Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0009432

Physical Location & Seq

Genomic Coordinates Reverse (-)

5619356 .. 5625850

Gene Structure 6495 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ16555

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2490 bp

ATGGCCTTCGCAACCGCCAAAATTTCCGAAATGCCACTCAGAAACTCACTCCCGCTCACCTCTCACTCCCCTTCCTCTCTCAACCTCCTCTTCTCGTCCCCAAAACTGTCATTTCACATCCTCAAGCCCTTCTCTGCTCTCAGAACCACCGAGCACGGCGGCAACCCGAACGCGAGGCCGTCGCCGCACAAGTCCAAGCCCTCGTCGTCCTCCTCCACCGCACCGTGGCTGAATAAGTGGCCGTCTCGCGGTGCTCCCTCGGAGTTGCCCCGCCATAAGGTCAACGATAGAGTCAAGGAGTCCAAGGGCGGTGGAGAGAAGCCGAGTAATGGCGCTAGGTACGTGGACAAGGACAAAGGCCAGAGCGCGATAGAGAGGATCGTGTTCCGGTTGCGGAACCTGGGGTTAGGCGACGAAGACGAGGAGGAGGAGAGCGGTGATGGTGTTGAATTGGACGGTCCGGATTCAATGCCGGCGGCGAGCGGAGAGGAGAAGCTCGGCGATTTGCTGCAGCGGGAGTGGGTCCGGCCGGACTATATATTGGTGGAGGAGAAGGGCGACGATGACGTGGCGCTGCCGTGGGAGAAGGAGGAGGAGGAGGAGGAATTGAGTGAGGATGAGGAGGTGAAGGGGCTGAGGAGAGCTCGGAGGTCGAAGGCGCCGAGCTTGGCTGAGCTGACGATTGAGGATGAGGAGCTGAGGCGATTGAGGAGGTTGGGAATGTTCCTGAGGGAGAGGATCAGTGTGCCGAAAGCCGGGATTACGCAGGCTGTGCTGGAGAAGATTCATGATAAGTGGAGGAAGGAGGAGCTGGTGAGGCTCAAGTTTCATGAGGTTTTGGCTCATGATATGAAGACTGCTCATGAGATTGTTGAGCGTCGAACAGGAGGTTTAGTTTTATGGAGATCAGGGAGTGTCATGGTTGTGTACCGTGGGATTAACTACAAAGGCCCTTCTAAATCCGAACCCGTTGGTAGGGAAGGAAATGCTCTTTTCATCCCAGATGTTTCATCAGCTGAAACTCCGGTAACAAGAAGTGGCAATGATGTGACTTCAACTCCAGATAAGACTGAGCAAGCTGTGAAAATTCCAGCACCTCTTCCGAAGATGACAGAGGAAGAAGCTGAATTCAACAGCTTATTGGATGAATTAGGTCCTCGTTTTGTTGAGTATTGGGGTACAGGAATACTTCCTGTTGACGCTGATTTACTTCCTAAAACAATCCCGGGTTACAAAACACCTTTCAGGCTTCTTCCTACCGGGATGCGATCACGGCTGACTAATGCAGAGATGACTAATTTGCGGAAACTTGCTAAATCAATTCCATGTCATTTTGCCCTTGGGAGAAATAGAAATCATCAAGGGTTAGCATCTGCAGTACTTAAAGTTTGGGAGAAAAGTTCCGTGGCGAAGATTGCTGTCAAACGAGGTATCCAGAATACAAACAACAAAATAATGGCTGAGGAGCTGAAGGCATTAACAGGTGGTGTTTTACTACTCAGAAACAAATATTACATTGTCATTTACCGTGGAAAGGACTTTATCCCAACAAGTGTAGCTGCTGCTCTGGCTGAAAGACAGGAACTAACGAAACAGGTTCAAGATGTGGAAGAGATAGTGCGTGTCAAACCAATAGATGCAGCTTCTTCAGGTACAGAGGAAGGACAGGCACTTGCAGGAACTTTGGCAGAGTTCTACGAGGCCCAAGCCCGATGGGGAAGAGAAATATCTGCTGAAGAACGTGAAAAGATGATTGAAGAAGATTCAAAAGCTAAGATTGCCAGGCGTGCAAAACGAATTGAACATAAGCTAGGCGTTGCCCAAGCTAAAAAGCTTAGAGCAGAGAGACTCCTATCCAAGATAGAATCAGCAATGCTTCCTGCAGGTCCTGATTATGATCAGGAAACCATCACTGATGAGGAGCGGGTTATGTTTCGCAGGGTTGGCTTAAGAATGAAAGCATACTTGCCTCTTGGCATACGTGGTGTCTTTGATGGTGTCATCGAAAACATGCATTTGCATTGGAAGCACAGAGAGCTAGTGAAATTAATATCCAAACAGAAGACCCTTGCTTTCGTTGAAGATTCAGCCCGGTTGTTGGAATATGAGAGCGGTGGCATACTGGTGGCTATAGAAAGAGTTCCCAAAGGATATGCTCTTATATACTATCGTGGAAAGAATTATAGGCGTCCCATTACCTTGAGGCCAAGGAACCTTTTAACTAAGGCGAAGGCATTGAAACGTTCGGTGGCCATGCAACGCCATGAGGCTCTCAGTCAGCACATCGGGGAATTGGAGAGGACCATAGAGCAAATGAGATCTGAAATTGGTATTTCTGAAGATGTAGAAAATGAGAGCACTTGGACCTCAAGAAATCCCCATCAGAGTGGTCATGACTCGGAATTTAACCAAAGTGAGGATGAAGCTTCTGACATGGAATCAGATGGTAGTGACGATGATGAAGGCTCAGATTGGGAAGATGAAGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000373 GO:0000375 GO:0000377 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0034641 GO:0043170 GO:0044237 GO:0044238 GO:0046483 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CRS1_YhbY

