Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0009432

Physical Location & Seq

Genomic Coordinates Forward (+)

61898106 .. 61904563

Gene Structure 6458 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00268880.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2061 bp

ATGGTGTTGAATTGGACGGTCCGGATTCAATGCCGGCGGCGAGCGGAGAGGAGAAGCTCGGCGATTTGCTGCAGCGGGAGTGGGTCCGGCCGGACTATATATTGGCGGAGGAGAAGGGCGACGATCACGTGGGCGCTGCCGTGGGAGAAGGAGGAGGAGGAGGAATTGAGTGAGGATGAGGAGGTGAAGGGGCTGAGGAGAGTTCGGAGGTCGAAGGCGCCGAGCTTGGCTGAGCTGACGATTGAGGATGAGGAGCTGAGGCGATTGAGGAGGTTGGGGATGTTCCTGAGGGAGAGGATCAGTGTGCCGAAAGCCGGGATTACGCAGGCTGTGCTGGAGAAGATTCATGATAAGTGGAGGAAGGAGGAGCTGGTGAGGCTCAAGTTTCATGAGGTTTTGGCTCATGATATGAAAACTGCTCATGAGATTGTTGAGCGTCGAACAGGAGGTTTAGTTTTATGGAGATCAGGGAGTGTCATGGTCGTGTACCGTGGGATTAACTACAAAGGCCCTTCTAAATCCGAACCTGTTGGTAGGGAAGGAAATGCTCTTTTCATCCCAGATGTTTCATCAGCTGAAACTCCGGTAACAAGAAGTGGCAATGATGTGACTTCAACTCCAGATAAGACTGAGCAAGCTGTGAAAATTCCAGCACCTCTTCCCAAGATGACAGAGGAAGAAGCTGAATTCAACAGCTTATTGGATGAATTAGGTCCTCGTTTTGTTGAGTATTGGGGTACAGGAATACTTCCTGTTGACGCTGATTTACTTCCTAAAACAATCCCGGGTTACAAAACACCTTTCAGGCTTCTTCCTACCGGGATGCGATCACGGCTGACTAATGCAGAGATGACTAATTTACGGAAACTTGCTAAATCAATTCCATGTCATTTTGCCCTTGGGAGAAATAGAAACCATCAAGGATTAGCATCTGCTATACTTAAAGTTTGGGAGAAAAGTTCTGTGGCGAAGATTGCTGTCAAACGAGGTATCCAGAATACAAACAACAAAATAATGGCTGAGGAGCTGAAGGCATTAACAGGTGGTGTTTTACTACTCAGAAACAAATATTACATTGTCATTTACCGTGGAAAGGACTTTATCCCAACAAGTGTAGCTACTGCTCTAGCTGAAAGACAGGAACTAACGAAACAGGTTCAAGATGTTGAAGAGATAGTGCGTGTCAAACCAATAGATGCAGCTTCTTCAGGTGCAGAGGAAGGACAGGCACTTGCAGGAACTTTGGCAGAGTTCTACGAGGCCCAAGCCCGATGGGGAAGAGAAATATCTGCTGAAGAACGTGAAAAGATGATTGAAGAAGATTCAAAAGCTAAGATTGCCAGGCGTGCAAAACGAATTGAACATAAGCTAGGTGTTGCCCAAGCTAAAAAGCTTAGAGCAGAGAGACTCCTATCCAAGATAGAATCGGCAATGCTTCCTGCAGGTCCTGATTACGATCAGGAAACCATCACTGATGAGGAGCGAGTTATGTTTCGCAAGGTTGGCTTAAGAATGAAAGCATACTTGCCTCTTGGCATACGTGGTGTCTTTGATGGTGTCATCGAGAACATGCATTTGCATTGGAAGCACAGAGAGCTAGTGAAATTAATATCCAAACAGAAGACCCTTGCTTTCGTTGAAGATTCAGCTAGGTTGTTGGAATATGAGAGCGGTGGCATACTGGTGGCTATAGAAAGAGTTCCCAAAGGATATGCTCTTATATACTATCGTGGAAAGAATTATAGGCGTCCCATTACCTTGAGGCCAAGGAACCTTTTAACTAAGGCGAAGGCATTGAAACGTTCAGTGGCCATGCAACGCCATGAGGCTCTTAGTCAGCACATAGGGGAATTGGAGAGGACCATAGAGCAAATGAGATCTGAAATTCTTTCCAAGCAGGGTATTTCTGAAGATGTAGAAAATGAGAGCACTTGGAGCTCAAGAAATCCCCATCAGAGTGGTCATGACTCGGAATTTAACCAAAGTGAGGATGAAGCTTCTGACATGGAATCAGATGGTAGTGACGATGATGAAGGCTCAGATTGGGAAGATGAAGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000373 GO:0000375 GO:0000377 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0034641 GO:0043170 GO:0044237 GO:0044238 GO:0046483 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CRS1_YhbY

Protein Analysis

686

Amino Acids

78.04

Weight (kDa)

8.94

Isoelectric Point (pI)

57.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CRS1_YhbY	PF01985	82 - 164	3.5e-20	CRS1 / YhbY (CRM) domain
CRS1_YhbY	PF01985	279 - 363	1.3e-15	CRS1 / YhbY (CRM) domain
CRS1_YhbY	PF01985	490 - 577	8.8e-14	CRS1 / YhbY (CRM) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009432)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18390
fragaria_vesca	FvH4_5g12070 FvH4_5g12070 FvH4_5g12070 FvH4_5g12070
malus_domestica	MD06G1216600.v1.1 MD14G1227100.v1.1
prunus_persica	Prupe.5G221800_v2.0.a1
pyrus_communis	pycom06g19300 pycom14g18850
rosa_chinensis	RchiOBHm_Chr7g0185501
rosa_laevigata	RLG00000004907
rosa_multiflora	Rmu_sc0008223.1_g000008 Rmu_sc0010190.1_g000020 Rmu_sc0042727.1_g000001
rosa_roxburghii	Rroxscaffold_3G00268880
rosa_rugosa	Rorug06G0469800
rosa_samantha	Rh7AG072900 Rh7BG074700 Rh7CG074800 Rh7DG074700
rosa_wichuraiana	Rw7G006220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1433
AccB1I	GGYRCC	1 cut(s)	217
AccBSI	CCGCTC	2 cut(s)	44, 1671
AccIII	TCCGGA	1 cut(s)	21
AciI	CCGC	5 cut(s)	37, 44, 75, 106, 1671
AclI	AACGTT	1 cut(s)	1801
AclWI	GGATC	1 cut(s)	305
AcoI	YGGCCR	2 cut(s)	88, 1809
AcsI	RAATTY	4 cut(s)	645, 686, 1884, 1973
AcuI	CTGAAG	4 cut(s)	1049, 1191, 1314, 1929
AcvI	CACGTG	1 cut(s)	129
AcyI	GRCGYC	2 cut(s)	218, 1747
AfaI	GTAC	2 cut(s)	488, 739
AfiI	CCNNNNNNNGG	3 cut(s)	314, 1093, 1987
AflII	CTTAAG	1 cut(s)	1507
AjnI	CCWGG	1 cut(s)	1340
