Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0009432

Physical Location & Seq

Genomic Coordinates Forward (+)

63591156 .. 63597148

Gene Structure 5993 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000004907

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2493 bp

ATGGCCTTCGCTACCGCCAAAATTTCCGAAATGCCACTCAGAAACTCACTCCCGCTCACCTCTCACTCCTCTTCCTCTCTCAACCTCCTCTTCTCGTCCCCAAAACCGTCATTTCACATCCTCAAGCCCTTCTCTGCTCTCAGAACCACCGAGCACGGCGGCAACCCGAACGCGAGGCCGTCGCCGCACAAGTCCAAGCCCTCGTCGTCCTCCTCCTCCTCCACCGCGCCGTGGCTGAATAAGTGGCCCTCTCGCGGTGCTCCGTCGGAGTTGCCCCGCCATAAGGTCAACGATAGAGTCAAGGAGTCCAAGGGTGGTGGAGAGAAGCCGAGTAATGGCGCTAGGTACGTGGACAAGGACAAAGGCCAGAGCGCGATAGAGAGGATCGTGTTCCGGTTGCGGAACCTAGGGTTAGGCGACGAAGACGACGAGGAAGAGAGCGGTGATGGTGTTGAATTGGACGGTCCGGATTCAATGCCGGCGGCGAGCGGAGAGGAGAAGCTCGGCGATTTGCTGCAGCGGGAGTGGGTCCGGCCGGACTATATATTGGCGGAGGAGAAGGGCGACGATGACGTGGCGCTGCCGTGGGAGAAGGAGGAGGAGGAGGAATTGAGTGAGGATGAGGAGGTGAAGGGGCTGAGGAGAGCTCGGAGGTCGAAGGCGCCGAGCTTGGCTGAGCTGACGATTGAGGATGAGGAGCTGAGGCGATTGAGGAGGTTGGGAATGTTCCTGAGGGAGAGGATCAGTGTGCCGAAAGCCGGGATTACGCAGGCTGTGCTGGAGAAGATTCATGATAAGTGGAGGAAGGAGGAGCTGGTCAGGCTCAAGTTTCATGAGGTTTTGGCTCATGATATGAAAACTGCTCATGAGATTGTTGAGCGTCGAACAGGAGGTTTAGTTTTATGGAGATCAGGGAGTGTCATGGTTGTGTACCGTGGGATTAACTACAAAGGCCCTTCTAAATCCGAACCCGTTGGTAGGGAAGGAAATGCTCTTTTCATCCCAGATGTTACATCAGCTGAAACTCCGGTAACAAGAAGTGGCAATGATGTGACTTCAACTCCAGATAAGACTGAGCAAGCTGTGAAAATTCCAGCACCTCTTCCGAAGATGACGGAGGAAGAAGCTGAATTCAACAGCTTATTGGATGAATTAGGTCCTCGTTTTGTTGAGTATTGGGGTACAGGAATACTTCCTGTTGACGCTGATTTACTTCCTAAAACAATCCCGGGTTACAAAACACCTTTCAGGCTTCTTCCTATCGGGATGCGATCACGGCTGACTAATGCAGAGATGACTAATTTACGGAAACTTGCTAAATCAATTCCATGTCATTTTGCCCTTGGGAGGAATAGAAACCATCAAGGATTAGCATCTGCTATACTTAAAGTTTGGGAGAAAAGTTCTGTGGCGAAGATTGCTGTCAAACGAGGTATCCAGAATACAAACAACAAAATAATGGCTGAGGAGCTGAAGGCATTAACAGGTGGTGTTTTACTACTCAGAAACAAATATTACATTGTCATTTACCGTGGAAAGGACTTCATCCCAACAAGTGTAGCTGCTGCTCTGGCTGAAAGACAGGCACTAACGAAACAGGTTCAAGATGTTGAAGAGATAGTGCGTGTCAAACCAATAGATGCAGCTTCTTCGGGTGCAGAGGAAGGACAGGCACTTGCAGGAACTTTGGCAGAGTTCTACGAGGCCCAAGCCCGATGGGGAAGAGAAATATCTGCTGAAGAACGTGAAAAGATGATTGAAGAAGATTCAAAAGCCAAGATTGCCAGGCGTGCAAAACGAATTGAGCATAAGCTAGGCGTTGCCCAAGCTAAAAAGCTTAGAGCAGAGAGACTCCTATCCAAGATAGAATCGGCAATGCTTCCTGCAGGTCCTGATTACGATCAGGAAACCATCACTGATGAGGAGCGAGTTATGTTTCGCAAGGTTGGCTTAAGAATGAAAGCATACTTGCCTCTTGGCATACGTGGTGTCTTTGATGGTGTCATCGAAAACATGCATTTGCATTGGAAGCACAGAGAGCTAGTGAAATTAATATCCAAACAGAAGACCCTTGCTTTCGTTGAAGATTCAGCCAGGTTGTTGGAATATGAGAGCGGTGGCATACTGGTGGCTATAGAAAGAGTTCCCAAAGGATATGCTCTTATATACTATCGTGGAAAGAATTATAGGCGTCCCATTACCTTGAGGCCAAGGAACCTTTTAACTAAGGCAAAGGCATTGAAACGTTCAGTGGCCATGCAACGTCATGAGGCTCTCAGTCAGCACATAGGGGAATTGGAGAGGACCATAGAGCAAATGAGATCTGAAATTGGTATTTCTGAAGATGTAGAAAATGAGAGCACTTGGAGCTCAAGAAATCCCCATCAGAGTGGTCATGACTCAGAATTTAACCAAAGTGAGGATGAAGCTTCTGACATGGAGTCAGATGGTAGTGACGATGATGAAGGCTCAGATTGGGAAGATGAAGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000373 GO:0000375 GO:0000377 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0034641 GO:0043170 GO:0044237 GO:0044238 GO:0046483 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CRS1_YhbY

