Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0012154

Physical Location & Seq

Genomic Coordinates Forward (+)

25537571 .. 25541630

Gene Structure 4060 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000002105

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2184 bp

ATGAGATGGCTTTCTTCTTTAGCCTCTAGGGTCTCACCGGCGCTCAGAACCCTCCCTCACAAACCAGCCAATCGGAGTGAGCCTTCTTCAAAAATAAAACCCAGCAAGCCTCTGCCTTCTGCTCCTCACAAAGGTAATTACTTTGAGCTTCGAAACAATCTCATTTCAGCTAAGAATACCAATTTTCGTGTTGCTAATAAACCAATCGATCACCTCTACATTGCTCGAATTCTTTCTCGCAAGGACTGGTTTTTGTTACTCGACCATGAGTTGAATGCCAGGAGGATCGTTTTGAATCCTCAGGCCGTTGCTAGTGTCTTGCAAAACCAAGAAAACCCATTGCACCCTTTCAAGTTTTCGATATGGGTTTCGAATATTGATCCCTTGTTCTTAAAGAATCATTCGGTTCGCAGTGTTTTAGCCAACACCCTTTTCAGGAAAGGCCCAGTTGTGTTGTCTGTTGAATTGCTAAAAGATATTAACAACTCAGGTTTGAAGGTCACTGAGGATTTGCTTTGCATATTAATTGGTAGCTGGGGGAGGTTGGGTTTGGCAAAGTATTGTGCTGAGGTTTTTGGGCAAATTTCGTTTTTGGGTCTTGGTCTTAGCACTAGGTTGTACAATGCTGTGATCGATGCGTTAGTCAAGTCCAATTCACTTGACTTGGCTTATTTGAAATTCCAACAGATGCCTGCAGATAATTGCTATCCTGATAGGTTCACTTACAATATCCTTATTCATGGAGTTTGCAAGATTGGTATTGTGGATGAAGCGCTTCGTTTAGTCAAGCAAATGGAGGGCCTGGGATATTTGCCTAATGTTCGTACTTATACAATTCTGGTTGATGGGTTTTGTAATTCAAGGAGGGTTGACGAGGCCTTTGCGGTTATGAAGATAATGAGGGATAAGAATGTGACTCCTAATGAAGCTACTGTCAGATCATTGGTTCATGGGGTGTTTCGTTGCATGGACCCCAGTAAGGCTTTTGAGTTGTTATTAAGTTTTGTTGAAAGGGAGTCTCTCTTGTTTAAGGTAGCTTGTGATACCATACTGTATTGCCTTTCAATTAATCACATGGCAAGGGAGATTGCTGTGTTTTTAAAGAAATCCGGAGTGAAAGGTTATTTGCCTGACAGTTCAACATTTAACATTGCAATGGTTTGTTTGACAAAGGAATCAGCTCATCCTCGGCATGAGGTACATGAAATATTTGAAAGTTTTTTACATCGAGGTGGAAAACCAGGATTTGGTACTTATCTTGCATTAATTGAAGCTATGTACAAGTCTGGAAATGTTGATGAGGGGAATCAAATCTTTGAGCAAATGATCAAGGATGGACTTGTAGCTAGTGTCTTCTCATATAACATGGTAATTGATTGCTTTTGCAAAGCCCAAATTATGGACATGGCATCAAAGGCTTTTGGAGATATGCAGCAGAAAGGTATTCCTCCTAACCTTGTAACATTCAATACACTTCTTACCGGATATTGCAAGGCTGGAGAGGTAAGTAAGGCACATGAACTGTTGATAATGCTCCTAGAACATGGTTTCAAACCGGATATATTCACCTTTAGTACAATAATTGACGGACTCTGTCGGGTGCACCAGATTGATGACGCTTTCGATTGTTTTGCTGAGATGGTCAGGTGGGGGATCACTCCAAATGTCATCACATACAATATATTGTTACGCTCTTTGTGTTTCGTTGGAGATATTGCTAGAGGAGTGCGACTAATGAAAAGTATGCAGGTAGATGGAATAAAACCAGATGCTTACTCTTTCAGTTATCTTATTCAAAGTCTTTGTAGGATGAACAAGGTTGAGAAAGCAGAGGAATTTTTTCTTGCTATGTTGAGATCAGGTTTGAATCCTGACAATTATACATACAGTGTTTTTATCAAGGCATTGTGTGACTTGGGAAGACTTGACGTGGCAAAGGAGATATTCCTCTCTATGGAAGCATATGATTGTTTACCTGATTCTTCTATTTGCATTGTAATGTTGGATTCTCTGGTTCAGCATAACCGTTTTGAAGAGGCCTGTAGAATAGTTGCAAGAGACTTCAATTTATCTCCTGGCTGCTTTTCAGGTTTAGTTACGCTCAAGGAGGTGAGTGGACAAATAGCGTACATAGACGGCATTTCTTCCAGACAAGGCAGTGTGGCTGCTAAGTTTTTCTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006091 GO:0006119 GO:0006139 GO:0006163 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0006979 GO:0008150 GO:0008152 GO:0009117 GO:0009123 GO:0009126 GO:0009141 GO:0009144 GO:0009150 GO:0009161 GO:0009167 GO:0009199 GO:0009205 GO:0009259 GO:0009451 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0015980 GO:0016070 GO:0016310 GO:0016787 GO:0016788 GO:0017144 GO:0019637 GO:0019693 GO:0022900 GO:0022904 GO:0033993 GO:0034641 GO:0042221 GO:0042773 GO:0042775 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0045333 GO:0046034 GO:0046483 GO:0050896 GO:0055086 GO:0055114 GO:0071704 GO:0072521 GO:0090304 GO:0090305 GO:0097159 GO:0097305 GO:1901135 GO:1901360 GO:1901363 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