Alw21I	GWGCWC	2 cut(s)	1931, 1940
Alw26I	GTCTC	1 cut(s)	1399
AlwI	GGATC	1 cut(s)	305
AlwNI	CAGNNNCTG	1 cut(s)	1448
Ama87I	CYCGRG	1 cut(s)	784
Aor13HI	TCCGGA	1 cut(s)	21
AoxI	GGCC	5 cut(s)	88, 508, 1260, 1763, 1809
ApeKI	GCWGC	4 cut(s)	69, 72, 136, 1199
ApoI	RAATTY	4 cut(s)	645, 686, 1884, 1973
AseI	ATTAAT	1 cut(s)	1607
Asp700I	GAANNNNTTC	1 cut(s)	1698
AspLEI	GCGC	2 cut(s)	136, 220
AspS9I	GGNCC	7 cut(s)	19, 84, 509, 713, 1261, 1445, 1860
AsuC2I	CCSGG	4 cut(s)	316, 785, 786, 820
AsuHPI	GGTGA	2 cut(s)	196, 385
AvaI	CYCGRG	1 cut(s)	784
AvaII	GGWCC	5 cut(s)	19, 84, 713, 1445, 1860
AxyI	CCTNAGG	1 cut(s)	287
BalI	TGGCCA	1 cut(s)	1811
BanI	GGYRCC	1 cut(s)	217
BanII	GRGCYC	1 cut(s)	1940
BbrPI	CACGTG	1 cut(s)	129
BbsI	GAAGAC	1 cut(s)	1628
Bbv12I	GWGCWC	2 cut(s)	1931, 1940
BbvCI	CCTCAGC	3 cut(s)	194, 257, 1020
BbvI	GCAGC	4 cut(s)	56, 84, 123, 1211
BccI	CCATC	6 cut(s)	924, 1266, 1475, 1547, 1959, 2009
BceAI	ACGGC	2 cut(s)	124, 848
BciT130I	CCWGG	1 cut(s)	1342
BciVI	GTATCC	1 cut(s)	1001
BcnI	CCSGG	4 cut(s)	316, 785, 786, 820
BcoDI	GTCTC	1 cut(s)	1399
BfaI	CTAG	4 cut(s)	1127, 1370, 1598, 1650
BfmI	CTRYAG	3 cut(s)	70, 1440, 1689
BfoI	RGCGCY	2 cut(s)	137, 221
BfrI	CTTAAG	1 cut(s)	1507
BfuAI	ACCTGC	1 cut(s)	1433
BfuI	GTATCC	1 cut(s)	1001
BglII	AGATCT	1 cut(s)	1877
BisI	GCNGC	5 cut(s)	38, 70, 73, 137, 1200
BlpI	GCTNAGC	1 cut(s)	231
BlsI	GCNGC	5 cut(s)	39, 71, 74, 138, 1201
Bme1390I	CCNGG	5 cut(s)	316, 785, 786, 820, 1342
Bme18I	GGWCC	5 cut(s)	19, 84, 713, 1445, 1860
BmeT110I	CYCGRG	1 cut(s)	784
BmgT120I	GGNCC	7 cut(s)	19, 84, 509, 713, 1261, 1445, 1860
BmiI	GGNNCC	3 cut(s)	85, 219, 1772
BmrFI	CCNGG	5 cut(s)	316, 785, 786, 820, 1342
BmsI	GCATC	3 cut(s)	813, 938, 1186
BpiI	GAAGAC	1 cut(s)	1628
BpmI	CTGGAG	2 cut(s)	356, 603
Bpu10I	CCTNAGC	3 cut(s)	194, 257, 1020
Bpu1102I	GCTNAGC	1 cut(s)	231
BpuEI	CTTGAG	3 cut(s)	365, 1780, 1924
BpuMI	CCSGG	4 cut(s)	316, 785, 786, 820
BsaAI	YACGTR	2 cut(s)	129, 1541
BsaBI	GATNNNNATC	2 cut(s)	928, 1455
BsaHI	GRCGYC	2 cut(s)	218, 1747
BsaJI	CCNNGG	6 cut(s)	140, 490, 784, 898, 1087, 1766