Protein Analysis

831

Amino Acids

93.13

Weight (kDa)

6.42

Isoelectric Point (pI)

57.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CRS1_YhbY	PF01985	230 - 312	4.6e-20	CRS1 / YhbY (CRM) domain
CRS1_YhbY	PF01985	427 - 511	1.7e-15	CRS1 / YhbY (CRM) domain
CRS1_YhbY	PF01985	638 - 725	1.1e-13	CRS1 / YhbY (CRM) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009432)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18390
fragaria_vesca	FvH4_5g12070 FvH4_5g12070 FvH4_5g12070 FvH4_5g12070
malus_domestica	MD06G1216600.v1.1 MD14G1227100.v1.1
prunus_persica	Prupe.5G221800_v2.0.a1
pyrus_communis	pycom06g19300 pycom14g18850
rosa_chinensis	RchiOBHm_Chr7g0185501
rosa_laevigata	RLG00000004907
rosa_multiflora	Rmu_sc0008223.1_g000008 Rmu_sc0010190.1_g000020 Rmu_sc0042727.1_g000001
rosa_roxburghii	Rroxscaffold_3G00268880
rosa_rugosa	Rorug06G0469800
rosa_samantha	Rh7AG072900 Rh7BG074700 Rh7CG074800 Rh7DG074700
rosa_wichuraiana	Rw7G006220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1877
AccB1I	GGYRCC	1 cut(s)	661
AccBSI	CCGCTC	4 cut(s)	55, 441, 489, 2115
AccII	CGCG	4 cut(s)	173, 227, 255, 374
AccIII	TCCGGA	1 cut(s)	466
AclI	AACGTT	1 cut(s)	2245
AclWI	GGATC	2 cut(s)	392, 749
AcoI	YGGCCR	2 cut(s)	533, 2253
AcsI	RAATTY	4 cut(s)	21, 1089, 1130, 2405
AcuI	CTGAAG	3 cut(s)	1493, 1758, 2361
AcyI	GRCGYC	2 cut(s)	662, 2191
AfaI	GTAC	3 cut(s)	347, 932, 1183
AfiI	CCNNNNNNNGG	9 cut(s)	231, 254, 283, 335, 758, 978, 1347, 1537, 2419
AflII	CTTAAG	1 cut(s)	1951
AhdI	GACNNNNNGTC	1 cut(s)	2440
AjiI	CACGTC	1 cut(s)	574
AjnI	CCWGG	2 cut(s)	1784, 2093
Alw21I	GWGCWC	5 cut(s)	156, 262, 649, 2363, 2372
Alw26I	GTCTC	1 cut(s)	1843
AlwI	GGATC	2 cut(s)	392, 749
AlwNI	CAGNNNCTG	1 cut(s)	1892
Ama87I	CYCGRG	1 cut(s)	1228
Aor13HI	TCCGGA	1 cut(s)	466
AoxI	GGCC	9 cut(s)	3, 176, 245, 364, 533, 952, 1704, 2207, 2253
ApeKI	GCWGC	6 cut(s)	514, 517, 580, 1562, 1565, 1643
ApoI	RAATTY	4 cut(s)	21, 1089, 1130, 2405
AseI	ATTAAT	1 cut(s)	2051
Asp700I	GAANNNNTTC	1 cut(s)	2142
AspA2I	CCTAGG	1 cut(s)	406
AspLEI	GCGC	5 cut(s)	229, 341, 374, 580, 664
AspS9I	GGNCC	8 cut(s)	246, 464, 529, 953, 1157, 1705, 1889, 2304
AsuC2I	CCSGG	3 cut(s)	760, 1229, 1230
AsuHPI	GGTGA	3 cut(s)	49, 455, 640
AvaI	CYCGRG	1 cut(s)	1228
