Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0012154

Physical Location & Seq

Genomic Coordinates Forward (+)

25197333 .. 25199195

Gene Structure 1863 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00237520.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1863 bp

ATGAGATGGCTTTCTTCTTTAGCCTCTAGGGTCTCACCGGCACTCAGAACCCTCCCTCACAAACCCTCGCCTTCATCAAAAATCAAACCCAGCAAGCCTCTGCCTTCTGCTCCTCACAAAGGTAATTACTTTGAGCTTCGAAACAATCTCATTTCAGCTAAGAATACCAATTTTCGTGTTGCTATTAAACCAATCGACCACCTCTACATTGCTCGAATTCTTTCTCGCAAGGACTGGTTTTTGTTACTCGACCACGAGTTGAATGCCAGGAGGATCGTTTTGAATCCTCAGGCCGTTGCTAGTGTCTTGCAAAACCAAGATAACCCATTGCACCCTTTCAAGTTTTCGATATGGGTTTCGAATATCGATCCCTTGTTCTTAAAGAATCATTCGGTTCGCGGTGTTTTAGCCAACACCCTTTTCAGGAAAGGCCCAGTTGTGTTGTCTGTTGAATTGCTAAAAGATATTAACAACTCAGGTTTGAAGGTCACTGAAGATTTGCTTTGCATTTTGATTGGTAGTTGGGGGAGGTTGGGTTTGGCAAAGTATTGTGCTGAGGTTTTTGGGCAAATTTCGTTTTTGGGTCTTAGTCTTAGCACTAGGTTGTACAATGCTGTGATCGATGCGTTAGTCAAGTCCAATTCACTTGACTTGGCTTATTTGAAATTCCAACAGATGCCTGCAGATAATTGCTATCCTGATAGGTTCACTTACAATATCCTCATTCATGGAGTTTGCAAGATTGGTATTGTGGATGAAGCTCTTCGTTTAGTCAAGCAAATGGAGGGCCTGGGATATTTGCCTAATGTTCGTACTTATACAATTCTGGTTGATGGGTTTTGTAATTCAAGGAGGGTTGACGAGGCCTTCGGGGTTATGAAGATAATGAGGGATAAGAATGTGACTCCTAATGAAGCTACTGTCAGATCATTGGTTCATGGGGTGTTTCGTTGCATGGACCCCAGTAAGGCTTTTGAGTTGTTATTAAGTTTTGTTGAAGGGGAGTCTCTCTTGTTTAAGGTAGCTTGTGATACTATACTGTATTGCCTTTCAATTAATCACATGGCAAGGGAGATTGCTGTGTTTCTAAAGAAATCCAGAACGAAAGGCTATTTGCCTGACAGTTCAACATTTAACATTGCAATGGTTTGTTTGACAAAGGAATCAGCTCATCCTCAGCATGAGATACATGAAATATTTGAAAGTTTTATACATCGAGGTGGAAAACCAGGATTTGGTACTTATCTTGCATTAATTGAAGCTATGTACAAGTCTGGAAACGTTGATGAGGGGAATCAAATCTTTGAGCAAATGATCAAGGATGGACTTGTATCTAGTGTCTTCTCATATAACATGGTAATTGATTGCTTTTGCAAAGCCCAAATTATGGACATGGCATCAAAGGCTTTCGGAGATATGCAGCAGGAAGGTATTCCTCCTAACCTTGTAACATTCAATACACTTCTTACCGGATATTGCAAGGCTGGAGAGGTAAGTAAGGCACATGAACTGTTGATAATGCTCCTAGAACATGGTTTCAAACCGGATATATTCACTTTTAGTGCAATAATTGACGGACTCTGTCGGGTGCACCAGATTGATGACGCTTTCGATTGTTTTGCTGAGATGGTCAGGTGGGGAATCACTCCAAATGTCATCACATACAATATATTGTTACGCTCTTTGTGTTTCGTCGGAGATATTGCTAGAGGAGTGCGACTAATGAAAAGTATGCAGGTAGATGGAATAAAACCAGATGCTTACTCTTTCAGTTATCTTATTCAAAGTCTTTGTAGGATGAACAAGGTTGAGAAAGCAGAGGAATTTTTTTCTTGCTATGTTGAGATCAGGTTTGAATCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006091 GO:0006119 GO:0006139 GO:0006163 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0006979 GO:0008150 GO:0008152 GO:0009117 GO:0009123 GO:0009126 GO:0009141 GO:0009144 GO:0009150 GO:0009161 GO:0009167 GO:0009199 GO:0009205 GO:0009259 GO:0009451 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0015980 GO:0016070 GO:0016310 GO:0016787 GO:0016788 GO:0017144 GO:0019637 GO:0019693 GO:0022900 GO:0022904 GO:0033993 GO:0034641 GO:0042221 GO:0042773 GO:0042775 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0045333 GO:0046034 GO:0046483 GO:0050896 GO:0055086 GO:0055114 GO:0071704 GO:0072521 GO:0090304 GO:0090305 GO:0097159 GO:0097305 GO:1901135 GO:1901360 GO:1901363 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

