Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0012154

Physical Location & Seq

Genomic Coordinates Reverse (-)

20251450 .. 20254981

Gene Structure 3532 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g29230.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2025 bp

ATGAGATGGCTTTCTTCTTTAGCCTCTAGGGTCTCACCTGCACTCAGAACCCAAACCAAACCCAGGAAGCCTCTGTTGCCTTCTGCTCCTCACAAAGGTAATTCATTTCCAAGCAATCTTATTTCAGCTAAGAATCCCAAATTTCCTGTTATCGATCATCTCTACATTGCTCGAGTTCTTTCTCGAAAGGACTGGTTTTTGTTACTTGACCACGAGTTGAATGCCAGGAGGATCTTGTTGACCCCTCAGTCTGTTGCTAGTGTCTTGCAAAACCAAGAAAACCCATTGCACCCTTTGAAGTTTTCGATATGGTTTTCGAATGTTGAGCCCTTGTTCTTAAAGAATCAATCGGTTCGCGGTGTTTTGGCCAACACCCTTTTCAGGAAAGGCCCTGCTGTATTGTCTGTTGAATTTCTTAAAGATGTTAAGAATTCGGGTTTAAAGGTGACTGAAGATTTGCTTTGCATATTGATTGGTAGTTGGGGGAGGTTGGGTTTGGCAAAGTATTGTGCTGAGGTTTTTGGGCAAATTTCATTTTTGGGTCTTACTCTTAGCACTAGATTGTACAATGCTGTGATCAACGCGTTAGTCAAGTCCAATTCACTTGACTTGGCTTACTTGAAATTCCAACAGATGCCGGCCGATAATTGCCATCCTGATAGGTTCACTTACAATATCCTCATTCATGGAGTTTGCAAGATTGGTATTGTGGATGAAGCTGTTCGCTTAGTCAAGCAAATGGAGGGCTTGGGATATTTGCCGAATGTTCATACTTATACAAATTTGGTTGATGGGTTTTGTAAATCAAAAAGGGTTGACGAGGCCTTCAGGGTTATAAAGTTAATGAGGTATAAGAATGTGACTCCTAATGAAGCTACTGTCAGATCATTGGTTCATGGAGTGTTTCATTGCATGGACCCTGGTAAGGCTTTTGAGTTGTTATTGAGTTTCGTTGAAGGGGAGTCTCTCTTGTTTAAGGTAGCTTGTGATACCATACTCTATTGCCTTGCTAATAATCACATGTCAAGGGAGATTGCTTTGTTTTTAAAGAAATTTGGTGCGAAAGGTTATTTGCCTGACAGTTCAACATTTAACATCACAATGGTTTGTTTGACAAAGGAGTTGGCTCATGCTCAGAATGAGGTACATGAACTATTTGAAAATTACATCCAGGGAGGTGGAAAACCAGGATTTGGTACTTATCTTGTGTTAATTGAAGCCATGTACAAGTCTGGAAACATTGATGAGGGGAATCAAATCTTTGAGCAATTGGTAAAAGATGAACTTTTATCTAGTGTTCATTCATATAACATGGTAATTAATTGCTTTTGCAAAGCCCAAATTCTGGACAGGGCATCAAGAGCTTTTGGAGATATGCCGCATAATGGTATTCCTCCTACCCTTGTAACATTCAATACACTTCTTGCTGGATATTGCAAGGCTGGAGAGGTAAGCAAGGCACATGAACTGTTGATAATGCTCCTAGAACATGGTTTCAAACCGGATATATTCACTTTTAGTACAATAATTGACGGACTCTGTCGGGTGAACCAGATTGATGATGCTTTCGATTGTTTTTCTGAGATGGTCAGGTGGGGAATCACTCCAAATGTCATCACATACAATATACTGTTACGCTCTTTGTGTTTCATTGGAGATATTGCTAGAGCAGAGAGACTAATGGAAAATATGCAGGTAGATGGAATAAAACCAGATTCTTACTCTTTCAGTCATCTTATTCAAAGCTTTTGTAGGATGAACAAGGTTGAGAAAGCAGAGGAACACTTTCTTGTTATGTTGAAATCGGGTTTGAATCCTGACAATTATACATACAGTGTTTTTATCAAGGCATTGTGTGACTTGGGAAAACTTGATGTGGCAAAGGAGATATTTCTCTCCATGGAAGCATATGACTGTTTACCCAATTCTTCTCTTTGCAGTATAATGCTGGATTCTCTGATTCAGCATAACCGTTTTGAAGAGGCCTGTAGAATGGTGAAAAGTTTTGTCAGGAGGAAAAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006091 GO:0006119 GO:0006139 GO:0006163 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0006979 GO:0008150 GO:0008152 GO:0009117 GO:0009123 GO:0009126 GO:0009141 GO:0009144 GO:0009150 GO:0009161 GO:0009167 GO:0009199 GO:0009205 GO:0009259 GO:0009451 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0015980 GO:0016070 GO:0016310 GO:0016787 GO:0016788 GO:0017144 GO:0019637 GO:0019693 GO:0022900 GO:0022904 GO:0033993 GO:0034641 GO:0042221 GO:0042773 GO:0042775 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0045333 GO:0046034 GO:0046483 GO:0050896 GO:0055086 GO:0055114 GO:0071704 GO:0072521 GO:0090304 GO:0090305 GO:0097159 GO:0097305 GO:1901135 GO:1901360 GO:1901363 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