AvaII	GGWCC	5 cut(s)	464, 529, 1157, 1889, 2304
AvrII	CCTAGG	1 cut(s)	406
AxyI	CCTNAGG	1 cut(s)	731
BalI	TGGCCA	1 cut(s)	2255
BanI	GGYRCC	1 cut(s)	661
BanII	GRGCYC	2 cut(s)	649, 2372
BbsI	GAAGAC	2 cut(s)	429, 2072
Bbv12I	GWGCWC	5 cut(s)	156, 262, 649, 2363, 2372
BbvCI	CCTCAGC	3 cut(s)	638, 701, 1464
BbvI	GCAGC	6 cut(s)	501, 529, 567, 1549, 1552, 1655
BccI	CCATC	7 cut(s)	440, 1368, 1710, 1919, 1991, 2391, 2441
BceAI	ACGGC	5 cut(s)	163, 172, 214, 568, 1292
BcgI	CGANNNNNNTGC	2 cut(s)	1632, 1666
BciT130I	CCWGG	2 cut(s)	1786, 2095
BciVI	GTATCC	1 cut(s)	1445
BcnI	CCSGG	3 cut(s)	760, 1229, 1230
BcoDI	GTCTC	1 cut(s)	1843
BfaI	CTAG	4 cut(s)	342, 407, 1814, 2042
BfmI	CTRYAG	3 cut(s)	515, 1884, 2133
BfoI	RGCGCY	3 cut(s)	342, 581, 665
BfrI	CTTAAG	1 cut(s)	1951
BfuAI	ACCTGC	1 cut(s)	1877
BfuI	GTATCC	1 cut(s)	1445
BglII	AGATCT	1 cut(s)	2321
BisI	GCNGC	9 cut(s)	160, 185, 483, 515, 518, 581, 1563, 1566, 1644
BlnI	CCTAGG	1 cut(s)	406
BlpI	GCTNAGC	1 cut(s)	675
BlsI	GCNGC	9 cut(s)	161, 186, 484, 516, 519, 582, 1564, 1567, 1645
Bme1390I	CCNGG	5 cut(s)	760, 1229, 1230, 1786, 2095
Bme18I	GGWCC	5 cut(s)	464, 529, 1157, 1889, 2304
BmeRI	GACNNNNNGTC	1 cut(s)	2440
BmeT110I	CYCGRG	1 cut(s)	1228
BmgBI	CACGTC	1 cut(s)	574
BmgT120I	GGNCC	8 cut(s)	246, 464, 529, 953, 1157, 1705, 1889, 2304
BmiI	GGNNCC	4 cut(s)	404, 530, 663, 2216
BmrFI	CCNGG	5 cut(s)	760, 1229, 1230, 1786, 2095
BmsI	GCATC	3 cut(s)	1257, 1382, 1630
BpiI	GAAGAC	2 cut(s)	429, 2072
BplI	GAGNNNNNCTC	2 cut(s)	631, 663
BpmI	CTGGAG	2 cut(s)	800, 1047
Bpu10I	CCTNAGC	3 cut(s)	638, 701, 1464
Bpu1102I	GCTNAGC	1 cut(s)	675
BpuEI	CTTGAG	4 cut(s)	107, 809, 2224, 2356
BpuMI	CCSGG	3 cut(s)	760, 1229, 1230
BsaAI	YACGTR	2 cut(s)	349, 1985
BsaBI	GATNNNNATC	2 cut(s)	1372, 1899
BsaHI	GRCGYC	2 cut(s)	662, 2191
BsaJI	CCNNGG	9 cut(s)	230, 309, 406, 584, 934, 1228, 1342, 1531, 2210
BsaWI	WCCGGW	3 cut(s)	393, 466, 1027
BsaXI	ACNNNNNCTCC	4 cut(s)	882, 912, 1045, 1075
Bsc4I	CCNNNNNNNGG	9 cut(s)	231, 254, 283, 335, 758, 978, 1347, 1537, 2419
Bse118I	RCCGGY	1 cut(s)	478
Bse1I	ACTGG	1 cut(s)	2130
Bse21I	CCTNAGG	1 cut(s)	731
Bse3DI	GCAATG	2 cut(s)	1051, 1881
Bse8I	GATNNNNATC	2 cut(s)	1372, 1899
BseAI	TCCGGA	1 cut(s)	466
BseBI	CCWGG	2 cut(s)	1786, 2095