728

Amino Acids

81.65

Weight (kDa)

8.55

Isoelectric Point (pI)

32.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_long	PF17177	200 - 335	2.2e-12	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	206 - 251	1.7e-11	PPR repeat family
PPR_1	PF12854	234 - 266	1.1e-11	PPR repeat
PPR_2	PF13041	241 - 286	3.6e-14	PPR repeat family
PPR_1	PF12854	269 - 301	1.1e-10	PPR repeat
TPR_24	PF23276	277 - 323	2.4e-06	Fungal tetratrico peptide repeats
PPR_2	PF13041	280 - 319	1.7e-07	PPR repeat family
PPR_2	PF13041	418 - 463	1.1e-08	PPR repeat family
PPR_long	PF17177	430 - 512	8.9e-08	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	450 - 495	1.2e-12	PPR repeat family
TPR_24	PF23276	463 - 581	1.6e-07	Fungal tetratrico peptide repeats
PPR_3	PF13812	475 - 529	1.1e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	480 - 509	1.5e-10	PPR repeat
PPR_2	PF13041	484 - 533	3.5e-16	PPR repeat family
PPR	PF01535	487 - 517	1.7e-06	PPR repeat
PPR_3	PF13812	514 - 564	1.1e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	516 - 548	7.3e-10	PPR repeat
PPR_2	PF13041	526 - 567	3.9e-15	PPR repeat family
PPR_long	PF17177	535 - 642	6.7e-08	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	544 - 599	6.1e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	550 - 582	4.8e-07	PPR repeat
PPR_2	PF13041	554 - 603	5.5e-13	PPR repeat family
PPR_1	PF12854	585 - 614	2.2e-07	PPR repeat
PPR_2	PF13041	597 - 638	4.1e-12	PPR repeat family
PPR_1	PF12854	621 - 653	9.3e-07	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0012154)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16890 AT3G16890
fragaria_vesca	FvH4_5g29230
malus_domestica	MD00G1073300.v1.1
prunus_persica	Prupe.1G002300_v2.0.a1 Prupe.1G002300_v2.0.a1 Prupe.1G002300_v2.0.a1
pyrus_communis	pycom420g00330
rosa_chinensis	RchiOBHm_Chr7g0221991
rosa_laevigata	RLG00000002105
rosa_multiflora	Rmu_co8447505.1_g000001 Rmu_sc0004325.1_g000020
rosa_roxburghii	Rroxscaffold_3G00237520
rosa_rugosa	Rorug07G0204800
rosa_samantha	Rh7AG345400 Rh7BG335900 Rh7CG362900 Rh7DG343200
rosa_wichuraiana	Rw7G029280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1738
AccB7I	CCANNNNNTGG	2 cut(s)	1247, 1399
AccIII	TCCGGA	1 cut(s)	1109
AciI	CCGC	1 cut(s)	884