675

Amino Acids

76.07

Weight (kDa)

8.53

Isoelectric Point (pI)

32.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_long	PF17177	174 - 314	6.7e-12	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	188 - 233	5.6e-12	PPR repeat family
PPR_1	PF12854	216 - 248	1.4e-12	PPR repeat
PPR_2	PF13041	223 - 268	2e-13	PPR repeat family
PPR_1	PF12854	251 - 283	5.2e-10	PPR repeat
TPR_24	PF23276	254 - 300	5.7e-07	Fungal tetratrico peptide repeats
PPR_2	PF13041	254 - 301	4.6e-12	PPR repeat family
PPR	PF01535	258 - 287	6.9e-06	PPR repeat
PPR_2	PF13041	400 - 445	2.9e-06	PPR repeat family
PPR_long	PF17177	412 - 491	7.6e-06	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	420 - 478	1.6e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	432 - 475	4.9e-09	PPR repeat family
PPR_1	PF12854	462 - 491	1.7e-09	PPR repeat
PPR_2	PF13041	466 - 515	1.7e-15	PPR repeat family
PPR	PF01535	469 - 499	2.2e-06	PPR repeat
PPR_3	PF13812	497 - 546	1.9e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	498 - 530	9.3e-12	PPR repeat
PPR_2	PF13041	501 - 549	2e-19	PPR repeat family
PPR	PF01535	504 - 534	1.4e-06	PPR repeat
PPR_long	PF17177	517 - 623	1.2e-08	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	532 - 564	6.3e-09	PPR repeat
PPR_2	PF13041	538 - 585	5.4e-12	PPR repeat family
PPR_3	PF13812	559 - 618	1e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	567 - 594	6.8e-07	PPR repeat
PPR_2	PF13041	576 - 620	2.6e-12	PPR repeat family
PPR_1	PF12854	603 - 635	1.6e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012154)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16890 AT3G16890
fragaria_vesca	FvH4_5g29230
malus_domestica	MD00G1073300.v1.1
prunus_persica	Prupe.1G002300_v2.0.a1 Prupe.1G002300_v2.0.a1 Prupe.1G002300_v2.0.a1
pyrus_communis	pycom420g00330
rosa_chinensis	RchiOBHm_Chr7g0221991
rosa_laevigata	RLG00000002105
rosa_multiflora	Rmu_co8447505.1_g000001 Rmu_sc0004325.1_g000020
rosa_roxburghii	Rroxscaffold_3G00237520
rosa_rugosa	Rorug07G0204800
rosa_samantha	Rh7AG345400 Rh7BG335900 Rh7CG362900 Rh7DG343200
rosa_wichuraiana	Rw7G029280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	836