Protein Analysis

829

Amino Acids

93.24

Weight (kDa)

6.27

Isoelectric Point (pI)

58.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CRS1_YhbY	PF01985	229 - 311	4.6e-20	CRS1 / YhbY (CRM) domain
CRS1_YhbY	PF01985	426 - 510	4e-15	CRS1 / YhbY (CRM) domain
CRS1_YhbY	PF01985	637 - 724	1.4e-13	CRS1 / YhbY (CRM) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009432)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18390
fragaria_vesca	FvH4_5g12070 FvH4_5g12070 FvH4_5g12070 FvH4_5g12070
malus_domestica	MD06G1216600.v1.1 MD14G1227100.v1.1
prunus_persica	Prupe.5G221800_v2.0.a1
pyrus_communis	pycom06g19300 pycom14g18850
rosa_chinensis	RchiOBHm_Chr7g0185501
rosa_laevigata	RLG00000004907
rosa_multiflora	Rmu_sc0008223.1_g000008 Rmu_sc0010190.1_g000020 Rmu_sc0042727.1_g000001
rosa_roxburghii	Rroxscaffold_3G00268880
rosa_rugosa	Rorug06G0469800
rosa_samantha	Rh7AG072900 Rh7BG074700 Rh7CG074800 Rh7DG074700
rosa_wichuraiana	Rw7G006220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1874
AccB1I	GGYRCC	1 cut(s)	658
AccBSI	CCGCTC	5 cut(s)	55, 435, 483, 1924, 2112
AccII	CGCG	3 cut(s)	173, 249, 368
AccIII	TCCGGA	1 cut(s)	460
AclI	AACGTT	1 cut(s)	2242
AclWI	GGATC	2 cut(s)	386, 746
AcoI	YGGCCR	3 cut(s)	239, 527, 2250
AcsI	RAATTY	4 cut(s)	21, 1086, 1127, 2402
AcuI	CTGAAG	4 cut(s)	1490, 1632, 1755, 2358
AcyI	GRCGYC	2 cut(s)	659, 2188
AfaI	GTAC	5 cut(s)	341, 929, 1180, 1380, 1654
AfiI	CCNNNNNNNGG	9 cut(s)	225, 248, 277, 329, 755, 975, 1534, 2098, 2416
AflII	CTTAAG	1 cut(s)	1948
AjiI	CACGTC	1 cut(s)	568
AjnI	CCWGG	2 cut(s)	399, 1781
Alw21I	GWGCWC	4 cut(s)	156, 256, 646, 2360
Alw26I	GTCTC	2 cut(s)	249, 1840
AlwI	GGATC	2 cut(s)	386, 746
AlwNI	CAGNNNCTG	1 cut(s)	1889
Ama87I	CYCGRG	1 cut(s)	1225
Aor13HI	TCCGGA	1 cut(s)	460
AoxI	GGCC	9 cut(s)	3, 176, 239, 358, 527, 949, 1701, 2204, 2250
ApeKI	GCWGC	6 cut(s)	508, 511, 574, 1559, 1562, 1640
ApoI	RAATTY	4 cut(s)	21, 1086, 1127, 2402
AseI	ATTAAT	1 cut(s)	2048
Asp700I	GAANNNNTTC	1 cut(s)	2139
AspLEI	GCGC	4 cut(s)	335, 368, 574, 661
AspS9I	GGNCC	8 cut(s)	458, 523, 950, 1154, 1702, 1886, 2301, 2364
AsuC2I	CCSGG	5 cut(s)	757, 1226, 1227, 1261, 2092
