Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0012154

Physical Location & Seq

Genomic Coordinates Reverse (-)

43067928 .. 43072526

Gene Structure 4599 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ19864

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2067 bp

ATGAGATGGCTTTCTTCTTTAGCCTCTAGGGTCTCACCGGCACTCAGAACCCTCCCTCACAAACCCTCGCCTTCATCAAAAATCAAACCCAGCAAGCCTCTGCCTTCTGCTCCTCACAAAGGTAATTACTTTGAGCTTCGAAACAATCTCATTTCAGCTAAGAATACCAATTTTCGTGTTGCTAATAAACCAATCGACCACCTCTACATTGCTCGAATTCTTTCTCGCAAGGACTGGTTTTTGTTACTCGACCACGAGTTGAATGCCAGGAGGATCGTTTTGAATCCTCAGGCCGTTGCTAGTGTCTTGCAAAACCAAGAAAACCCATTGCACCCTTTCAAGTTTTCGATATGGGTTTCGAATATTGATCCCTTGTTCTTAAAGAATCAATCGGTTCGCAGTGTTTTAGCCAACACTCTTTTCAGGAAAGGCCCAGTTGTGTTGTCTGTTGAATTGCTAAAAGATATTAACAACTCAGGTTTGAAGGTCACTGAAGATTTGCTTTGCATATTAATTGGTAGTTGGGGGAGGTTGGGTTTGGCAAAGTATTGTGCTGAGGTTTTTGGGCAAATTTCGTTTTTGGGTCTTGGTCTTAGCACTAGGTTGTACAATGCTGTGATCGATGCCTTAGTCAAGTCCAATTCACTTGACTTGGCTTATTTGAAATTCCAACAGATGCCTGCAGATAATTGCTATCCTGATAGGTTCACTTACAATATCCTCATTCATGGAGTTTGCAAGATTGGTATTGTGGATGAAGCTCTCCGCTTAGTCAAGCAAATGGAGGGCTTGGGATACTTGCCTAATGTTCGTACTTATACAATTCTGGTTGATGGGTTTTGTAATTCAAGGAGGGTTGATGAGGCCTTTGGGGTTATGAAGATAATGAGGGATAAGAATGTGACTCCTAATGAAGCTACTGTCAGATCATTGGTTCATGGGGTGTTTCGTTGCATGGACCCCAGTAAGGCTTTTGAGTTGTTATTAAGTTTTGTTGAAAGGGAGTCTCTCTTGTTTAAGGTAGCTTGTGATACCATACTGTATTGCCTTTCAATTAACCACATGGCAAGGGAGATTGCTGTGTTTTTAAAGAAATCTGGTGCGAAAGGTTATTTGCCTGACAGTTCAACATTTAACGTTGCAATGGTTTGTTTGACAAAGGAATCAGCTCATCCTCGGGATGATGTACATGATATATTTGAAAGTTTTATACATCGAGGTGGAAAACCAGGATTTGGTTCTTATCTTGCATTAATTGAAGCTATGTACAAGTCTGGAAACGTTGATGAGGGGAATCAAATCTTTGAGCAAATGACCAAGGATGGACTTGTATCTAGTGTCTTCTCATATAACATGGTAATTGATTGCTTTTGCAAAGCCCAAATTATGGACATGGCATCAAAGGCTTTTGGAGATATGCAGCAGAAAGGTATTCCTCCTAACCTTGTAACATTCAATACACTTCTTACTGGATATTGCAAGGCTGGAGAGGTAAGTAAGGCACATGAACTGTTGATAATGCTCCTACAACATGGTTTCAAACCAGATATATTCACTTTTAGTACAATAATTGACGGACTCTGTCGGGTGCACCAGATTGATGACGCTTTCGATTGTTTTGCTGAGATGGTCAGGTGGGGGATCACTCCAAATGTCATCACATACAATATATTGTTACGCTCTTTGTGTTTCGTCGGAGATATTGCTAGAGGAGTGCGACTAATGAAAAGTATGCAGGTAGATGGAATAAAACCAGATACTTACTCTTTCAGTTATCTTATTCAAAGTCTTTGTAGGATGAACAAGGTTGAGAAAGCAGAGGAATTTTTTCTTGCTATGTTGAGATCAGGTTTGAATCCTGACAATTATACATACAGTGTTTTTATCAAGGCATTGTGTGACTTGGGAAGACTTGACGTGGCAAAGGAGATATTCCTCTCTATGGAAGCATATGATTATTTACCCGATTCTTCTATTTGCAATGTAATGTTGGATTCTCTGGTTCAGCATAACCGTTTTGAAGAGGCCTGTAGAATAGTAAAAAGTTTTGTCAGGAGGAAAAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006091 GO:0006119 GO:0006139 GO:0006163 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0006979 GO:0008150 GO:0008152 GO:0009117 GO:0009123 GO:0009126 GO:0009141 GO:0009144 GO:0009150 GO:0009161 GO:0009167 GO:0009199 GO:0009205 GO:0009259 GO:0009451 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0015980 GO:0016070 GO:0016310 GO:0016787 GO:0016788 GO:0017144 GO:0019637 GO:0019693 GO:0022900 GO:0022904 GO:0033993 GO:0034641 GO:0042221 GO:0042773 GO:0042775 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0045333 GO:0046034 GO:0046483 GO:0050896 GO:0055086 GO:0055114 GO:0071704 GO:0072521 GO:0090304 GO:0090305 GO:0097159 GO:0097305 GO:1901135 GO:1901360 GO:1901363 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