AarI	CACCTGC	1 cut(s)	46
AasI	GACNNNNNNGTC	1 cut(s)	247
Acc36I	ACCTGC	2 cut(s)	46, 1684
AccB7I	CCANNNNNTGG	2 cut(s)	1193, 1345
AccII	CGCG	2 cut(s)	357, 584
AciI	CCGC	2 cut(s)	357, 1379
AclWI	GGATC	1 cut(s)	239
AcoI	YGGCCR	2 cut(s)	366, 639
AcsI	RAATTY	8 cut(s)	140, 410, 430, 528, 623, 781, 1052, 1341
AcuI	CTGAAG	2 cut(s)	471, 811
AfaI	GTAC	5 cut(s)	566, 1146, 1198, 1226, 1522
AfiI	CCNNNNNNNGG	7 cut(s)	63, 95, 381, 925, 1193, 1345, 1385
AflIII	ACRYGT	2 cut(s)	582, 1020
AjnI	CCWGG	5 cut(s)	62, 224, 919, 1170, 1186
AjuI	GAANNNNNNNTTGG	2 cut(s)	362, 394
AluBI	AGCT	6 cut(s)	128, 719, 875, 983, 1364, 1746
AluI	AGCT	6 cut(s)	128, 719, 875, 983, 1364, 1746
Alw26I	GTCTC	3 cut(s)	37, 969, 1669
AlwI	GGATC	1 cut(s)	239
Ama87I	CYCGRG	1 cut(s)	171
AoxI	GGCC	5 cut(s)	366, 388, 639, 822, 1983
ApoI	RAATTY	8 cut(s)	140, 410, 430, 528, 623, 781, 1052, 1341
ArsI	GACNNNNNNTTYG	2 cut(s)	439, 471
AseI	ATTAAT	1 cut(s)	1320
Asp700I	GAANNNNTTC	2 cut(s)	720, 1785
AspS9I	GGNCC	2 cut(s)	389, 916
AsuHPI	GGTGA	4 cut(s)	27, 457, 1558, 2008
AsuII	TTCGAA	1 cut(s)	317
AvaI	CYCGRG	1 cut(s)	171
AvaII	GGWCC	1 cut(s)	916
BalI	TGGCCA	1 cut(s)	368
BanII	GRGCYC	1 cut(s)	330
BauI	CACGAG	1 cut(s)	212
BbvCI	CCTCAGC	1 cut(s)	513
BccI	CCATC	4 cut(s)	660, 785, 1579, 1694
BcgI	CGANNNNNNTGC	2 cut(s)	203, 237
BciT130I	CCWGG	5 cut(s)	64, 226, 921, 1172, 1188
BclI	TGATCA	1 cut(s)	576
BcoDI	GTCTC	3 cut(s)	37, 969, 1669
BfaI	CTAG	6 cut(s)	27, 258, 558, 1293, 1484, 1665
BfmI	CTRYAG	1 cut(s)	1987
BfuAI	ACCTGC	2 cut(s)	46, 1684
BisI	GCNGC	1 cut(s)	1379
BlsI	GCNGC	1 cut(s)	1380
Bme1390I	CCNGG	5 cut(s)	64, 226, 921, 1172, 1188
Bme18I	GGWCC	1 cut(s)	916
BmeT110I	CYCGRG	1 cut(s)	171
BmgT120I	GGNCC	2 cut(s)	389, 916
BmiI	GGNNCC	1 cut(s)	918
BmrFI	CCNGG	5 cut(s)	64, 226, 921, 1172, 1188
BmsI	GCATC	3 cut(s)	624, 1364, 1552
BpmI	CTGGAG	1 cut(s)	1464
Bpu10I	CCTNAGC	1 cut(s)	513
Bpu14I	TTCGAA	1 cut(s)	317
Bsa29I	ATCGAT	1 cut(s)	153
BsaI	GGTCTC	1 cut(s)	37
BsaJI	CCNNGG	4 cut(s)	62, 919, 1171, 1899
BsaWI	WCCGGW	1 cut(s)	1501
BsaXI	ACNNNNNCTCC	2 cut(s)	478, 508
Bsc4I	CCNNNNNNNGG	7 cut(s)	63, 95, 381, 925, 1193, 1345, 1385