BseDI	CCNNGG	9 cut(s)	230, 309, 406, 584, 934, 1228, 1342, 1531, 2210
BseGI	GGATG	8 cut(s)	117, 625, 697, 999, 1153, 1272, 1545, 2428
BseJI	GATNNNNATC	2 cut(s)	1372, 1899
BseLI	CCNNNNNNNGG	9 cut(s)	231, 254, 283, 335, 758, 978, 1347, 1537, 2419
BseMI	GCAATG	2 cut(s)	1051, 1881
BseNI	ACTGG	1 cut(s)	2130
BseX3I	CGGCCG	1 cut(s)	533
BseXI	GCAGC	6 cut(s)	501, 529, 567, 1549, 1552, 1655
BsgI	GTGCAG	1 cut(s)	1677
Bsh1236I	CGCG	4 cut(s)	173, 227, 255, 374
Bsh1285I	CGRYCG	1 cut(s)	536
BshFI	GGCC	9 cut(s)	5, 178, 247, 366, 535, 954, 1706, 2209, 2255
BshNI	GGYRCC	1 cut(s)	661
BsiEI	CGRYCG	1 cut(s)	536
BsiHKAI	GWGCWC	5 cut(s)	156, 262, 649, 2363, 2372
BsiHKCI	CYCGRG	1 cut(s)	1228
BsiSI	CCGG	8 cut(s)	394, 467, 479, 532, 536, 759, 1028, 1229
BslFI	GGGAC	2 cut(s)	82, 2178
BslI	CCNNNNNNNGG	9 cut(s)	231, 254, 283, 335, 758, 978, 1347, 1537, 2419
BsmAI	GTCTC	1 cut(s)	1843
BsmFI	GGGAC	2 cut(s)	82, 2178
BsnI	GGCC	9 cut(s)	5, 178, 247, 366, 535, 954, 1706, 2209, 2255
BsoBI	CYCGRG	1 cut(s)	1228
Bsp1286I	GDGCHC	5 cut(s)	156, 262, 649, 2363, 2372
Bsp13I	TCCGGA	1 cut(s)	466
Bsp143I	GATC	6 cut(s)	384, 741, 908, 1271, 1900, 2321
Bsp1720I	GCTNAGC	1 cut(s)	675
BspANI	GGCC	9 cut(s)	5, 178, 247, 366, 535, 954, 1706, 2209, 2255
BspEI	TCCGGA	1 cut(s)	466
BspFNI	CGCG	4 cut(s)	173, 227, 255, 374
BspHI	TCATGA	6 cut(s)	790, 832, 847, 865, 2266, 2395
BspLI	GGNNCC	4 cut(s)	404, 530, 663, 2216
BspMAI	CTGCAG	2 cut(s)	519, 1888
BspMI	ACCTGC	1 cut(s)	1877
BspPI	GGATC	2 cut(s)	392, 749
BspT107I	GGYRCC	1 cut(s)	661
BspTI	CTTAAG	1 cut(s)	1951
BsrBI	CCGCTC	4 cut(s)	55, 441, 489, 2115
BsrDI	GCAATG	2 cut(s)	1051, 1881
BsrFI	RCCGGY	1 cut(s)	478
BsrI	ACTGG	1 cut(s)	2130
BssAI	RCCGGY	1 cut(s)	478
BssECI	CCNNGG	9 cut(s)	230, 309, 406, 584, 934, 1228, 1342, 1531, 2210
BssMI	GATC	6 cut(s)	384, 741, 908, 1271, 1900, 2321
BssNI	GRCGYC	2 cut(s)	662, 2191
BssT1I	CCWWGG	4 cut(s)	309, 406, 1342, 2210
Bst2UI	CCWGG	2 cut(s)	1786, 2095
Bst4CI	ACNGT	4 cut(s)	108, 464, 935, 1532
Bst6I	CTCTTC	6 cut(s)	76, 95, 429, 1107, 1608, 1717
BstACI	GRCGYC	2 cut(s)	662, 2191
BstAFI	CTTAAG	1 cut(s)	1951
BstAPI	GCANNNNNTGC	1 cut(s)	775
BstBAI	YACGTR	2 cut(s)	349, 1985
BstC8I	GCNNGC	5 cut(s)	480, 487, 771, 1080, 1791
BstDSI	CCRYGG	4 cut(s)	230, 584, 934, 1531