688

Amino Acids

77.63

Weight (kDa)

8.79

Isoelectric Point (pI)

33.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_long	PF17177	196 - 331	2.6e-12	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	202 - 247	1.6e-11	PPR repeat family
PPR_1	PF12854	230 - 262	1e-11	PPR repeat
PPR_2	PF13041	237 - 282	3.4e-14	PPR repeat family
PPR_1	PF12854	265 - 297	2.4e-10	PPR repeat
TPR_24	PF23276	272 - 319	2.5e-06	Fungal tetratrico peptide repeats
PPR_2	PF13041	276 - 315	2.9e-07	PPR repeat family
PPR_2	PF13041	414 - 459	1.6e-08	PPR repeat family
PPR_long	PF17177	426 - 511	2.2e-08	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	446 - 494	5.4e-15	PPR repeat family
TPR_24	PF23276	459 - 577	1.1e-07	Fungal tetratrico peptide repeats
PPR_3	PF13812	471 - 524	2.4e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	476 - 505	1.4e-10	PPR repeat
PPR_2	PF13041	480 - 529	3.6e-16	PPR repeat family
PPR	PF01535	483 - 513	3.3e-06	PPR repeat
PPR_3	PF13812	510 - 560	9.8e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	512 - 544	6.8e-10	PPR repeat
PPR_2	PF13041	522 - 563	3.6e-15	PPR repeat family
PPR_long	PF17177	531 - 638	5.4e-08	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	546 - 578	4.5e-07	PPR repeat
PPR_2	PF13041	550 - 599	5.7e-13	PPR repeat family
PPR_1	PF12854	581 - 610	1.4e-07	PPR repeat
PPR_2	PF13041	593 - 634	3.8e-12	PPR repeat family
PPR_1	PF12854	617 - 649	8.7e-07	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012154)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16890 AT3G16890
fragaria_vesca	FvH4_5g29230
malus_domestica	MD00G1073300.v1.1
prunus_persica	Prupe.1G002300_v2.0.a1 Prupe.1G002300_v2.0.a1 Prupe.1G002300_v2.0.a1
pyrus_communis	pycom420g00330
rosa_chinensis	RchiOBHm_Chr7g0221991
rosa_laevigata	RLG00000002105
rosa_multiflora	Rmu_co8447505.1_g000001 Rmu_sc0004325.1_g000020
rosa_roxburghii	Rroxscaffold_3G00237520
rosa_rugosa	Rorug07G0204800
rosa_samantha	Rh7AG345400 Rh7BG335900 Rh7CG362900 Rh7DG343200
rosa_wichuraiana	Rw7G029280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1726
AccB7I	CCANNNNNTGG	2 cut(s)	1235, 1387