620

Amino Acids

69.9

Weight (kDa)

8.6

Isoelectric Point (pI)

32.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_long	PF17177	194 - 330	1.5e-12	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	202 - 247	1.4e-11	PPR repeat family
PPR_1	PF12854	230 - 262	8.8e-12	PPR repeat
PPR_2	PF13041	237 - 282	3e-14	PPR repeat family
PPR_1	PF12854	265 - 297	2.1e-10	PPR repeat
TPR_24	PF23276	272 - 316	3.3e-06	Fungal tetratrico peptide repeats
PPR_2	PF13041	276 - 315	2.6e-07	PPR repeat family
PPR_2	PF13041	414 - 459	9.3e-09	PPR repeat family
PPR_long	PF17177	426 - 512	6.3e-08	Pentacotripeptide-repeat region of PRORP
TPR_24	PF23276	442 - 542	5.5e-06	Fungal tetratrico peptide repeats
PPR_2	PF13041	446 - 489	2.2e-11	PPR repeat family
PPR_3	PF13812	471 - 525	7.2e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	477 - 505	2.3e-10	PPR repeat
PPR_2	PF13041	480 - 529	9.6e-16	PPR repeat family
PPR	PF01535	483 - 513	1.4e-06	PPR repeat
PPR_3	PF13812	511 - 560	6.9e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	512 - 544	5.4e-09	PPR repeat
PPR_2	PF13041	515 - 563	3.8e-18	PPR repeat family
PPR_long	PF17177	531 - 608	6.2e-06	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	540 - 595	4.9e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	546 - 578	4e-07	PPR repeat
PPR_2	PF13041	552 - 599	1.8e-11	PPR repeat family
PPR_1	PF12854	581 - 611	1.4e-07	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0012154)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16890 AT3G16890
fragaria_vesca	FvH4_5g29230
malus_domestica	MD00G1073300.v1.1
prunus_persica	Prupe.1G002300_v2.0.a1 Prupe.1G002300_v2.0.a1 Prupe.1G002300_v2.0.a1
pyrus_communis	pycom420g00330
rosa_chinensis	RchiOBHm_Chr7g0221991
rosa_laevigata	RLG00000002105
rosa_multiflora	Rmu_co8447505.1_g000001 Rmu_sc0004325.1_g000020
rosa_roxburghii	Rroxscaffold_3G00237520
rosa_rugosa	Rorug07G0204800
rosa_samantha	Rh7AG345400 Rh7BG335900 Rh7CG362900 Rh7DG343200