AsuHPI	GGTGA	4 cut(s)	49, 449, 637, 826
AvaI	CYCGRG	1 cut(s)	1225
AvaII	GGWCC	6 cut(s)	458, 523, 1154, 1886, 2301, 2364
AxyI	CCTNAGG	1 cut(s)	728
BalI	TGGCCA	1 cut(s)	2252
BanI	GGYRCC	1 cut(s)	658
BanII	GRGCYC	1 cut(s)	646
BbsI	GAAGAC	3 cut(s)	423, 860, 2069
Bbv12I	GWGCWC	4 cut(s)	156, 256, 646, 2360
BbvCI	CCTCAGC	3 cut(s)	635, 698, 1461
BbvI	GCAGC	6 cut(s)	495, 523, 561, 1546, 1549, 1652
BccI	CCATC	6 cut(s)	434, 1707, 1916, 1988, 2388, 2438
BceAI	ACGGC	5 cut(s)	163, 172, 226, 562, 1289
BciT130I	CCWGG	2 cut(s)	401, 1783
BciVI	GTATCC	1 cut(s)	1442
BclI	TGATCA	1 cut(s)	1897
BcnI	CCSGG	5 cut(s)	757, 1226, 1227, 1261, 2092
BcoDI	GTCTC	2 cut(s)	249, 1840
BfaI	CTAG	3 cut(s)	336, 1811, 2039
BfmI	CTRYAG	4 cut(s)	509, 1374, 1881, 2130
BfoI	RGCGCY	3 cut(s)	336, 575, 662
BfrI	CTTAAG	1 cut(s)	1948
BfuAI	ACCTGC	1 cut(s)	1874
BfuI	GTATCC	1 cut(s)	1442
BglII	AGATCT	1 cut(s)	2318
BisI	GCNGC	9 cut(s)	160, 185, 477, 509, 512, 575, 1560, 1563, 1641
BlpI	GCTNAGC	1 cut(s)	672
BlsI	GCNGC	9 cut(s)	161, 186, 478, 510, 513, 576, 1561, 1564, 1642
BmcAI	AGTACT	1 cut(s)	1380
Bme1390I	CCNGG	7 cut(s)	401, 757, 1226, 1227, 1261, 1783, 2092
Bme18I	GGWCC	6 cut(s)	458, 523, 1154, 1886, 2301, 2364
BmeT110I	CYCGRG	1 cut(s)	1225
BmgBI	CACGTC	1 cut(s)	568
BmgT120I	GGNCC	8 cut(s)	458, 523, 950, 1154, 1702, 1886, 2301, 2364
BmiI	GGNNCC	4 cut(s)	398, 524, 660, 2213
BmrFI	CCNGG	7 cut(s)	401, 757, 1226, 1227, 1261, 1783, 2092
BmsI	GCATC	3 cut(s)	1254, 1379, 1627
BpiI	GAAGAC	3 cut(s)	423, 860, 2069
BplI	GAGNNNNNCTC	2 cut(s)	628, 660
BpmI	CTGGAG	2 cut(s)	797, 1044
Bpu10I	CCTNAGC	3 cut(s)	635, 698, 1461
Bpu1102I	GCTNAGC	1 cut(s)	672
BpuEI	CTTGAG	4 cut(s)	107, 806, 2221, 2353
BpuMI	CCSGG	5 cut(s)	757, 1226, 1227, 1261, 2092
BsaAI	YACGTR	2 cut(s)	343, 1982
BsaBI	GATNNNNATC	1 cut(s)	1896
BsaHI	GRCGYC	2 cut(s)	659, 2188
BsaWI	WCCGGW	3 cut(s)	387, 460, 1024
BsaXI	ACNNNNNCTCC	4 cut(s)	879, 909, 1042, 1072
Bsc4I	CCNNNNNNNGG	9 cut(s)	225, 248, 277, 329, 755, 975, 1534, 2098, 2416
Bse118I	RCCGGY	1 cut(s)	472
Bse1I	ACTGG	1 cut(s)	2127
Bse21I	CCTNAGG	1 cut(s)	728
Bse3DI	GCAATG	2 cut(s)	1048, 1878
Bse8I	GATNNNNATC	1 cut(s)	1896
BseAI	TCCGGA	1 cut(s)	460