AciI	CCGC	1 cut(s)	766
AclI	AACGTT	2 cut(s)	1137, 1281
AclWI	GGATC	3 cut(s)	281, 362, 1649
AcsI	RAATTY	4 cut(s)	216, 570, 665, 1823
AcuI	CTGAAG	1 cut(s)	513
AfaI	GTAC	5 cut(s)	608, 814, 1188, 1268, 1564
AfiI	CCNNNNNNNGG	5 cut(s)	119, 967, 1235, 1387, 1942
AjiI	CACGTC	1 cut(s)	1918
AjnI	CCWGG	2 cut(s)	266, 1228
AjuI	GAANNNNNNNTTGG	2 cut(s)	404, 436
AluBI	AGCT	7 cut(s)	136, 158, 761, 917, 1025, 1169, 1262
AluI	AGCT	7 cut(s)	136, 158, 761, 917, 1025, 1169, 1262
Alw21I	GWGCWC	1 cut(s)	1593
Alw26I	GTCTC	2 cut(s)	37, 1011
Alw44I	GTGCAC	1 cut(s)	1589
AlwI	GGATC	3 cut(s)	281, 362, 1649
Ama87I	CYCGRG	1 cut(s)	1176
AoxI	GGCC	4 cut(s)	291, 430, 864, 2025
ApaLI	GTGCAC	1 cut(s)	1589
ApeKI	GCWGC	1 cut(s)	1420
ApoI	RAATTY	4 cut(s)	216, 570, 665, 1823
AseI	ATTAAT	2 cut(s)	512, 1253
Asp700I	GAANNNNTTC	2 cut(s)	220, 1827
AspS9I	GGNCC	2 cut(s)	431, 958
AsuHPI	GGTGA	1 cut(s)	27
AsuII	TTCGAA	2 cut(s)	139, 359
AvaI	CYCGRG	1 cut(s)	1176
AvaII	GGWCC	1 cut(s)	958
AxyI	CCTNAGG	1 cut(s)	288
BaeGI	GKGCMC	1 cut(s)	1593
BauI	CACGAG	1 cut(s)	254
BbsI	GAAGAC	2 cut(s)	1333, 1915
Bbv12I	GWGCWC	1 cut(s)	1593
BbvCI	CCTCAGC	1 cut(s)	555
BbvI	GCAGC	1 cut(s)	1432
BccI	CCATC	4 cut(s)	827, 1316, 1621, 1736
BceAI	ACGGC	1 cut(s)	278
BcgI	CGANNNNNNTGC	4 cut(s)	245, 279, 1601, 1635
BciT130I	CCWGG	2 cut(s)	268, 1230
BciVI	GTATCC	1 cut(s)	788
BcoDI	GTCTC	2 cut(s)	37, 1011
BfaI	CTAG	5 cut(s)	27, 300, 600, 1335, 1707
BfmI	CTRYAG	2 cut(s)	681, 2029
BfuAI	ACCTGC	1 cut(s)	1726
BfuI	GTATCC	1 cut(s)	788
BisI	GCNGC	1 cut(s)	1421
BlsI	GCNGC	1 cut(s)	1422
Bme1390I	CCNGG	2 cut(s)	268, 1230
Bme18I	GGWCC	1 cut(s)	958
BmeT110I	CYCGRG	1 cut(s)	1176
BmgBI	CACGTC	1 cut(s)	1918
BmgT120I	GGNCC	2 cut(s)	431, 958
BmiI	GGNNCC	1 cut(s)	960
BmrFI	CCNGG	2 cut(s)	268, 1230
BmrI	ACTGGG	2 cut(s)	428, 957
BmsI	GCATC	3 cut(s)	613, 666, 1406
BmuI	ACTGGG	2 cut(s)	428, 957
BpiI	GAAGAC	2 cut(s)	1333, 1915
BpmI	CTGGAG	1 cut(s)	1506
Bpu10I	CCTNAGC	1 cut(s)	555
Bpu14I	TTCGAA	2 cut(s)	139, 359
Bsa29I	ATCGAT	1 cut(s)	621
BsaI	GGTCTC	1 cut(s)	37
BsaJI	CCNNGG	2 cut(s)	1175, 1317
BsaXI	ACNNNNNCTCC	2 cut(s)	520, 550