AclWI	GGATC	3 cut(s)	293, 374, 1661
AcsI	RAATTY	4 cut(s)	228, 582, 677, 1835
AfaI	GTAC	7 cut(s)	620, 826, 1200, 1252, 1280, 1576, 2129
AfeI	AGCGCT	1 cut(s)	774
AfiI	CCNNNNNNNGG	6 cut(s)	131, 435, 979, 1247, 1399, 1954
AjiI	CACGTC	1 cut(s)	1930
AjnI	CCWGG	4 cut(s)	278, 801, 1240, 2074
AjuI	GAANNNNNNNTTGG	2 cut(s)	416, 448
AluBI	AGCT	8 cut(s)	148, 170, 534, 929, 1037, 1181, 1274, 1346
AluI	AGCT	8 cut(s)	148, 170, 534, 929, 1037, 1181, 1274, 1346
Alw21I	GWGCWC	1 cut(s)	1605
Alw26I	GTCTC	3 cut(s)	37, 1023, 2052
Alw44I	GTGCAC	1 cut(s)	1601
AlwI	GGATC	3 cut(s)	293, 374, 1661
Aor13HI	TCCGGA	1 cut(s)	1109
Aor51HI	AGCGCT	1 cut(s)	774
AoxI	GGCC	5 cut(s)	303, 442, 799, 876, 2037
ApaLI	GTGCAC	1 cut(s)	1601
ApeKI	GCWGC	3 cut(s)	1432, 2079, 2165
ApoI	RAATTY	4 cut(s)	228, 582, 677, 1835
ArsI	GACNNNNNNTTYG	2 cut(s)	863, 895
AseI	ATTAAT	3 cut(s)	524, 1068, 1265
Asp700I	GAANNNNTTC	3 cut(s)	232, 774, 1839
AspLEI	GCGC	2 cut(s)	43, 775
AspS9I	GGNCC	3 cut(s)	443, 799, 970
AsuHPI	GGTGA	4 cut(s)	27, 203, 1558, 2122
AsuII	TTCGAA	2 cut(s)	151, 371
AvaII	GGWCC	1 cut(s)	970
AxyI	CCTNAGG	1 cut(s)	300
BaeGI	GKGCMC	1 cut(s)	1605
BbsI	GAAGAC	2 cut(s)	1345, 1927
Bbv12I	GWGCWC	1 cut(s)	1605
BbvCI	CCTCAGC	1 cut(s)	567
BbvI	GCAGC	3 cut(s)	1444, 2066, 2152
BccI	CCATC	4 cut(s)	839, 1328, 1633, 1748
BceAI	ACGGC	2 cut(s)	290, 2152
BcgI	CGANNNNNNTGC	4 cut(s)	863, 897, 1613, 1647
BciT130I	CCWGG	4 cut(s)	280, 803, 1242, 2076
BclI	TGATCA	1 cut(s)	1326
BcoDI	GTCTC	3 cut(s)	37, 1023, 2052
BfaI	CTAG	6 cut(s)	27, 312, 612, 1347, 1538, 1719
BfmI	CTRYAG	2 cut(s)	693, 2041
BfoI	RGCGCY	2 cut(s)	44, 776
BfuAI	ACCTGC	1 cut(s)	1738
BisI	GCNGC	3 cut(s)	1433, 2080, 2166
BlsI	GCNGC	3 cut(s)	1434, 2081, 2167
Bme1390I	CCNGG	4 cut(s)	280, 803, 1242, 2076
Bme18I	GGWCC	1 cut(s)	970
BmgBI	CACGTC	1 cut(s)	1930
BmgT120I	GGNCC	3 cut(s)	443, 799, 970
BmiI	GGNNCC	1 cut(s)	972
BmrFI	CCNGG	4 cut(s)	280, 803, 1242, 2076
BmrI	ACTGGG	2 cut(s)	440, 969
BmsI	GCATC	4 cut(s)	625, 678, 1418, 1759
BmuI	ACTGGG	2 cut(s)	440, 969
BpiI	GAAGAC	2 cut(s)	1345, 1927
BpmI	CTGGAG	1 cut(s)	1518
Bpu10I	CCTNAGC	1 cut(s)	567
Bpu14I	TTCGAA	2 cut(s)	151, 371
BpuEI	CTTGAG	1 cut(s)	2087
Bsa29I	ATCGAT	2 cut(s)	207, 633
BsaI	GGTCTC	1 cut(s)	37
BsaJI	CCNNGG	2 cut(s)	802, 1187
