EMB1865 EMB1865 (embryo defective 1865)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G18390 |
| fragaria_vesca | FvH4_5g12070 FvH4_5g12070 FvH4_5g12070 FvH4_5g12070 |
| malus_domestica | MD06G1216600.v1.1 MD14G1227100.v1.1 |
| prunus_persica | Prupe.5G221800_v2.0.a1 |
| pyrus_communis | pycom06g19300 pycom14g18850 |
| rosa_chinensis | RchiOBHm_Chr7g0185501 |
| rosa_laevigata | RLG00000004907 |
| rosa_multiflora | Rmu_sc0008223.1_g000008 Rmu_sc0010190.1_g000020 Rmu_sc0042727.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00268880 |
| rosa_rugosa | Rorug06G0469800 |
| rosa_samantha | Rh7AG072900 Rh7BG074700 Rh7CG074800 Rh7DG074700 |
| rosa_wichuraiana | Rw7G006220 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1281 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 800, 1414 |
| AccII | CGCG | 3 cut(s) | 133, 398, 2542 |
| AccIII | TCCGGA | 2 cut(s) | 272, 1983 |
| AclI | AACGTT | 1 cut(s) | 2290 |
| AclWI | GGATC | 2 cut(s) | 791, 1115 |
| AcoI | YGGCCR | 3 cut(s) | 149, 1020, 1734 |
| AcsI | RAATTY | 4 cut(s) | 330, 427, 1175, 1321 |
| AdeI | CACNNNGTG | 1 cut(s) | 880 |
| AfaI | GTAC | 4 cut(s) | 169, 1228, 1236, 1713 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 512, 800, 1414, 1438, 1764, 1990 |
| AgsI | TTSAA | 9 cut(s) | 541, 1175, 1214, 1599, 1649, 1805, 1815, 1883, 2287 |
| AjnI | CCWGG | 1 cut(s) | 1273 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1863, 1895 |
| Alw21I | GWGCWC | 3 cut(s) | 706, 723, 1105 |
| Alw26I | GTCTC | 5 cut(s) | 550, 1028, 2126, 2230, 2245 |
| Alw44I | GTGCAC | 1 cut(s) | 1101 |
| AlwI | GGATC | 2 cut(s) | 791, 1115 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1724 |
| Aor13HI | TCCGGA | 2 cut(s) | 272, 1983 |
| AoxI | GGCC | 6 cut(s) | 149, 257, 903, 951, 1020, 1734 |
| ApaLI | GTGCAC | 1 cut(s) | 1101 |
| ApeKI | GCWGC | 5 cut(s) | 163, 1418, 1421, 1543, 1607 |
| ApoI | RAATTY | 4 cut(s) | 330, 427, 1175, 1321 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1009, 1041, 2375, 2407 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1586, 2187 |
| AspLEI | GCGC | 2 cut(s) | 2206, 2544 |
| AspS9I | GGNCC | 6 cut(s) | 904, 951, 995, 1025, 1202, 1934 |
| AsuC2I | CCSGG | 2 cut(s) | 295, 2140 |
| AsuII | TTCGAA | 1 cut(s) | 2381 |
| AvaII | GGWCC | 4 cut(s) | 995, 1025, 1202, 1934 |
| BaeGI | GKGCMC | 1 cut(s) | 1105 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1218, 1251 |
| BanII | GRGCYC | 2 cut(s) | 706, 723 |
| BauI | CACGAG | 2 cut(s) | 888, 2312 |
| BbsI | GAAGAC | 2 cut(s) | 905, 1526 |
| Bbv12I | GWGCWC | 3 cut(s) | 706, 723, 1105 |
| BbvCI | CCTCAGC | 1 cut(s) | 576 |
| BbvI | GCAGC | 5 cut(s) | 150, 1408, 1430, 1530, 1619 |
| BccI | CCATC | 7 cut(s) | 715, 755, 814, 1755, 1794, 2036, 2489 |