Bsc4I	CCNNNNNNNGG	5 cut(s)	119, 967, 1235, 1387, 1942
Bse118I	RCCGGY	1 cut(s)	37
Bse1I	ACTGG	4 cut(s)	239, 434, 963, 1474
Bse21I	CCTNAGG	1 cut(s)	288
Bse3DI	GCAATG	4 cut(s)	207, 326, 1149, 1987
BseBI	CCWGG	2 cut(s)	268, 1230
BseCI	ATCGAT	1 cut(s)	621
BseDI	CCNNGG	2 cut(s)	1175, 1317
BseGI	GGATG	5 cut(s)	760, 1171, 1186, 1327, 1803
BseLI	CCNNNNNNNGG	5 cut(s)	119, 967, 1235, 1387, 1942
BseMI	GCAATG	4 cut(s)	207, 326, 1149, 1987
BseMII	CTCAG	5 cut(s)	58, 302, 489, 546, 1614
BseNI	ACTGG	4 cut(s)	239, 434, 963, 1474
BseRI	GAGGAG	2 cut(s)	102, 1725
BseSI	GKGCMC	1 cut(s)	1593
BseXI	GCAGC	1 cut(s)	1432
BseYI	CCCAGC	1 cut(s)	89
BshFI	GGCC	4 cut(s)	293, 432, 866, 2027
BshVI	ATCGAT	1 cut(s)	621
BsiHKAI	GWGCWC	1 cut(s)	1593
BsiHKCI	CYCGRG	1 cut(s)	1176
BsiSI	CCGG	1 cut(s)	38
BslI	CCNNNNNNNGG	5 cut(s)	119, 967, 1235, 1387, 1942
BsmAI	GTCTC	2 cut(s)	37, 1011
BsmI	GAATGC	1 cut(s)	268
BsnI	GGCC	4 cut(s)	293, 432, 866, 2027
Bso31I	GGTCTC	1 cut(s)	37
BsoBI	CYCGRG	1 cut(s)	1176
Bsp119I	TTCGAA	2 cut(s)	139, 359
Bsp1286I	GDGCHC	1 cut(s)	1593
Bsp1407I	TGTACA	3 cut(s)	606, 1186, 1266
Bsp143I	GATC	6 cut(s)	273, 367, 618, 926, 1641, 1844
BspACI	CCGC	1 cut(s)	766
BspANI	GGCC	4 cut(s)	293, 432, 866, 2027
BspCNI	CTCAG	5 cut(s)	57, 301, 488, 547, 1615
BspDI	ATCGAT	1 cut(s)	621
BspLI	GGNNCC	1 cut(s)	960
BspMAI	CTGCAG	1 cut(s)	685
BspMI	ACCTGC	1 cut(s)	1726
BspPI	GGATC	3 cut(s)	281, 362, 1649
BspT104I	TTCGAA	2 cut(s)	139, 359
BspTNI	GGTCTC	1 cut(s)	37
BsrDI	GCAATG	4 cut(s)	207, 326, 1149, 1987
BsrFI	RCCGGY	1 cut(s)	37
BsrGI	TGTACA	3 cut(s)	606, 1186, 1266
BsrI	ACTGG	4 cut(s)	239, 434, 963, 1474
BssAI	RCCGGY	1 cut(s)	37
BssECI	CCNNGG	2 cut(s)	1175, 1317
BssMI	GATC	6 cut(s)	273, 367, 618, 926, 1641, 1844
BssSI	CACGAG	1 cut(s)	254
BssT1I	CCWWGG	1 cut(s)	1317
Bst2BI	CACGAG	1 cut(s)	254
Bst2UI	CCWGG	2 cut(s)	268, 1230
Bst4CI	ACNGT	6 cut(s)	922, 1041, 1124, 1512, 1877, 2015
Bst6I	CTCTTC	1 cut(s)	2016
BstAUI	TGTACA	3 cut(s)	606, 1186, 1266
BstBI	TTCGAA	2 cut(s)	139, 359
BstC8I	GCNNGC	2 cut(s)	95, 681
BstDEI	CTNAG	9 cut(s)	44, 159, 288, 475, 555, 593, 628, 769, 1623