BstF5I	GGATG	8 cut(s)	117, 625, 697, 999, 1153, 1272, 1545, 2428
BstFNI	CGCG	4 cut(s)	173, 227, 255, 374
BstH2I	RGCGCY	3 cut(s)	342, 581, 665
BstHHI	GCGC	5 cut(s)	229, 341, 374, 580, 664
BstKTI	GATC	6 cut(s)	387, 744, 911, 1274, 1903, 2324
BstMAI	GTCTC	1 cut(s)	1843
BstMBI	GATC	6 cut(s)	384, 741, 908, 1271, 1900, 2321
BstMCI	CGRYCG	1 cut(s)	536
BstNI	CCWGG	2 cut(s)	1786, 2095
BstNSI	RCATGY	1 cut(s)	2017
BstSCI	CCNGG	5 cut(s)	758, 1227, 1228, 1784, 2093
BstSFI	CTRYAG	3 cut(s)	515, 1884, 2133
BstUI	CGCG	4 cut(s)	173, 227, 255, 374
BstV1I	GCAGC	6 cut(s)	501, 529, 567, 1549, 1552, 1655
BstV2I	GAAGAC	2 cut(s)	429, 2072
BstX2I	RGATCY	1 cut(s)	2321
BstXI	CCANNNNNNTGG	2 cut(s)	2101, 2390
BstYI	RGATCY	1 cut(s)	2321
BstZI	CGGCCG	1 cut(s)	533
Bsu36I	CCTNAGG	1 cut(s)	731
BsuI	GTATCC	1 cut(s)	1445
BsuRI	GGCC	9 cut(s)	5, 178, 247, 366, 535, 954, 1706, 2209, 2255
BtgI	CCRYGG	4 cut(s)	230, 584, 934, 1531
BtrI	CACGTC	1 cut(s)	574
BtsCI	GGATG	8 cut(s)	117, 625, 697, 999, 1153, 1272, 1545, 2428
BtsIMutI	CAGTG	3 cut(s)	751, 1914, 2256
BveI	ACCTGC	1 cut(s)	1877
Cac8I	GCNNGC	5 cut(s)	480, 487, 771, 1080, 1791
CaiI	CAGNNNCTG	1 cut(s)	1892
CciI	TCATGA	6 cut(s)	790, 832, 847, 865, 2266, 2395
CfoI	GCGC	5 cut(s)	229, 341, 374, 580, 664
Cfr10I	RCCGGY	1 cut(s)	478
Cfr13I	GGNCC	8 cut(s)	246, 464, 529, 953, 1157, 1705, 1889, 2304
Cfr9I	CCCGGG	1 cut(s)	1228
CpoI	CGGWCCG	1 cut(s)	464
CseI	GACGC	3 cut(s)	869, 1211, 2180
Csp6I	GTAC	3 cut(s)	346, 931, 1182
CspCI	CAANNNNNGTGG	2 cut(s)	298, 333
CspI	CGGWCCG	1 cut(s)	464
CviQI	GTAC	3 cut(s)	346, 931, 1182
DinI	GGCGCC	1 cut(s)	663
DpnI	GATC	6 cut(s)	386, 743, 910, 1273, 1902, 2323
DpnII	GATC	6 cut(s)	384, 741, 908, 1271, 1900, 2321
DriI	GACNNNNNGTC	1 cut(s)	2440
EaeI	YGGCCR	2 cut(s)	533, 2253
EagI	CGGCCG	1 cut(s)	533
Eam1104I	CTCTTC	6 cut(s)	76, 95, 429, 1107, 1608, 1717
Eam1105I	GACNNNNNGTC	1 cut(s)	2440
EarI	CTCTTC	6 cut(s)	76, 95, 429, 1107, 1608, 1717
EciI	GGCGGA	1 cut(s)	566
Ecl136II	GAGCTC	2 cut(s)	647, 2370
EclXI	CGGCCG	1 cut(s)	533
Eco130I	CCWWGG	4 cut(s)	309, 406, 1342, 2210
Eco24I	GRGCYC	2 cut(s)	649, 2372
Eco47I	GGWCC	5 cut(s)	464, 529, 1157, 1889, 2304
Eco52I	CGGCCG	1 cut(s)	533
Eco53kI	GAGCTC	2 cut(s)	647, 2370
Eco57I	CTGAAG	3 cut(s)	1493, 1758, 2361
Eco81I	CCTNAGG	1 cut(s)	731