BsaWI	WCCGGW	3 cut(s)	1109, 1481, 1555
BsaXI	ACNNNNNCTCC	2 cut(s)	532, 562
Bsc4I	CCNNNNNNNGG	6 cut(s)	131, 435, 979, 1247, 1399, 1954
Bse118I	RCCGGY	1 cut(s)	37
Bse1I	ACTGG	3 cut(s)	251, 446, 975
Bse21I	CCTNAGG	1 cut(s)	300
Bse3DI	GCAATG	4 cut(s)	219, 338, 1149, 1161
BseAI	TCCGGA	1 cut(s)	1109
BseBI	CCWGG	4 cut(s)	280, 803, 1242, 2076
BseCI	ATCGAT	2 cut(s)	207, 633
BseDI	CCNNGG	2 cut(s)	802, 1187
BseGI	GGATG	4 cut(s)	772, 1183, 1339, 1815
BseLI	CCNNNNNNNGG	6 cut(s)	131, 435, 979, 1247, 1399, 1954
BseMI	GCAATG	4 cut(s)	219, 338, 1149, 1161
BseMII	CTCAG	6 cut(s)	58, 314, 495, 501, 558, 1626
BseNI	ACTGG	3 cut(s)	251, 446, 975
BseRI	GAGGAG	2 cut(s)	114, 1737
BseSI	GKGCMC	1 cut(s)	1605
BseXI	GCAGC	3 cut(s)	1444, 2066, 2152
BseYI	CCCAGC	2 cut(s)	101, 534
BshFI	GGCC	5 cut(s)	305, 444, 801, 878, 2039
BshVI	ATCGAT	2 cut(s)	207, 633
BsiHKAI	GWGCWC	1 cut(s)	1605
BsiSI	CCGG	4 cut(s)	38, 1110, 1482, 1556
BslI	CCNNNNNNNGG	6 cut(s)	131, 435, 979, 1247, 1399, 1954
BsmAI	GTCTC	3 cut(s)	37, 1023, 2052
BsmI	GAATGC	1 cut(s)	280
BsnI	GGCC	5 cut(s)	305, 444, 801, 878, 2039
Bso31I	GGTCTC	1 cut(s)	37
Bsp119I	TTCGAA	2 cut(s)	151, 371
Bsp1286I	GDGCHC	1 cut(s)	1605
Bsp13I	TCCGGA	1 cut(s)	1109
Bsp1407I	TGTACA	2 cut(s)	618, 1278
Bsp143I	GATC	8 cut(s)	208, 285, 379, 630, 938, 1326, 1653, 1856
BspACI	CCGC	1 cut(s)	884
BspANI	GGCC	5 cut(s)	305, 444, 801, 878, 2039
BspCNI	CTCAG	6 cut(s)	57, 313, 496, 500, 559, 1627
BspDI	ATCGAT	2 cut(s)	207, 633
BspEI	TCCGGA	1 cut(s)	1109
BspLI	GGNNCC	1 cut(s)	972
BspMAI	CTGCAG	1 cut(s)	697
BspMI	ACCTGC	1 cut(s)	1738
BspPI	GGATC	3 cut(s)	293, 374, 1661
BspT104I	TTCGAA	2 cut(s)	151, 371
BspTNI	GGTCTC	1 cut(s)	37
BsrDI	GCAATG	4 cut(s)	219, 338, 1149, 1161
BsrFI	RCCGGY	1 cut(s)	37
BsrGI	TGTACA	2 cut(s)	618, 1278
BsrI	ACTGG	3 cut(s)	251, 446, 975
BssAI	RCCGGY	1 cut(s)	37
BssECI	CCNNGG	2 cut(s)	802, 1187
BssMI	GATC	8 cut(s)	208, 285, 379, 630, 938, 1326, 1653, 1856
Bst2UI	CCWGG	4 cut(s)	280, 803, 1242, 2076
Bst4CI	ACNGT	6 cut(s)	934, 1053, 1136, 1524, 1889, 2027
Bst6I	CTCTTC	1 cut(s)	2028
BstAUI	TGTACA	2 cut(s)	618, 1278
BstBI	TTCGAA	2 cut(s)	151, 371
BstC8I	GCNNGC	2 cut(s)	107, 693
BstDEI	CTNAG	9 cut(s)	44, 171, 300, 487, 504, 567, 605, 1635, 2169
BstENI	CCTNNNNNAGG	1 cut(s)	129