BstENI	CCTNNNNNAGG	1 cut(s)	117
BstF5I	GGATG	5 cut(s)	760, 1171, 1186, 1327, 1803
BstKTI	GATC	6 cut(s)	276, 370, 621, 929, 1644, 1847
BstMAI	GTCTC	2 cut(s)	37, 1011
BstMBI	GATC	6 cut(s)	273, 367, 618, 926, 1641, 1844
BstMWI	GCNNNNNNNGC	1 cut(s)	1403
BstNI	CCWGG	2 cut(s)	268, 1230
BstSCI	CCNGG	2 cut(s)	266, 1228
BstSFI	CTRYAG	2 cut(s)	681, 2029
BstSLI	GKGCMC	1 cut(s)	1593
BstV1I	GCAGC	1 cut(s)	1432
BstV2I	GAAGAC	2 cut(s)	1333, 1915
Bsu15I	ATCGAT	1 cut(s)	621
Bsu36I	CCTNAGG	1 cut(s)	288
BsuI	GTATCC	1 cut(s)	788
BsuRI	GGCC	4 cut(s)	293, 432, 866, 2027
BsuTUI	ATCGAT	1 cut(s)	621
BtrI	CACGTC	1 cut(s)	1918
BtsCI	GGATG	5 cut(s)	760, 1171, 1186, 1327, 1803
BtsI	GCAGTG	1 cut(s)	406
BtsIMutI	CAGTG	3 cut(s)	406, 489, 1882
BveI	ACCTGC	1 cut(s)	1726
Cac8I	GCNNGC	2 cut(s)	95, 681
Cfr10I	RCCGGY	1 cut(s)	37
Cfr13I	GGNCC	2 cut(s)	431, 958
ClaI	ATCGAT	1 cut(s)	621
CseI	GACGC	1 cut(s)	1613
Csp6I	GTAC	5 cut(s)	607, 813, 1187, 1267, 1563
CviAII	CATG	9 cut(s)	728, 938, 955, 1063, 1190, 1354, 1393, 1505, 1532
CviQI	GTAC	5 cut(s)	607, 813, 1187, 1267, 1563
DdeI	CTNAG	9 cut(s)	44, 159, 288, 475, 555, 593, 628, 769, 1623
DpnI	GATC	6 cut(s)	275, 369, 620, 928, 1643, 1846
DpnII	GATC	6 cut(s)	273, 367, 618, 926, 1641, 1844
DraI	TTTAAA	1 cut(s)	1089
Eam1104I	CTCTTC	1 cut(s)	2016
EarI	CTCTTC	1 cut(s)	2016
Eco130I	CCWWGG	1 cut(s)	1317
Eco147I	AGGCCT	2 cut(s)	866, 2027
Eco31I	GGTCTC	1 cut(s)	37
Eco47I	GGWCC	1 cut(s)	958
Eco57I	CTGAAG	1 cut(s)	513
Eco81I	CCTNAGG	1 cut(s)	288
Eco88I	CYCGRG	1 cut(s)	1176
EcoNI	CCTNNNNNAGG	1 cut(s)	117
EcoRI	GAATTC	1 cut(s)	216
EcoRII	CCWGG	2 cut(s)	266, 1228
EcoT14I	CCWWGG	1 cut(s)	1317
ErhI	CCWWGG	1 cut(s)	1317
FaeI	CATG	9 cut(s)	731, 941, 958, 1066, 1193, 1357, 1396, 1508, 1535
FalI	AAGNNNNNCTT	2 cut(s)	486, 518
FatI	CATG	9 cut(s)	727, 937, 954, 1062, 1189, 1353, 1392, 1504, 1531
FauNDI	CATATG	1 cut(s)	1951
Fnu4HI	GCNGC	1 cut(s)	1421
FokI	GGATG	5 cut(s)	767, 1158, 1193, 1334, 1810
Fsp4HI	GCNGC	1 cut(s)	1421
FspBI	CTAG	5 cut(s)	27, 300, 600, 1335, 1707
GluI	GCNGC	1 cut(s)	1421
GsaI	CCCAGC	1 cut(s)	93
GsuI	CTGGAG	1 cut(s)	1506
HaeIII	GGCC	4 cut(s)	293, 432, 866, 2027