BseBI	CCWGG	2 cut(s)	401, 1783
BseGI	GGATG	7 cut(s)	117, 622, 694, 996, 1150, 1269, 2425
BseJI	GATNNNNATC	1 cut(s)	1896
BseLI	CCNNNNNNNGG	9 cut(s)	225, 248, 277, 329, 755, 975, 1534, 2098, 2416
BseMI	GCAATG	2 cut(s)	1048, 1878
BseNI	ACTGG	1 cut(s)	2127
BseX3I	CGGCCG	1 cut(s)	527
BseXI	GCAGC	6 cut(s)	495, 523, 561, 1546, 1549, 1652
Bsh1236I	CGCG	3 cut(s)	173, 249, 368
Bsh1285I	CGRYCG	1 cut(s)	530
BshFI	GGCC	9 cut(s)	5, 178, 241, 360, 529, 951, 1703, 2206, 2252
BshNI	GGYRCC	1 cut(s)	658
BsiEI	CGRYCG	1 cut(s)	530
BsiHKAI	GWGCWC	4 cut(s)	156, 256, 646, 2360
BsiHKCI	CYCGRG	1 cut(s)	1225
BslFI	GGGAC	2 cut(s)	82, 2175
BslI	CCNNNNNNNGG	9 cut(s)	225, 248, 277, 329, 755, 975, 1534, 2098, 2416
BsmAI	GTCTC	2 cut(s)	249, 1840
BsmBI	CGTCTC	1 cut(s)	249
BsmFI	GGGAC	2 cut(s)	82, 2175
BsnI	GGCC	9 cut(s)	5, 178, 241, 360, 529, 951, 1703, 2206, 2252
BsoBI	CYCGRG	1 cut(s)	1225
Bsp1286I	GDGCHC	4 cut(s)	156, 256, 646, 2360
Bsp13I	TCCGGA	1 cut(s)	460
Bsp143I	GATC	6 cut(s)	378, 738, 905, 1268, 1897, 2318
Bsp1720I	GCTNAGC	1 cut(s)	672
BspANI	GGCC	9 cut(s)	5, 178, 241, 360, 529, 951, 1703, 2206, 2252
BspEI	TCCGGA	1 cut(s)	460
BspFNI	CGCG	3 cut(s)	173, 249, 368
BspHI	TCATGA	5 cut(s)	787, 829, 844, 862, 2392
BspLI	GGNNCC	4 cut(s)	398, 524, 660, 2213
BspMAI	CTGCAG	3 cut(s)	513, 1378, 1885
BspMI	ACCTGC	1 cut(s)	1874
BspPI	GGATC	2 cut(s)	386, 746
BspT107I	GGYRCC	1 cut(s)	658
BspTI	CTTAAG	1 cut(s)	1948
BsrBI	CCGCTC	5 cut(s)	55, 435, 483, 1924, 2112
BsrDI	GCAATG	2 cut(s)	1048, 1878
BsrFI	RCCGGY	1 cut(s)	472
BsrI	ACTGG	1 cut(s)	2127
BssAI	RCCGGY	1 cut(s)	472
BssMI	GATC	6 cut(s)	378, 738, 905, 1268, 1897, 2318
BssNI	GRCGYC	2 cut(s)	659, 2188
BssT1I	CCWWGG	3 cut(s)	303, 1339, 2207
Bst2UI	CCWGG	2 cut(s)	401, 1783
Bst4CI	ACNGT	5 cut(s)	108, 225, 458, 932, 1529
Bst6I	CTCTTC	4 cut(s)	95, 1104, 1605, 1714
BstACI	GRCGYC	2 cut(s)	659, 2188
BstAFI	CTTAAG	1 cut(s)	1948
BstAPI	GCANNNNNTGC	1 cut(s)	772
BstBAI	YACGTR	2 cut(s)	343, 1982
BstC8I	GCNNGC	5 cut(s)	474, 481, 768, 1077, 1788
BstDSI	CCRYGG	5 cut(s)	224, 578, 931, 1404, 1528
BstF5I	GGATG	7 cut(s)	117, 622, 694, 996, 1150, 1269, 2425
BstFNI	CGCG	3 cut(s)	173, 249, 368
