Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0012154

Physical Location & Seq

Genomic Coordinates Reverse (-)

5767977 .. 5770488

Gene Structure 2512 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G16890.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1980 bp

ATGAGAGGCTTTGCTTCTTCAGCATCTAGAATAGCGACGGCGGCAGCAGCTTCCAAATCACTAAACGCTTCCACATCCGTAAACCCTAAGCTCTCAAAAACCCTAAACTCTTCAGGTAAACCCACCAATCCTCTGAACCAGCGTTACATTTCGCAAGTCATAGAGAGAAAAGATTGGTTTTTGATACTGAATCAAGAATTCACCACTCATCGAATTGGTCTCAACACTCGATTCGTCATCAGCGTTTTGCAGAATCAAGACAACCCATTACACTCCCTGCGATTTTACCTCTGGGTCTCCAACTTCGACCCGGTTTACGCTAAGGATCAGTCTCTGAAGAGTGTTCTAGGGAACGCACTTTTTCGTAAAGGCCCCTTATTGTTGTCTATGGAATTGCTTAAAGAGATTAGAGATTCAGGGTATCGGATTAGTGATGAATTGATGTGTGTTTTGATCGGAAGCTGGGGAAGATTAGGTTTAGCTAAGTACTGTAATGATGTTTTTGCTCAGATATCTTTTCTTGGAATGAAACCAAGTACAAGGCTTTATAATGCTGTGATTGATGCGTTGGTGAAGTCTAATTCACTTGATTTGGCTTACCTCAAGTTTCAGCAGATGCGTAGTGATGGCTGTAAACCGGATCGGTTTACCTATAATATACTTATACATGGTGTTTGCAAGAAGGGTGTGGTTGATGAAGCTATTCGATTGGTTAAACAGATGGAACAGGAAGGGAATAGACCCAATGTGTTCACATACACGATTTTGATCGACGGGTTTTTGATAGCAGGGAGGGTTGATGAGGCGTTGAAGCAATTGGAGATGATGCGGGTGAGAAAGTTGAATCCTAATGAAGCTACAATCAGAACTTTCGTACACGGGATTTTCCGTTGCTTGCCGCCGTGTAAAGCGTTTGAGGTTTTGGTTGGGTTTATGGAGAAAGACTCAAACTTGCAAAGAGTTGGTTACGATGCTGTGTTGTATTGTCTTTCAAACAACTCAATGGCTAAAGAGACTGGTCAATTCTTGAGGAAGATAGGTGAGAGAGGTTATATTCCGGATAGCTCAACATTCAATGCTGCGATGAGTTGTCTCCTAAAAGGGCATGATCTTGTTGAGACTTGTAGGATATTTGACGGTTTTGTCAGCCGTGGAGTTAAGCCAGGATTCAATGGTTATCTTGTGTTAGTTCAAGCTCTGTTGAATGCTCAGAGGTTCTCTGAAGGTGACCGGTATCTGAAACAAATGGGTGTTGACGGGCTTCTATCAAGTGTATATAGTTATAATGCGGTAATTGACTGTCTCTGCAAGGCTCGACGCATAGAGAATGCAGCTATGTTCTTAACAGAGATGCAGGATAGAGGTATTTCTCCGAATCTCGTAACTTTCAATACCTTTCTGAGCGGTTATAGCGTGAGGGGTGATGTAAAGAAGGTTCACGGCGTGCTAGAGAAGCTTCTTGTACATGGTTTCAAACCAGACGTGATCACTTTCAGTTTGATCATAAACTGTCTTTGCAGAGCAAAAGAAATTAAAGATGCATTTGACTGTTTCAAGGAGATGTTGGAATGGGGTATTGAGCCAAACGAGATCACATACAATATCTTGATTCGCTCCTGTTGTTCCACCGGAGATACCGATAGATCAGTGAAGCTGTTTGCGAAGATGAAGGAAAACGGGTTAAGTCCAGACCTTTATGCGTACAATGCGACTATTCAGAGTTTTTGCAAGATGAGAAAGGTTAAGAAGGCTGAGGAATTGCTTAAAACAATGCTGAGAATTGGTTTGAAACCAGATAACTTTACATATAGCACTCTCATCAAAGCTCTAAGTGAATCTGGAAGAGAGAGTGAAGCAAGAGAGATGTTCAGTTCAATCGAAAGACATGGATGTGTTCCAGATTCATATACTAAGCGTCTTGTTGAAGAACTTGACCTAAGAAAAAGTGGACTCTCGAGAGAAACCGTGTCAGCCTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006091 GO:0006119 GO:0006139 GO:0006163 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0006979 GO:0008150 GO:0008152 GO:0009117 GO:0009123 GO:0009126 GO:0009141 GO:0009144 GO:0009150 GO:0009161 GO:0009167 GO:0009199 GO:0009205 GO:0009259 GO:0009451 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0015980 GO:0016070 GO:0016310 GO:0016787 GO:0016788 GO:0017144 GO:0019637 GO:0019693 GO:0022900 GO:0022904 GO:0033993 GO:0034641 GO:0042221 GO:0042773 GO:0042775 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0045333 GO:0046034 GO:0046483 GO:0050896 GO:0055086 GO:0055114 GO:0071704 GO:0072521 GO:0090304 GO:0090305 GO:0097159 GO:0097305 GO:1901135 GO:1901360 GO:1901363 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