| BceAI | ACGGC | 4 cut(s) | 334, 505, 761, 918 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 866, 900 |
| BciT130I | CCWGG | 1 cut(s) | 1275 |
| BciVI | GTATCC | 2 cut(s) | 1490, 2036 |
| BclI | TGATCA | 2 cut(s) | 286, 1945 |
| BcnI | CCSGG | 2 cut(s) | 295, 2140 |
| BcoDI | GTCTC | 5 cut(s) | 550, 1028, 2126, 2230, 2245 |
| BfaI | CTAG | 5 cut(s) | 63, 699, 1830, 2147, 2514 |
| BfuI | GTATCC | 2 cut(s) | 1490, 2036 |
| BglII | AGATCT | 1 cut(s) | 1434 |
| BisI | GCNGC | 6 cut(s) | 164, 645, 1419, 1422, 1544, 1608 |
| BlsI | GCNGC | 6 cut(s) | 165, 646, 1420, 1423, 1545, 1609 |
| Bme1390I | CCNGG | 3 cut(s) | 295, 1275, 2140 |
| Bme18I | GGWCC | 4 cut(s) | 995, 1025, 1202, 1934 |
| BmgT120I | GGNCC | 6 cut(s) | 904, 951, 995, 1025, 1202, 1934 |
| BmiI | GGNNCC | 2 cut(s) | 12, 2190 |
| BmrFI | CCNGG | 3 cut(s) | 295, 1275, 2140 |
| BmrI | ACTGGG | 2 cut(s) | 1239, 1317 |
| BmsI | GCATC | 3 cut(s) | 558, 672, 2071 |
| BmuI | ACTGGG | 2 cut(s) | 1239, 1317 |
| BpiI | GAAGAC | 2 cut(s) | 905, 1526 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 31, 63, 1943, 1975 |
| BpmI | CTGGAG | 4 cut(s) | 534, 1415, 1764, 2363 |
| Bpu10I | CCTNAGC | 2 cut(s) | 576, 1198 |
| Bpu14I | TTCGAA | 1 cut(s) | 2381 |
| BpuEI | CTTGAG | 2 cut(s) | 1737, 2269 |
| BpuMI | CCSGG | 2 cut(s) | 295, 2140 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1944 |
| BsaI | GGTCTC | 3 cut(s) | 550, 2230, 2245 |
| BsaJI | CCNNGG | 7 cut(s) | 242, 617, 1408, 1962, 2029, 2218, 2255 |
| BsaWI | WCCGGW | 2 cut(s) | 272, 1983 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 663, 693, 2157, 2187 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 512, 800, 1414, 1438, 1764, 1990 |
| Bse118I | RCCGGY | 2 cut(s) | 505, 1022 |
| Bse1I | ACTGG | 6 cut(s) | 517, 717, 934, 1234, 1312, 2346 |
| Bse3DI | GCAATG | 3 cut(s) | 98, 2295, 2307 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1944 |
| BseAI | TCCGGA | 2 cut(s) | 272, 1983 |
| BseBI | CCWGG | 1 cut(s) | 1275 |
| BseDI | CCNNGG | 7 cut(s) | 242, 617, 1408, 1962, 2029, 2218, 2255 |
| BseGI | GGATG | 8 cut(s) | 266, 451, 607, 766, 1317, 1516, 2431, 2491 |
| BseJI | GATNNNNATC | 1 cut(s) | 1944 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 512, 800, 1414, 1438, 1764, 1990 |
| BseMI | GCAATG | 3 cut(s) | 98, 2295, 2307 |
| BseMII | CTCAG | 6 cut(s) | 29, 567, 729, 764, 1363, 1561 |
| BseNI | ACTGG | 6 cut(s) | 517, 717, 934, 1234, 1312, 2346 |
| BseRI | GAGGAG | 5 cut(s) | 228, 359, 684, 706, 2144 |
| BseSI | GKGCMC | 1 cut(s) | 1105 |
| BseXI | GCAGC | 5 cut(s) | 150, 1408, 1430, 1530, 1619 |
| BseYI | CCCAGC | 1 cut(s) | 800 |
| Bsh1236I | CGCG | 3 cut(s) | 133, 398, 2542 |
| BshFI | GGCC | 6 cut(s) | 151, 259, 905, 953, 1022, 1736 |
| BsiHKAI | GWGCWC | 3 cut(s) | 706, 723, 1105 |