rosa_wichuraiana	Rw7G029280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1726
AccB7I	CCANNNNNTGG	2 cut(s)	1235, 1387
AccII	CGCG	1 cut(s)	399
AciI	CCGC	1 cut(s)	399
AclI	AACGTT	1 cut(s)	1281
AclWI	GGATC	2 cut(s)	281, 362
AcsI	RAATTY	4 cut(s)	216, 570, 665, 1823
AcuI	CTGAAG	1 cut(s)	513
AfaI	GTAC	4 cut(s)	608, 814, 1240, 1268
AfiI	CCNNNNNNNGG	5 cut(s)	119, 423, 967, 1235, 1387
AjnI	CCWGG	3 cut(s)	266, 789, 1228
AjuI	GAANNNNNNNTTGG	2 cut(s)	404, 436
AluBI	AGCT	7 cut(s)	136, 158, 761, 917, 1025, 1169, 1262
AluI	AGCT	7 cut(s)	136, 158, 761, 917, 1025, 1169, 1262
Alw21I	GWGCWC	1 cut(s)	1593
Alw26I	GTCTC	2 cut(s)	37, 1011
Alw44I	GTGCAC	1 cut(s)	1589
AlwI	GGATC	2 cut(s)	281, 362
AoxI	GGCC	4 cut(s)	291, 430, 787, 864
ApaLI	GTGCAC	1 cut(s)	1589
ApeKI	GCWGC	1 cut(s)	1420
ApoI	RAATTY	4 cut(s)	216, 570, 665, 1823
ArsI	GACNNNNNNTTYG	2 cut(s)	851, 883
AseI	ATTAAT	2 cut(s)	1056, 1253
Asp700I	GAANNNNTTC	3 cut(s)	220, 762, 1431
AspS9I	GGNCC	3 cut(s)	431, 787, 958
AsuHPI	GGTGA	1 cut(s)	27
AsuII	TTCGAA	2 cut(s)	139, 359
AvaII	GGWCC	1 cut(s)	958
AxyI	CCTNAGG	1 cut(s)	288
BaeGI	GKGCMC	1 cut(s)	1593
BauI	CACGAG	1 cut(s)	254
BbsI	GAAGAC	1 cut(s)	1333
Bbv12I	GWGCWC	1 cut(s)	1593
BbvCI	CCTCAGC	2 cut(s)	555, 1176
BbvI	GCAGC	1 cut(s)	1432
BccI	CCATC	4 cut(s)	827, 1316, 1621, 1736
BceAI	ACGGC	1 cut(s)	278
BcgI	CGANNNNNNTGC	4 cut(s)	245, 279, 1601, 1635
BciT130I	CCWGG	3 cut(s)	268, 791, 1230
BclI	TGATCA	1 cut(s)	1314
BcoDI	GTCTC	2 cut(s)	37, 1011
BfaI	CTAG	6 cut(s)	27, 300, 600, 1335, 1526, 1707
BfmI	CTRYAG	1 cut(s)	681
BfuAI	ACCTGC	1 cut(s)	1726
BisI	GCNGC	1 cut(s)	1421
BlsI	GCNGC	1 cut(s)	1422
Bme1390I	CCNGG	3 cut(s)	268, 791, 1230
Bme18I	GGWCC	1 cut(s)	958
BmgT120I	GGNCC	3 cut(s)	431, 787, 958
BmiI	GGNNCC	1 cut(s)	960
BmrFI	CCNGG	3 cut(s)	268, 791, 1230
BmrI	ACTGGG	2 cut(s)	428, 957
BmsI	GCATC	4 cut(s)	613, 666, 1406, 1747
BmuI	ACTGGG	2 cut(s)	428, 957
BpiI	GAAGAC	1 cut(s)	1333
BpmI	CTGGAG	1 cut(s)	1506
Bpu10I	CCTNAGC	2 cut(s)	555, 1176
Bpu14I	TTCGAA	2 cut(s)	139, 359