659

Amino Acids

74.26

Weight (kDa)

9.15

Isoelectric Point (pI)

29.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_3	PF13812	43 - 94	3.1e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	49 - 98	4.8e-14	PPR repeat family
PPR_long	PF17177	56 - 160	1.1e-08	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	80 - 113	5.8e-15	PPR repeat
PPR_2	PF13041	87 - 131	8.3e-17	PPR repeat family
PPR	PF01535	87 - 116	1.1e-06	PPR repeat
PPR_1	PF12854	118 - 148	5.4e-08	PPR repeat
PPR_long	PF17177	238 - 364	7.1e-08	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	284 - 341	5.5e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	291 - 323	2.9e-06	PPR repeat
PPR_2	PF13041	295 - 341	1.6e-13	PPR repeat family
TPR_24	PF23276	295 - 392	2.9e-07	Fungal tetratrico peptide repeats
PPR	PF01535	297 - 327	7.9e-06	PPR repeat
PPR_3	PF13812	319 - 375	1.4e-09	Pentatricopeptide repeat domain
PPR_2	PF13041	329 - 378	3.5e-11	PPR repeat family
TPR_24	PF23276	351 - 461	4.6e-08	Fungal tetratrico peptide repeats
PPR_3	PF13812	353 - 411	6.9e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	361 - 392	6.6e-10	PPR repeat
PPR_2	PF13041	364 - 412	5.1e-19	PPR repeat family
PPR	PF01535	367 - 397	3.4e-06	PPR repeat
PPR_long	PF17177	380 - 501	4.3e-16	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	389 - 447	5.3e-11	Pentatricopeptide repeat domain
PPR_1	PF12854	395 - 428	1.3e-09	PPR repeat
PPR	PF01535	402 - 432	9.8e-08	PPR repeat
PPR_2	PF13041	403 - 441	5.8e-10	PPR repeat family
PPR_1	PF12854	430 - 462	6.8e-07	PPR repeat
PPR_2	PF13041	436 - 482	3.3e-13	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0012154)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16890 AT3G16890
fragaria_vesca	FvH4_5g29230
malus_domestica	MD00G1073300.v1.1
prunus_persica	Prupe.1G002300_v2.0.a1 Prupe.1G002300_v2.0.a1 Prupe.1G002300_v2.0.a1
pyrus_communis	pycom420g00330
rosa_chinensis	RchiOBHm_Chr7g0221991
rosa_laevigata	RLG00000002105
rosa_multiflora	Rmu_co8447505.1_g000001 Rmu_sc0004325.1_g000020
rosa_roxburghii	Rroxscaffold_3G00237520
rosa_rugosa	Rorug07G0204800
rosa_samantha	Rh7AG345400 Rh7BG335900 Rh7CG362900 Rh7DG343200
rosa_wichuraiana	Rw7G029280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	549, 1284
AasI	GACNNNNNNGTC	1 cut(s)	1142
AccBSI	CCGCTC	1 cut(s)	1404