| BsiSI | CCGG | 7 cut(s) | 273, 294, 506, 954, 1023, 1984, 2140 |
| BslFI | GGGAC | 2 cut(s) | 1031, 2007 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 512, 800, 1414, 1438, 1764, 1990 |
| BsmAI | GTCTC | 5 cut(s) | 550, 1028, 2126, 2230, 2245 |
| BsmFI | GGGAC | 2 cut(s) | 1031, 2007 |
| BsnI | GGCC | 6 cut(s) | 151, 259, 905, 953, 1022, 1736 |
| Bso31I | GGTCTC | 3 cut(s) | 550, 2230, 2245 |
| Bsp119I | TTCGAA | 1 cut(s) | 2381 |
| Bsp1286I | GDGCHC | 3 cut(s) | 706, 723, 1105 |
| Bsp13I | TCCGGA | 2 cut(s) | 272, 1983 |
| Bsp19I | CCATGG | 1 cut(s) | 617 |
| BspANI | GGCC | 6 cut(s) | 151, 259, 905, 953, 1022, 1736 |
| BspCNI | CTCAG | 6 cut(s) | 30, 568, 730, 765, 1362, 1560 |
| BspEI | TCCGGA | 2 cut(s) | 272, 1983 |
| BspFNI | CGCG | 3 cut(s) | 133, 398, 2542 |
| BspLI | GGNNCC | 2 cut(s) | 12, 2190 |
| BspPI | GGATC | 2 cut(s) | 791, 1115 |
| BspQI | GCTCTTC | 3 cut(s) | 110, 630, 846 |
| BspT104I | TTCGAA | 1 cut(s) | 2381 |
| BspTNI | GGTCTC | 3 cut(s) | 550, 2230, 2245 |
| BsrDI | GCAATG | 3 cut(s) | 98, 2295, 2307 |
| BsrFI | RCCGGY | 2 cut(s) | 505, 1022 |
| BsrI | ACTGG | 6 cut(s) | 517, 717, 934, 1234, 1312, 2346 |
| BssAI | RCCGGY | 2 cut(s) | 505, 1022 |
| BssECI | CCNNGG | 7 cut(s) | 242, 617, 1408, 1962, 2029, 2218, 2255 |
| BssSI | CACGAG | 2 cut(s) | 888, 2312 |
| BssT1I | CCWWGG | 4 cut(s) | 242, 617, 1408, 2255 |
| Bst2BI | CACGAG | 2 cut(s) | 888, 2312 |
| Bst2UI | CCWGG | 1 cut(s) | 1275 |
| Bst4CI | ACNGT | 5 cut(s) | 727, 1184, 1899, 2219, 2399 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1082 |
| BstBI | TTCGAA | 1 cut(s) | 2381 |
| BstC8I | GCNNGC | 8 cut(s) | 176, 280, 573, 642, 813, 885, 1066, 1726 |
| BstDEI | CTNAG | 8 cut(s) | 38, 576, 738, 773, 1198, 1349, 1547, 2321 |
| BstDSI | CCRYGG | 3 cut(s) | 617, 2029, 2218 |
| BstF5I | GGATG | 8 cut(s) | 266, 451, 607, 766, 1317, 1516, 2431, 2491 |
| BstFNI | CGCG | 3 cut(s) | 133, 398, 2542 |
| BstHHI | GCGC | 2 cut(s) | 2206, 2544 |
| BstMAI | GTCTC | 5 cut(s) | 550, 1028, 2126, 2230, 2245 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 180, 862, 1082, 1463, 1616 |
| BstNI | CCWGG | 1 cut(s) | 1275 |
| BstNSI | RCATGY | 1 cut(s) | 2062 |
| BstSCI | CCNGG | 3 cut(s) | 293, 1273, 2138 |
| BstSLI | GKGCMC | 1 cut(s) | 1105 |
| BstUI | CGCG | 3 cut(s) | 133, 398, 2542 |
| BstV1I | GCAGC | 5 cut(s) | 150, 1408, 1430, 1530, 1619 |
| BstV2I | GAAGAC | 2 cut(s) | 905, 1526 |
| BstX2I | RGATCY | 2 cut(s) | 1120, 1434 |
| BstYI | RGATCY | 2 cut(s) | 1120, 1434 |
| BsuI | GTATCC | 2 cut(s) | 1490, 2036 |
| BsuRI | GGCC | 6 cut(s) | 151, 259, 905, 953, 1022, 1736 |
| BtgI | CCRYGG | 3 cut(s) | 617, 2029, 2218 |
| BtgZI | GCGATG | 2 cut(s) | 1083, 2523 |
| BtsCI | GGATG | 8 cut(s) | 266, 451, 607, 766, 1317, 1516, 2431, 2491 |