Eco88I	CYCGRG	1 cut(s)	1228
EcoICRI	GAGCTC	2 cut(s)	647, 2370
EcoO109I	RGGNCCY	3 cut(s)	953, 1157, 1889
EcoRI	GAATTC	1 cut(s)	1130
EcoRII	CCWGG	2 cut(s)	1784, 2093
EcoT14I	CCWWGG	4 cut(s)	309, 406, 1342, 2210
EcoT22I	ATGCAT	1 cut(s)	2019
EcoT38I	GRGCYC	2 cut(s)	649, 2372
EgeI	GGCGCC	1 cut(s)	663
EheI	GGCGCC	1 cut(s)	663
ErhI	CCWWGG	4 cut(s)	309, 406, 1342, 2210
FalI	AAGNNNNNCTT	2 cut(s)	1934, 1966
FaqI	GGGAC	2 cut(s)	82, 2178
FauI	CCCGC	3 cut(s)	60, 284, 513
Fnu4HI	GCNGC	9 cut(s)	160, 185, 483, 515, 518, 581, 1563, 1566, 1644
FokI	GGATG	8 cut(s)	104, 632, 704, 986, 1160, 1279, 1532, 2435
FriOI	GRGCYC	2 cut(s)	649, 2372
Fsp4HI	GCNGC	9 cut(s)	160, 185, 483, 515, 518, 581, 1563, 1566, 1644
FspBI	CTAG	4 cut(s)	342, 407, 1814, 2042
GlaI	GCGC	5 cut(s)	228, 340, 373, 579, 663
GluI	GCNGC	9 cut(s)	160, 185, 483, 515, 518, 581, 1563, 1566, 1644
GsuI	CTGGAG	2 cut(s)	800, 1047
HaeII	RGCGCY	3 cut(s)	342, 581, 665
HaeIII	GGCC	9 cut(s)	5, 178, 247, 366, 535, 954, 1706, 2209, 2255
HapII	CCGG	8 cut(s)	394, 467, 479, 532, 536, 759, 1028, 1229
HgaI	GACGC	3 cut(s)	869, 1211, 2180
HhaI	GCGC	5 cut(s)	229, 341, 374, 580, 664
Hin1I	GRCGYC	2 cut(s)	662, 2191
Hin6I	GCGC	5 cut(s)	227, 339, 372, 578, 662
HinP1I	GCGC	5 cut(s)	227, 339, 372, 578, 662
HincII	GTYRAC	2 cut(s)	289, 1201
HindII	GTYRAC	2 cut(s)	289, 1201
HindIII	AAGCTT	2 cut(s)	1835, 2427
HpaII	CCGG	8 cut(s)	394, 467, 479, 532, 536, 759, 1028, 1229
HphI	GGTGA	3 cut(s)	49, 455, 640
Hpy166II	GTNNAC	4 cut(s)	289, 352, 931, 1201
Hpy8I	GTNNAC	4 cut(s)	289, 352, 931, 1201
Hpy99I	CGWCG	7 cut(s)	184, 208, 268, 422, 431, 569, 885
HpyCH4III	ACNGT	4 cut(s)	108, 464, 935, 1532
HpyCH4IV	ACGT	6 cut(s)	348, 573, 1744, 1984, 2245, 2263
HpySE526I	ACGT	6 cut(s)	348, 573, 1744, 1984, 2245, 2263
Hsp92I	GRCGYC	2 cut(s)	662, 2191
HspAI	GCGC	5 cut(s)	227, 339, 372, 578, 662
KasI	GGCGCC	1 cut(s)	661
Kpn2I	TCCGGA	1 cut(s)	466
KroI	GCCGGC	1 cut(s)	478
KroNI	GCCGGC	1 cut(s)	480
Kzo9I	GATC	6 cut(s)	384, 741, 908, 1271, 1900, 2321
LmnI	GCTCC	6 cut(s)	265, 697, 811, 1468, 1924, 2367
Lsp1109I	GCAGC	6 cut(s)	501, 529, 567, 1549, 1552, 1655
LweI	GCATC	3 cut(s)	1257, 1382, 1630
MaeI	CTAG	4 cut(s)	342, 407, 1814, 2042
MaeII	ACGT	6 cut(s)	348, 573, 1744, 1984, 2245, 2263