AccIII	TCCGGA	1 cut(s)	1057
AciI	CCGC	5 cut(s)	41, 829, 899, 1289, 1404
AclWI	GGATC	2 cut(s)	333, 648
AcsI	RAATTY	1 cut(s)	197
AcuI	CTGAAG	3 cut(s)	96, 356, 1242
AdeI	CACNNNGTG	1 cut(s)	1444
AfaI	GTAC	5 cut(s)	488, 538, 876, 1464, 1703
AgeI	ACCGGT	1 cut(s)	1230
AjiI	CACGTC	1 cut(s)	1483
AjnI	CCWGG	1 cut(s)	1162
Alw26I	GTCTC	7 cut(s)	224, 301, 336, 1007, 1097, 1112, 1307
AlwI	GGATC	2 cut(s)	333, 648
AlwNI	CAGNNNCTG	1 cut(s)	334
Ama87I	CYCGRG	1 cut(s)	1954
Aor13HI	TCCGGA	1 cut(s)	1057
AoxI	GGCC	1 cut(s)	370
ApeKI	GCWGC	4 cut(s)	44, 47, 1079, 1331
ApoI	RAATTY	1 cut(s)	197
AsiGI	ACCGGT	1 cut(s)	1230
Asp700I	GAANNNNTTC	1 cut(s)	702
AspS9I	GGNCC	1 cut(s)	371
AsuC2I	CCSGG	1 cut(s)	311
AsuHPI	GGTGA	6 cut(s)	193, 583, 844, 1052, 1238, 1433
AvaI	CYCGRG	1 cut(s)	1954
BbvCI	CCTCAGC	1 cut(s)	1752
BbvI	GCAGC	4 cut(s)	56, 59, 1066, 1343
BccI	CCATC	2 cut(s)	620, 715
BceAI	ACGGC	4 cut(s)	54, 886, 1134, 1456
BciT130I	CCWGG	1 cut(s)	1164
BclI	TGATCA	2 cut(s)	1485, 1500
BcnI	CCSGG	1 cut(s)	311
BcoDI	GTCTC	7 cut(s)	224, 301, 336, 1007, 1097, 1112, 1307
BfaI	CTAG	3 cut(s)	27, 347, 1448
BisI	GCNGC	6 cut(s)	42, 45, 48, 899, 1080, 1332
BlsI	GCNGC	6 cut(s)	43, 46, 49, 900, 1081, 1333
BmcAI	AGTACT	1 cut(s)	488
Bme1390I	CCNGG	2 cut(s)	311, 1164
BmeT110I	CYCGRG	1 cut(s)	1954
BmgBI	CACGTC	1 cut(s)	1483
BmgT120I	GGNCC	1 cut(s)	371
BmiI	GGNNCC	1 cut(s)	373
BmrFI	CCNGG	2 cut(s)	311, 1164
BmsI	GCATC	7 cut(s)	32, 553, 606, 816, 961, 1341, 1528
BplI	GAGNNNNNCTC	2 cut(s)	929, 961
Bpu10I	CCTNAGC	3 cut(s)	87, 321, 1752
BpuEI	CTTGAG	2 cut(s)	587, 1048
BpuMI	CCSGG	1 cut(s)	311
BsaBI	GATNNNNATC	1 cut(s)	767
BsaI	GGTCTC	2 cut(s)	224, 301
BsaJI	CCNNGG	1 cut(s)	1150
BsaWI	WCCGGW	4 cut(s)	637, 1057, 1230, 1628
Bse118I	RCCGGY	1 cut(s)	1230
Bse1I	ACTGG	1 cut(s)	1021
Bse8I	GATNNNNATC	1 cut(s)	767
BseAI	TCCGGA	1 cut(s)	1057
BseBI	CCWGG	1 cut(s)	1164
BseDI	CCNNGG	1 cut(s)	1150
BseGI	GGATG	2 cut(s)	74, 1895
BseJI	GATNNNNATC	1 cut(s)	767
BseMII	CTCAG	5 cut(s)	521, 1223, 1391, 1743, 1766
BseNI	ACTGG	1 cut(s)	1021
BseXI	GCAGC	4 cut(s)	56, 59, 1066, 1343
BseYI	CCCAGC	1 cut(s)	462
BshFI	GGCC	1 cut(s)	372
BshTI	ACCGGT	1 cut(s)	1230
BsiHKCI	CYCGRG	1 cut(s)	1954
BsiSI	CCGG	5 cut(s)	311, 638, 1058, 1231, 1629
BsmAI	GTCTC	7 cut(s)	224, 301, 336, 1007, 1097, 1112, 1307
BsmI	GAATGC	2 cut(s)	1210, 1333