| BtsI | GCAGTG | 1 cut(s) | 822 |
| BtsIMutI | CAGTG | 4 cut(s) | 35, 710, 822, 2404 |
| Cac8I | GCNNGC | 8 cut(s) | 176, 280, 573, 642, 813, 885, 1066, 1726 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1724 |
| CfoI | GCGC | 2 cut(s) | 2206, 2544 |
| Cfr10I | RCCGGY | 2 cut(s) | 505, 1022 |
| Cfr13I | GGNCC | 6 cut(s) | 904, 951, 995, 1025, 1202, 1934 |
| CseI | GACGC | 3 cut(s) | 122, 911, 1256 |
| Csp6I | GTAC | 4 cut(s) | 168, 1227, 1235, 1712 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1202, 1237 |
| CviAII | CATG | 6 cut(s) | 290, 618, 895, 908, 1374, 2059 |
| CviQI | GTAC | 4 cut(s) | 168, 1227, 1235, 1712 |
| DdeI | CTNAG | 8 cut(s) | 38, 576, 738, 773, 1198, 1349, 1547, 2321 |
| DraIII | CACNNNGTG | 1 cut(s) | 880 |
| EaeI | YGGCCR | 3 cut(s) | 149, 1020, 1734 |
| EciI | GGCGGA | 5 cut(s) | 336, 507, 662, 731, 1523 |
| Ecl136II | GAGCTC | 2 cut(s) | 704, 721 |
| Eco130I | CCWWGG | 4 cut(s) | 242, 617, 1408, 2255 |
| Eco24I | GRGCYC | 2 cut(s) | 706, 723 |
| Eco31I | GGTCTC | 3 cut(s) | 550, 2230, 2245 |
| Eco47I | GGWCC | 4 cut(s) | 995, 1025, 1202, 1934 |
| Eco53kI | GAGCTC | 2 cut(s) | 704, 721 |
| EcoICRI | GAGCTC | 2 cut(s) | 704, 721 |
| EcoO109I | RGGNCCY | 1 cut(s) | 995 |
| EcoRI | GAATTC | 1 cut(s) | 330 |
| EcoRII | CCWGG | 1 cut(s) | 1273 |
| EcoT14I | CCWWGG | 4 cut(s) | 242, 617, 1408, 2255 |
| EcoT22I | ATGCAT | 1 cut(s) | 2064 |
| EcoT38I | GRGCYC | 2 cut(s) | 706, 723 |
| ErhI | CCWWGG | 4 cut(s) | 242, 617, 1408, 2255 |
| FaeI | CATG | 6 cut(s) | 293, 621, 898, 911, 1377, 2062 |
| FaqI | GGGAC | 2 cut(s) | 1031, 2007 |
| FatI | CATG | 6 cut(s) | 289, 617, 894, 907, 1373, 2058 |
| FbaI | TGATCA | 2 cut(s) | 286, 1945 |
| Fnu4HI | GCNGC | 6 cut(s) | 164, 645, 1419, 1422, 1544, 1608 |
| FokI | GGATG | 8 cut(s) | 253, 458, 614, 773, 1324, 1523, 2438, 2498 |
| FriOI | GRGCYC | 2 cut(s) | 706, 723 |
| Fsp4HI | GCNGC | 6 cut(s) | 164, 645, 1419, 1422, 1544, 1608 |
| FspBI | CTAG | 5 cut(s) | 63, 699, 1830, 2147, 2514 |
| GlaI | GCGC | 2 cut(s) | 2205, 2543 |
| GluI | GCNGC | 6 cut(s) | 164, 645, 1419, 1422, 1544, 1608 |
| GsaI | CCCAGC | 1 cut(s) | 804 |
| GsuI | CTGGAG | 4 cut(s) | 534, 1415, 1764, 2363 |
| HaeIII | GGCC | 6 cut(s) | 151, 259, 905, 953, 1022, 1736 |
| HapII | CCGG | 7 cut(s) | 273, 294, 506, 954, 1023, 1984, 2140 |
| HgaI | GACGC | 3 cut(s) | 122, 911, 1256 |
| HhaI | GCGC | 2 cut(s) | 2206, 2544 |
| Hin1II | CATG | 6 cut(s) | 293, 621, 898, 911, 1377, 2062 |
| Hin6I | GCGC | 2 cut(s) | 2204, 2542 |
| HinP1I | GCGC | 2 cut(s) | 2204, 2542 |
| HincII | GTYRAC | 1 cut(s) | 137 |
| HindII | GTYRAC | 1 cut(s) | 137 |
| HindIII | AAGCTT | 2 cut(s) | 1809, 2093 |
| HinfI | GANTC | 8 cut(s) | 734, 1036, 1645, 1924, 2046, 2260, 2402, 2501 |
| HpaII | CCGG | 7 cut(s) | 273, 294, 506, 954, 1023, 1984, 2140 |