BstF5I	GGATG	4 cut(s)	772, 1183, 1339, 1815
BstH2I	RGCGCY	2 cut(s)	44, 776
BstHHI	GCGC	2 cut(s)	43, 775
BstKTI	GATC	8 cut(s)	211, 288, 382, 633, 941, 1329, 1656, 1859
BstMAI	GTCTC	3 cut(s)	37, 1023, 2052
BstMBI	GATC	8 cut(s)	208, 285, 379, 630, 938, 1326, 1653, 1856
BstMWI	GCNNNNNNNGC	1 cut(s)	1415
BstNI	CCWGG	4 cut(s)	280, 803, 1242, 2076
BstSCI	CCNGG	4 cut(s)	278, 801, 1240, 2074
BstSFI	CTRYAG	2 cut(s)	693, 2041
BstSLI	GKGCMC	1 cut(s)	1605
BstV1I	GCAGC	3 cut(s)	1444, 2066, 2152
BstV2I	GAAGAC	2 cut(s)	1345, 1927
Bsu15I	ATCGAT	2 cut(s)	207, 633
Bsu36I	CCTNAGG	1 cut(s)	300
BsuRI	GGCC	5 cut(s)	305, 444, 801, 878, 2039
BsuTUI	ATCGAT	2 cut(s)	207, 633
BtrI	CACGTC	1 cut(s)	1930
BtsCI	GGATG	4 cut(s)	772, 1183, 1339, 1815
BtsI	GCAGTG	2 cut(s)	418, 2164
BtsIMutI	CAGTG	4 cut(s)	418, 501, 1894, 2164
BveI	ACCTGC	1 cut(s)	1738
Cac8I	GCNNGC	2 cut(s)	107, 693
CfoI	GCGC	2 cut(s)	43, 775
Cfr10I	RCCGGY	1 cut(s)	37
Cfr13I	GGNCC	3 cut(s)	443, 799, 970
ClaI	ATCGAT	2 cut(s)	207, 633
CseI	GACGC	1 cut(s)	1625
Csp6I	GTAC	7 cut(s)	619, 825, 1199, 1251, 1279, 1575, 2128
CviQI	GTAC	7 cut(s)	619, 825, 1199, 1251, 1279, 1575, 2128
DdeI	CTNAG	9 cut(s)	44, 171, 300, 487, 504, 567, 605, 1635, 2169
DpnI	GATC	8 cut(s)	210, 287, 381, 632, 940, 1328, 1655, 1858
DpnII	GATC	8 cut(s)	208, 285, 379, 630, 938, 1326, 1653, 1856
DraI	TTTAAA	1 cut(s)	1101
Eam1104I	CTCTTC	1 cut(s)	2028
EarI	CTCTTC	1 cut(s)	2028
Eco147I	AGGCCT	2 cut(s)	878, 2039
Eco31I	GGTCTC	1 cut(s)	37
Eco47I	GGWCC	1 cut(s)	970
Eco47III	AGCGCT	1 cut(s)	774
Eco81I	CCTNAGG	1 cut(s)	300
EcoNI	CCTNNNNNAGG	1 cut(s)	129
EcoO109I	RGGNCCY	1 cut(s)	799
EcoRI	GAATTC	1 cut(s)	228
EcoRII	CCWGG	4 cut(s)	278, 801, 1240, 2074
FauNDI	CATATG	1 cut(s)	1963
FbaI	TGATCA	1 cut(s)	1326
Fnu4HI	GCNGC	3 cut(s)	1433, 2080, 2166
FokI	GGATG	4 cut(s)	779, 1170, 1346, 1822
Fsp4HI	GCNGC	3 cut(s)	1433, 2080, 2166
FspBI	CTAG	6 cut(s)	27, 312, 612, 1347, 1538, 1719
GlaI	GCGC	2 cut(s)	42, 774
GluI	GCNGC	3 cut(s)	1433, 2080, 2166
GsaI	CCCAGC	2 cut(s)	105, 538
GsuI	CTGGAG	1 cut(s)	1518
HaeII	RGCGCY	2 cut(s)	44, 776
HaeIII	GGCC	5 cut(s)	305, 444, 801, 878, 2039
HapII	CCGG	4 cut(s)	38, 1110, 1482, 1556
HgaI	GACGC	1 cut(s)	1625
HhaI	GCGC	2 cut(s)	43, 775
Hin6I	GCGC	2 cut(s)	41, 773
HinP1I	GCGC	2 cut(s)	41, 773