Bsa29I	ATCGAT	2 cut(s)	366, 621
BsaI	GGTCTC	1 cut(s)	37
BsaJI	CCNNGG	1 cut(s)	790
BsaWI	WCCGGW	2 cut(s)	1469, 1543
BsaXI	ACNNNNNCTCC	2 cut(s)	520, 550
Bsc4I	CCNNNNNNNGG	5 cut(s)	119, 423, 967, 1235, 1387
Bse118I	RCCGGY	1 cut(s)	37
Bse1I	ACTGG	3 cut(s)	239, 434, 963
Bse21I	CCTNAGG	1 cut(s)	288
Bse3DI	GCAATG	4 cut(s)	207, 326, 1137, 1149
BseBI	CCWGG	3 cut(s)	268, 791, 1230
BseCI	ATCGAT	2 cut(s)	366, 621
BseDI	CCNNGG	1 cut(s)	790
BseGI	GGATG	4 cut(s)	760, 1171, 1327, 1803
BseLI	CCNNNNNNNGG	5 cut(s)	119, 423, 967, 1235, 1387
BseMI	GCAATG	4 cut(s)	207, 326, 1137, 1149
BseMII	CTCAG	6 cut(s)	58, 302, 489, 546, 1190, 1614
BseNI	ACTGG	3 cut(s)	239, 434, 963
BseRI	GAGGAG	2 cut(s)	102, 1725
BseSI	GKGCMC	1 cut(s)	1593
BseXI	GCAGC	1 cut(s)	1432
BseYI	CCCAGC	1 cut(s)	89
Bsh1236I	CGCG	1 cut(s)	399
BshFI	GGCC	4 cut(s)	293, 432, 789, 866
BshVI	ATCGAT	2 cut(s)	366, 621
BsiHKAI	GWGCWC	1 cut(s)	1593
BsiSI	CCGG	3 cut(s)	38, 1470, 1544
BslI	CCNNNNNNNGG	5 cut(s)	119, 423, 967, 1235, 1387
BsmAI	GTCTC	2 cut(s)	37, 1011
BsmI	GAATGC	1 cut(s)	268
BsnI	GGCC	4 cut(s)	293, 432, 789, 866
Bso31I	GGTCTC	1 cut(s)	37
Bsp119I	TTCGAA	2 cut(s)	139, 359
Bsp1286I	GDGCHC	1 cut(s)	1593
Bsp1407I	TGTACA	2 cut(s)	606, 1266
Bsp143I	GATC	6 cut(s)	273, 367, 618, 926, 1314, 1845
BspACI	CCGC	1 cut(s)	399
BspANI	GGCC	4 cut(s)	293, 432, 789, 866
BspCNI	CTCAG	6 cut(s)	57, 301, 488, 547, 1189, 1615
BspDI	ATCGAT	2 cut(s)	366, 621
BspFNI	CGCG	1 cut(s)	399
BspLI	GGNNCC	1 cut(s)	960
BspMAI	CTGCAG	1 cut(s)	685
BspMI	ACCTGC	1 cut(s)	1726
BspPI	GGATC	2 cut(s)	281, 362
BspQI	GCTCTTC	1 cut(s)	768
BspT104I	TTCGAA	2 cut(s)	139, 359
BspTNI	GGTCTC	1 cut(s)	37
BsrDI	GCAATG	4 cut(s)	207, 326, 1137, 1149
BsrFI	RCCGGY	1 cut(s)	37
BsrGI	TGTACA	2 cut(s)	606, 1266
BsrI	ACTGG	3 cut(s)	239, 434, 963
BssAI	RCCGGY	1 cut(s)	37
BssECI	CCNNGG	1 cut(s)	790
BssMI	GATC	6 cut(s)	273, 367, 618, 926, 1314, 1845
BssSI	CACGAG	1 cut(s)	254
Bst2BI	CACGAG	1 cut(s)	254
Bst2UI	CCWGG	3 cut(s)	268, 791, 1230