BsnI	GGCC	1 cut(s)	372
Bso31I	GGTCTC	2 cut(s)	224, 301
BsoBI	CYCGRG	1 cut(s)	1954
Bsp13I	TCCGGA	1 cut(s)	1057
Bsp1407I	TGTACA	1 cut(s)	1462
Bsp143I	GATC	9 cut(s)	325, 453, 640, 768, 1108, 1485, 1500, 1590, 1643
BspACI	CCGC	5 cut(s)	41, 829, 899, 1289, 1404
BspANI	GGCC	1 cut(s)	372
BspCNI	CTCAG	5 cut(s)	520, 1222, 1392, 1744, 1767
BspEI	TCCGGA	1 cut(s)	1057
BspLI	GGNNCC	1 cut(s)	373
BspPI	GGATC	2 cut(s)	333, 648
BspTNI	GGTCTC	2 cut(s)	224, 301
BsrBI	CCGCTC	1 cut(s)	1404
BsrFI	RCCGGY	1 cut(s)	1230
BsrGI	TGTACA	1 cut(s)	1462
BsrI	ACTGG	1 cut(s)	1021
BssAI	RCCGGY	1 cut(s)	1230
BssECI	CCNNGG	1 cut(s)	1150
BssMI	GATC	9 cut(s)	325, 453, 640, 768, 1108, 1485, 1500, 1590, 1643
Bst2UI	CCWGG	1 cut(s)	1164
Bst4CI	ACNGT	6 cut(s)	491, 1139, 1301, 1511, 1550, 1966
Bst6I	CTCTTC	3 cut(s)	115, 332, 1837
BstAUI	TGTACA	1 cut(s)	1462
BstC8I	GCNNGC	2 cut(s)	896, 1445
BstDSI	CCRYGG	1 cut(s)	1150
BstEII	GGTNACC	1 cut(s)	1226
BstF5I	GGATG	2 cut(s)	74, 1895
BstKTI	GATC	9 cut(s)	328, 456, 643, 771, 1111, 1488, 1503, 1593, 1646
BstMAI	GTCTC	7 cut(s)	224, 301, 336, 1007, 1097, 1112, 1307
BstMBI	GATC	9 cut(s)	325, 453, 640, 768, 1108, 1485, 1500, 1590, 1643
BstMWI	GCNNNNNNNGC	6 cut(s)	20, 41, 47, 1410, 1453, 1706
BstNI	CCWGG	1 cut(s)	1164
BstPI	GGTNACC	1 cut(s)	1226
BstSCI	CCNGG	2 cut(s)	309, 1162
BstV1I	GCAGC	4 cut(s)	56, 59, 1066, 1343
BsuRI	GGCC	1 cut(s)	372
BtgI	CCRYGG	1 cut(s)	1150
BtgZI	GCGATG	1 cut(s)	1097
BtrI	CACGTC	1 cut(s)	1483
BtsCI	GGATG	2 cut(s)	74, 1895
BtsIMutI	CAGTG	1 cut(s)	1653
Cac8I	GCNNGC	2 cut(s)	896, 1445
CaiI	CAGNNNCTG	1 cut(s)	334
Cfr10I	RCCGGY	1 cut(s)	1230
Cfr13I	GGNCC	1 cut(s)	371
CseI	GACGC	2 cut(s)	1326, 1904
Csp6I	GTAC	5 cut(s)	487, 537, 875, 1463, 1702
CspAI	ACCGGT	1 cut(s)	1230
CviAII	CATG	4 cut(s)	668, 1106, 1466, 1886
CviQI	GTAC	5 cut(s)	487, 537, 875, 1463, 1702
DpnI	GATC	9 cut(s)	327, 455, 642, 770, 1110, 1487, 1502, 1592, 1645
DpnII	GATC	9 cut(s)	325, 453, 640, 768, 1108, 1485, 1500, 1590, 1643
DraIII	CACNNNGTG	1 cut(s)	1444
DrdI	GACNNNNNNGTC	1 cut(s)	1142
DseDI	GACNNNNNNGTC	1 cut(s)	1142
Eam1104I	CTCTTC	3 cut(s)	115, 332, 1837
EarI	CTCTTC	3 cut(s)	115, 332, 1837
Eco31I	GGTCTC	2 cut(s)	224, 301
Eco32I	GATATC	1 cut(s)	513
Eco57I	CTGAAG	3 cut(s)	96, 356, 1242
Eco88I	CYCGRG	1 cut(s)	1954
Eco91I	GGTNACC	1 cut(s)	1226
EcoO109I	RGGNCCY	1 cut(s)	371