BsaWI	WCCGGW	2 cut(s)	21, 583
BsaXI	ACNNNNNCTCC	4 cut(s)	438, 468, 601, 631
Bsc4I	CCNNNNNNNGG	3 cut(s)	314, 1093, 1987
Bse118I	RCCGGY	1 cut(s)	33
Bse1I	ACTGG	1 cut(s)	1686
Bse21I	CCTNAGG	1 cut(s)	287
Bse3DI	GCAATG	2 cut(s)	607, 1437
Bse8I	GATNNNNATC	2 cut(s)	928, 1455
BseAI	TCCGGA	1 cut(s)	21
BseBI	CCWGG	1 cut(s)	1342
BseDI	CCNNGG	6 cut(s)	140, 490, 784, 898, 1087, 1766
BseGI	GGATG	7 cut(s)	181, 253, 285, 555, 709, 828, 1996
BseJI	GATNNNNATC	2 cut(s)	928, 1455
BseLI	CCNNNNNNNGG	3 cut(s)	314, 1093, 1987
BseMI	GCAATG	2 cut(s)	607, 1437
BseMII	CTCAG	8 cut(s)	185, 222, 248, 278, 621, 1011, 1072, 2052
BseNI	ACTGG	1 cut(s)	1686
BseX3I	CGGCCG	1 cut(s)	88
BseXI	GCAGC	4 cut(s)	56, 84, 123, 1211
BsgI	GTGCAG	1 cut(s)	1233
Bsh1285I	CGRYCG	1 cut(s)	91
BshFI	GGCC	5 cut(s)	90, 510, 1262, 1765, 1811
BshNI	GGYRCC	1 cut(s)	217
BsiEI	CGRYCG	1 cut(s)	91
BsiHKAI	GWGCWC	2 cut(s)	1931, 1940
BsiHKCI	CYCGRG	1 cut(s)	784
BsiSI	CCGG	8 cut(s)	22, 34, 87, 91, 315, 584, 785, 819
BslFI	GGGAC	1 cut(s)	1734
BslI	CCNNNNNNNGG	3 cut(s)	314, 1093, 1987
BsmAI	GTCTC	1 cut(s)	1399
BsmFI	GGGAC	1 cut(s)	1734
BsnI	GGCC	5 cut(s)	90, 510, 1262, 1765, 1811
BsoBI	CYCGRG	1 cut(s)	784
Bsp1286I	GDGCHC	2 cut(s)	1931, 1940
Bsp13I	TCCGGA	1 cut(s)	21
Bsp143I	GATC	6 cut(s)	123, 297, 464, 827, 1456, 1877
Bsp1720I	GCTNAGC	1 cut(s)	231
BspACI	CCGC	5 cut(s)	37, 44, 75, 106, 1671
BspANI	GGCC	5 cut(s)	90, 510, 1262, 1765, 1811
BspCNI	CTCAG	8 cut(s)	186, 223, 249, 279, 622, 1012, 1071, 2051
BspEI	TCCGGA	1 cut(s)	21
BspHI	TCATGA	5 cut(s)	346, 388, 403, 421, 1963
BspLI	GGNNCC	3 cut(s)	85, 219, 1772
BspMAI	CTGCAG	2 cut(s)	74, 1444
BspMI	ACCTGC	1 cut(s)	1433
BspPI	GGATC	1 cut(s)	305
BspT107I	GGYRCC	1 cut(s)	217
BspTI	CTTAAG	1 cut(s)	1507
BsrBI	CCGCTC	2 cut(s)	44, 1671
BsrDI	GCAATG	2 cut(s)	607, 1437
BsrFI	RCCGGY	1 cut(s)	33
BsrI	ACTGG	1 cut(s)	1686
BssAI	RCCGGY	1 cut(s)	33
BssECI	CCNNGG	6 cut(s)	140, 490, 784, 898, 1087, 1766
BssMI	GATC	6 cut(s)	123, 297, 464, 827, 1456, 1877
BssNI	GRCGYC	2 cut(s)	218, 1747
BssT1I	CCWWGG	2 cut(s)	898, 1766
Bst2UI	CCWGG	1 cut(s)	1342