Bse118I	RCCGGY	1 cut(s)	637
Bse1I	ACTGG	1 cut(s)	197
Bse3DI	GCAATG	3 cut(s)	165, 284, 907
BseBI	CCWGG	5 cut(s)	64, 226, 921, 1172, 1188
BseCI	ATCGAT	1 cut(s)	153
BseDI	CCNNGG	4 cut(s)	62, 919, 1171, 1899
BseGI	GGATG	4 cut(s)	652, 718, 1167, 1761
BseLI	CCNNNNNNNGG	7 cut(s)	63, 95, 381, 925, 1193, 1345, 1385
BseMI	GCAATG	3 cut(s)	165, 284, 907
BseMII	CTCAG	5 cut(s)	58, 260, 504, 1148, 1572
BseNI	ACTGG	1 cut(s)	197
BseRI	GAGGAG	1 cut(s)	78
BseX3I	CGGCCG	1 cut(s)	639
BsgI	GTGCAG	1 cut(s)	24
Bsh1236I	CGCG	2 cut(s)	357, 584
Bsh1285I	CGRYCG	1 cut(s)	642
BshFI	GGCC	5 cut(s)	368, 390, 641, 824, 1985
BshVI	ATCGAT	1 cut(s)	153
BsiEI	CGRYCG	1 cut(s)	642
BsiHKCI	CYCGRG	1 cut(s)	171
BsiSI	CCGG	2 cut(s)	638, 1502
BslI	CCNNNNNNNGG	7 cut(s)	63, 95, 381, 925, 1193, 1345, 1385
BsmAI	GTCTC	3 cut(s)	37, 969, 1669
BsmI	GAATGC	1 cut(s)	226
BsnI	GGCC	5 cut(s)	368, 390, 641, 824, 1985
Bso31I	GGTCTC	1 cut(s)	37
BsoBI	CYCGRG	1 cut(s)	171
Bsp119I	TTCGAA	1 cut(s)	317
Bsp1286I	GDGCHC	1 cut(s)	330
Bsp1407I	TGTACA	2 cut(s)	564, 1224
Bsp143I	GATC	4 cut(s)	154, 231, 576, 884
Bsp19I	CCATGG	1 cut(s)	1899
BspACI	CCGC	2 cut(s)	357, 1379
BspANI	GGCC	5 cut(s)	368, 390, 641, 824, 1985
BspCNI	CTCAG	5 cut(s)	57, 259, 505, 1147, 1573
BspDI	ATCGAT	1 cut(s)	153
BspFNI	CGCG	2 cut(s)	357, 584
BspLI	GGNNCC	1 cut(s)	918
BspMI	ACCTGC	2 cut(s)	46, 1684
BspPI	GGATC	1 cut(s)	239
BspT104I	TTCGAA	1 cut(s)	317
BspTNI	GGTCTC	1 cut(s)	37
BsrDI	GCAATG	3 cut(s)	165, 284, 907
BsrFI	RCCGGY	1 cut(s)	637
BsrGI	TGTACA	2 cut(s)	564, 1224
BsrI	ACTGG	1 cut(s)	197
BssAI	RCCGGY	1 cut(s)	637
BssECI	CCNNGG	4 cut(s)	62, 919, 1171, 1899
BssMI	GATC	4 cut(s)	154, 231, 576, 884
BssSI	CACGAG	1 cut(s)	212
BssT1I	CCWWGG	1 cut(s)	1899
Bst2BI	CACGAG	1 cut(s)	212
Bst2UI	CCWGG	5 cut(s)	64, 226, 921, 1172, 1188
Bst4CI	ACNGT	7 cut(s)	880, 1082, 1470, 1632, 1835, 1916, 1973
Bst6I	CTCTTC	1 cut(s)	1974
BstAUI	TGTACA	2 cut(s)	564, 1224
BstBI	TTCGAA	1 cut(s)	317
BstC8I	GCNNGC	1 cut(s)	639
BstDEI	CTNAG	8 cut(s)	44, 129, 246, 513, 551, 727, 1134, 1581
BstDSI	CCRYGG	1 cut(s)	1899
BstENI	CCTNNNNNAGG	1 cut(s)	93
BstF5I	GGATG	4 cut(s)	652, 718, 1167, 1761