BstH2I	RGCGCY	3 cut(s)	336, 575, 662
BstHHI	GCGC	4 cut(s)	335, 368, 574, 661
BstKTI	GATC	6 cut(s)	381, 741, 908, 1271, 1900, 2321
BstMAI	GTCTC	2 cut(s)	249, 1840
BstMBI	GATC	6 cut(s)	378, 738, 905, 1268, 1897, 2318
BstMCI	CGRYCG	1 cut(s)	530
BstNI	CCWGG	2 cut(s)	401, 1783
BstNSI	RCATGY	1 cut(s)	2014
BstSCI	CCNGG	7 cut(s)	399, 755, 1224, 1225, 1259, 1781, 2090
BstSFI	CTRYAG	4 cut(s)	509, 1374, 1881, 2130
BstUI	CGCG	3 cut(s)	173, 249, 368
BstV1I	GCAGC	6 cut(s)	495, 523, 561, 1546, 1549, 1652
BstV2I	GAAGAC	3 cut(s)	423, 860, 2069
BstX2I	RGATCY	1 cut(s)	2318
BstXI	CCANNNNNNTGG	1 cut(s)	2387
BstYI	RGATCY	1 cut(s)	2318
BstZI	CGGCCG	1 cut(s)	527
Bsu36I	CCTNAGG	1 cut(s)	728
BsuI	GTATCC	1 cut(s)	1442
BsuRI	GGCC	9 cut(s)	5, 178, 241, 360, 529, 951, 1703, 2206, 2252
BtgI	CCRYGG	5 cut(s)	224, 578, 931, 1404, 1528
BtrI	CACGTC	1 cut(s)	568
BtsCI	GGATG	7 cut(s)	117, 622, 694, 996, 1150, 1269, 2425
BtsIMutI	CAGTG	2 cut(s)	748, 1911
BveI	ACCTGC	1 cut(s)	1874
Cac8I	GCNNGC	5 cut(s)	474, 481, 768, 1077, 1788
CaiI	CAGNNNCTG	1 cut(s)	1889
CciI	TCATGA	5 cut(s)	787, 829, 844, 862, 2392
CfoI	GCGC	4 cut(s)	335, 368, 574, 661
Cfr10I	RCCGGY	1 cut(s)	472
Cfr13I	GGNCC	8 cut(s)	458, 523, 950, 1154, 1702, 1886, 2301, 2364
Cfr9I	CCCGGG	1 cut(s)	1225
CpoI	CGGWCCG	1 cut(s)	458
CseI	GACGC	3 cut(s)	866, 1208, 2177
Csp6I	GTAC	5 cut(s)	340, 928, 1179, 1379, 1653
CspCI	CAANNNNNGTGG	2 cut(s)	292, 327
CspI	CGGWCCG	1 cut(s)	458
CviQI	GTAC	5 cut(s)	340, 928, 1179, 1379, 1653
DinI	GGCGCC	1 cut(s)	660
DpnI	GATC	6 cut(s)	380, 740, 907, 1270, 1899, 2320
DpnII	GATC	6 cut(s)	378, 738, 905, 1268, 1897, 2318
EaeI	YGGCCR	3 cut(s)	239, 527, 2250
EagI	CGGCCG	1 cut(s)	527
Eam1104I	CTCTTC	4 cut(s)	95, 1104, 1605, 1714
EarI	CTCTTC	4 cut(s)	95, 1104, 1605, 1714
Ecl136II	GAGCTC	1 cut(s)	644
EclXI	CGGCCG	1 cut(s)	527
Eco130I	CCWWGG	3 cut(s)	303, 1339, 2207
Eco24I	GRGCYC	1 cut(s)	646
Eco47I	GGWCC	6 cut(s)	458, 523, 1154, 1886, 2301, 2364
Eco52I	CGGCCG	1 cut(s)	527
Eco53kI	GAGCTC	1 cut(s)	644
Eco57I	CTGAAG	4 cut(s)	1490, 1632, 1755, 2358
Eco81I	CCTNAGG	1 cut(s)	728
Eco88I	CYCGRG	1 cut(s)	1225
EcoICRI	GAGCTC	1 cut(s)	644
EcoO109I	RGGNCCY	3 cut(s)	950, 1154, 1886