Bst4CI	ACNGT	3 cut(s)	19, 491, 1088
Bst6I	CTCTTC	3 cut(s)	663, 1164, 1273
BstACI	GRCGYC	2 cut(s)	218, 1747
BstAFI	CTTAAG	1 cut(s)	1507
BstAPI	GCANNNNNTGC	1 cut(s)	331
BstBAI	YACGTR	2 cut(s)	129, 1541
BstC8I	GCNNGC	5 cut(s)	35, 42, 327, 636, 1347
BstDSI	CCRYGG	3 cut(s)	140, 490, 1087
BstF5I	GGATG	7 cut(s)	181, 253, 285, 555, 709, 828, 1996
BstH2I	RGCGCY	2 cut(s)	137, 221
BstHHI	GCGC	2 cut(s)	136, 220
BstKTI	GATC	6 cut(s)	126, 300, 467, 830, 1459, 1880
BstMAI	GTCTC	1 cut(s)	1399
BstMBI	GATC	6 cut(s)	123, 297, 464, 827, 1456, 1877
BstMCI	CGRYCG	1 cut(s)	91
BstNI	CCWGG	1 cut(s)	1342
BstNSI	RCATGY	1 cut(s)	1573
BstSCI	CCNGG	5 cut(s)	314, 783, 784, 818, 1340
BstSFI	CTRYAG	3 cut(s)	70, 1440, 1689
BstV1I	GCAGC	4 cut(s)	56, 84, 123, 1211
BstV2I	GAAGAC	1 cut(s)	1628
BstX2I	RGATCY	1 cut(s)	1877
BstXI	CCANNNNNNTGG	1 cut(s)	1958
BstYI	RGATCY	1 cut(s)	1877
BstZI	CGGCCG	1 cut(s)	88
Bsu36I	CCTNAGG	1 cut(s)	287
BsuI	GTATCC	1 cut(s)	1001
BsuRI	GGCC	5 cut(s)	90, 510, 1262, 1765, 1811
BtgI	CCRYGG	3 cut(s)	140, 490, 1087
BtsCI	GGATG	7 cut(s)	181, 253, 285, 555, 709, 828, 1996
BtsIMutI	CAGTG	3 cut(s)	307, 1470, 1812
BveI	ACCTGC	1 cut(s)	1433
Cac8I	GCNNGC	5 cut(s)	35, 42, 327, 636, 1347
CaiI	CAGNNNCTG	1 cut(s)	1448
CciI	TCATGA	5 cut(s)	346, 388, 403, 421, 1963
CfoI	GCGC	2 cut(s)	136, 220
Cfr10I	RCCGGY	1 cut(s)	33
Cfr13I	GGNCC	7 cut(s)	19, 84, 509, 713, 1261, 1445, 1860
Cfr9I	CCCGGG	1 cut(s)	784
CpoI	CGGWCCG	1 cut(s)	19
CseI	GACGC	3 cut(s)	425, 767, 1736
Csp6I	GTAC	2 cut(s)	487, 738
CspI	CGGWCCG	1 cut(s)	19
CviQI	GTAC	2 cut(s)	487, 738
DinI	GGCGCC	1 cut(s)	219
DpnI	GATC	6 cut(s)	125, 299, 466, 829, 1458, 1879
DpnII	GATC	6 cut(s)	123, 297, 464, 827, 1456, 1877
EaeI	YGGCCR	2 cut(s)	88, 1809
EagI	CGGCCG	1 cut(s)	88
Eam1104I	CTCTTC	3 cut(s)	663, 1164, 1273
EarI	CTCTTC	3 cut(s)	663, 1164, 1273
EciI	GGCGGA	1 cut(s)	121
Ecl136II	GAGCTC	1 cut(s)	1938
EclXI	CGGCCG	1 cut(s)	88
Eco130I	CCWWGG	2 cut(s)	898, 1766
Eco24I	GRGCYC	1 cut(s)	1940
Eco47I	GGWCC	5 cut(s)	19, 84, 713, 1445, 1860
Eco52I	CGGCCG	1 cut(s)	88
Eco53kI	GAGCTC	1 cut(s)	1938