BstFNI	CGCG	2 cut(s)	357, 584
BstKTI	GATC	4 cut(s)	157, 234, 579, 887
BstMAI	GTCTC	3 cut(s)	37, 969, 1669
BstMBI	GATC	4 cut(s)	154, 231, 576, 884
BstMCI	CGRYCG	1 cut(s)	642
BstMWI	GCNNNNNNNGC	2 cut(s)	76, 1361
BstNI	CCWGG	5 cut(s)	64, 226, 921, 1172, 1188
BstNSI	RCATGY	1 cut(s)	1024
BstSCI	CCNGG	5 cut(s)	62, 224, 919, 1170, 1186
BstSFI	CTRYAG	1 cut(s)	1987
BstUI	CGCG	2 cut(s)	357, 584
BstX2I	RGATCY	1 cut(s)	231
BstXI	CCANNNNNNTGG	1 cut(s)	1178
BstYI	RGATCY	1 cut(s)	231
BstZI	CGGCCG	1 cut(s)	639
Bsu15I	ATCGAT	1 cut(s)	153
BsuRI	GGCC	5 cut(s)	368, 390, 641, 824, 1985
BsuTUI	ATCGAT	1 cut(s)	153
BtgI	CCRYGG	1 cut(s)	1899
BtsCI	GGATG	4 cut(s)	652, 718, 1167, 1761
BtsIMutI	CAGTG	1 cut(s)	1840
BveI	ACCTGC	2 cut(s)	46, 1684
Cac8I	GCNNGC	1 cut(s)	639
Cfr10I	RCCGGY	1 cut(s)	637
Cfr13I	GGNCC	2 cut(s)	389, 916
ClaI	ATCGAT	1 cut(s)	153
Csp6I	GTAC	5 cut(s)	565, 1145, 1197, 1225, 1521
CviQI	GTAC	5 cut(s)	565, 1145, 1197, 1225, 1521
DdeI	CTNAG	8 cut(s)	44, 129, 246, 513, 551, 727, 1134, 1581
DpnI	GATC	4 cut(s)	156, 233, 578, 886
DpnII	GATC	4 cut(s)	154, 231, 576, 884
DraI	TTTAAA	2 cut(s)	441, 1047
DrdI	GACNNNNNNGTC	1 cut(s)	247
DseDI	GACNNNNNNGTC	1 cut(s)	247
EaeI	YGGCCR	2 cut(s)	366, 639
EagI	CGGCCG	1 cut(s)	639
Eam1104I	CTCTTC	1 cut(s)	1974
EarI	CTCTTC	1 cut(s)	1974
EclXI	CGGCCG	1 cut(s)	639
Eco130I	CCWWGG	1 cut(s)	1899
Eco147I	AGGCCT	2 cut(s)	824, 1985
Eco24I	GRGCYC	1 cut(s)	330
Eco31I	GGTCTC	1 cut(s)	37
Eco47I	GGWCC	1 cut(s)	916
Eco52I	CGGCCG	1 cut(s)	639
Eco57I	CTGAAG	2 cut(s)	471, 811
Eco88I	CYCGRG	1 cut(s)	171
EcoNI	CCTNNNNNAGG	1 cut(s)	93
EcoO109I	RGGNCCY	1 cut(s)	389
EcoRI	GAATTC	1 cut(s)	430
EcoRII	CCWGG	5 cut(s)	62, 224, 919, 1170, 1186
EcoT14I	CCWWGG	1 cut(s)	1899
EcoT38I	GRGCYC	1 cut(s)	330
ErhI	CCWWGG	1 cut(s)	1899
FalI	AAGNNNNNCTT	4 cut(s)	444, 476, 1269, 1301
FauNDI	CATATG	1 cut(s)	1909
FbaI	TGATCA	1 cut(s)	576
Fnu4HI	GCNGC	1 cut(s)	1379
FokI	GGATG	4 cut(s)	639, 725, 1154, 1768
FriOI	GRGCYC	1 cut(s)	330
Fsp4HI	GCNGC	1 cut(s)	1379
FspBI	CTAG	6 cut(s)	27, 258, 558, 1293, 1484, 1665
GluI	GCNGC	1 cut(s)	1379
GsuI	CTGGAG	1 cut(s)	1464
HaeIII	GGCC	5 cut(s)	368, 390, 641, 824, 1985