EcoRI	GAATTC	1 cut(s)	1127
EcoRII	CCWGG	2 cut(s)	399, 1781
EcoT14I	CCWWGG	3 cut(s)	303, 1339, 2207
EcoT22I	ATGCAT	1 cut(s)	2016
EcoT38I	GRGCYC	1 cut(s)	646
EgeI	GGCGCC	1 cut(s)	660
EheI	GGCGCC	1 cut(s)	660
ErhI	CCWWGG	3 cut(s)	303, 1339, 2207
Esp3I	CGTCTC	1 cut(s)	249
FaqI	GGGAC	2 cut(s)	82, 2175
FauI	CCCGC	4 cut(s)	60, 278, 507, 1917
FbaI	TGATCA	1 cut(s)	1897
Fnu4HI	GCNGC	9 cut(s)	160, 185, 477, 509, 512, 575, 1560, 1563, 1641
FokI	GGATG	7 cut(s)	104, 629, 701, 983, 1157, 1276, 2432
FriOI	GRGCYC	1 cut(s)	646
Fsp4HI	GCNGC	9 cut(s)	160, 185, 477, 509, 512, 575, 1560, 1563, 1641
FspBI	CTAG	3 cut(s)	336, 1811, 2039
GlaI	GCGC	4 cut(s)	334, 367, 573, 660
GluI	GCNGC	9 cut(s)	160, 185, 477, 509, 512, 575, 1560, 1563, 1641
GsuI	CTGGAG	2 cut(s)	797, 1044
HaeII	RGCGCY	3 cut(s)	336, 575, 662
HaeIII	GGCC	9 cut(s)	5, 178, 241, 360, 529, 951, 1703, 2206, 2252
HgaI	GACGC	3 cut(s)	866, 1208, 2177
HhaI	GCGC	4 cut(s)	335, 368, 574, 661
Hin1I	GRCGYC	2 cut(s)	659, 2188
Hin6I	GCGC	4 cut(s)	333, 366, 572, 659
HinP1I	GCGC	4 cut(s)	333, 366, 572, 659
HincII	GTYRAC	2 cut(s)	283, 1198
HindII	GTYRAC	2 cut(s)	283, 1198
HindIII	AAGCTT	2 cut(s)	1832, 2424
HphI	GGTGA	4 cut(s)	49, 449, 637, 826
Hpy166II	GTNNAC	4 cut(s)	283, 346, 928, 1198
Hpy8I	GTNNAC	4 cut(s)	283, 346, 928, 1198
Hpy99I	CGWCG	5 cut(s)	184, 208, 416, 563, 882
HpyCH4III	ACNGT	5 cut(s)	108, 225, 458, 932, 1529
HpyCH4IV	ACGT	5 cut(s)	342, 567, 1741, 1981, 2242
HpySE526I	ACGT	5 cut(s)	342, 567, 1741, 1981, 2242
Hsp92I	GRCGYC	2 cut(s)	659, 2188
HspAI	GCGC	4 cut(s)	333, 366, 572, 659
KasI	GGCGCC	1 cut(s)	658
Kpn2I	TCCGGA	1 cut(s)	460
KroI	GCCGGC	1 cut(s)	472
KroNI	GCCGGC	1 cut(s)	474
Ksp22I	TGATCA	1 cut(s)	1897
Kzo9I	GATC	6 cut(s)	378, 738, 905, 1268, 1897, 2318
LmnI	GCTCC	5 cut(s)	259, 694, 808, 1465, 1921
Lsp1109I	GCAGC	6 cut(s)	495, 523, 561, 1546, 1549, 1652
LweI	GCATC	3 cut(s)	1254, 1379, 1627
MaeI	CTAG	3 cut(s)	336, 1811, 2039
MaeII	ACGT	5 cut(s)	342, 567, 1741, 1981, 2242
MaeIII	GTNAC	4 cut(s)	1027, 1048, 1229, 2450
MalI	GATC	6 cut(s)	380, 740, 907, 1270, 1899, 2320
MbiI	CCGCTC	5 cut(s)	55, 435, 483, 1924, 2112
MboI	GATC	6 cut(s)	378, 738, 905, 1268, 1897, 2318