Eco57I	CTGAAG	4 cut(s)	1049, 1191, 1314, 1929
Eco72I	CACGTG	1 cut(s)	129
Eco81I	CCTNAGG	1 cut(s)	287
Eco88I	CYCGRG	1 cut(s)	784
EcoICRI	GAGCTC	1 cut(s)	1938
EcoO109I	RGGNCCY	3 cut(s)	509, 713, 1445
EcoRI	GAATTC	1 cut(s)	686
EcoRII	CCWGG	1 cut(s)	1340
EcoT14I	CCWWGG	2 cut(s)	898, 1766
EcoT22I	ATGCAT	1 cut(s)	1575
EcoT38I	GRGCYC	1 cut(s)	1940
EgeI	GGCGCC	1 cut(s)	219
EheI	GGCGCC	1 cut(s)	219
ErhI	CCWWGG	2 cut(s)	898, 1766
FalI	AAGNNNNNCTT	2 cut(s)	1490, 1522
FaqI	GGGAC	1 cut(s)	1734
FauI	CCCGC	1 cut(s)	68
Fnu4HI	GCNGC	5 cut(s)	38, 70, 73, 137, 1200
FokI	GGATG	7 cut(s)	188, 260, 292, 542, 716, 835, 2003
FriOI	GRGCYC	1 cut(s)	1940
Fsp4HI	GCNGC	5 cut(s)	38, 70, 73, 137, 1200
FspBI	CTAG	4 cut(s)	1127, 1370, 1598, 1650
GlaI	GCGC	2 cut(s)	135, 219
GluI	GCNGC	5 cut(s)	38, 70, 73, 137, 1200
GsuI	CTGGAG	2 cut(s)	356, 603
HaeII	RGCGCY	2 cut(s)	137, 221
HaeIII	GGCC	5 cut(s)	90, 510, 1262, 1765, 1811
HapII	CCGG	8 cut(s)	22, 34, 87, 91, 315, 584, 785, 819
HgaI	GACGC	3 cut(s)	425, 767, 1736
HhaI	GCGC	2 cut(s)	136, 220
Hin1I	GRCGYC	2 cut(s)	218, 1747
Hin6I	GCGC	2 cut(s)	134, 218
HinP1I	GCGC	2 cut(s)	134, 218
HincII	GTYRAC	1 cut(s)	757
HindII	GTYRAC	1 cut(s)	757
HindIII	AAGCTT	2 cut(s)	1391, 1995
HinfI	GANTC	8 cut(s)	25, 343, 1322, 1407, 1424, 1643, 1967, 2009
HpaII	CCGG	8 cut(s)	22, 34, 87, 91, 315, 584, 785, 819
HphI	GGTGA	2 cut(s)	196, 385
Hpy166II	GTNNAC	2 cut(s)	487, 757
Hpy8I	GTNNAC	2 cut(s)	487, 757
Hpy99I	CGWCG	2 cut(s)	124, 441
HpyCH4III	ACNGT	3 cut(s)	19, 491, 1088
HpyCH4IV	ACGT	4 cut(s)	128, 1300, 1540, 1801
HpySE526I	ACGT	4 cut(s)	128, 1300, 1540, 1801
Hsp92I	GRCGYC	2 cut(s)	218, 1747
HspAI	GCGC	2 cut(s)	134, 218
KasI	GGCGCC	1 cut(s)	217
Kpn2I	TCCGGA	1 cut(s)	21
KroI	GCCGGC	1 cut(s)	33
KroNI	GCCGGC	1 cut(s)	35
Kzo9I	GATC	6 cut(s)	123, 297, 464, 827, 1456, 1877
LmnI	GCTCC	5 cut(s)	253, 367, 1024, 1480, 1935
Lsp1109I	GCAGC	4 cut(s)	56, 84, 123, 1211
LweI	GCATC	3 cut(s)	813, 938, 1186
MaeI	CTAG	4 cut(s)	1127, 1370, 1598, 1650
MaeII	ACGT	4 cut(s)	128, 1300, 1540, 1801
MaeIII	GTNAC	4 cut(s)	586, 607, 788, 2021
