNNNRTG 1 cut(s) 771
SapI GCTCTTC 1 cut(s) 840
SaqAI TTAA 5 cut(s) 126, 207, 476, 581, 714
SatI GCNGC 3 cut(s) 390, 412, 906
Sau3AI GATC 3 cut(s) 7, 165, 645
Sau96I GGNCC 1 cut(s) 680
ScrFI CCNGG 1 cut(s) 966
SduI GDGCHC 2 cut(s) 614, 778
SfaNI GCATC 4 cut(s) 408, 582, 947, 961
SfcI CTRYAG 1 cut(s) 412
SmiMI CAYNNNNRTG 1 cut(s) 771
SmlI CTYRAG 1 cut(s) 206
SmoI CTYRAG 1 cut(s) 206
Sse9I AATT 5 cut(s) 35, 123, 127, 473, 715
SsiI CCGC 2 cut(s) 5, 905
SspMI CTAG 3 cut(s) 78, 239, 653
StyD4I CCNGG 1 cut(s) 964
StyI CCWWGG 1 cut(s) 683
TaaI ACNGT 1 cut(s) 987
TaiI ACGT 2 cut(s) 257, 609
TaqI TCGA 2 cut(s) 222, 662
TasI AATT 5 cut(s) 35, 123, 127, 473, 715
TatI WGTACW 2 cut(s) 600, 725
TauI GCSGC 1 cut(s) 908
TfiI GAWTC 1 cut(s) 977
Tru1I TTAA 5 cut(s) 126, 207, 476, 581, 714
Tru9I TTAA 5 cut(s) 126, 207, 476, 581, 714
TscAI CASTG 2 cut(s) 313, 625
TseFI GTSAC 2 cut(s) 40, 993
TseI GCWGC 2 cut(s) 389, 411
Tsp45I GTSAC 2 cut(s) 40, 993
TspDTI ATGAA 1 cut(s) 535
TspRI CASTG 2 cut(s) 313, 625
Vha464I CTTAAG 1 cut(s) 206
VspI ATTAAT 1 cut(s) 126
XapI RAATTY 1 cut(s) 35
XbaI TCTAGA 1 cut(s) 652
XspI CTAG 3 cut(s) 78, 239, 653
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.