EcoO65I	GGTNACC	1 cut(s)	1226
EcoRI	GAATTC	1 cut(s)	197
EcoRII	CCWGG	1 cut(s)	1162
EcoRV	GATATC	1 cut(s)	513
EcoT22I	ATGCAT	1 cut(s)	1543
FaeI	CATG	4 cut(s)	671, 1109, 1469, 1889
FatI	CATG	4 cut(s)	667, 1105, 1465, 1885
FauI	CCCGC	1 cut(s)	822
FbaI	TGATCA	2 cut(s)	1485, 1500
Fnu4HI	GCNGC	6 cut(s)	42, 45, 48, 899, 1080, 1332
FokI	GGATG	2 cut(s)	61, 1902
Fsp4HI	GCNGC	6 cut(s)	42, 45, 48, 899, 1080, 1332
FspBI	CTAG	3 cut(s)	27, 347, 1448
GluI	GCNGC	6 cut(s)	42, 45, 48, 899, 1080, 1332
GsaI	CCCAGC	1 cut(s)	466
HaeIII	GGCC	1 cut(s)	372
HapII	CCGG	5 cut(s)	311, 638, 1058, 1231, 1629
HgaI	GACGC	2 cut(s)	1326, 1904
Hin1II	CATG	4 cut(s)	671, 1109, 1469, 1889
HincII	GTYRAC	1 cut(s)	1255
HindII	GTYRAC	1 cut(s)	1255
HindIII	AAGCTT	1 cut(s)	1454
HpaII	CCGG	5 cut(s)	311, 638, 1058, 1231, 1629
HphI	GGTGA	6 cut(s)	193, 583, 844, 1052, 1238, 1433
Hpy99I	CGWCG	3 cut(s)	40, 776, 1320
HpyAV	CCTTC	6 cut(s)	676, 725, 1217, 1426, 1663, 1741
HpyCH4III	ACNGT	6 cut(s)	491, 1139, 1301, 1511, 1550, 1966
HpyCH4IV	ACGT	1 cut(s)	1482
HpyCH4V	TGCA	9 cut(s)	250, 678, 955, 1308, 1331, 1354, 1518, 1541, 1728
HpyF10VI	GCNNNNNNNGC	6 cut(s)	20, 41, 47, 1410, 1453, 1706
HpySE526I	ACGT	1 cut(s)	1482
Hsp92II	CATG	4 cut(s)	671, 1109, 1469, 1889
Kpn2I	TCCGGA	1 cut(s)	1057
Ksp22I	TGATCA	2 cut(s)	1485, 1500
Kzo9I	GATC	9 cut(s)	325, 453, 640, 768, 1108, 1485, 1500, 1590, 1643
LmnI	GCTCC	1 cut(s)	1619
Lsp1109I	GCAGC	4 cut(s)	56, 59, 1066, 1343
LweI	GCATC	7 cut(s)	32, 553, 606, 816, 961, 1341, 1528
MaeI	CTAG	3 cut(s)	27, 347, 1448
MaeII	ACGT	1 cut(s)	1482
MaeIII	GTNAC	4 cut(s)	143, 965, 1226, 1381
MalI	GATC	9 cut(s)	327, 455, 642, 770, 1110, 1487, 1502, 1592, 1645
MbiI	CCGCTC	1 cut(s)	1404
MboI	GATC	9 cut(s)	325, 453, 640, 768, 1108, 1485, 1500, 1590, 1643
MboII	GAAGA	8 cut(s)	9, 102, 349, 480, 1045, 1675, 1854, 1937
MfeI	CAATTG	1 cut(s)	815
MlyI	GAGTC	2 cut(s)	938, 1944
MmeI	TCCRAC	2 cut(s)	324, 1545
Mph1103I	ATGCAT	1 cut(s)	1543
MroI	TCCGGA	1 cut(s)	1057
MroXI	GAANNNNTTC	1 cut(s)	702
MseI	TTAA	8 cut(s)	399, 714, 1158, 1343, 1533, 1682, 1743, 1764
MslI	CAYNNNNRTG	1 cut(s)	1890
MspI	CCGG	5 cut(s)	311, 638, 1058, 1231, 1629
MspR9I	CCNGG	2 cut(s)	311, 1164
MunI	CAATTG	1 cut(s)	815
Mva1269I	GAATGC	2 cut(s)	1210, 1333
MvaI	CCWGG	1 cut(s)	1164
MwoI	GCNNNNNNNGC	6 cut(s)	20, 41, 47, 1410, 1453, 1706