MflI	RGATCY	1 cut(s)	2318
MhlI	GDGCHC	4 cut(s)	156, 256, 646, 2360
MlsI	TGGCCA	1 cut(s)	2252
MluNI	TGGCCA	1 cut(s)	2252
Mly113I	GGCGCC	1 cut(s)	659
MlyI	GAGTC	4 cut(s)	300, 308, 1842, 2390
MmeI	TCCRAC	1 cut(s)	2079
Mox20I	TGGCCA	1 cut(s)	2252
Mph1103I	ATGCAT	1 cut(s)	2016
MroI	TCCGGA	1 cut(s)	460
MroNI	GCCGGC	1 cut(s)	472
MroXI	GAANNNNTTC	1 cut(s)	2139
MscI	TGGCCA	1 cut(s)	2252
MseI	TTAA	8 cut(s)	939, 1383, 1478, 1949, 2048, 2219, 2406, 2488
MslI	CAYNNNNRTG	3 cut(s)	923, 2123, 2385
Msp20I	TGGCCA	1 cut(s)	2252
MspA1I	CMGCKG	2 cut(s)	514, 1016
MspCI	CTTAAG	1 cut(s)	1948
MspR9I	CCNGG	7 cut(s)	401, 757, 1226, 1227, 1261, 1783, 2092
MvaI	CCWGG	2 cut(s)	401, 1783
MvnI	CGCG	3 cut(s)	173, 249, 368
NaeI	GCCGGC	1 cut(s)	474
NarI	GGCGCC	1 cut(s)	659
NciI	CCSGG	5 cut(s)	757, 1226, 1227, 1261, 2092
NdeII	GATC	6 cut(s)	378, 738, 905, 1268, 1897, 2318
NgoMIV	GCCGGC	1 cut(s)	472
NlaIV	GGNNCC	4 cut(s)	398, 524, 660, 2213
NmeAIII	GCCGAG	3 cut(s)	348, 477, 687
NmuCI	GTSAC	2 cut(s)	1048, 2450
NsiI	ATGCAT	1 cut(s)	2016
NspI	RCATGY	1 cut(s)	2014
PagI	TCATGA	5 cut(s)	787, 829, 844, 862, 2392
PcsI	WCGNNNNNNNCGW	1 cut(s)	659
PdiI	GCCGGC	1 cut(s)	474
PdmI	GAANNNNTTC	1 cut(s)	2139
PfeI	GAWTC	6 cut(s)	464, 784, 1763, 1865, 2084, 2438
PkrI	GCNGC	9 cut(s)	161, 186, 478, 510, 513, 576, 1561, 1564, 1642
PleI	GAGTC	4 cut(s)	299, 307, 1842, 2390
PluTI	GGCGCC	1 cut(s)	662
PpsI	GAGTC	4 cut(s)	299, 307, 1842, 2390
Ppu21I	YACGTR	2 cut(s)	343, 1982
PpuMI	RGGWCCY	2 cut(s)	1154, 1886
PshBI	ATTAAT	1 cut(s)	2048
Psp124BI	GAGCTC	1 cut(s)	646
Psp1406I	AACGTT	1 cut(s)	2242
Psp5II	RGGWCCY	2 cut(s)	1154, 1886
Psp6I	CCWGG	2 cut(s)	399, 1781
PspGI	CCWGG	2 cut(s)	399, 1781
PspN4I	GGNNCC	4 cut(s)	398, 524, 660, 2213
PspPI	GGNCC	8 cut(s)	458, 523, 950, 1154, 1702, 1886, 2301, 2364
PspPPI	RGGWCCY	2 cut(s)	1154, 1886
PstI	CTGCAG	3 cut(s)	513, 1378, 1885
PstNI	CAGNNNCTG	1 cut(s)	1889
PsuI	RGATCY	1 cut(s)	2318
PvuII	CAGCTG	1 cut(s)	1016
RsaI	GTAC	5 cut(s)	341, 929, 1180, 1380, 1654
RsaNI	GTAC	5 cut(s)	340, 928, 1179, 1379, 1653
RseI	CAYNNNNRTG	3 cut(s)	923, 2123, 2385
Rsr2I	CGGWCCG	1 cut(s)	458
RsrII	CGGWCCG	1 cut(s)	458