HincII	GTYRAC	1 cut(s)	871
HindII	GTYRAC	1 cut(s)	871
HpaII	CCGG	4 cut(s)	38, 1110, 1482, 1556
HphI	GGTGA	4 cut(s)	27, 203, 1558, 2122
Hpy166II	GTNNAC	5 cut(s)	720, 871, 1603, 1973, 2117
Hpy188I	TCNGA	3 cut(s)	47, 75, 938
Hpy188III	TCNNGA	6 cut(s)	436, 710, 1110, 1287, 1871, 2148
Hpy8I	GTNNAC	5 cut(s)	720, 871, 1603, 1973, 2117
HpyAV	CCTTC	3 cut(s)	93, 126, 490
HpyCH4III	ACNGT	6 cut(s)	934, 1053, 1136, 1524, 1889, 2027
HpyCH4IV	ACGT	1 cut(s)	1929
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1415
HpyF3I	CTNAG	9 cut(s)	44, 171, 300, 487, 504, 567, 605, 1635, 2169
HpySE526I	ACGT	1 cut(s)	1929
HspAI	GCGC	2 cut(s)	41, 773
Kpn2I	TCCGGA	1 cut(s)	1109
Ksp22I	TGATCA	1 cut(s)	1326
Kzo9I	GATC	8 cut(s)	208, 285, 379, 630, 938, 1326, 1653, 1856
LmnI	GCTCC	2 cut(s)	127, 1539
Lsp1109I	GCAGC	3 cut(s)	1444, 2066, 2152
LweI	GCATC	4 cut(s)	625, 678, 1418, 1759
MaeI	CTAG	6 cut(s)	27, 312, 612, 1347, 1538, 1719
MaeII	ACGT	1 cut(s)	1929
MaeIII	GTNAC	7 cut(s)	255, 499, 913, 1459, 1686, 1910, 2095
MalI	GATC	8 cut(s)	210, 287, 381, 632, 940, 1328, 1655, 1858
MboI	GATC	8 cut(s)	208, 285, 379, 630, 938, 1326, 1653, 1856
MboII	GAAGA	8 cut(s)	6, 78, 904, 1345, 1932, 1974, 2045, 2136
MhlI	GDGCHC	1 cut(s)	1605
MlyI	GAGTC	3 cut(s)	910, 1025, 1584
MmeI	TCCRAC	3 cut(s)	706, 1687, 1983
MroI	TCCGGA	1 cut(s)	1109
MroXI	GAANNNNTTC	3 cut(s)	232, 774, 1839
MseI	TTAA	9 cut(s)	392, 480, 524, 998, 1029, 1068, 1100, 1146, 1265
MslI	CAYNNNNRTG	3 cut(s)	1154, 1230, 1997
MspI	CCGG	4 cut(s)	38, 1110, 1482, 1556
MspR9I	CCNGG	4 cut(s)	280, 803, 1242, 2076
Mva1269I	GAATGC	1 cut(s)	280
MvaI	CCWGG	4 cut(s)	280, 803, 1242, 2076
MwoI	GCNNNNNNNGC	1 cut(s)	1415
NdeI	CATATG	1 cut(s)	1963
NdeII	GATC	8 cut(s)	208, 285, 379, 630, 938, 1326, 1653, 1856
NlaIV	GGNNCC	1 cut(s)	972
NmeAIII	GCCGAG	1 cut(s)	1168
NmuCI	GTSAC	3 cut(s)	499, 913, 1910
NspV	TTCGAA	2 cut(s)	151, 371
PceI	AGGCCT	2 cut(s)	878, 2039
PctI	GAATGC	1 cut(s)	280
PdmI	GAANNNNTTC	3 cut(s)	232, 774, 1839
PfeI	GAWTC	7 cut(s)	295, 397, 1175, 1306, 1867, 1979, 2006
PflFI	GACNNNGTC	1 cut(s)	1593
PflMI	CCANNNNNTGG	2 cut(s)	1247, 1399
PkrI	GCNGC	3 cut(s)	1434, 2081, 2167
PleI	GAGTC	3 cut(s)	910, 1024, 1584
PpsI	GAGTC	3 cut(s)	910, 1024, 1584
PshBI	ATTAAT	3 cut(s)	524, 1068, 1265