HapII	CCGG	1 cut(s)	38
HgaI	GACGC	1 cut(s)	1613
Hin1II	CATG	9 cut(s)	731, 941, 958, 1066, 1193, 1357, 1396, 1508, 1535
HpaII	CCGG	1 cut(s)	38
HphI	GGTGA	1 cut(s)	27
Hpy166II	GTNNAC	2 cut(s)	708, 1591
Hpy188I	TCNGA	3 cut(s)	47, 926, 1697
Hpy188III	TCNNGA	6 cut(s)	424, 698, 1178, 1275, 1859, 2053
Hpy8I	GTNNAC	2 cut(s)	708, 1591
Hpy99I	CGWCG	1 cut(s)	1697
HpyAV	CCTTC	3 cut(s)	81, 114, 478
HpyCH4III	ACNGT	6 cut(s)	922, 1041, 1124, 1512, 1877, 2015
HpyCH4IV	ACGT	3 cut(s)	1137, 1281, 1917
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1403
HpyF3I	CTNAG	9 cut(s)	44, 159, 288, 475, 555, 593, 628, 769, 1623
HpySE526I	ACGT	3 cut(s)	1137, 1281, 1917
Hsp92II	CATG	9 cut(s)	731, 941, 958, 1066, 1193, 1357, 1396, 1508, 1535
Kzo9I	GATC	6 cut(s)	273, 367, 618, 926, 1641, 1844
LmnI	GCTCC	2 cut(s)	115, 1527
Lsp1109I	GCAGC	1 cut(s)	1432
LweI	GCATC	3 cut(s)	613, 666, 1406
MaeI	CTAG	5 cut(s)	27, 300, 600, 1335, 1707
MaeII	ACGT	3 cut(s)	1137, 1281, 1917
MaeIII	GTNAC	6 cut(s)	243, 487, 901, 1447, 1674, 1898
MalI	GATC	6 cut(s)	275, 369, 620, 928, 1643, 1846
MboI	GATC	6 cut(s)	273, 367, 618, 926, 1641, 1844
MboII	GAAGA	7 cut(s)	6, 506, 892, 1333, 1920, 1962, 2033
MhlI	GDGCHC	1 cut(s)	1593
MlyI	GAGTC	3 cut(s)	898, 1013, 1572
MmeI	TCCRAC	3 cut(s)	694, 1675, 1971
MroXI	GAANNNNTTC	2 cut(s)	220, 1827
MseI	TTAA	9 cut(s)	380, 468, 512, 986, 1017, 1056, 1088, 1134, 1253
MslI	CAYNNNNRTG	1 cut(s)	1218
MspI	CCGG	1 cut(s)	38
MspR9I	CCNGG	2 cut(s)	268, 1230
Mva1269I	GAATGC	1 cut(s)	268
MvaI	CCWGG	2 cut(s)	268, 1230
MwoI	GCNNNNNNNGC	1 cut(s)	1403
NdeI	CATATG	1 cut(s)	1951
NdeII	GATC	6 cut(s)	273, 367, 618, 926, 1641, 1844
NlaIII	CATG	9 cut(s)	731, 941, 958, 1066, 1193, 1357, 1396, 1508, 1535
NlaIV	GGNNCC	1 cut(s)	960
NmuCI	GTSAC	3 cut(s)	487, 901, 1898
NspV	TTCGAA	2 cut(s)	139, 359
PceI	AGGCCT	2 cut(s)	866, 2027
PctI	GAATGC	1 cut(s)	268
PdmI	GAANNNNTTC	2 cut(s)	220, 1827
PfeI	GAWTC	7 cut(s)	283, 385, 1163, 1294, 1855, 1967, 1994
PflFI	GACNNNGTC	1 cut(s)	1581
PflMI	CCANNNNNTGG	2 cut(s)	1235, 1387
PkrI	GCNGC	1 cut(s)	1422
PleI	GAGTC	3 cut(s)	898, 1012, 1572