| Hpy166II | GTNNAC | 5 cut(s) | 137, 980, 1103, 1205, 1246 |
| Hpy8I | GTNNAC | 5 cut(s) | 137, 980, 1103, 1205, 1246 |
| Hpy99I | CGWCG | 2 cut(s) | 210, 927 |
| HpyAV | CCTTC | 8 cut(s) | 96, 373, 659, 1576, 1601, 1605, 1762, 1999 |
| HpyCH4III | ACNGT | 5 cut(s) | 727, 1184, 1899, 2219, 2399 |
| HpyCH4IV | ACGT | 3 cut(s) | 220, 1207, 2290 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 180, 862, 1082, 1463, 1616 |
| HpyF3I | CTNAG | 8 cut(s) | 38, 576, 738, 773, 1198, 1349, 1547, 2321 |
| HpySE526I | ACGT | 3 cut(s) | 220, 1207, 2290 |
| Hsp92II | CATG | 6 cut(s) | 293, 621, 898, 911, 1377, 2062 |
| HspAI | GCGC | 2 cut(s) | 2204, 2542 |
| Kpn2I | TCCGGA | 2 cut(s) | 272, 1983 |
| Ksp22I | TGATCA | 2 cut(s) | 286, 1945 |
| LguI | GCTCTTC | 3 cut(s) | 110, 630, 846 |
| LmnI | GCTCC | 5 cut(s) | 16, 192, 275, 709, 718 |
| Lsp1109I | GCAGC | 5 cut(s) | 150, 1408, 1430, 1530, 1619 |
| LweI | GCATC | 3 cut(s) | 558, 672, 2071 |
| MaeI | CTAG | 5 cut(s) | 63, 699, 1830, 2147, 2514 |
| MaeII | ACGT | 3 cut(s) | 220, 1207, 2290 |
| MaeIII | GTNAC | 5 cut(s) | 508, 741, 890, 1703, 2142 |
| MflI | RGATCY | 2 cut(s) | 1120, 1434 |
| MhlI | GDGCHC | 3 cut(s) | 706, 723, 1105 |
| MlyI | GAGTC | 2 cut(s) | 1030, 2055 |
| Mph1103I | ATGCAT | 1 cut(s) | 2064 |
| MroI | TCCGGA | 2 cut(s) | 272, 1983 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1586, 2187 |
| MseI | TTAA | 6 cut(s) | 18, 486, 752, 1179, 1634, 1839 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2300 |
| MspA1I | CMGCKG | 1 cut(s) | 1421 |
| MspI | CCGG | 7 cut(s) | 273, 294, 506, 954, 1023, 1984, 2140 |
| MspR9I | CCNGG | 3 cut(s) | 295, 1275, 2140 |
| MvaI | CCWGG | 1 cut(s) | 1275 |
| MvnI | CGCG | 3 cut(s) | 133, 398, 2542 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 180, 862, 1082, 1463, 1616 |
| NciI | CCSGG | 2 cut(s) | 295, 2140 |
| NcoI | CCATGG | 1 cut(s) | 617 |
| NlaIII | CATG | 6 cut(s) | 293, 621, 898, 911, 1377, 2062 |
| NlaIV | GGNNCC | 2 cut(s) | 12, 2190 |
| NmeAIII | GCCGAG | 1 cut(s) | 1762 |
| NmuCI | GTSAC | 3 cut(s) | 508, 890, 1703 |
| NsiI | ATGCAT | 1 cut(s) | 2064 |
| NspI | RCATGY | 1 cut(s) | 2062 |
| NspV | TTCGAA | 1 cut(s) | 2381 |
| PciSI | GCTCTTC | 3 cut(s) | 110, 630, 846 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2387 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1586, 2187 |
| PfeI | GAWTC | 6 cut(s) | 734, 1645, 1924, 2260, 2402, 2501 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 800, 1414 |
| PkrI | GCNGC | 6 cut(s) | 165, 646, 1420, 1423, 1545, 1609 |
| PleI | GAGTC | 2 cut(s) | 1030, 2054 |
| PpsI | GAGTC | 2 cut(s) | 1030, 2054 |
| PpuMI | RGGWCCY | 1 cut(s) | 995 |
| PsiI | TTATAA | 1 cut(s) | 1281 |
| Psp124BI | GAGCTC | 2 cut(s) | 706, 723 |