NciI	CCSGG	1 cut(s)	311
NdeII	GATC	9 cut(s)	325, 453, 640, 768, 1108, 1485, 1500, 1590, 1643
NlaIII	CATG	4 cut(s)	671, 1109, 1469, 1889
NlaIV	GGNNCC	1 cut(s)	373
NmuCI	GTSAC	1 cut(s)	1226
NsiI	ATGCAT	1 cut(s)	1543
PaeR7I	CTCGAG	1 cut(s)	1954
PcsI	WCGNNNNNNNCGW	1 cut(s)	240
PctI	GAATGC	2 cut(s)	1210, 1333
PdmI	GAANNNNTTC	1 cut(s)	702
PinAI	ACCGGT	1 cut(s)	1230
PkrI	GCNGC	6 cut(s)	43, 46, 49, 900, 1081, 1333
PleI	GAGTC	2 cut(s)	938, 1944
PpsI	GAGTC	2 cut(s)	938, 1944
PsiI	TTATAA	2 cut(s)	549, 1284
Psp6I	CCWGG	1 cut(s)	1162
PspEI	GGTNACC	1 cut(s)	1226
PspFI	CCCAGC	1 cut(s)	462
PspGI	CCWGG	1 cut(s)	1162
PspN4I	GGNNCC	1 cut(s)	373
PspPI	GGNCC	1 cut(s)	371
PsrI	GAACNNNNNNTAC	4 cut(s)	128, 160, 1419, 1451
PstNI	CAGNNNCTG	1 cut(s)	334
RsaI	GTAC	5 cut(s)	488, 538, 876, 1464, 1703
RsaNI	GTAC	5 cut(s)	487, 537, 875, 1463, 1702
RseI	CAYNNNNRTG	1 cut(s)	1890
SaqAI	TTAA	8 cut(s)	399, 714, 1158, 1343, 1533, 1682, 1743, 1764
SatI	GCNGC	6 cut(s)	42, 45, 48, 899, 1080, 1332
Sau3AI	GATC	9 cut(s)	325, 453, 640, 768, 1108, 1485, 1500, 1590, 1643
Sau96I	GGNCC	1 cut(s)	371
ScaI	AGTACT	1 cut(s)	488
SchI	GAGTC	2 cut(s)	938, 1944
ScrFI	CCNGG	2 cut(s)	311, 1164
SfaNI	GCATC	7 cut(s)	32, 553, 606, 816, 961, 1341, 1528
Sfr274I	CTCGAG	1 cut(s)	1954
SlaI	CTCGAG	1 cut(s)	1954
SmiMI	CAYNNNNRTG	1 cut(s)	1890
SmlI	CTYRAG	3 cut(s)	602, 1027, 1954
SmoI	CTYRAG	3 cut(s)	602, 1027, 1954
SsiI	CCGC	5 cut(s)	41, 829, 899, 1289, 1404
SspMI	CTAG	3 cut(s)	27, 347, 1448
StyD4I	CCNGG	2 cut(s)	309, 1162
TaaI	ACNGT	6 cut(s)	491, 1139, 1301, 1511, 1550, 1966
TaiI	ACGT	1 cut(s)	1485
TaqI	TCGA	8 cut(s)	211, 229, 306, 706, 771, 1315, 1878, 1955
TatI	WGTACW	3 cut(s)	486, 536, 1462
TauI	GCSGC	2 cut(s)	44, 901
Tru1I	TTAA	8 cut(s)	399, 714, 1158, 1343, 1533, 1682, 1743, 1764
Tru9I	TTAA	8 cut(s)	399, 714, 1158, 1343, 1533, 1682, 1743, 1764
TscAI	CASTG	1 cut(s)	1653
TseFI	GTSAC	1 cut(s)	1226
TseI	GCWGC	4 cut(s)	44, 47, 1079, 1331
Tsp45I	GTSAC	1 cut(s)	1226
TspDTI	ATGAA	6 cut(s)	450, 542, 711, 867, 1682, 1893
TspGWI	ACGGA	2 cut(s)	67, 878
TspRI	CASTG	1 cut(s)	1653
XapI	RAATTY	1 cut(s)	197
XbaI	TCTAGA	1 cut(s)	26
XhoI	CTCGAG	1 cut(s)	1954
XmnI	GAANNNNTTC	1 cut(s)	702
XspI	CTAG	3 cut(s)	27, 347, 1448
ZrmI	AGTACT	1 cut(s)	488
Zsp2I	ATGCAT	1 cut(s)	1543

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.