MalI	GATC	6 cut(s)	125, 299, 466, 829, 1458, 1879
MbiI	CCGCTC	2 cut(s)	44, 1671
MboI	GATC	6 cut(s)	123, 297, 464, 827, 1456, 1877
MflI	RGATCY	1 cut(s)	1877
MhlI	GDGCHC	2 cut(s)	1931, 1940
MlsI	TGGCCA	1 cut(s)	1811
MluNI	TGGCCA	1 cut(s)	1811
Mly113I	GGCGCC	1 cut(s)	218
MlyI	GAGTC	2 cut(s)	1401, 1961
MmeI	TCCRAC	1 cut(s)	1638
Mox20I	TGGCCA	1 cut(s)	1811
Mph1103I	ATGCAT	1 cut(s)	1575
MroI	TCCGGA	1 cut(s)	21
MroNI	GCCGGC	1 cut(s)	33
MroXI	GAANNNNTTC	1 cut(s)	1698
MscI	TGGCCA	1 cut(s)	1811
MseI	TTAA	8 cut(s)	498, 942, 1037, 1508, 1607, 1778, 1977, 2059
MslI	CAYNNNNRTG	3 cut(s)	482, 1682, 1956
Msp20I	TGGCCA	1 cut(s)	1811
MspA1I	CMGCKG	2 cut(s)	75, 575
MspCI	CTTAAG	1 cut(s)	1507
MspI	CCGG	8 cut(s)	22, 34, 87, 91, 315, 584, 785, 819
MspR9I	CCNGG	5 cut(s)	316, 785, 786, 820, 1342
MvaI	CCWGG	1 cut(s)	1342
NaeI	GCCGGC	1 cut(s)	35
NarI	GGCGCC	1 cut(s)	218
NciI	CCSGG	4 cut(s)	316, 785, 786, 820
NdeII	GATC	6 cut(s)	123, 297, 464, 827, 1456, 1877
NgoMIV	GCCGGC	1 cut(s)	33
NlaIV	GGNNCC	3 cut(s)	85, 219, 1772
NmeAIII	GCCGAG	2 cut(s)	38, 246
NmuCI	GTSAC	2 cut(s)	607, 2021
NsiI	ATGCAT	1 cut(s)	1575
NspI	RCATGY	1 cut(s)	1573
PagI	TCATGA	5 cut(s)	346, 388, 403, 421, 1963
PcsI	WCGNNNNNNNCGW	1 cut(s)	218
PdiI	GCCGGC	1 cut(s)	35
PdmI	GAANNNNTTC	1 cut(s)	1698
PfeI	GAWTC	6 cut(s)	25, 343, 1322, 1424, 1643, 2009
PkrI	GCNGC	5 cut(s)	39, 71, 74, 138, 1201
PleI	GAGTC	2 cut(s)	1401, 1961
PluTI	GGCGCC	1 cut(s)	221
PmaCI	CACGTG	1 cut(s)	129
PmlI	CACGTG	1 cut(s)	129
PpsI	GAGTC	2 cut(s)	1401, 1961
Ppu21I	YACGTR	2 cut(s)	129, 1541
PpuMI	RGGWCCY	2 cut(s)	713, 1445
PshBI	ATTAAT	1 cut(s)	1607
Psp124BI	GAGCTC	1 cut(s)	1940
Psp1406I	AACGTT	1 cut(s)	1801
Psp5II	RGGWCCY	2 cut(s)	713, 1445
Psp6I	CCWGG	1 cut(s)	1340
PspCI	CACGTG	1 cut(s)	129
PspGI	CCWGG	1 cut(s)	1340
PspN4I	GGNNCC	3 cut(s)	85, 219, 1772
PspPI	GGNCC	7 cut(s)	19, 84, 509, 713, 1261, 1445, 1860
PspPPI	RGGWCCY	2 cut(s)	713, 1445
PstI	CTGCAG	2 cut(s)	74, 1444
PstNI	CAGNNNCTG	1 cut(s)	1448
PsuI	RGATCY	1 cut(s)	1877
PvuII	CAGCTG	1 cut(s)	575
RsaI	GTAC	2 cut(s)	488, 739
RsaNI	GTAC	2 cut(s)	487, 738