Bst4CI	ACNGT	4 cut(s)	922, 1041, 1124, 1512
Bst6I	CTCTTC	1 cut(s)	768
BstAUI	TGTACA	2 cut(s)	606, 1266
BstBI	TTCGAA	2 cut(s)	139, 359
BstC8I	GCNNGC	2 cut(s)	95, 681
BstDEI	CTNAG	9 cut(s)	44, 159, 288, 475, 555, 587, 593, 1176, 1623
BstENI	CCTNNNNNAGG	1 cut(s)	117
BstF5I	GGATG	4 cut(s)	760, 1171, 1327, 1803
BstFNI	CGCG	1 cut(s)	399
BstKTI	GATC	6 cut(s)	276, 370, 621, 929, 1317, 1848
BstMAI	GTCTC	2 cut(s)	37, 1011
BstMBI	GATC	6 cut(s)	273, 367, 618, 926, 1314, 1845
BstMWI	GCNNNNNNNGC	1 cut(s)	1403
BstNI	CCWGG	3 cut(s)	268, 791, 1230
BstSCI	CCNGG	3 cut(s)	266, 789, 1228
BstSFI	CTRYAG	1 cut(s)	681
BstSLI	GKGCMC	1 cut(s)	1593
BstUI	CGCG	1 cut(s)	399
BstV1I	GCAGC	1 cut(s)	1432
BstV2I	GAAGAC	1 cut(s)	1333
Bsu15I	ATCGAT	2 cut(s)	366, 621
Bsu36I	CCTNAGG	1 cut(s)	288
BsuRI	GGCC	4 cut(s)	293, 432, 789, 866
BsuTUI	ATCGAT	2 cut(s)	366, 621
BtsCI	GGATG	4 cut(s)	760, 1171, 1327, 1803
BtsIMutI	CAGTG	1 cut(s)	489
BveI	ACCTGC	1 cut(s)	1726
Cac8I	GCNNGC	2 cut(s)	95, 681
Cfr10I	RCCGGY	1 cut(s)	37
Cfr13I	GGNCC	3 cut(s)	431, 787, 958
ClaI	ATCGAT	2 cut(s)	366, 621
CseI	GACGC	1 cut(s)	1613
Csp6I	GTAC	4 cut(s)	607, 813, 1239, 1267
CviQI	GTAC	4 cut(s)	607, 813, 1239, 1267
DdeI	CTNAG	9 cut(s)	44, 159, 288, 475, 555, 587, 593, 1176, 1623
DpnI	GATC	6 cut(s)	275, 369, 620, 928, 1316, 1847
DpnII	GATC	6 cut(s)	273, 367, 618, 926, 1314, 1845
Eam1104I	CTCTTC	1 cut(s)	768
EarI	CTCTTC	1 cut(s)	768
Eco147I	AGGCCT	1 cut(s)	866
Eco31I	GGTCTC	1 cut(s)	37
Eco47I	GGWCC	1 cut(s)	958
Eco57I	CTGAAG	1 cut(s)	513
Eco81I	CCTNAGG	1 cut(s)	288
EcoNI	CCTNNNNNAGG	1 cut(s)	117
EcoO109I	RGGNCCY	1 cut(s)	787
EcoRI	GAATTC	1 cut(s)	216
EcoRII	CCWGG	3 cut(s)	266, 789, 1228
FalI	AAGNNNNNCTT	2 cut(s)	486, 518
FbaI	TGATCA	1 cut(s)	1314
Fnu4HI	GCNGC	1 cut(s)	1421
FokI	GGATG	4 cut(s)	767, 1158, 1334, 1810
Fsp4HI	GCNGC	1 cut(s)	1421
FspBI	CTAG	6 cut(s)	27, 300, 600, 1335, 1526, 1707
GluI	GCNGC	1 cut(s)	1421
GsaI	CCCAGC	1 cut(s)	93
GsuI	CTGGAG	1 cut(s)	1506
HaeIII	GGCC	4 cut(s)	293, 432, 789, 866