MaeIII	GTNAC	5 cut(s)	1009, 1030, 1051, 1232, 2453
MalI	GATC	6 cut(s)	386, 743, 910, 1273, 1902, 2323
MbiI	CCGCTC	4 cut(s)	55, 441, 489, 2115
MboI	GATC	6 cut(s)	384, 741, 908, 1271, 1900, 2321
MflI	RGATCY	1 cut(s)	2321
MhlI	GDGCHC	5 cut(s)	156, 262, 649, 2363, 2372
MlsI	TGGCCA	1 cut(s)	2255
MluNI	TGGCCA	1 cut(s)	2255
Mly113I	GGCGCC	1 cut(s)	662
MlyI	GAGTC	5 cut(s)	306, 314, 1845, 2393, 2450
MmeI	TCCRAC	2 cut(s)	246, 2082
Mox20I	TGGCCA	1 cut(s)	2255
Mph1103I	ATGCAT	1 cut(s)	2019
MroI	TCCGGA	1 cut(s)	466
MroNI	GCCGGC	1 cut(s)	478
MroXI	GAANNNNTTC	1 cut(s)	2142
MscI	TGGCCA	1 cut(s)	2255
MseI	TTAA	8 cut(s)	942, 1386, 1481, 1952, 2051, 2222, 2409, 2491
MslI	CAYNNNNRTG	3 cut(s)	926, 2126, 2388
Msp20I	TGGCCA	1 cut(s)	2255
MspA1I	CMGCKG	2 cut(s)	520, 1019
MspCI	CTTAAG	1 cut(s)	1951
MspI	CCGG	8 cut(s)	394, 467, 479, 532, 536, 759, 1028, 1229
MspR9I	CCNGG	5 cut(s)	760, 1229, 1230, 1786, 2095
MvaI	CCWGG	2 cut(s)	1786, 2095
MvnI	CGCG	4 cut(s)	173, 227, 255, 374
NaeI	GCCGGC	1 cut(s)	480
NarI	GGCGCC	1 cut(s)	662
NciI	CCSGG	3 cut(s)	760, 1229, 1230
NdeII	GATC	6 cut(s)	384, 741, 908, 1271, 1900, 2321
NgoMIV	GCCGGC	1 cut(s)	478
NlaIV	GGNNCC	4 cut(s)	404, 530, 663, 2216
NmeAIII	GCCGAG	3 cut(s)	354, 483, 690
NmuCI	GTSAC	2 cut(s)	1051, 2453
NsiI	ATGCAT	1 cut(s)	2019
NspI	RCATGY	1 cut(s)	2017
PagI	TCATGA	6 cut(s)	790, 832, 847, 865, 2266, 2395
PcsI	WCGNNNNNNNCGW	2 cut(s)	426, 662
PdiI	GCCGGC	1 cut(s)	480
PdmI	GAANNNNTTC	1 cut(s)	2142
PfeI	GAWTC	5 cut(s)	470, 787, 1766, 1868, 2087
PkrI	GCNGC	9 cut(s)	161, 186, 484, 516, 519, 582, 1564, 1567, 1645
PleI	GAGTC	5 cut(s)	305, 313, 1845, 2393, 2449
PluTI	GGCGCC	1 cut(s)	665
PpsI	GAGTC	5 cut(s)	305, 313, 1845, 2393, 2449
Ppu21I	YACGTR	2 cut(s)	349, 1985
PpuMI	RGGWCCY	2 cut(s)	1157, 1889
PshBI	ATTAAT	1 cut(s)	2051
Psp124BI	GAGCTC	2 cut(s)	649, 2372
Psp1406I	AACGTT	1 cut(s)	2245
Psp5II	RGGWCCY	2 cut(s)	1157, 1889
Psp6I	CCWGG	2 cut(s)	1784, 2093
PspGI	CCWGG	2 cut(s)	1784, 2093
PspN4I	GGNNCC	4 cut(s)	404, 530, 663, 2216
PspPI	GGNCC	8 cut(s)	246, 464, 529, 953, 1157, 1705, 1889, 2304
PspPPI	RGGWCCY	2 cut(s)	1157, 1889
PstI	CTGCAG	2 cut(s)	519, 1888
PstNI	CAGNNNCTG	1 cut(s)	1892
PsuI	RGATCY	1 cut(s)	2321
PvuII	CAGCTG	1 cut(s)	1019
RsaI	GTAC	3 cut(s)	347, 932, 1183