PpsI	GAGTC	3 cut(s)	898, 1012, 1572
PshBI	ATTAAT	2 cut(s)	512, 1253
Psp1406I	AACGTT	2 cut(s)	1137, 1281
Psp6I	CCWGG	2 cut(s)	266, 1228
PspFI	CCCAGC	1 cut(s)	89
PspGI	CCWGG	2 cut(s)	266, 1228
PspN4I	GGNNCC	1 cut(s)	960
PspPI	GGNCC	2 cut(s)	431, 958
PstI	CTGCAG	1 cut(s)	685
PsyI	GACNNNGTC	1 cut(s)	1581
RsaI	GTAC	5 cut(s)	608, 814, 1188, 1268, 1564
RsaNI	GTAC	5 cut(s)	607, 813, 1187, 1267, 1563
RseI	CAYNNNNRTG	1 cut(s)	1218
SaqAI	TTAA	9 cut(s)	380, 468, 512, 986, 1017, 1056, 1088, 1134, 1253
SatI	GCNGC	1 cut(s)	1421
Sau3AI	GATC	6 cut(s)	273, 367, 618, 926, 1641, 1844
Sau96I	GGNCC	2 cut(s)	431, 958
SchI	GAGTC	3 cut(s)	898, 1013, 1572
ScrFI	CCNGG	2 cut(s)	268, 1230
SduI	GDGCHC	1 cut(s)	1593
SfaNI	GCATC	3 cut(s)	613, 666, 1406
SfcI	CTRYAG	2 cut(s)	681, 2029
SfuI	TTCGAA	2 cut(s)	139, 359
SinI	GGWCC	1 cut(s)	958
SmiMI	CAYNNNNRTG	1 cut(s)	1218
SseBI	AGGCCT	2 cut(s)	866, 2027
SsiI	CCGC	1 cut(s)	766
SspI	AATATT	1 cut(s)	364
SspMI	CTAG	5 cut(s)	27, 300, 600, 1335, 1707
StuI	AGGCCT	2 cut(s)	866, 2027
StyD4I	CCNGG	2 cut(s)	266, 1228
StyI	CCWWGG	1 cut(s)	1317
TaaI	ACNGT	6 cut(s)	922, 1041, 1124, 1512, 1877, 2015
TaiI	ACGT	3 cut(s)	1140, 1284, 1920
TaqI	TCGA	9 cut(s)	139, 195, 214, 249, 347, 359, 621, 1216, 1611
TatI	WGTACW	4 cut(s)	606, 1186, 1266, 1562
TfiI	GAWTC	7 cut(s)	283, 385, 1163, 1294, 1855, 1967, 1994
Tru1I	TTAA	9 cut(s)	380, 468, 512, 986, 1017, 1056, 1088, 1134, 1253
Tru9I	TTAA	9 cut(s)	380, 468, 512, 986, 1017, 1056, 1088, 1134, 1253
TscAI	CASTG	3 cut(s)	406, 496, 1882
TseFI	GTSAC	3 cut(s)	487, 901, 1898
TseI	GCWGC	1 cut(s)	1420
Tsp45I	GTSAC	3 cut(s)	487, 901, 1898
TspDTI	ATGAA	9 cut(s)	63, 716, 771, 893, 926, 927, 1521, 1739, 1814
TspGWI	ACGGA	1 cut(s)	1590
TspRI	CASTG	3 cut(s)	406, 496, 1882
Tth111I	GACNNNGTC	1 cut(s)	1581
Van91I	CCANNNNNTGG	2 cut(s)	1235, 1387
VneI	GTGCAC	1 cut(s)	1589
VpaK11BI	GGWCC	1 cut(s)	958
VspI	ATTAAT	2 cut(s)	512, 1253
XagI	CCTNNNNNAGG	1 cut(s)	117
XapI	RAATTY	4 cut(s)	216, 570, 665, 1823
XmnI	GAANNNNTTC	2 cut(s)	220, 1827
XspI	CTAG	5 cut(s)	27, 300, 600, 1335, 1707

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.