RseI	CAYNNNNRTG	3 cut(s)	482, 1682, 1956
Rsr2I	CGGWCCG	1 cut(s)	19
RsrII	CGGWCCG	1 cut(s)	19
SacI	GAGCTC	1 cut(s)	1940
SaqAI	TTAA	8 cut(s)	498, 942, 1037, 1508, 1607, 1778, 1977, 2059
SatI	GCNGC	5 cut(s)	38, 70, 73, 137, 1200
Sau3AI	GATC	6 cut(s)	123, 297, 464, 827, 1456, 1877
Sau96I	GGNCC	7 cut(s)	19, 84, 509, 713, 1261, 1445, 1860
SbfI	CCTGCAGG	1 cut(s)	1444
SchI	GAGTC	2 cut(s)	1401, 1961
ScrFI	CCNGG	5 cut(s)	316, 785, 786, 820, 1342
SdaI	CCTGCAGG	1 cut(s)	1444
SduI	GDGCHC	2 cut(s)	1931, 1940
SfaNI	GCATC	3 cut(s)	813, 938, 1186
SfcI	CTRYAG	3 cut(s)	70, 1440, 1689
SfoI	GGCGCC	1 cut(s)	219
SinI	GGWCC	5 cut(s)	19, 84, 713, 1445, 1860
SmaI	CCCGGG	1 cut(s)	786
SmiMI	CAYNNNNRTG	3 cut(s)	482, 1682, 1956
SmlI	CTYRAG	4 cut(s)	380, 1507, 1759, 1939
SmoI	CTYRAG	4 cut(s)	380, 1507, 1759, 1939
Sse8387I	CCTGCAGG	1 cut(s)	1444
SsiI	CCGC	5 cut(s)	37, 44, 75, 106, 1671
SspDI	GGCGCC	1 cut(s)	217
SspI	AATATT	1 cut(s)	1070
SspMI	CTAG	4 cut(s)	1127, 1370, 1598, 1650
SstI	GAGCTC	1 cut(s)	1940
StyD4I	CCNGG	5 cut(s)	314, 783, 784, 818, 1340
StyI	CCWWGG	2 cut(s)	898, 1766
TaaI	ACNGT	3 cut(s)	19, 491, 1088
TaiI	ACGT	4 cut(s)	131, 1303, 1543, 1804
TaqI	TCGA	3 cut(s)	212, 439, 1563
TauI	GCSGC	1 cut(s)	40
TfiI	GAWTC	6 cut(s)	25, 343, 1322, 1424, 1643, 2009
Tru1I	TTAA	8 cut(s)	498, 942, 1037, 1508, 1607, 1778, 1977, 2059
Tru9I	TTAA	8 cut(s)	498, 942, 1037, 1508, 1607, 1778, 1977, 2059
TscAI	CASTG	3 cut(s)	307, 1477, 1812
TseFI	GTSAC	2 cut(s)	607, 2021
TseI	GCWGC	4 cut(s)	69, 72, 136, 1199
Tsp45I	GTSAC	2 cut(s)	607, 2021
TspDTI	ATGAA	9 cut(s)	335, 377, 425, 544, 558, 720, 1529, 2007, 2046
TspGWI	ACGGA	1 cut(s)	877
TspMI	CCCGGG	1 cut(s)	784
TspRI	CASTG	3 cut(s)	307, 1477, 1812
Vha464I	CTTAAG	1 cut(s)	1507
VpaK11BI	GGWCC	5 cut(s)	19, 84, 713, 1445, 1860
VspI	ATTAAT	1 cut(s)	1607
XapI	RAATTY	4 cut(s)	645, 686, 1884, 1973
XceI	RCATGY	1 cut(s)	1573
XmaI	CCCGGG	1 cut(s)	784
XmnI	GAANNNNTTC	1 cut(s)	1698
XspI	CTAG	4 cut(s)	1127, 1370, 1598, 1650
Zsp2I	ATGCAT	1 cut(s)	1575

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.