SacI	GAGCTC	1 cut(s)	646
SaqAI	TTAA	8 cut(s)	939, 1383, 1478, 1949, 2048, 2219, 2406, 2488
SatI	GCNGC	9 cut(s)	160, 185, 477, 509, 512, 575, 1560, 1563, 1641
Sau3AI	GATC	6 cut(s)	378, 738, 905, 1268, 1897, 2318
Sau96I	GGNCC	8 cut(s)	458, 523, 950, 1154, 1702, 1886, 2301, 2364
SbfI	CCTGCAGG	1 cut(s)	1885
ScaI	AGTACT	1 cut(s)	1380
SchI	GAGTC	4 cut(s)	300, 308, 1842, 2390
ScrFI	CCNGG	7 cut(s)	401, 757, 1226, 1227, 1261, 1783, 2092
SdaI	CCTGCAGG	1 cut(s)	1885
SduI	GDGCHC	4 cut(s)	156, 256, 646, 2360
SfaNI	GCATC	3 cut(s)	1254, 1379, 1627
SfcI	CTRYAG	4 cut(s)	509, 1374, 1881, 2130
SfoI	GGCGCC	1 cut(s)	660
SinI	GGWCC	6 cut(s)	458, 523, 1154, 1886, 2301, 2364
SmaI	CCCGGG	1 cut(s)	1227
SmiMI	CAYNNNNRTG	3 cut(s)	923, 2123, 2385
SmlI	CTYRAG	5 cut(s)	122, 821, 1948, 2200, 2368
SmoI	CTYRAG	5 cut(s)	122, 821, 1948, 2200, 2368
Sse8387I	CCTGCAGG	1 cut(s)	1885
SspDI	GGCGCC	1 cut(s)	658
SspI	AATATT	1 cut(s)	1511
SspMI	CTAG	3 cut(s)	336, 1811, 2039
SstI	GAGCTC	1 cut(s)	646
StyD4I	CCNGG	7 cut(s)	399, 755, 1224, 1225, 1259, 1781, 2090
StyI	CCWWGG	3 cut(s)	303, 1339, 2207
TaaI	ACNGT	5 cut(s)	108, 225, 458, 932, 1529
TaiI	ACGT	5 cut(s)	345, 570, 1744, 1984, 2245
TaqI	TCGA	3 cut(s)	653, 880, 2004
TatI	WGTACW	1 cut(s)	1378
TauI	GCSGC	3 cut(s)	162, 187, 479
TfiI	GAWTC	6 cut(s)	464, 784, 1763, 1865, 2084, 2438
Tru1I	TTAA	8 cut(s)	939, 1383, 1478, 1949, 2048, 2219, 2406, 2488
Tru9I	TTAA	8 cut(s)	939, 1383, 1478, 1949, 2048, 2219, 2406, 2488
TscAI	CASTG	2 cut(s)	748, 1918
TseFI	GTSAC	2 cut(s)	1048, 2450
TseI	GCWGC	6 cut(s)	508, 511, 574, 1559, 1562, 1640
Tsp45I	GTSAC	2 cut(s)	1048, 2450
TspDTI	ATGAA	9 cut(s)	776, 818, 866, 985, 999, 1161, 1970, 2436, 2475
TspGWI	ACGGA	1 cut(s)	1393
TspMI	CCCGGG	1 cut(s)	1225
TspRI	CASTG	2 cut(s)	748, 1918
Vha464I	CTTAAG	1 cut(s)	1948
VpaK11BI	GGWCC	6 cut(s)	458, 523, 1154, 1886, 2301, 2364
VspI	ATTAAT	1 cut(s)	2048
XapI	RAATTY	4 cut(s)	21, 1086, 1127, 2402
XceI	RCATGY	1 cut(s)	2014
XmaI	CCCGGG	1 cut(s)	1225
XmnI	GAANNNNTTC	1 cut(s)	2139
XspI	CTAG	3 cut(s)	336, 1811, 2039
ZrmI	AGTACT	1 cut(s)	1380
Zsp2I	ATGCAT	1 cut(s)	2016

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.