HapII	CCGG	2 cut(s)	638, 1502
HincII	GTYRAC	2 cut(s)	240, 817
HindII	GTYRAC	2 cut(s)	240, 817
HindIII	AAGCTT	1 cut(s)	1744
HpaII	CCGG	2 cut(s)	638, 1502
HphI	GGTGA	4 cut(s)	27, 457, 1558, 2008
Hpy166II	GTNNAC	5 cut(s)	240, 666, 817, 1549, 1919
Hpy188I	TCNGA	5 cut(s)	47, 884, 1137, 1582, 1959
Hpy188III	TCNNGA	8 cut(s)	183, 382, 656, 1233, 1346, 1359, 1817, 2011
Hpy8I	GTNNAC	5 cut(s)	240, 666, 817, 1549, 1919
HpyAV	CCTTC	3 cut(s)	90, 835, 950
HpyCH4III	ACNGT	7 cut(s)	880, 1082, 1470, 1632, 1835, 1916, 1973
HpyF10VI	GCNNNNNNNGC	2 cut(s)	76, 1361
HpyF3I	CTNAG	8 cut(s)	44, 129, 246, 513, 551, 727, 1134, 1581
KroI	GCCGGC	1 cut(s)	637
KroNI	GCCGGC	1 cut(s)	639
Ksp22I	TGATCA	1 cut(s)	576
Kzo9I	GATC	4 cut(s)	154, 231, 576, 884
LmnI	GCTCC	2 cut(s)	91, 1485
LweI	GCATC	3 cut(s)	624, 1364, 1552
MaeI	CTAG	6 cut(s)	27, 258, 558, 1293, 1484, 1665
MaeIII	GTNAC	6 cut(s)	201, 445, 859, 1405, 1632, 1856
MalI	GATC	4 cut(s)	156, 233, 578, 886
MboI	GATC	4 cut(s)	154, 231, 576, 884
MboII	GAAGA	4 cut(s)	6, 464, 1920, 1991
MfeI	CAATTG	1 cut(s)	1268
MflI	RGATCY	1 cut(s)	231
MhlI	GDGCHC	1 cut(s)	330
MlsI	TGGCCA	1 cut(s)	368
MluI	ACGCGT	1 cut(s)	582
MluNI	TGGCCA	1 cut(s)	368
MlyI	GAGTC	3 cut(s)	856, 971, 1530
MmeI	TCCRAC	1 cut(s)	652
Mox20I	TGGCCA	1 cut(s)	368
MroNI	GCCGGC	1 cut(s)	637
MroXI	GAANNNNTTC	2 cut(s)	720, 1785
MscI	TGGCCA	1 cut(s)	368
MslI	CAYNNNNRTG	1 cut(s)	1100
Msp20I	TGGCCA	1 cut(s)	368
MspI	CCGG	2 cut(s)	638, 1502
MspR9I	CCNGG	5 cut(s)	64, 226, 921, 1172, 1188
MunI	CAATTG	1 cut(s)	1268
Mva1269I	GAATGC	1 cut(s)	226
MvaI	CCWGG	5 cut(s)	64, 226, 921, 1172, 1188
MvnI	CGCG	2 cut(s)	357, 584
MwoI	GCNNNNNNNGC	2 cut(s)	76, 1361
NaeI	GCCGGC	1 cut(s)	639
NcoI	CCATGG	1 cut(s)	1899
NdeI	CATATG	1 cut(s)	1909
NdeII	GATC	4 cut(s)	154, 231, 576, 884
NgoMIV	GCCGGC	1 cut(s)	637
NlaIV	GGNNCC	1 cut(s)	918
NmuCI	GTSAC	3 cut(s)	445, 859, 1856
NspI	RCATGY	1 cut(s)	1024
NspV	TTCGAA	1 cut(s)	317
PaeR7I	CTCGAG	1 cut(s)	171
PaqCI	CACCTGC	1 cut(s)	46
PceI	AGGCCT	2 cut(s)	824, 1985
PciI	ACATGT	1 cut(s)	1020
PctI	GAATGC	1 cut(s)	226
PdiI	GCCGGC	1 cut(s)	639
PdmI	GAANNNNTTC	2 cut(s)	720, 1785