| Psp1406I | AACGTT | 1 cut(s) | 2290 |
| Psp5II | RGGWCCY | 1 cut(s) | 995 |
| Psp6I | CCWGG | 1 cut(s) | 1273 |
| PspFI | CCCAGC | 1 cut(s) | 800 |
| PspGI | CCWGG | 1 cut(s) | 1273 |
| PspN4I | GGNNCC | 2 cut(s) | 12, 2190 |
| PspPI | GGNCC | 6 cut(s) | 904, 951, 995, 1025, 1202, 1934 |
| PspPPI | RGGWCCY | 1 cut(s) | 995 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1724 |
| PsuI | RGATCY | 2 cut(s) | 1120, 1434 |
| PvuII | CAGCTG | 1 cut(s) | 1421 |
| RsaI | GTAC | 4 cut(s) | 169, 1228, 1236, 1713 |
| RsaNI | GTAC | 4 cut(s) | 168, 1227, 1235, 1712 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2300 |
| SacI | GAGCTC | 2 cut(s) | 706, 723 |
| SapI | GCTCTTC | 3 cut(s) | 110, 630, 846 |
| SaqAI | TTAA | 6 cut(s) | 18, 486, 752, 1179, 1634, 1839 |
| SatI | GCNGC | 6 cut(s) | 164, 645, 1419, 1422, 1544, 1608 |
| Sau96I | GGNCC | 6 cut(s) | 904, 951, 995, 1025, 1202, 1934 |
| SchI | GAGTC | 2 cut(s) | 1030, 2055 |
| ScrFI | CCNGG | 3 cut(s) | 295, 1275, 2140 |
| SduI | GDGCHC | 3 cut(s) | 706, 723, 1105 |
| SfaNI | GCATC | 3 cut(s) | 558, 672, 2071 |
| SfuI | TTCGAA | 1 cut(s) | 2381 |
| SinI | GGWCC | 4 cut(s) | 995, 1025, 1202, 1934 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2300 |
| SmlI | CTYRAG | 2 cut(s) | 1752, 2248 |
| SmoI | CTYRAG | 2 cut(s) | 1752, 2248 |
| SspMI | CTAG | 5 cut(s) | 63, 699, 1830, 2147, 2514 |
| SstI | GAGCTC | 2 cut(s) | 706, 723 |
| StyD4I | CCNGG | 3 cut(s) | 293, 1273, 2138 |
| StyI | CCWWGG | 4 cut(s) | 242, 617, 1408, 2255 |
| TaaI | ACNGT | 5 cut(s) | 727, 1184, 1899, 2219, 2399 |
| TaiI | ACGT | 3 cut(s) | 223, 1210, 2293 |
| TaqI | TCGA | 6 cut(s) | 208, 925, 1656, 1874, 2381, 2520 |
| TaqII | GACCGA | 1 cut(s) | 324 |
| TauI | GCSGC | 1 cut(s) | 647 |
| TfiI | GAWTC | 6 cut(s) | 734, 1645, 1924, 2260, 2402, 2501 |
| Tru1I | TTAA | 6 cut(s) | 18, 486, 752, 1179, 1634, 1839 |
| Tru9I | TTAA | 6 cut(s) | 18, 486, 752, 1179, 1634, 1839 |
| TscAI | CASTG | 4 cut(s) | 42, 717, 822, 2404 |
| TseFI | GTSAC | 3 cut(s) | 508, 890, 1703 |
| TseI | GCWGC | 5 cut(s) | 163, 1418, 1421, 1543, 1607 |
| Tsp45I | GTSAC | 3 cut(s) | 508, 890, 1703 |
| TspDTI | ATGAA | 6 cut(s) | 911, 1086, 1527, 2018, 2454, 2502 |
| TspGWI | ACGGA | 4 cut(s) | 41, 252, 439, 2018 |
| TspRI | CASTG | 4 cut(s) | 42, 717, 822, 2404 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 800, 1414 |
| VneI | GTGCAC | 1 cut(s) | 1101 |
| VpaK11BI | GGWCC | 4 cut(s) | 995, 1025, 1202, 1934 |
| XapI | RAATTY | 4 cut(s) | 330, 427, 1175, 1321 |
| XceI | RCATGY | 1 cut(s) | 2062 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1385 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1586, 2187 |
| XspI | CTAG | 5 cut(s) | 63, 699, 1830, 2147, 2514 |
| Zsp2I | ATGCAT | 1 cut(s) | 2064 |