Psp6I	CCWGG	4 cut(s)	278, 801, 1240, 2074
PspFI	CCCAGC	2 cut(s)	101, 534
PspGI	CCWGG	4 cut(s)	278, 801, 1240, 2074
PspN4I	GGNNCC	1 cut(s)	972
PspPI	GGNCC	3 cut(s)	443, 799, 970
PstI	CTGCAG	1 cut(s)	697
PsyI	GACNNNGTC	1 cut(s)	1593
RsaI	GTAC	7 cut(s)	620, 826, 1200, 1252, 1280, 1576, 2129
RsaNI	GTAC	7 cut(s)	619, 825, 1199, 1251, 1279, 1575, 2128
RseI	CAYNNNNRTG	3 cut(s)	1154, 1230, 1997
SaqAI	TTAA	9 cut(s)	392, 480, 524, 998, 1029, 1068, 1100, 1146, 1265
SatI	GCNGC	3 cut(s)	1433, 2080, 2166
Sau3AI	GATC	8 cut(s)	208, 285, 379, 630, 938, 1326, 1653, 1856
Sau96I	GGNCC	3 cut(s)	443, 799, 970
SchI	GAGTC	3 cut(s)	910, 1025, 1584
ScrFI	CCNGG	4 cut(s)	280, 803, 1242, 2076
SduI	GDGCHC	1 cut(s)	1605
SfaNI	GCATC	4 cut(s)	625, 678, 1418, 1759
SfcI	CTRYAG	2 cut(s)	693, 2041
SfuI	TTCGAA	2 cut(s)	151, 371
SgrAI	CRCCGGYG	1 cut(s)	37
SinI	GGWCC	1 cut(s)	970
SmiMI	CAYNNNNRTG	3 cut(s)	1154, 1230, 1997
SmlI	CTYRAG	1 cut(s)	2102
SmoI	CTYRAG	1 cut(s)	2102
SseBI	AGGCCT	2 cut(s)	878, 2039
SsiI	CCGC	1 cut(s)	884
SspI	AATATT	2 cut(s)	376, 1209
SspMI	CTAG	6 cut(s)	27, 312, 612, 1347, 1538, 1719
StuI	AGGCCT	2 cut(s)	878, 2039
StyD4I	CCNGG	4 cut(s)	278, 801, 1240, 2074
TaaI	ACNGT	6 cut(s)	934, 1053, 1136, 1524, 1889, 2027
TaiI	ACGT	1 cut(s)	1932
TaqI	TCGA	9 cut(s)	151, 207, 226, 261, 359, 371, 633, 1228, 1623
TatI	WGTACW	3 cut(s)	618, 1278, 1574
TfiI	GAWTC	7 cut(s)	295, 397, 1175, 1306, 1867, 1979, 2006
Tru1I	TTAA	9 cut(s)	392, 480, 524, 998, 1029, 1068, 1100, 1146, 1265
Tru9I	TTAA	9 cut(s)	392, 480, 524, 998, 1029, 1068, 1100, 1146, 1265
TscAI	CASTG	4 cut(s)	418, 508, 1894, 2164
TseFI	GTSAC	3 cut(s)	499, 913, 1910
TseI	GCWGC	3 cut(s)	1432, 2079, 2165
Tsp45I	GTSAC	3 cut(s)	499, 913, 1910
TspDTI	ATGAA	9 cut(s)	728, 783, 905, 938, 939, 1218, 1533, 1751, 1826
TspGWI	ACGGA	1 cut(s)	1602
TspRI	CASTG	4 cut(s)	418, 508, 1894, 2164
Tth111I	GACNNNGTC	1 cut(s)	1593
Van91I	CCANNNNNTGG	2 cut(s)	1247, 1399
VneI	GTGCAC	1 cut(s)	1601
VpaK11BI	GGWCC	1 cut(s)	970
VspI	ATTAAT	3 cut(s)	524, 1068, 1265
XagI	CCTNNNNNAGG	1 cut(s)	129
XapI	RAATTY	4 cut(s)	228, 582, 677, 1835
XmnI	GAANNNNTTC	3 cut(s)	232, 774, 1839
XspI	CTAG	6 cut(s)	27, 312, 612, 1347, 1538, 1719

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.