PfeI	GAWTC	8 cut(s)	133, 343, 1252, 1599, 1715, 1813, 1952, 1960
PflFI	GACNNNGTC	1 cut(s)	1539
PflMI	CCANNNNNTGG	2 cut(s)	1193, 1345
PkrI	GCNGC	1 cut(s)	1380
PleI	GAGTC	3 cut(s)	856, 970, 1530
PpsI	GAGTC	3 cut(s)	856, 970, 1530
PscI	ACATGT	1 cut(s)	1020
PshBI	ATTAAT	1 cut(s)	1320
PsiI	TTATAA	1 cut(s)	836
Psp6I	CCWGG	5 cut(s)	62, 224, 919, 1170, 1186
PspGI	CCWGG	5 cut(s)	62, 224, 919, 1170, 1186
PspN4I	GGNNCC	1 cut(s)	918
PspPI	GGNCC	2 cut(s)	389, 916
PspXI	VCTCGAGB	1 cut(s)	171
PsuI	RGATCY	1 cut(s)	231
PsyI	GACNNNGTC	1 cut(s)	1539
RsaI	GTAC	5 cut(s)	566, 1146, 1198, 1226, 1522
RsaNI	GTAC	5 cut(s)	565, 1145, 1197, 1225, 1521
RseI	CAYNNNNRTG	1 cut(s)	1100
SatI	GCNGC	1 cut(s)	1379
Sau3AI	GATC	4 cut(s)	154, 231, 576, 884
Sau96I	GGNCC	2 cut(s)	389, 916
SchI	GAGTC	3 cut(s)	856, 971, 1530
ScrFI	CCNGG	5 cut(s)	64, 226, 921, 1172, 1188
SduI	GDGCHC	1 cut(s)	330
SfaNI	GCATC	3 cut(s)	624, 1364, 1552
SfcI	CTRYAG	1 cut(s)	1987
Sfr274I	CTCGAG	1 cut(s)	171
SfuI	TTCGAA	1 cut(s)	317
SinI	GGWCC	1 cut(s)	916
SlaI	CTCGAG	1 cut(s)	171
SmiMI	CAYNNNNRTG	1 cut(s)	1100
SmlI	CTYRAG	1 cut(s)	171
SmoI	CTYRAG	1 cut(s)	171
SseBI	AGGCCT	2 cut(s)	824, 1985
SsiI	CCGC	2 cut(s)	357, 1379
SspMI	CTAG	6 cut(s)	27, 258, 558, 1293, 1484, 1665
StuI	AGGCCT	2 cut(s)	824, 1985
StyD4I	CCNGG	5 cut(s)	62, 224, 919, 1170, 1186
StyI	CCWWGG	1 cut(s)	1899
TaaI	ACNGT	7 cut(s)	880, 1082, 1470, 1632, 1835, 1916, 1973
TaqI	TCGA	6 cut(s)	153, 172, 184, 305, 317, 1569
TatI	WGTACW	3 cut(s)	564, 1224, 1520
TauI	GCSGC	1 cut(s)	1381
TfiI	GAWTC	8 cut(s)	133, 343, 1252, 1599, 1715, 1813, 1952, 1960
TscAI	CASTG	1 cut(s)	1840
TseFI	GTSAC	3 cut(s)	445, 859, 1856
Tsp45I	GTSAC	3 cut(s)	445, 859, 1856
TspGWI	ACGGA	1 cut(s)	1548
TspRI	CASTG	1 cut(s)	1840
Tth111I	GACNNNGTC	1 cut(s)	1539
Van91I	CCANNNNNTGG	2 cut(s)	1193, 1345
VpaK11BI	GGWCC	1 cut(s)	916
VspI	ATTAAT	1 cut(s)	1320
XagI	CCTNNNNNAGG	1 cut(s)	93
XapI	RAATTY	8 cut(s)	140, 410, 430, 528, 623, 781, 1052, 1341
XceI	RCATGY	1 cut(s)	1024
XhoI	CTCGAG	1 cut(s)	171
XmnI	GAANNNNTTC	2 cut(s)	720, 1785
XspI	CTAG	6 cut(s)	27, 258, 558, 1293, 1484, 1665

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.