RsaNI	GTAC	3 cut(s)	346, 931, 1182
RseI	CAYNNNNRTG	3 cut(s)	926, 2126, 2388
Rsr2I	CGGWCCG	1 cut(s)	464
RsrII	CGGWCCG	1 cut(s)	464
SacI	GAGCTC	2 cut(s)	649, 2372
SaqAI	TTAA	8 cut(s)	942, 1386, 1481, 1952, 2051, 2222, 2409, 2491
SatI	GCNGC	9 cut(s)	160, 185, 483, 515, 518, 581, 1563, 1566, 1644
Sau3AI	GATC	6 cut(s)	384, 741, 908, 1271, 1900, 2321
Sau96I	GGNCC	8 cut(s)	246, 464, 529, 953, 1157, 1705, 1889, 2304
SbfI	CCTGCAGG	1 cut(s)	1888
SchI	GAGTC	5 cut(s)	306, 314, 1845, 2393, 2450
ScrFI	CCNGG	5 cut(s)	760, 1229, 1230, 1786, 2095
SdaI	CCTGCAGG	1 cut(s)	1888
SduI	GDGCHC	5 cut(s)	156, 262, 649, 2363, 2372
SfaNI	GCATC	3 cut(s)	1257, 1382, 1630
SfcI	CTRYAG	3 cut(s)	515, 1884, 2133
SfoI	GGCGCC	1 cut(s)	663
SinI	GGWCC	5 cut(s)	464, 529, 1157, 1889, 2304
SmaI	CCCGGG	1 cut(s)	1230
SmiMI	CAYNNNNRTG	3 cut(s)	926, 2126, 2388
SmlI	CTYRAG	5 cut(s)	122, 824, 1951, 2203, 2371
SmoI	CTYRAG	5 cut(s)	122, 824, 1951, 2203, 2371
Sse8387I	CCTGCAGG	1 cut(s)	1888
SspDI	GGCGCC	1 cut(s)	661
SspI	AATATT	1 cut(s)	1514
SspMI	CTAG	4 cut(s)	342, 407, 1814, 2042
SstI	GAGCTC	2 cut(s)	649, 2372
StyD4I	CCNGG	5 cut(s)	758, 1227, 1228, 1784, 2093
StyI	CCWWGG	4 cut(s)	309, 406, 1342, 2210
TaaI	ACNGT	4 cut(s)	108, 464, 935, 1532
TaiI	ACGT	6 cut(s)	351, 576, 1747, 1987, 2248, 2266
TaqI	TCGA	3 cut(s)	656, 883, 2007
TauI	GCSGC	3 cut(s)	162, 187, 485
TfiI	GAWTC	5 cut(s)	470, 787, 1766, 1868, 2087
Tru1I	TTAA	8 cut(s)	942, 1386, 1481, 1952, 2051, 2222, 2409, 2491
Tru9I	TTAA	8 cut(s)	942, 1386, 1481, 1952, 2051, 2222, 2409, 2491
TscAI	CASTG	3 cut(s)	751, 1921, 2256
TseFI	GTSAC	2 cut(s)	1051, 2453
TseI	GCWGC	6 cut(s)	514, 517, 580, 1562, 1565, 1643
Tsp45I	GTSAC	2 cut(s)	1051, 2453
TspDTI	ATGAA	9 cut(s)	779, 821, 869, 988, 1164, 1534, 1973, 2439, 2478
TspGWI	ACGGA	3 cut(s)	252, 1130, 1321
TspMI	CCCGGG	1 cut(s)	1228
TspRI	CASTG	3 cut(s)	751, 1921, 2256
Vha464I	CTTAAG	1 cut(s)	1951
VpaK11BI	GGWCC	5 cut(s)	464, 529, 1157, 1889, 2304
VspI	ATTAAT	1 cut(s)	2051
XapI	RAATTY	4 cut(s)	21, 1089, 1130, 2405
XceI	RCATGY	1 cut(s)	2017
XmaI	CCCGGG	1 cut(s)	1228
XmaJI	CCTAGG	1 cut(s)	406
XmnI	GAANNNNTTC	1 cut(s)	2142
XspI	CTAG	4 cut(s)	342, 407, 1814, 2042
Zsp2I	ATGCAT	1 cut(s)	2019

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.