HapII	CCGG	3 cut(s)	38, 1470, 1544
HgaI	GACGC	1 cut(s)	1613
HincII	GTYRAC	1 cut(s)	859
HindII	GTYRAC	1 cut(s)	859
HinfI	GANTC	9 cut(s)	283, 385, 904, 1004, 1163, 1294, 1578, 1641, 1856
HpaII	CCGG	3 cut(s)	38, 1470, 1544
HphI	GGTGA	1 cut(s)	27
Hpy166II	GTNNAC	3 cut(s)	708, 859, 1591
Hpy188I	TCNGA	4 cut(s)	47, 926, 1412, 1697
Hpy188III	TCNNGA	5 cut(s)	424, 698, 1098, 1275, 1860
Hpy8I	GTNNAC	3 cut(s)	708, 859, 1591
Hpy99I	CGWCG	1 cut(s)	1697
HpyAV	CCTTC	6 cut(s)	81, 114, 478, 877, 992, 1421
HpyCH4III	ACNGT	4 cut(s)	922, 1041, 1124, 1512
HpyCH4IV	ACGT	1 cut(s)	1281
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1403
HpyF3I	CTNAG	9 cut(s)	44, 159, 288, 475, 555, 587, 593, 1176, 1623
HpySE526I	ACGT	1 cut(s)	1281
Ksp22I	TGATCA	1 cut(s)	1314
Kzo9I	GATC	6 cut(s)	273, 367, 618, 926, 1314, 1845
LguI	GCTCTTC	1 cut(s)	768
LmnI	GCTCC	2 cut(s)	115, 1527
Lsp1109I	GCAGC	1 cut(s)	1432
LweI	GCATC	4 cut(s)	613, 666, 1406, 1747
MaeI	CTAG	6 cut(s)	27, 300, 600, 1335, 1526, 1707
MaeII	ACGT	1 cut(s)	1281
MaeIII	GTNAC	5 cut(s)	243, 487, 901, 1447, 1674
MalI	GATC	6 cut(s)	275, 369, 620, 928, 1316, 1847
MboI	GATC	6 cut(s)	273, 367, 618, 926, 1314, 1845
MboII	GAAGA	5 cut(s)	6, 506, 755, 892, 1333
MhlI	GDGCHC	1 cut(s)	1593
MlyI	GAGTC	3 cut(s)	898, 1013, 1572
MmeI	TCCRAC	2 cut(s)	694, 1675
MroXI	GAANNNNTTC	3 cut(s)	220, 762, 1431
MseI	TTAA	8 cut(s)	186, 380, 468, 986, 1017, 1056, 1134, 1253
MslI	CAYNNNNRTG	2 cut(s)	1142, 1218
MspI	CCGG	3 cut(s)	38, 1470, 1544
MspR9I	CCNGG	3 cut(s)	268, 791, 1230
Mva1269I	GAATGC	1 cut(s)	268
MvaI	CCWGG	3 cut(s)	268, 791, 1230
MvnI	CGCG	1 cut(s)	399
MwoI	GCNNNNNNNGC	1 cut(s)	1403
NdeII	GATC	6 cut(s)	273, 367, 618, 926, 1314, 1845
NlaIV	GGNNCC	1 cut(s)	960
NmuCI	GTSAC	2 cut(s)	487, 901
NspV	TTCGAA	2 cut(s)	139, 359
PceI	AGGCCT	1 cut(s)	866
PciSI	GCTCTTC	1 cut(s)	768
PctI	GAATGC	1 cut(s)	268
PdmI	GAANNNNTTC	3 cut(s)	220, 762, 1431
PfeI	GAWTC	6 cut(s)	283, 385, 1163, 1294, 1641, 1856
PflFI	GACNNNGTC	1 cut(s)	1581
PflMI	CCANNNNNTGG	2 cut(s)	1235, 1387
PkrI	GCNGC	1 cut(s)	1422
PleI	GAGTC	3 cut(s)	898, 1012, 1572
PpsI	GAGTC	3 cut(s)	898, 1012, 1572
PshBI	ATTAAT	2 cut(s)	1056, 1253
Psp1406I	AACGTT	1 cut(s)	1281
Psp6I	CCWGG	3 cut(s)	266, 789, 1228
PspFI	CCCAGC	1 cut(s)	89
PspGI	CCWGG	3 cut(s)	266, 789, 1228
PspN4I	GGNNCC	1 cut(s)	960
PspPI	GGNCC	3 cut(s)	431, 787, 958
PstI	CTGCAG	1 cut(s)	685
PsyI	GACNNNGTC	1 cut(s)	1581
RsaI	GTAC	4 cut(s)	608, 814, 1240, 1268
RsaNI	GTAC	4 cut(s)	607, 813, 1239, 1267
RseI	CAYNNNNRTG	2 cut(s)	1142, 1218
SapI	GCTCTTC	1 cut(s)	768
SaqAI	TTAA	8 cut(s)	186, 380, 468, 986, 1017, 1056, 1134, 1253
SatI	GCNGC	1 cut(s)	1421
Sau3AI	GATC	6 cut(s)	273, 367, 618, 926, 1314, 1845
Sau96I	GGNCC	3 cut(s)	431, 787, 958
SchI	GAGTC	3 cut(s)	898, 1013, 1572
ScrFI	CCNGG	3 cut(s)	268, 791, 1230
SduI	GDGCHC	1 cut(s)	1593
SfaNI	GCATC	4 cut(s)	613, 666, 1406, 1747
SfcI	CTRYAG	1 cut(s)	681
SfuI	TTCGAA	2 cut(s)	139, 359
SinI	GGWCC	1 cut(s)	958
SmiMI	CAYNNNNRTG	2 cut(s)	1142, 1218
SseBI	AGGCCT	1 cut(s)	866
SsiI	CCGC	1 cut(s)	399
SspI	AATATT	1 cut(s)	1197
SspMI	CTAG	6 cut(s)	27, 300, 600, 1335, 1526, 1707
StuI	AGGCCT	1 cut(s)	866
StyD4I	CCNGG	3 cut(s)	266, 789, 1228
TaaI	ACNGT	4 cut(s)	922, 1041, 1124, 1512
TaiI	ACGT	1 cut(s)	1284
TatI	WGTACW	2 cut(s)	606, 1266
TfiI	GAWTC	6 cut(s)	283, 385, 1163, 1294, 1641, 1856
Tru1I	TTAA	8 cut(s)	186, 380, 468, 986, 1017, 1056, 1134, 1253
Tru9I	TTAA	8 cut(s)	186, 380, 468, 986, 1017, 1056, 1134, 1253
TscAI	CASTG	1 cut(s)	496
TseFI	GTSAC	2 cut(s)	487, 901
TseI	GCWGC	1 cut(s)	1420
Tsp45I	GTSAC	2 cut(s)	487, 901
TspGWI	ACGGA	1 cut(s)	1590
TspRI	CASTG	1 cut(s)	496
Tth111I	GACNNNGTC	1 cut(s)	1581
Van91I	CCANNNNNTGG	2 cut(s)	1235, 1387
VneI	GTGCAC	1 cut(s)	1589
VpaK11BI	GGWCC	1 cut(s)	958
VspI	ATTAAT	2 cut(s)	1056, 1253
XagI	CCTNNNNNAGG	1 cut(s)	117
XapI	RAATTY	4 cut(s)	216, 570, 665, 1823
XmnI	GAANNNNTTC	3 cut(s)	220, 762, 1431
XspI	CTAG	6 cut(s)	27, 300, 600, 1335, 1526, 1707

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.